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Perea S, Meinecke CD, Larsen-Gray AL, Greene DU, Villari C, Gandhi KJK, Castleberry SB. Winter diet of bats in working forests of the southeastern U.S. Coastal Plain. Sci Rep 2024; 14:12778. [PMID: 38834684 PMCID: PMC11150266 DOI: 10.1038/s41598-024-63062-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Accepted: 05/24/2024] [Indexed: 06/06/2024] Open
Abstract
Working forests comprise a large proportion of forested landscapes in the southeastern United States and are important to the conservation of bats, which rely on forests for roosting and foraging. While relationships between bat ecology and forest management are well studied during summer, winter bat ecology remains understudied. Hence, we aimed to identify the diet composition of overwintering bats, compare the composition of prey consumed by bat species, and determine the potential role of forest bats as pest controllers in working forest landscapes of the southeastern U.S. Coastal Plain. During January to March 2021-2022, we captured 264 bats of eight species. We used DNA metabarcoding to obtain diet composition from 126 individuals of seven bat species identifying 22 orders and 174 families of arthropod prey. Although Coleoptera, Diptera, and Lepidoptera were the most consumed orders, we found that bats had a generalist diet but with significant differences among some species. We also documented the consumption of multiple insect pests (e.g., Rhyacionia frustrana) and disease vectors (e.g., Culex spp). Our results provide important information regarding the winter diet of bats in the southeastern U.S. Coastal Plain and their potential role in controlling economically relevant pest species and disease vectors.
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Affiliation(s)
- Santiago Perea
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, USA.
| | - Colton D Meinecke
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, USA
| | | | - Daniel U Greene
- Weyerhaeuser Company, Environmental Research South, Columbus, MS, USA
| | - Caterina Villari
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, USA
| | - Kamal J K Gandhi
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, USA
| | - Steven B Castleberry
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, USA
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2
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Kou L, Yang N, Yan H, Niklas KJ, Sun S. Insect root feeders incur negative density-dependent damage across plant species in an alpine meadow. Ecology 2024; 105:e4285. [PMID: 38523437 DOI: 10.1002/ecy.4285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 12/07/2023] [Accepted: 02/01/2024] [Indexed: 03/26/2024]
Abstract
Although herbivores are well known to incur positive density-dependent damage and mortality, thereby likely shaping plant community assembly, the response of belowground root feeders to changes in plant density has seldom been addressed. Locally rare plant species (with lower plant biomass per area) are often smaller with shallower roots than common species (with higher plant biomass per area) in competition-intensive grasslands. Likewise, root feeders are often distributed in the upper soil layers. We hypothesized, therefore, that root feeders would incur negative density (biomass)-dependent damage across plant species. To test this hypothesis, we investigated the diversity and abundance of plant and root feeder species in an alpine meadow and determined the diet of the root feeders using metabarcoding. Across all species, root feeder load decreased with increasing aboveground plant biomass, root biomass, and total plant biomass per area, indicating a negative density dependence of damage across plant species. Aboveground plant biomass per area increased with increasing individual plant biomass and root depth per area across species, suggesting that rare plant species were smaller in size and had shallower root systems compared to common plant species. Both root biomass per area and root feeder biomass per area decreased with soil depth, but the root feeder biomass decreased disproportionately faster compared to root biomass with increasing root depth. Root feeder load decreased with increasing root depth but was not correlated with the feeding preference of root feeder species. Moreover, the prediction derived from a random process incorporating vertical distributions of root biomass and root feeder biomass significantly accounted for interspecific variation in root feeder load. In conclusion, the data indicate that root feeders incur negative density-dependent damage across plant species. On this basis, we suggest that manipulative experiments should be conducted to determine the effect of the negative density-dependent damage on plant community structure and that different types of plant-animal interactions should be concurrently examined to fully understand the effect of plant density on overall herbivore damage across plant species.
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Affiliation(s)
- Lixuan Kou
- Department of Ecology, School of Life Sciences, Nanjing University, Nanjing, China
| | - Nan Yang
- Department of Ecology, School of Life Sciences, Nanjing University, Nanjing, China
| | - Han Yan
- Department of Ecology, School of Life Sciences, Nanjing University, Nanjing, China
| | - Karl J Niklas
- School of Integrative Plant Science, Cornell University, Ithaca, New York, USA
| | - Shucun Sun
- Department of Ecology, School of Life Sciences, Nanjing University, Nanjing, China
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3
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Aihartza J, Vallejo N, Aldasoro M, García-Mudarra JL, Goiti U, Nogueras J, Ibáñez C. Aerospace-foraging bats eat seasonably across varying habitats. Sci Rep 2023; 13:19576. [PMID: 37950015 PMCID: PMC10638376 DOI: 10.1038/s41598-023-46939-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 11/07/2023] [Indexed: 11/12/2023] Open
Abstract
Recent research has confirmed the efficiency of insectivorous bats as pest suppressors, underlining the ecological services they offer in agroecosystems. Therefore, some efforts try to enhance bat foraging in agricultural landscapes by acting upon environmental factors favouring them. In this study, we monitored a Miniopterus schreibersii colony, in the southern Iberian Peninsula. We intensively sampled their faeces and analysed them by metabarcoding to describe how the bent-winged bat diet would change with time, and to test whether their most-consumed prey would seasonally depend on different landscapes or habitats. Our results confirm that M. schreibersii are selective opportunist predators of moths, dipterans, mayflies, and other fluttering insects, shifting their diet to temporary peaks of prey availability in their foraging range, including both pest and non-pest insects. Supporting our hypothesis, throughout the year, M. schreibersii consume insects linked to diverse open habitats, including wetlands, grassland, diverse croplands, and woodland. The importance of each prey habitat varies seasonally, depending on their insect phenology, making bats indirectly dependent on a diverse landscape as their primary prey source. Bats' predation upon pest insects is quantitatively high, consuming around 1610 kg in 5 months, of which 1467 kg correspond to ten species. So, their suppression effect may be relevant, mainly in patchy heterogeneous landscapes, where bats' foraging may concentrate in successive outbursts of pests, affecting different crops or woodlands. Our results stress that to take advantage of the ecosystem services of bats or other generalist insectivores, keeping the environmental conditions they require to thrive, particularly a heterogeneous landscape within the colony's foraging area, is crucial.
