1
|
Stevens MCA, Faulkner SC, Wilke ABB, Beier JC, Vasquez C, Petrie WD, Fry H, Nichols RA, Verity R, Le Comber SC. Spatially clustered count data provide more efficient search strategies in invasion biology and disease control. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2021; 31:e02329. [PMID: 33752255 DOI: 10.1002/eap.2329] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Revised: 10/23/2020] [Accepted: 12/06/2020] [Indexed: 06/12/2023]
Abstract
Geographic profiling, a mathematical model originally developed in criminology, is increasingly being used in ecology and epidemiology. Geographic profiling boasts a wide range of applications, such as finding source populations of invasive species or breeding sites of vectors of infectious disease. The model provides a cost-effective approach for prioritizing search strategies for source locations and does so via simple data in the form of the positions of each observation, such as individual sightings of invasive species or cases of a disease. In doing so, however, classic geographic profiling approaches fail to make the distinction between those areas containing observed absences and those areas where no data were recorded. Absence data are generated via spatial sampling protocols but are often discarded during the inference process. Here we construct a geographic profiling model that resolves these issues by making inferences via count data, analyzing a set of discrete sentinel locations at which the number of encounters has been recorded. Crucially, in our model this number can be zero. We verify the ability of this new model to estimate source locations and other parameters of practical interest via a Bayesian power analysis. We also measure model performance via real-world data in which the model infers breeding locations of mosquitoes in bromeliads in Miami-Dade County, Florida, USA. In both cases, our novel model produces more efficient search strategies by shifting focus from those areas containing observed absences to those with no data, an improvement over existing models that treat these areas equally. Our model makes important improvements upon classic geographic profiling methods, which will significantly enhance real-world efforts to develop conservation management plans and targeted interventions.
Collapse
Affiliation(s)
- Michael C A Stevens
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
- Centre for Advanced Spatial Analysis, University College London, London, W1T 4TJ, UK
| | - Sally C Faulkner
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
| | - André B B Wilke
- Department of Public Health Sciences, Miller School of Medicine, University of Miami, Miami, Florida, 33136, USA
| | - John C Beier
- Department of Public Health Sciences, Miller School of Medicine, University of Miami, Miami, Florida, 33136, USA
| | - Chalmers Vasquez
- Miami-Dade County Mosquito Control Division, Miami, Florida, 33178, USA
| | - William D Petrie
- Miami-Dade County Mosquito Control Division, Miami, Florida, 33178, USA
| | - Hannah Fry
- Centre for Advanced Spatial Analysis, University College London, London, W1T 4TJ, UK
| | - Richard A Nichols
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
| | - Robert Verity
- Department of Infectious Disease Epidemiology, MRC Centre for Global Infectious Disease Analysis, Imperial College London, London, W2 1PG, UK
| | - Steven C Le Comber
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
| |
Collapse
|
3
|
Faulkes CG, Faulkner SC. Steven Clive Le Comber (19 June 1966–14 September 2019). J Zool (1987) 2020. [DOI: 10.1111/jzo.12758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- C. G. Faulkes
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| | - S. C. Faulkner
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| |
Collapse
|
4
|
Heald OJN, Fraticelli C, Cox SE, Stevens MCA, Faulkner SC, Blackburn TM, Le Comber SC. Understanding the origins of the ring‐necked parakeet in the UK. J Zool (1987) 2019. [DOI: 10.1111/jzo.12753] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- O. J. N. Heald
- Cameron Forensic Medical Sciences William Harvey Research Institute Barts and The London School of Medicine and Dentistry Queen Mary University of London London UK
| | - C. Fraticelli
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| | - S. E. Cox
- Goldsmiths University of London London UK
| | - M. C. A. Stevens
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| | - S. C. Faulkner
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| | - T. M. Blackburn
- Centre for Biodiversity and Environment Research University College London London UK
