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Nourry J, Chevalier P, Laurenceau E, Cattoen X, Bertrand X, Peres B, Oukacine F, Peyrin E, Choisnard L. Whole-cell aptamer-based techniques for rapid bacterial detection: Alternatives to traditional methods. J Pharm Biomed Anal 2025; 255:116661. [PMID: 39793371 DOI: 10.1016/j.jpba.2025.116661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2024] [Revised: 12/18/2024] [Accepted: 01/03/2025] [Indexed: 01/13/2025]
Abstract
Controlling the spread of bacterial infectious diseases is a major public health issue, particularly in view of the pandemic of bacterial resistance to antibiotics. In this context, the detection and identification of pathogenic bacteria is a prerequisite for the implementation of control measures. Current reference methods are mainly based on culture methods, which generate a delay in obtaining a result and requires equipment. Consequently, focusing on the detection of the whole bacterium represents a very attractive alternative, since no culture is required. Several techniques have already been deployed to identify whole-cell bacteria. In recent decades, growing interest in nucleic acid aptamers has emerged as a viable alternative to antibodies as recognition elements, offering preferable stability, cost-efficiency, good specificity and affinity. This review explores current alternative methods for the detection of whole-cell bacteria, with particular emphasis on aptamer-based assays. These assays have shown promising results in various transduction mechanisms, including optical, electrochemical, and mechanical approaches, enhancing their versatility in different diagnostic platforms. The integration of aptamers in these detection methods offers rapid, sensitive, versatile and portable solutions for pathogen identification, positioning them as valuable tools in the fight against bacterial infections.
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Affiliation(s)
- Juliette Nourry
- University Grenoble Alpes, DPM UMR 5063, CNRS, Grenoble F-38041, France
| | - Pauline Chevalier
- University Grenoble Alpes, DPM UMR 5063, CNRS, Grenoble F-38041, France
| | - Emmanuelle Laurenceau
- University Lyon, University Claude Bernard Lyon 1, INL UMR5270, Ecole Centrale Lyon, CNRS, INSA Lyon, CPE Lyon, Ecully F-69130, France
| | - Xavier Cattoen
- University Grenoble Alpes, Grenoble INP, Institut Néel, CNRS, Grenoble F-38000, France
| | - Xavier Bertrand
- University Bourgogne Franche-Comté, Chrono-environnement, UMR 6249, CNRS, France
| | - Basile Peres
- University Grenoble Alpes, DPM UMR 5063, CNRS, Grenoble F-38041, France
| | - Farid Oukacine
- University Grenoble Alpes, DPM UMR 5063, CNRS, Grenoble F-38041, France
| | - Eric Peyrin
- University Grenoble Alpes, DPM UMR 5063, CNRS, Grenoble F-38041, France.
| | - Luc Choisnard
- University Grenoble Alpes, DPM UMR 5063, CNRS, Grenoble F-38041, France.
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Ahangari A, Mahmoodi P, Zolfigol MA, Mohammadzadeh A, Salouti M. Rapid detection of Brucella cells using a gold nanoparticle-based aptasensor via a simple colorimetric method. BMC Vet Res 2024; 20:513. [PMID: 39533298 PMCID: PMC11558872 DOI: 10.1186/s12917-024-04370-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Accepted: 11/05/2024] [Indexed: 11/16/2024] Open
Abstract
BACKGROUND Brucellosis is a major worldwide zoonotic disease that is caused by Brucella spp. and threatens the health of communities. Novel methods for rapid detection of Brucella bacteria are beneficial and necessary in preventing infection and subsequent economic losses. Constructing biosensors with nanoparticles is a promising approach for identification of pathogenic bacteria in a short time. This study aimed to introduce a new detection method of Brucella cells using a biosensor, based on gold nanoparticles and a specific aptamer, via a colorimetric reaction. In this work, gold nanoparticles (GNPs) were synthesized and attached to the aptamer through electrostatic bonding. The binding of aptamer to gold nanoparticles was confirmed by Uv/vis spectrophotometry, FT-IR, transmission electron microscope (TEM) and zeta sizer (DLS). RESULTS In the presence of the bacterial cells, aptamers were bound to their targets, and the surfaces of the nanoparticles were depleted from aptamers resulting in intensified peroxidation activity of GNPs, and with the addition of 3, 3', 5, 5'-tetramethylbenzidine (TMB), the color of the solution was changed from red to purple, which indicated the presence of Brucella. The sensitivity of the aptasensor was investigated using different concentrations of Brucella cells and its specificity was confirmed against several species of bacteria. The results showed that the designed aptasensor was more sensitive compared to PCR assay method with the ability to detect 1.5 × 101 CFU/mL of the bacterial cells. CONCLUSION These findings indicate that the designed aptasensor can be used as a simple and rapid diagnostic tool to detect Brucella cells without need to experts and expensive laboratory equipment.