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Affiliation(s)
- Joxerra Aihartza
- Department of Zoology and Animal Cell Biology, University of the Basque Country UPV/EHU, Sarriena s/n, 48940, Leioa, The Basque Country, Spain.
| | - Nerea Vallejo
- Department of Zoology and Animal Cell Biology, University of the Basque Country UPV/EHU, Sarriena s/n, 48940, Leioa, The Basque Country, Spain
| | - Miren Aldasoro
- Department of Zoology and Animal Cell Biology, University of the Basque Country UPV/EHU, Sarriena s/n, 48940, Leioa, The Basque Country, Spain
| | | | - Urtzi Goiti
- Department of Zoology and Animal Cell Biology, University of the Basque Country UPV/EHU, Sarriena s/n, 48940, Leioa, The Basque Country, Spain
| | - Jesus Nogueras
- Estación Biológica de Doñana (CSIC), P.O. Box 1056, 41080, Sevilla, Spain
| | - Carlos Ibáñez
- Estación Biológica de Doñana (CSIC), P.O. Box 1056, 41080, Sevilla, Spain
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4
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Tuneu-Corral C, Puig-Montserrat X, Riba-Bertolín D, Russo D, Rebelo H, Cabeza M, López-Baucells A. Pest suppression by bats and management strategies to favour it: a global review. Biol Rev Camb Philos Soc 2023; 98:1564-1582. [PMID: 37157976 DOI: 10.1111/brv.12967] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 04/13/2023] [Accepted: 04/17/2023] [Indexed: 05/10/2023]
Abstract
Fighting insect pests is a major challenge for agriculture worldwide, and biological control and integrated pest management constitute well-recognised, cost-effective ways to prevent and overcome this problem. Bats are important arthropod predators globally and, in recent decades, an increasing number of studies have focused on the role of bats as natural enemies of agricultural pests. This review assesses the state of knowledge of the ecosystem services provided by bats as pest consumers at a global level and provides recommendations that may favour the efficiency of pest predation by bats. Through a systematic review, we assess evidence for predation, the top-down effect of bats on crops and the economic value of ecosystem services these mammals provide, describing the different methodological approaches used in a total of 66 reviewed articles and 18 agroecosystem types. We also provide a list of detailed conservation measures and management recommendations found in the scientific literature that may favour the delivery of this important ecosystem service, including actions aimed at restoring bat populations in agroecosystems. The most frequent recommendations include increasing habitat heterogeneity, providing additional roosts, and implementing laws to protect bats and reduce agrochemical use. However, very little evidence is available on the direct consequences of these practices on bat insectivory in farmland. Additionally, through a second in-depth systematic review of scientific articles focused on bat diet and, as part of the ongoing European Cost Action project CA18107, we provide a complete list of 2308 documented interactions between bat species and their respective insect pest prey. These pertain to 81 bat species belonging to 36 different genera preying upon 760 insect pests from 14 orders in agroecosystems and other habitats such as forest or urban areas. The data set is publicly available and updatable.
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Affiliation(s)
- Carme Tuneu-Corral
- BiBio, Biodiversity and Bioindicators Research Group, Natural Sciences Museum of Granollers, Av. Francesc Macià 51, Granollers, Catalonia, 08402, Spain
- CIBIO-InBIO, Centro de Investigaçaõ em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, 4485-661, Portugal
- Global Change and Conservation Lab, Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
| | - Xavier Puig-Montserrat
- BiBio, Biodiversity and Bioindicators Research Group, Natural Sciences Museum of Granollers, Av. Francesc Macià 51, Granollers, Catalonia, 08402, Spain
| | - Daniel Riba-Bertolín
- BiBio, Biodiversity and Bioindicators Research Group, Natural Sciences Museum of Granollers, Av. Francesc Macià 51, Granollers, Catalonia, 08402, Spain
| | - Danilo Russo
- Laboratory of Animal Ecology and Evolution (AnEcoEvo), Dipartimento di Agraria, Università degli Studi di Napoli Federico II, via Università, 100, Portici, Naples, 80055, Italy
| | - Hugo Rebelo
- CIBIO-InBIO, Centro de Investigaçaõ em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, 4485-661, Portugal
| | - Mar Cabeza
- Global Change and Conservation Lab, Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
| | - Adrià López-Baucells
- BiBio, Biodiversity and Bioindicators Research Group, Natural Sciences Museum of Granollers, Av. Francesc Macià 51, Granollers, Catalonia, 08402, Spain
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Ayala-Berdon J, Martínez Gómez M, Ponce AR, Beamonte-Barrientos R, Vázquez J, Rodriguez-Peña ON. Weather, ultrasonic, cranial and body traits predict insect diet hardness in a Central Mexican bat community. MAMMAL RES 2023. [DOI: 10.1007/s13364-023-00678-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2023]
Abstract
AbstractInsectivorous bats exhibit food preferences for specific attributes in their prey. Hardness has been defined as an important prey attribute, and in some cases a limiting factor in foraging decisions for smaller compared to larger bat species. The goal of this study was to identify which factors influence the selection of prey hardness in a vespertilionid bat community. We investigated food consumed by bats by analyzing fecal samples obtained from eight bat species coexisting in a mountain ecosystem of central Mexico and correlate non-phylogenetically and phylogenetically prey hardness to weather, bat´s body, cranial and ultrasonic call structure variables. Results showed that diet of vespertilionid bats was mainly represented by Diptera, Neuroptera, Lepidoptera and Coleoptera consumption. The qualitative prey hardness index (From soft 1 to hard 5) ranked bats as: Myotis melanorhinus, Corynorhinus mexicanus, Myotis volans, Myotis californicus (< 3); Myotis velifer (< 4); Eptesicus fuscus, Idionycteris phyllotis and Myotis thysanodes (> 4.2). Prey hardness was positively correlated to minimum and mean temperatures, bat´s body weight, total and forearm lengths, cranial variables as: zygomatic breadth, mandibular length, height of the coronoid process, lower molar width, C-M3 superior and inferior rows length and upper molar width; and negatively to ultrasonic variables as total slope, call duration, low and high frequencies, band width and frequency maximum power. Considering phylogenies, prey hardness positively correlated to mandibular length, C-M3 inferior and superior rows lengths (p < 0.05). Our results showed that environmental, morphological and echolocation variables can be used as predictors of preferred insect prey in a community of vespertilionid bats.
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6
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Gong L, Gu H, Chang Y, Wang Z, Shi B, Lin A, Wu H, Feng J, Jiang T. Seasonal variation of population and individual dietary niche in the avivorous bat, Ia io. Oecologia 2023; 201:733-747. [PMID: 36929223 DOI: 10.1007/s00442-023-05346-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Accepted: 02/28/2023] [Indexed: 03/18/2023]
Abstract
The variation in niche breadth can affect how species respond to environmental and resource changes. However, there is still no clear understanding of how seasonal variability in food resources impacts the variation of individual dietary diversity, thereby affecting the dynamics of a population's dietary niche breadth. Optimal foraging theory (OFT) and the niche variation hypothesis (NVH) predict that when food resources are limited, the population niche breadth will widen or narrow due to increased within-individual dietary diversity and individual specialization or reduced within-individual dietary diversity, respectively. Here, we used DNA metabarcoding to examine the composition and seasonality of diets of the avivorous bat Ia io. Furthermore, we investigated how the dietary niches changed among seasons and how the population niche breadth changed when the availability of insect resources was reduced in autumn. We found that there was differentiation in dietary niches among seasons and a low degree of overlap, and the decrease of insect resource availability and the emergence of ecological opportunities of nocturnal migratory birds might drive dietary niche shifts toward birds in I. io. However, the population's dietary niche breadth did not broaden by increasing the within-individual dietary diversity or individual specialization, but rather became narrower by reducing dietary diversity via predation on bird resources that served as an ecological opportunity when insect resources were scarce in autumn. Our findings were consistent with the predictions of OFT, because birds as prey for bats provided extremely different resources from those of insects in size and nutritional value. Our work highlights the importance of size and quality of prey resources along with other factors (i.e., physiological, behavioral, and life-history traits) in dietary niche variation.