- Institute of Zoology Zoological Society of London London UK
| | - S. C. Le Comber
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| |
Collapse
|
5
|
Cerri J, Mori E, Zozzoli R, Gigliotti A, Chirco A, Bertolino S. Managing invasive Siberian chipmunks Eutamias sibiricus in Italy: a matter of attitudes and risk of dispersal. Biol Invasions 2019. [DOI: 10.1007/s10530-019-02115-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|
6
|
Faulkner SC, Stevens MCA, Romañach SS, Lindsey PA, Le Comber SC. A spatial approach to combatting wildlife crime. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2018; 32:685-693. [PMID: 28926135 DOI: 10.1111/cobi.13027] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2017] [Revised: 07/20/2017] [Accepted: 09/09/2017] [Indexed: 06/07/2023]
Abstract
Poaching can have devastating impacts on animal and plant numbers, and in many countries has reached crisis levels, with illegal hunters employing increasingly sophisticated techniques. We used data from an 8-year study in Savé Valley Conservancy, Zimbabwe, to show how geographic profiling-a mathematical technique originally developed in criminology and recently applied to animal foraging and epidemiology-can be adapted for use in investigations of wildlife crime. The data set contained information on over 10,000 incidents of illegal hunting and the deaths of 6,454 wild animals. We used a subset of data for which the illegal hunters' identities were known. Our model identified the illegal hunters' home villages based on the spatial locations of the hunting incidences (e.g., snares). Identification of the villages was improved by manipulating the probability surface inside the conservancy to reflect the fact that although the illegal hunters mostly live outside the conservancy, the majority of hunting occurs inside the conservancy (in criminology terms, commuter crime). These results combined with rigorous simulations showed for the first time how geographic profiling can be combined with GIS data and applied to situations with more complex spatial patterns, for example, where landscape heterogeneity means some parts of the study area are less likely to be used (e.g., aquatic areas for terrestrial animals) or where landscape permeability differs (e.g., forest bats tend not to fly over open areas). More broadly, these results show how geographic profiling can be used to target antipoaching interventions more effectively and more efficiently and to develop management strategies and conservation plans in a range of conservation scenarios.
Collapse
Affiliation(s)
- S C Faulkner
- Queen Mary University of London, School of Biological and Chemical Sciences, London, E1 4NS, U.K
| | - M C A Stevens
- Queen Mary University of London, School of Biological and Chemical Sciences, London, E1 4NS, U.K
| | - S S Romañach
- U.S. Geological Survey, Wetland and Aquatic Research Center, Fort Lauderdale, FL 33314, U.S.A
| | - P A Lindsey
- Panthera, 8 West 40th Street, 18th Floor, New York, NY 10018, U.S.A
- Mammal Research Institute, Department of Zoology and Entomology, University of Pretoria, Lynnwood Road, Hatfield, Pretoria 0002, South Africa
| | - S C Le Comber
- Queen Mary University of London, School of Biological and Chemical Sciences, London, E1 4NS, U.K
| |
Collapse
|
7
|
Faulkner SC, Verity R, Roberts D, Roy SS, Robertson PA, Stevenson MD, Le Comber SC. Using geographic profiling to compare the value of sightings vs trap data in a biological invasion. DIVERS DISTRIB 2016. [DOI: 10.1111/ddi.12498] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Affiliation(s)
- Sally C. Faulkner
- School of Biological and Chemical Sciences; Queen Mary University of London; London E1 4NS UK
| | - Robert Verity
- Medical Research Council Centre for Outbreak Analysis and Modelling; Imperial College London; London W2 1PG UK
| | - David Roberts
- Durrell Institute of Conservation and Ecology; School of Anthropology and Conservation; University of Kent; Marlowe Building Canterbury Kent CT2 7NR UK
| | - Sugoto S. Roy
- International Union for the Conservation of Nature; 28 re Mauverney CH-1196 Gland Switzerland
| | - Peter A. Robertson
- School of Biology; Newcastle University; Newcastle upon Tyne NE1 7RU UK
- Animal and Plant Health Agency; Sand Hutton York YO41 1LZ UK
| | - Mark D. Stevenson
- School of Biological and Chemical Sciences; Queen Mary University of London; London E1 4NS UK
| | - Steven C. Le Comber
- School of Biological and Chemical Sciences; Queen Mary University of London; London E1 4NS UK
| |
Collapse
|