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Affiliation(s)
- Azam Ahangari
- Department of Pathobiology, Faculty of Veterinary Medicine, Bu-Ali Sina University, Hamedan, Iran
| | - Pezhman Mahmoodi
- Department of Pathobiology, Faculty of Veterinary Medicine, Bu-Ali Sina University, Hamedan, Iran.
| | - Mohammad Ali Zolfigol
- Department of Organic Chemistry, Faculty of Chemistry, Bu-Ali Sina University, Hamedan, Iran
| | - Abdolmajid Mohammadzadeh
- Department of Pathobiology, Faculty of Veterinary Medicine, Bu-Ali Sina University, Hamedan, Iran
| | - Mojtaba Salouti
- Nanobiotechnology Research Center, Zanjan Branch, Islamic Azad University, Zanjan, Iran
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Karthikeyan M, Rathinasabapathi P. A Label-Free Colorimetric AuNP-Aptasensor for the Rapid Detection of Vibrio cholerae O139. Cell Mol Bioeng 2024; 17:229-241. [PMID: 39050512 PMCID: PMC11263534 DOI: 10.1007/s12195-024-00804-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 05/28/2024] [Indexed: 07/27/2024] Open
Abstract
Purpose Waterborne pathogens pose a significant threat to public health, emphasizing the continuous necessity for advancing robust detection techniques, particularly in preventing outbreaks associated with these pathogens. This study focuses on cholera, an infectious disease caused by Vibrio cholerae, serogroups O1 and O139, often transmitted through contaminated water and food, raising significant public health concerns in areas with poor sanitation and limited access to clean water. Methods We developed a colorimetric biosensor using aptamer-functionalized gold nanoparticles to identify Vibrio cholerae O139 and address this issue. The detection mechanism relies on the color change of gold nanoparticles (AuNPs) from red to blue-purple induced by NaCl after the pathogen incubation and aptamer-target binding. Initial steps involved synthesizing and characterizing AuNPs, then exploring the impact of aptamer and NaCl concentrations on AuNP agglomeration. Optimization procedures for aptamer concentration and salt addition identified the optimal conditions for detection as 120 pM aptamers and 1 M NaCl. Results The aptasensor demonstrated a robust linear relationship, detecting V. cholerae concentrations from 103 to 108 CFU/mL, with a limit of detection (LOD) of 587 CFU/mL. Specificity tests and accurate sample analyses confirmed the efficiency of the AuNPs aptasensor, showcasing its reliability and speed compared to traditional culture examination methods. Moreover, we extended the aptasensor to a paper-based sensing platform with similar detection principles. Conclusion The change in color upon target binding was captured with a smartphone and analyzed using image processing software. The paper-based device detected the target in less than 2 min, demonstrating its convenience for on-field applications.