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Affiliation(s)
- Lixin Gong
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Hao Gu
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Yang Chang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Zhiqiang Wang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Biye Shi
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Aiqing Lin
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Hui Wu
- College of Life Science, Jilin Agricultural University, 2888 Xincheng Street, Changchun, 130118, China
| | - Jiang Feng
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China.
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China.
- College of Life Science, Jilin Agricultural University, 2888 Xincheng Street, Changchun, 130118, China.
| | - Tinglei Jiang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China.
- Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China.
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7
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Yu P, Cao C, Liu X, Hayashi F. Adults of Alderflies, Fishflies, and Dobsonflies (Megaloptera) Expel Meconial Fluid When Disturbed. INSECTS 2023; 14:86. [PMID: 36662014 PMCID: PMC9864192 DOI: 10.3390/insects14010086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 01/08/2023] [Accepted: 01/11/2023] [Indexed: 06/17/2023]
Abstract
Chemical secretions are an effective means by which insects may deter potential enemies, already being studied extensively with regard to their chemicals, synthesis, toxicity, and functions. However, these defensive secretions have been little studied in Megaloptera. Herein, the fluid expelling behavior of adult alderflies (Sialidae), fishflies (Corydalidae: Chauliodinae), and dobsonflies (Corydalidae: Corydalinae), all of the order Megaloptera, is described in detail regarding the timing and possible function of this behavior. When disturbed artificially, both males and females could expel fluid from the anus. However, the frequency of expelling was much lower in alderflies than in fishflies and dobsonflies. The amount of expelled fluid relative to body weight was also smaller in alderflies. In fishflies and dobsonflies, the amount of expelled fluid decreased with adult age, probably because the fluid is little replenished once expelled. The cream-colored fluid seems to be meconial fluid produced via the Malpighian tubules at the pupal stage, which is usually discharged at adult emergence in most other holometabolous insects. However, adult fishflies and dobsonflies often expel it vigorously by bending their abdomen when disturbed after emergence. Thus, the fluid expelling may be an anti-predatory behavior, particularly in younger adults that can expel a relatively large amount of fluid.
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Affiliation(s)
- Pei Yu
- Department of Biology, Tokyo Metropolitan University, Minamiosawa 1-1, Hachioji 192-0397, Tokyo, Japan
| | - Chengquan Cao
- College of Life Science, Leshan Normal University, Leshan 614004, China
| | - Xingyue Liu
- Department of Entomology, China Agricultural University, Beijing 100193, China
| | - Fumio Hayashi
- Department of Biology, Tokyo Metropolitan University, Minamiosawa 1-1, Hachioji 192-0397, Tokyo, Japan
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8
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Deeley S, Kang L, Michalak P, Hallerman E, Ford WM. DNA Metabarcoding-Based Evaluation of the Diet of Big Brown Bats (Eptesicus Fuscus) in the Mid-Atlantic Region. Northeast Nat (Steuben) 2023. [DOI: 10.1656/045.029.0405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Sabrina Deeley
- United States Fish and Wildlife Service, Chesapeake Bay Field Office, Annapolis, MD 21401
| | - Lin Kang
- Biomedical Research, Edward Via College of Osteopathic Medicine, Monroe, LA 71203
| | - Pawel Michalak
- Department of Biomedical Sciences and Pathobiology, VA–MD Regional College of Veterinary Medicine, Virginia Tech, Blacksburg, VA 24060
| | - Eric Hallerman
- Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, VA 24061
| | - W. Mark Ford
- US Geological Survey, Virginia Cooperative Fish and Wildlife Research Unit, Blacksburg, VA 24061
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9
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Fonseca ML, Ramírez-Pinzón MA, McNeil KN, Guevara M, Gómez-Gutiérrez LM, Harter K, Mongui A, Stevenson PR. Dietary preferences and feeding strategies of Colombian highland woolly monkeys. Sci Rep 2022; 12:14364. [PMID: 35999220 PMCID: PMC9399098 DOI: 10.1038/s41598-022-17655-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Accepted: 07/28/2022] [Indexed: 12/02/2022] Open
Abstract
Primates are very selective in the foods they include in their diets with foraging strategies that respond to spatial and temporal changes in resource availability, distribution and quality. Colombian woolly monkeys (Lagothrix lagotricha lugens), one of the largest primate species in the Americas, feed mainly on fruits, but they also eat a high percentage of arthropods. This differs from closely related Atelid species that supplement their diet with leaves. In an 11 month study, we investigated the foraging strategies of this endemic monkey and assessed how resource availability affects dietary selection. Using behavioural, phenological, arthropod sampling and metabarcoding methods, we recorded respectively foraging time, forest productivity, arthropod availability in the forest and arthropod consumption. Scat samples and capturing canopy substrates (i.e. moss, bromeliads, aerial insects) were used for assigning arthropod taxonomy. The most important resource in the diet was fruits (54%), followed by arthropods (28%). Resource availability predicted feeding time for arthropods but not for fruits. Further, there was a positive relationship between feeding time on fruits and arthropods, suggesting that eating both resources during the same periods might work as an optimal strategy to maximize nutrient intake. Woolly monkeys preferred and avoided some fruit and arthropod items available in their home range, choosing a wide variety of arthropods. Geometrid moths (Lepidoptera) were the most important and consistent insects eaten over time. We found no differences in the type of arthropods adults and juveniles ate, but adults invested more time foraging for this resource, especially in moss. Although woolly monkeys are generalist foragers, they do not select their food items randomly or opportunistically.
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Affiliation(s)
- Manuel L Fonseca
- Laboratorio de Ecología de Bosques Tropicales y Primatología (LEBTYP), Departamento de Ciencias Biológicas, Universidad de Los Andes, Bogotá, Colombia.
- Comparative Zoology, Institut für Evolution und Ökologie (EvE), Eberhard Karls Universität Tübingen, Tübingen, Germany.
| | - Marcela A Ramírez-Pinzón
- Laboratorio de Zoología y Ecología Acuática (LAZOEA), Departamento de Ciencias Biológicas, Universidad de Los Andes, Bogotá, Colombia
| | - Kaylie N McNeil
- Department of Anthropology, University of Texas at San Antonio, San Antonio, TX, USA
| | - Michelle Guevara
- Departamento de Ciencias Biológicas, Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia
| | - Laura M Gómez-Gutiérrez
- Laboratorio de Ecología de Bosques Tropicales y Primatología (LEBTYP), Departamento de Ciencias Biológicas, Universidad de Los Andes, Bogotá, Colombia
| | - Klaus Harter
- Zentrum für Molekularbiologie der Pflanzen (ZMBP), Eberhard Karls Universität Tübingen, Tübingen, Germany
| | - Alvaro Mongui
- Departamento de Ciencias Biológicas, Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia
| | - Pablo R Stevenson
- Laboratorio de Ecología de Bosques Tropicales y Primatología (LEBTYP), Departamento de Ciencias Biológicas, Universidad de Los Andes, Bogotá, Colombia
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10
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O'Rourke D, Rouillard NP, Parise KL, Foster JT. Spatial and temporal variation in New Hampshire bat diets. Sci Rep 2022; 12:14334. [PMID: 35995911 PMCID: PMC9395357 DOI: 10.1038/s41598-022-17631-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2022] [Accepted: 07/28/2022] [Indexed: 11/09/2022] Open
Abstract
Insectivorous bats consume a diverse array of arthropod prey, with diets varying by bat species, sampling location, and season. North American bat diets remain incompletely described, which is concerning at a time when many bat and insect populations appear to be declining. Understanding the variability in foraging is thus an essential component for effective bat conservation. To comprehensively evaluate local foraging, we assessed the spatial and temporal variability in prey consumed by the little brown bat, Myotis lucifugus, in New Hampshire, USA. We collected bat guano samples from 20 sites over 2 years and analyzed sequence data for 899 of these samples using a molecular metabarcoding approach targeting the cytochrome oxidase I subunit (COI) gene. Some prey items were broadly shared across locations and sampling dates, with the most frequently detected arthropod orders broadly similar to previous morphological and molecular analyses; at least one representative sequence variant was assigned to Coleoptera in 92% of samples, with other frequently detected orders including Diptera (73%), Lepidoptera (65%), Trichoptera (38%), and Ephemeroptera (32%). More specifically, two turf and forest pests were routinely detected: white grubs in the genus Phyllophaga (50%), and the Asiatic Garden beetle, Maladera castanea (36%). Despite the prevalence of a few taxa shared among many samples and distinct seasonal peaks in consumption of specific arthropods, diet composition varied both temporally and spatially. However, species richness did not strongly vary indicating consumption of a broad diversity of taxa throughout the summer. These data characterize little brown bats as flexible foragers adept at consuming a broad array of locally available prey resources.
