Osman Mohamed A, Suliman Mohamed M, Abdelrahman Hussain M, Fatahalrahman Ahmed I. Detection of antifungal drug-resistant and
ERG11 gene mutations among clinical isolates of
Candida species isolated from Khartoum, Sudan.
F1000Res 2020;
9:1050. [PMID:
34035903 PMCID:
PMC8114185 DOI:
10.12688/f1000research.24854.2]
[Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 01/22/2021] [Indexed: 11/20/2022] Open
Abstract
Background:
Candida species are one of the most important opportunistic fungal pathogens that cause both superficial and systemic infections, especially in immunocompromised individuals. Considering the sharp increase in the rate of
Candida infections, and resistance to commonly used antifungal agents in the last decades; this study was conducted to determine the rate of resistance among clinical isolates of
Candida species, and to characterize some of the resistant genes among resistant isolates collected in Khartoum.
Methods: This is a cross-sectional laboratory-based study included 100 pre-screened
Candida species isolates from Khartoum state hospitals. Chromogenic media was used for
Candida isolation and/or identification. The standard disc diffusion method was performed to investigate the susceptibility to fluconazole, itraconazole, and amphotericin. Following genomic DNA extraction, the entire
ERG11 gene was amplified from some
C. albicans resistant isolates, sequenced, and further analyzed.
Results: Out of 100 clinical isolates collected, 51% were
C. albicans, followed by
C. glabrata (31%),
C. krusie (8%),
C. tropicals (5%), and
C. dupliniens (5%). Resistance rate was 23% for fluconazole, 4% for itraconazole, while there were no amphotericin resistant isolates detected.
C. albicans
ERG11 gene sequence reveals 15 different mutations. Among these, three (D116E, E266D, and V488I) were missense mutations; however, these substitutions do not contribute to fluconazole resistance.
Conclusion:
C. albicans was found to be the most common species. Resistance against fluconazole was observed most frequently; however, mutations in
ERG11 are unlikely to be the reason behind fluconazole resistance among these isolates.
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