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Affiliation(s)
- Masilamani Karthikeyan
- Department of Genetic Engineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603 203 India
| | - Pasupathi Rathinasabapathi
- Department of Genetic Engineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603 203 India
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Schmitz FRW, Cesca K, Valério A, de Oliveira D, Hotza D. Colorimetric detection of Pseudomonas aeruginosa by aptamer-functionalized gold nanoparticles. Appl Microbiol Biotechnol 2022; 107:71-80. [DOI: 10.1007/s00253-022-12283-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Revised: 11/02/2022] [Accepted: 11/08/2022] [Indexed: 11/25/2022]
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Daramola OB, Omole RK, Akinwale IV, Otuyelu FO, Akinsanola BA, Fadare TO, George RC, Torimiro N. Bio-Receptors Functionalized Nanoparticles: A Resourceful Sensing and Colorimetric Detection Tool for Pathogenic Bacteria and Microbial Biomolecules. FRONTIERS IN NANOTECHNOLOGY 2022. [DOI: 10.3389/fnano.2022.885803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Pathogenic bacteria and several biomolecules produced by cells and living organisms are common biological components posing a harmful threat to global health. Several studies have devised methods for the detection of varying pathogenic bacteria and biomolecules in different settings such as food, water, soil, among others. Some of the detection studies highlighting target pathogenic bacteria and biomolecules, mechanisms of detection, colorimetric outputs, and detection limits have been summarized in this review. In the last 2 decades, studies have harnessed various nanotechnology-based methods for the detection of pathogenic bacteria and biomolecules with much attention on functionalization techniques. This review considers the detection mechanisms, colorimetric prowess of bio-receptors and compares the reported detection efficiency for some bio-receptor functionalized nanoparticles. Some studies reported visual, rapid, and high-intensity colorimetric detection of pathogenic bacteria and biomolecules at a very low concentration of the analyte. Other studies reported slight colorimetric detection only with a large concentration of an analyte. The effectiveness of bio-receptor functionalized nanoparticles as detection component varies depending on their selectivity, specificity, and the binding interaction exhibited by nanoparticles, bio-receptor, and analytes to form a bio-sensing complex. It is however important to note that the colorimetric properties of some bio-receptor functionalized nanoparticles have shown strong and brilliant potential for real-time and visual-aided diagnostic results, not only to assess food and water quality but also for environmental monitoring of pathogenic bacteria and a wide array of biomolecules.
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Shen Y, Xu L, Li Y. Biosensors for rapid detection of Salmonella in food: A review. Compr Rev Food Sci Food Saf 2020; 20:149-197. [PMID: 33443806 DOI: 10.1111/1541-4337.12662] [Citation(s) in RCA: 97] [Impact Index Per Article: 19.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2020] [Revised: 09/04/2020] [Accepted: 10/01/2020] [Indexed: 12/13/2022]
Abstract
Salmonella is one of the main causes of foodborne infectious diseases, posing a serious threat to public health. It can enter the food supply chain at various stages of production, processing, distribution, and marketing. High prevalence of Salmonella necessitates efficient and effective approaches for its identification, detection, and monitoring at an early stage. Because conventional methods based on plate counting and real-time polymerase chain reaction are time-consuming and laborious, novel rapid detection methods are urgently needed for in-field and on-line applications. Biosensors provide many advantages over conventional laboratory assays in terms of sensitivity, specificity, and accuracy, and show superiority in rapid response and potential portability. They are now recognized as promising alternative tools and one of the most on-site applicable and end user-accessible methods for rapid detection. In recent years, we have witnessed a flourishing of studies in the development of robust and elaborate biosensors for detection of Salmonella in food. This review aims to provide a comprehensive overview on Salmonella biosensors by highlighting different signal-transducing mechanisms (optical, electrochemical, piezoelectric, etc.) and critically analyzing its recent trends, particularly in combination with nanomaterials, microfluidics, portable instruments, and smartphones. Furthermore, current challenges are emphasized and future perspectives are discussed.