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Affiliation(s)
- Devon O'Rourke
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH, USA. .,Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
| | - Nicholas P Rouillard
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH, USA
| | - Katy L Parise
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH, USA.,Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA
| | - Jeffrey T Foster
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH, USA.,Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA
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11
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Davies SR, Vaughan IP, Thomas RJ, Drake LE, Marchbank A, Symondson WOC. Seasonal and ontological variation in diet and age-related differences in prey choice, by an insectivorous songbird. Ecol Evol 2022; 12:e9180. [PMID: 35979519 PMCID: PMC9366593 DOI: 10.1002/ece3.9180] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 07/15/2022] [Accepted: 07/16/2022] [Indexed: 11/09/2022] Open
Abstract
The diet of an individual animal is subject to change over time, both in response to short-term food fluctuations and over longer time scales as an individual ages and meets different challenges over its life cycle. A metabarcoding approach was used to elucidate the diet of different life stages of a migratory songbird, the Eurasian reed warbler (Acrocephalus scirpaceus) over the 2017 summer breeding season in Somerset, the United Kingdom. The feces of adult, juvenile, and nestling warblers were screened for invertebrate DNA, enabling the identification of prey species. Dietary analysis was coupled with monitoring of Diptera in the field using yellow sticky traps. Seasonal changes in warbler diet were subtle, whereas age class had a greater influence on overall diet composition. Age classes showed high dietary overlap, but significant dietary differences were mediated through the selection of prey; (i) from different taxonomic groups, (ii) with different habitat origins (aquatic vs. terrestrial), and (iii) of different average approximate sizes. Our results highlight the value of metabarcoding data for enhancing ecological studies of insectivores in dynamic environments.
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Affiliation(s)
| | - Ian P. Vaughan
- Cardiff School of BiosciencesCardiff UniversityCardiffUK
| | | | - Lorna E. Drake
- Cardiff School of BiosciencesCardiff UniversityCardiffUK
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12
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Wray AK, Gratton C, Jusino MA, Wang JJ, Kochanski JM, Palmer JM, Banik MT, Lindner DL, Peery MZ. Disease-related population declines in bats demonstrate non-exchangeability in generalist predators. Ecol Evol 2022; 12:e8978. [PMID: 35784069 PMCID: PMC9170538 DOI: 10.1002/ece3.8978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Revised: 05/04/2022] [Accepted: 05/09/2022] [Indexed: 11/15/2022] Open
Abstract
The extent to which persisting species may fill the functional role of extirpated or declining species has profound implications for the structure of biological communities and ecosystem functioning. In North America, arthropodivorous bats are threatened on a continent-wide scale by the spread of white-nose syndrome (WNS), a disease caused by the fungus Pseudogymnoascus destructans. We tested whether bat species that display lower mortality from this disease can partially fill the functional role of other bat species experiencing population declines. Specifically, we performed high-throughput amplicon sequencing of guano from two generalist predators: the little brown bat (Myotis lucifugus) and big brown bat (Eptesicus fuscus). We then compared changes in prey consumption before versus after population declines related to WNS. Dietary niches contracted for both species after large and abrupt declines in little brown bats and smaller declines in big brown bats, but interspecific dietary overlap did not change. Furthermore, the incidence and taxonomic richness of agricultural pest taxa detected in diet samples decreased following bat population declines. Our results suggest that persisting generalist predators do not necessarily expand their dietary niches following population declines in other predators, providing further evidence that the functional roles of different generalist predators are ecologically distinct.
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Affiliation(s)
- Amy K. Wray
- Department of Forest & Wildlife EcologyUniversity of Wisconsin‐MadisonMadisonWisconsinUSA
| | - Claudio Gratton
- Department of EntomologyUniversity of Wisconsin‐MadisonMadisonWisconsinUSA
| | - Michelle A. Jusino
- Center for Forest Mycology ResearchNorthern Research StationUSDA Forest ServiceMadisonWisconsinUSA
| | - Jing Jamie Wang
- Department of Forest & Wildlife EcologyUniversity of Wisconsin‐MadisonMadisonWisconsinUSA
| | - Jade M. Kochanski
- Department of EntomologyUniversity of Wisconsin‐MadisonMadisonWisconsinUSA
- Department of Integrative BiologyUniversity of Wisconsin‐MadisonMadisonWisconsinUSA
| | - Jonathan M. Palmer
- Center for Forest Mycology ResearchNorthern Research StationUSDA Forest ServiceMadisonWisconsinUSA
| | - Mark T. Banik
- Center for Forest Mycology ResearchNorthern Research StationUSDA Forest ServiceMadisonWisconsinUSA
| | - Daniel L. Lindner
- Center for Forest Mycology ResearchNorthern Research StationUSDA Forest ServiceMadisonWisconsinUSA
| | - M. Zachariah Peery
- Department of Forest & Wildlife EcologyUniversity of Wisconsin‐MadisonMadisonWisconsinUSA
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13
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14
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Mirts HE, McLaughlin JP, Weller TJ, White AM, Young HS, Sollmann R. Bats in the megafire: assessing species’ site use in a postfire landscape in the Sierra Nevada. J Mammal 2021. [DOI: 10.1093/jmammal/gyab129] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Large high-severity fires are increasing in frequency in many parts of the world, including the coniferous forests of the Sierra Nevada mountains. These “megafires” alter vegetation and environmental conditions in forests, yet their impacts on native wildlife remain poorly understood. Bats play an important role in forest ecosystems, but their responses to megafires likewise are understudied. We investigated bat responses to the King Fire, a megafire that burned nearly 40,000 ha within the Eldorado National Forest in 2014, half of it at high severity. From June to September 2017, we used remote acoustic recorders to survey bats at 26 sites with varying fire severity (unburned, mixed, and high severity). We analyzed data with Royle–Nichols occupancy models to investigate how bat space use was influenced by megafires, and whether this response was driven by prey availability, fire severity, or fire-altered habitat conditions. We calculated prey species richness, biomass, and abundance, from moths sampled with blacklight surveys. Vegetation covariates included tree density, canopy cover, and shrub density, measured along vegetation transects. To capture general effects of fire, we also included fire severity and the percentage of dead trees as potential covariates on space use. Prey variables were highest in unburned forests, were the most common predictors of, and generally had positive effects on bat space use. Responses to tree density and canopy cover varied by species; the most common vegetation covariate, shrub density, had weak positive effects on bat space use. In spite of the varying prey and vegetation conditions across fire severity categories, most bats showed weak to no response in space use to fire severity and tree mortality. We attribute this to the highly mobile nature of bats, which reduces the impact of potentially negative local conditions.
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Affiliation(s)
- Haley E Mirts
- Department of Wildlife, Fish, and Conservation Biology, University of California Davis, Davis, CA, USA
| | - John P McLaughlin
- Marine Science Institute, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Theodore J Weller
- USDA Forest Service, Pacific Southwest Research Station, Arcata, CA, USA
| | - Angela M White
- USDA Forest Service, Pacific Southwest Research Station, Davis, CA, USA
| | - Hillary S Young
- Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Rahel Sollmann
- Department of Wildlife, Fish, and Conservation Biology, University of California Davis, Davis, CA, USA
- Department of Ecological Dynamics, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
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15
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Gomes DGE, Toth CA, Bateman CC, Francis CD, Kawahara AY, Barber JR. Experimental river noise alters arthropod abundance. OIKOS 2021. [DOI: 10.1111/oik.08499] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Dylan G. E. Gomes
- Dept of Biological Sciences, Boise State Univ. Boise ID USA
- Cooperative Inst. for Marine Resources Studies – Hatfield Marine Science Center, Oregon State Univ. Newport OR USA
| | - Cory A. Toth
- Dept of Biological Sciences, Boise State Univ. Boise ID USA
| | - Craig C. Bateman
- Florida Museum of Natural History, McGuire Center for Lepidoptera and Biodiversity, Univ. of Florida Gainesville FL USA
| | - Clinton D. Francis
- Dept of Biological Sciences, California Polytechnic State Univ. San Luis Obispo CA USA
| | - Akito Y. Kawahara
- Florida Museum of Natural History, McGuire Center for Lepidoptera and Biodiversity, Univ. of Florida Gainesville FL USA
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16
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Weinberg MM, Retta NA, Schrode KM, Screven LA, Peterson JL, Moss CF, Sterbing S, Lauer AM. Deafness in an auditory specialist, the big brown bat (Eptesicus fuscus). Hear Res 2021; 412:108377. [PMID: 34735823 DOI: 10.1016/j.heares.2021.108377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Revised: 10/04/2021] [Accepted: 10/13/2021] [Indexed: 10/20/2022]
Abstract
Bats are long-lived animals that show presumed resistance to noise-induced and age-related hearing loss, which has been attributed to their dependence on sound processing for survival. Echolocation and basic auditory functions have been studied extensively in the big brown bat (Eptesicus fuscus), an insectivorous microchiropteran species. We conducted hearing tests and analysis of cochlear sensory cells in a group of big brown bats that exhibited anomalies in behavioral sonar tracking experiments and/or lacked neural responses to acoustic stimulation in subcortical auditory nuclei. We show for the first time the presence of profound deafness and extensive cochlear damage in an echolocating bat species. Auditory brainstem responses were abnormal or absent in these bats, and histological analyses of their cochleae revealed extensive loss of hair cells, supporting cells, and spiral ganglion neurons. The underlying cause of deafness is unknown.
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Affiliation(s)
- Madison M Weinberg
- Department of Otolaryngology-HNS, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
| | - Nazrawit A Retta
- Department of Otolaryngology-HNS, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA
| | - Katrina M Schrode
- Department of Otolaryngology-HNS, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA
| | - Laurel A Screven
- Department of Otolaryngology-HNS, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA
| | - Jamie L Peterson
- Art as Applied to Medicine, Johns Hopkins University School of Medicine Baltimore, MD 21205, USA
| | - Cynthia F Moss
- Department of Psychological and Brain Sciences, Johns Hopkins University, Baltimore, MD 21218, USA; Department of Neuroscience, Johns Hopkins University, Baltimore, MD 21205, USA
| | - Susanne Sterbing
- Department of Psychological and Brain Sciences, Johns Hopkins University, Baltimore, MD 21218, USA
| | - Amanda M Lauer
- Department of Otolaryngology-HNS, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Neuroscience, Johns Hopkins University, Baltimore, MD 21205, USA
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17
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Feasting, not fasting: winter diets of cave hibernating bats in the United States. Front Zool 2021; 18:48. [PMID: 34556122 PMCID: PMC8461964 DOI: 10.1186/s12983-021-00434-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Accepted: 09/09/2021] [Indexed: 11/29/2022] Open
Abstract
Temperate bat species use extended torpor to conserve energy when ambient temperatures are low and food resources are scarce. Previous research suggests that migratory bat species and species known to roost in thermally unstable locations, such as those that roost in trees, are more likely to remain active during winter. However, hibernating colonies of cave roosting bats in the southeastern United States may also be active and emerge from caves throughout the hibernation period. We report what bats are eating during these bouts of winter activity. We captured 2,044 bats of 10 species that emerged from six hibernacula over the course of 5 winters (October–April 2012/2013, 2013/2014, 2015/2016, 2016/2017, and 2017/2018). Using Next Generation sequencing of DNA from 284 fecal samples, we determined bats consumed at least 14 Orders of insect prey while active. Dietary composition did not vary among bat species; however, we did record variation in the dominant prey items represented in species’ diets. We recorded Lepidoptera in the diet of 72.2% of individual Corynorhinus rafinesquii and 67.4% of individual Lasiurus borealis. Diptera were recorded in 32.4% of Myotis leibii, 37.4% of M. lucifugus, 35.5% of M. sodalis and 68.8% of Perimyotis subflavus. Our study is the first to use molecular genetic techniques to identify the winter diet of North American hibernating bats. The information from this study is integral to managing the landscape around bat hibernacula for insect prey, particularly in areas where hibernating bat populations are threatened by white-nose syndrome.
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Johnson C, Brown DJ, Sanders C, Stihler CW. Long-term changes in occurrence, relative abundance, and reproductive fitness of bat species in relation to arrival of White-nose Syndrome in West Virginia, USA. Ecol Evol 2021; 11:12453-12467. [PMID: 34594512 PMCID: PMC8462164 DOI: 10.1002/ece3.7991] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2021] [Revised: 07/12/2021] [Accepted: 07/16/2021] [Indexed: 12/15/2022] Open
Abstract
White-nose syndrome (WNS) is a disease caused by the fungus Pseudogymnoascus destructans which has resulted in the deaths of millions of bats across eastern North America. To date, hibernacula counts have been the predominant means of tracking the spread and impact of this disease on bat populations. However, an understanding of the impacts of WNS on demographic parameters outside the winter season is critical to conservation and recovery of bat populations impacted by this disease. We used long-term monitoring data to examine WNS-related impacts to summer populations in West Virginia, where WNS has been documented since 2009. Using capture data from 290 mist-net sites surveyed from 2003 to 2019 on the Monongahela National Forest, we estimated temporal patterns in presence and relative abundance for each bat species. For species that exhibited a population-level response to WNS, we investigated post-WNS changes in adult female reproductive state and body mass. Myotis lucifugus (little brown bat), M. septentrionalis (northern long-eared bat), and Perimyotis subflavus (tri-colored bat) all showed significant decreases in presence and relative abundance during and following the introduction of WNS, while Eptesicus fuscus (big brown bat) and Lasiurus borealis (eastern red bat) responded positively during the WNS invasion. Probability of being reproductively active was not significantly different for any species, though a shift to earlier reproduction was estimated for E. fuscus and M. septentrionalis. For some species, body mass appeared to be influenced by the WNS invasion, but the response differed by species and reproductive state. Results suggest that continued long-term monitoring studies, additional research into impacts of this disease on the fitness of WNS survivors, and a focus on providing optimal nonwintering habitat may be valuable strategies for assessing and promoting recovery of WNS-affected bat populations.