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Affiliation(s)
- Yafang Shen
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, China.,Department of Biological and Agricultural Engineering, University of Arkansas, Fayetteville, Arkansas
| | - Lizhou Xu
- Department of Materials, Imperial College London, London, UK
| | - Yanbin Li
- Department of Biological and Agricultural Engineering, University of Arkansas, Fayetteville, Arkansas
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Feng J, Zhu Q, Wang Y. Colorimetric detection of Gadidae species using probe-modified gold nanoparticles. Food Control 2020. [DOI: 10.1016/j.foodcont.2020.107287] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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McConnell EM, Morrison D, Rey Rincon MA, Salena BJ, Li Y. Selection and applications of synthetic functional DNAs for bacterial detection. Trends Analyt Chem 2020. [DOI: 10.1016/j.trac.2019.115785] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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Jia H, Draz MS, Ruan Z. Functional Nanomaterials for the Detection and Control of Bacterial Infections. Curr Top Med Chem 2020; 19:2449-2475. [PMID: 31642781 DOI: 10.2174/1568026619666191023123407] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2019] [Revised: 08/11/2019] [Accepted: 09/13/2019] [Indexed: 12/20/2022]
Abstract
Infections with multidrug-resistant bacteria that are difficult to treat with commonly used antibiotics have spread globally, raising serious public health concerns. Conventional bacterial detection techniques are time-consuming, which may delay treatment for critically ill patients past the optimal time. There is an urgent need for rapid and sensitive diagnosis and effective treatments for multidrug-resistant pathogenic bacterial infections. Advances in nanotechnology have made it possible to design and build nanomaterials with therapeutic and diagnostic capabilities. Functional nanomaterials that can specifically interact with bacteria offer additional options for the diagnosis and treatment of infections due to their unique physical and chemical properties. Here, we summarize the recent advances related to the preparation of nanomaterials and their applications for the detection and treatment of bacterial infection. We pay particular attention to the toxicity of therapeutic nanoparticles based on both in vitro and in vivo assays. In addition, the major challenges that require further research and future perspectives are briefly discussed.
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Affiliation(s)
- Huiqiong Jia
- Department of Clinical Laboratory, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, China
| | - Mohamed S Draz
- Division of Engineering in Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, United States.,Department of Medicine, Harvard Medical School, Boston, MA 02115, United States
| | - Zhi Ruan
- Department of Clinical Laboratory, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, China
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Feng J, Shen Q, Wu J, Dai Z, Wang Y. Naked-eyes detection of Shigella flexneri in food samples based on a novel gold nanoparticle-based colorimetric aptasensor. Food Control 2019. [DOI: 10.1016/j.foodcont.2018.11.048] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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Vinci G, Rapa M. Noble Metal Nanoparticles Applications: Recent Trends in Food Control. Bioengineering (Basel) 2019; 6:bioengineering6010010. [PMID: 30669604 PMCID: PMC6466389 DOI: 10.3390/bioengineering6010010] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Revised: 01/15/2019] [Accepted: 01/19/2019] [Indexed: 02/01/2023] Open
Abstract
Scientific research in the nanomaterials field is constantly evolving, making it possible to develop new materials and above all to find new applications. Therefore, nanoparticles (NPs) are suitable for different applications: nanomedicine, drug delivery, sensors, optoelectronics and food control. This review explores the recent trend in food control of using noble metallic nanoparticles as determination tools. Two major uses of NPs in food control have been found: the determination of contaminants and bioactive compounds. Applications were found for the determination of mycotoxins, pesticides, drug residues, allergens, probable carcinogenic compounds, bacteria, amino acids, gluten and antioxidants. The new developed methods are competitive for their use in food control, demonstrated by their validation and application to real samples.
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Affiliation(s)
- Giuliana Vinci
- Laboratory of Commodity Sciences, Department of Management, Sapienza University of Rome, via del Castro Laurenziano 9, 00161 Rome, Italy.
| | - Mattia Rapa
- Laboratory of Commodity Sciences, Department of Management, Sapienza University of Rome, via del Castro Laurenziano 9, 00161 Rome, Italy.
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