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Affiliation(s)
- Catherine Johnson
- Monongahela National ForestU.S. Forest ServiceElkinsWest VirginiaUSA
- Region 1National Park ServiceNarragansettRhode IslandUSA
| | - Donald J. Brown
- School of Natural ResourcesWest Virginia UniversityMorgantownWest VirginiaUSA
- Northern Research StationU.S.D.A. Forest ServiceParsonsWest VirginiaUSA
| | | | - Craig W. Stihler
- West Virginia Division of Natural Resources (retired)ElkinsWest VirginiaUSA
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Robinson CV, Robinson JM. Listen But Do Not Touch: Using a Smartphone Acoustic Device to Investigate Bat Activity, with Implications for Community-Based Monitoring. ACTA CHIROPTEROLOGICA 2021. [DOI: 10.3161/15081109acc2021.23.1.021] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Chloe V. Robinson
- Integrative Biology, Centre for Biodiversity Genomics, University of Guelph, 50 Stone Road E, Guelph, ON, N1G 2W1, Canada
| | - Jessica M. Robinson
- Integrative Biology, Centre for Biodiversity Genomics, University of Guelph, 50 Stone Road E, Guelph, ON, N1G 2W1, Canada
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20
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Beilke EA, Blakey RV, O’Keefe JM. Bats partition activity in space and time in a large, heterogeneous landscape. Ecol Evol 2021; 11:6513-6526. [PMID: 34141236 PMCID: PMC8207427 DOI: 10.1002/ece3.7504] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 03/07/2021] [Accepted: 03/12/2021] [Indexed: 11/23/2022] Open
Abstract
Diverse species assemblages theoretically partition along multiple resource axes to maintain niche separation between all species. Temporal partitioning has received less attention than spatial or dietary partitioning but may facilitate niche separation when species overlap along other resource axes. We conducted a broad-scale acoustic study of the diverse and heterogeneous Great Smoky Mountains National Park in the Appalachian Mountains. Between 2015 and 2016, we deployed acoustic bat detectors at 50 sites (for a total of 322 survey nights). We examined spatiotemporal patterns of bat activity (by phonic group: Low, Mid, and Myotis) to test the hypothesis that bats partition both space and time. Myotis and Low bats were the most spatially and temporally dissimilar, while Mid bats were more general in their resource use. Low bats were active in early successional openings or low-elevation forests, near water, and early in the evening. Mid bats were similarly active in all land cover classes, regardless of distance from water, throughout the night. Myotis avoided early successional openings and were active in forested land cover classes, near water, and throughout the night. Myotis and Mid bats did not alter their spatial activity patterns from 2015 to 2016, while Low bats did. We observed disparate temporal activity peaks between phonic groups that varied between years and by land cover class. The temporal separation between phonic groups relaxed from 2015 to 2016, possibly related to changes in the relative abundance of bats or changes in insect abundance or diversity. Temporal separation was more pronounced in the land cover classes that saw greater overall bat activity. These findings support the hypothesis that niche separation in diverse assemblages may occur along multiple resource axes and adds to the growing body of evidence that bats partition their temporal activity.
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Affiliation(s)
- Elizabeth A. Beilke
- Department of Natural Resources and Environmental SciencesUniversity of Illinois at Urbana‐ChampaignUrbanaILUSA
- Center for Bat Research, Outreach, and ConservationIndiana State UniversityTerre HauteINUSA
| | - Rachel V. Blakey
- La Kretz Center for California Conservation ScienceInstitute of the Environment and SustainabilityUniversity of CaliforniaLos AngelesCAUSA
- Department of Ecology and Evolutionary BiologyUniversity of CaliforniaLos AngelesCAUSA
| | - Joy M. O’Keefe
- Department of Natural Resources and Environmental SciencesUniversity of Illinois at Urbana‐ChampaignUrbanaILUSA
- Center for Bat Research, Outreach, and ConservationIndiana State UniversityTerre HauteINUSA
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21
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Hou J, Li L, Wang Y, Wang W, Zhan H, Dai N, Lu P. Influences of submerged plant collapse on diet composition, breadth, and overlap among four crane species at Poyang Lake, China. Front Zool 2021; 18:24. [PMID: 34001190 PMCID: PMC8130136 DOI: 10.1186/s12983-021-00411-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2020] [Accepted: 04/29/2021] [Indexed: 11/10/2022] Open
Abstract
Background Interannual variation in resource abundance has become more unpredictable, and food shortages have increasingly occurred in the recent decades. However, compared to seasonal fluctuations in resource abundance, the influences of interannual variation in resource abundance on the dietary niches of consumers remain poorly understood. Poyang Lake, China, is a very important wintering ground for the globally endangered Siberian Crane (Leucogeranus leucogeranus), White-naped Crane (Grus vipio), and Hooded Crane (G. monacha), as well as the non-endangered Eurasian Crane (G. grus). Tubers of Vallisneria spp., the dominant submerged macrophytes at Poyang Lake, is an important food for cranes. Nevertheless, submerged macrophytes have experienced serious degradation recently. In this study, we used metabarcoding technology to explore the consequences of Vallisneria tuber collapse on the diet compositions, breadths, and overlaps of the four crane species based on fecal samples collected in winter 2017 (a year with tuber collapse) and winter 2018 (a year with high tuber abundance). Results Compared to previous studies, our study elucidates crane diets in an unprecedented level of detail. Vallisneria tubers was confirmed as an important food source of cranes. Surprisingly, the grassland plant Polygonum criopolitanum was also found to be an important food source in the feces of cranes. Agricultural fields were important foraging sites for Siberian Cranes, White-naped Cranes, and Hooded Cranes, providing foods that allowed them to survive in winters with natural food shortages. However, the three crane species preferred natural wetlands to agricultural fields when the abundance of natural foods was high. The abundance of Vallisneria tubers, and probably P. criopolitanum, greatly influenced the dietary compositions, breadths and overlap of cranes. During periods of preferred resource shortage, White-naped Cranes and Hooded Cranes widened their dietary niches, while Siberian Cranes maintained a stable niche width. The dietary niche overlap among crane species increased substantially under conditions of plentiful preferred food resources. Conclusions Our study emphasizes the superior quality of natural wetlands compared to agricultural fields as foraging habitats for cranes. To provide safer and better foraging areas for cranes, it is urgent to restore the submerged plants at Poyang Lake. While high dietary niche overlap is often interpreted as intense interspecific competition, our study highlights the importance of taking food abundance into account. Supplementary Information The online version contains supplementary material available at 10.1186/s12983-021-00411-2.
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Affiliation(s)
- Jinjin Hou
- Jiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Center for Watershed Ecology, Institute of Life Science and School of Life Science, Nanchang University, Nanchang, 330031, China
| | - Lei Li
- Jiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Center for Watershed Ecology, Institute of Life Science and School of Life Science, Nanchang University, Nanchang, 330031, China.,Key Laboratory of Poyang Lake Environment and Resource Utilization, Ministry of Education, Nanchang University, Nanchang, 330031, China.,Jiangxi Poyang Lake Wetland Conservation and Restoration National Permanent Scientific Research Base, National Ecosystem Research Station of Jiangxi Poyang Lake Wetland, Nanchang, 330031, China
| | - Yafang Wang
- Jiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Center for Watershed Ecology, Institute of Life Science and School of Life Science, Nanchang University, Nanchang, 330031, China
| | - Wenjuan Wang
- Jiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Center for Watershed Ecology, Institute of Life Science and School of Life Science, Nanchang University, Nanchang, 330031, China. .,Key Laboratory of Poyang Lake Environment and Resource Utilization, Ministry of Education, Nanchang University, Nanchang, 330031, China. .,Jiangxi Poyang Lake Wetland Conservation and Restoration National Permanent Scientific Research Base, National Ecosystem Research Station of Jiangxi Poyang Lake Wetland, Nanchang, 330031, China.
| | - Huiying Zhan
- Jiangxi Poyang Lake National Nature Reserve Authority, Nanchang, 330038, China
| | - Nianhua Dai
- The Institute of Biology and Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
| | - Ping Lu
- The Institute of Biology and Resources, Jiangxi Academy of Sciences, Nanchang, 330096, China
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22
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Seewagen CL, Adams AM. Turning to the dark side: LED light at night alters the activity and species composition of a foraging bat assemblage in the northeastern United States. Ecol Evol 2021; 11:5635-5645. [PMID: 34026035 PMCID: PMC8131776 DOI: 10.1002/ece3.7466] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Revised: 03/02/2021] [Accepted: 03/04/2021] [Indexed: 11/23/2022] Open
Abstract
Artificial light at night (ALAN) is a rapidly intensifying form of environmental degradation that can impact wildlife by altering light-mediated physiological processes that control a broad range of behaviors. Although nocturnal animals are most vulnerable, ALAN's effects on North American bats have been surprisingly understudied. Most of what is known is based on decades-old observations of bats around street lights with traditional lighting technologies that have been increasingly replaced by energy-efficient broad-spectrum lighting, rendering our understanding of the contemporary effects of ALAN on North American bats even less complete. We experimentally tested the effects of broad-spectrum ALAN on presence/absence, foraging activity, and species composition in a Connecticut, USA bat community by illuminating foraging habitat with light-emitting diode (LED) floodlights and comparing acoustic recordings between light and dark conditions. Lighting dramatically decreased presence and activity of little brown bats (Myotis lucifugus), which we detected on only 14% of light nights compared with 65% of dark (lights off) and 69% of control (lights removed) nights. Big brown bat (Eptesicus fuscus) activity on light nights averaged only half that of dark and control nights. Lighting did not affect presence/absence of silver-haired bats (Lasionycteris noctivagans), but decreased their activity. There were no effects on eastern red bats (Lasiurus borealis) or hoary bats (L. cinereus), which have been described previously as light-tolerant. Aversion to lighting by some species but not others caused a significant shift in community composition, thereby potentially altering competitive balances from natural conditions. Our results demonstrate that only a small degree of ALAN can represent a significant form of habitat degradation for some North American bats, including the endangered little brown bat. Research on the extent to which different lighting technologies, colors, and intensities affect these species is urgently needed and should be a priority in conservation planning for North America's bats.
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Affiliation(s)
- Chad L. Seewagen
- Great Hollow Nature Preserve & Ecological Research CenterNew FairfieldCTUSA
- Department of Natural Resources and the EnvironmentUniversity of ConnecticutStorrsCTUSA
- Wildlife and Fisheries Conservation CenterUniversity of ConnecticutStorrsCTUSA
| | - Amanda M. Adams
- Bat Conservation InternationalAustinTXUSA
- Department of BiologyTexas A&M UniversityCollege StationTXUSA
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23
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Woodrow C, Judge KA, Pulver C, Jonsson T, Montealegre-Z F. The Ander's organ: a mechanism for anti-predator ultrasound in a relict orthopteran. J Exp Biol 2021; 224:jeb237289. [PMID: 33443038 PMCID: PMC7860129 DOI: 10.1242/jeb.237289] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 12/01/2020] [Indexed: 11/20/2022]
Abstract
The use of acoustics in predator evasion is a widely reported phenomenon amongst invertebrate taxa, but the study of ultrasonic anti-predator acoustics is often limited to the prey of bats. Here, we describe the acoustic function and morphology of a unique stridulatory structure - the Ander's organ - in the relict orthopteran Cyphoderris monstrosa (Ensifera, Hagloidea). This species is one of just eight remaining members of the family Prophalangopsidae, a group with a fossil record of over 90 extinct species widespread during the Jurassic period. We reveal that the sound produced by this organ has the characteristics of a broadband ultrasonic anti-predator defence, with a peak frequency of 58±15.5 kHz and a bandwidth of 50 kHz (at 10 dB below peak). Evidence from sexual dimorphism, knowledge on hearing capabilities and assessment of local predators, suggests that the signal likely targets ground-dwelling predators. Additionally, we reveal a previously undescribed series of cavities underneath the organ that probably function as a mechanism for ultrasound amplification. Morphological structures homologous in both appearance and anatomical location to the Ander's organ are observed to varying degrees in 4 of the 7 other extant members of this family, with the remaining 3 yet to be assessed. Therefore, we suggest that such structures may either be more widely present in this ancient family than previously assumed, or have evolved to serve a key function in the long-term survival of these few species, allowing them to outlive their extinct counterparts.
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Affiliation(s)
- Charlie Woodrow
- University of Lincoln, School of Life Sciences, Joseph Banks Laboratories, Green Lane, Lincoln LN6 7DL, UK
| | - Kevin A Judge
- Department of Biological Sciences, MacEwan University, Edmonton, Alberta, Canada T5J 4S2
| | - Christian Pulver
- University of Lincoln, School of Life Sciences, Joseph Banks Laboratories, Green Lane, Lincoln LN6 7DL, UK
| | - Thorin Jonsson
- Department of Neurobiology & Behaviour, Institute of Biology, Karl-Franzens-University Graz, Universitätsplatz 2, 8010 Graz, Austria
| | - Fernando Montealegre-Z
- University of Lincoln, School of Life Sciences, Joseph Banks Laboratories, Green Lane, Lincoln LN6 7DL, UK
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Guo D, Ding J, Liu H, Zhou L, Feng J, Luo B, Liu Y. Social calls influence the foraging behavior in wild big-footed myotis. Front Zool 2021; 18:3. [PMID: 33413435 PMCID: PMC7791762 DOI: 10.1186/s12983-020-00384-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2020] [Accepted: 12/21/2020] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Why a variety of social animals emit foraging-associated calls during group foraging remains an open question. These vocalizations may be used to recruit conspecifics to food patches (i.e. food advertisement hypothesis) or defend food resources against competitors (food defence hypothesis), presumably depending on food availability. Insectivorous bats rely heavily on vocalizations for navigation, foraging, and social interactions. In this study, we used free-ranging big-footed myotis (Myotis macrodactylus Temminck, 1840) to test whether social calls produced in a foraging context serve to advertise food patches or to ward off food competitors. Using a combination of acoustic recordings, playback experiments with adult females and dietary monitoring (light trapping and DNA metabarcoding techniques), we investigated the relationship between insect availability and social vocalizations in foraging bats. RESULTS The big-footed myotis uttered low-frequency social calls composed of 7 syllable types during foraging interactions. Although the dietary composition of bats varied across different sampling periods, Diptera, Lepidoptera, and Trichoptera were the most common prey consumed. The number of social vocalizations was primarily predicted by insect abundance, insect species composition, and echolocation vocalizations from conspecifics. The number of conspecific echolocation pulses tended to decrease following the emission of most social calls. Feeding bats consistently decreased foraging attempts and food consumption during playbacks of social calls with distinctive structures compared to control trials. The duration of flight decreased 1.29-1.96 fold in the presence of social calls versus controls. CONCLUSIONS These results support the food defence hypothesis, suggesting that foraging bats employ social calls to engage in intraspecific food competition. This study provides correlative evidence for the role of insect abundance and diversity in influencing the emission of social calls in insectivorous bats. Our findings add to the current knowledge of the function of social calls in echolocating bats.
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Affiliation(s)
- Dongge Guo
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Jianan Ding
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Heng Liu
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Lin Zhou
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China
| | - Jiang Feng
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China.,College of Life Science, Jilin Agricultural University, 2888 Xincheng Street, Changchun, 130118, China
| | - Bo Luo
- Key Laboratory of Southwest China Wildlife Resources Conservation of Ministry of Education, China West Normal University, Nanchong, 637002, China.
| | - Ying Liu
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117, China.
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25
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Tang K, Xie F, Liu H, Pu Y, Chen D, Qin B, Fu C, Wang Q, Chen S, Guo K. DNA metabarcoding provides insights into seasonal diet variations in Chinese mole shrew ( Anourosorex squamipes) with potential implications for evaluating crop impacts. Ecol Evol 2021; 11:376-389. [PMID: 33437436 PMCID: PMC7790647 DOI: 10.1002/ece3.7055] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Revised: 10/11/2020] [Accepted: 10/25/2020] [Indexed: 01/02/2023] Open
Abstract
Diet analysis of potential small mammals pest species is important for understanding feeding ecology and evaluating their impact on crops and stored foods. Chinese mole shrew (Anourosorex squamipes), distributed in Southwest China, has previously been reported as a farmland pest. Effective population management of this species requires a better understanding of its diet, which can be difficult to determine with high taxonomic resolution using conventional microhistological methods. In this study, we used two DNA metabarcoding assays to identify 38 animal species and 65 plant genera from shrew stomach contents, which suggest that A. squamipes is an omnivorous generalist. Earthworms are the most prevalent (>90%) and abundant (>80%) food items in the diverse diet of A. squamipes. Species of the Fabaceae (frequency of occurrence [FO]: 88%; such as peanuts) and Poaceae (FO: 71%; such as rice) families were the most common plant foods identified in the diet of A. squamipes. Additionally, we found a seasonal decrease in the diversity and abundance of invertebrate foods from spring and summer to winter. Chinese mole shrew has a diverse and flexible diet throughout the year to adapt to seasonal variations in food availability, contributing to its survival even when food resources are limited. This study provides a higher resolution identification of the diet of A. squamipes than has been previously described and is valuable for understanding shrew feeding ecology as well as evaluating possible species impacts on crops.
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Affiliation(s)
- Ke‐yi Tang
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Fei Xie
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Hong‐yi Liu
- College of Biology and the EnvironmentNanjing Forestry UniversityNanjingChina
| | - Ying‐ting Pu
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Dan Chen
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Bo‐xin Qin
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Chang‐kun Fu
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Qiong Wang
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Shun‐de Chen
- College of Life SciencesSichuan Normal UniversityChengduChina
| | - Ke‐ji Guo
- Central South Inventory and Planning Institute of National Forestry and Grassland AdministrationChangshaChina
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26
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Wray AK, Peery MZ, Jusino MA, Kochanski JM, Banik MT, Palmer JM, Lindner DL, Gratton C. Predator preferences shape the diets of arthropodivorous bats more than quantitative local prey abundance. Mol Ecol 2020; 30:855-873. [PMID: 33301628 DOI: 10.1111/mec.15769] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 10/27/2020] [Accepted: 11/19/2020] [Indexed: 01/03/2023]
Abstract
Although most predators are generalists, the majority of studies on the association between prey availability and prey consumption have focused on specialist predators. To investigate the role of highly generalist predators in a complex food web, we measured the relationships between prey consumption and prey availability in two common arthropodivorous bats. Specifically, we used high-throughput amplicon sequencing coupled with a known mock community to characterize seasonal changes in little brown and big brown bat diets. We then linked spatiotemporal variation in prey consumption with quantitative prey availability estimated from intensive prey community sampling. We found that although quantitative prey availability fluctuated substantially over space and time, the most commonly consumed prey items were consistently detected in bat diets independently of their respective abundance. Positive relationships between prey abundance and probability of consumption were found only among prey groups that were less frequently detected in bat diets. While the probability of prey consumption was largely unrelated to abundance, the community structure of prey detected in bat diets was influenced by the local or regional abundance of prey. Observed patterns suggest that while little brown and big brown bats maintain preferences for particular prey independently of quantitative prey availability, total dietary composition may reflect some degree of opportunistic foraging. Overall, our findings suggest that generalist predators can display strong prey preferences that persist despite quantitative changes in prey availability.
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Affiliation(s)
- Amy K Wray
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI, USA.,Department of Entomology, University of Wisconsin-Madison, Madison, WI, USA
| | - M Zachariah Peery
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI, USA
| | - Michelle A Jusino
- Center for Forest Mycology Research, Northern Research Station, USDA Forest Service, Madison, WI, USA.,Department of Plant Pathology, University of Florida, Gainesville, FL, USA
| | - Jade M Kochanski
- Department of Entomology, University of Wisconsin-Madison, Madison, WI, USA
| | - Mark T Banik
- Center for Forest Mycology Research, Northern Research Station, USDA Forest Service, Madison, WI, USA
| | - Jonathan M Palmer
- Center for Forest Mycology Research, Northern Research Station, USDA Forest Service, Madison, WI, USA
| | - Daniel L Lindner
- Center for Forest Mycology Research, Northern Research Station, USDA Forest Service, Madison, WI, USA
| | - Claudio Gratton
- Department of Entomology, University of Wisconsin-Madison, Madison, WI, USA
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27
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Tiede J, Diepenbruck M, Gadau J, Wemheuer B, Daniel R, Scherber C. Seasonal variation in the diet of the serotine bat (Eptesicus serotinus): A high-resolution analysis using DNA metabarcoding. Basic Appl Ecol 2020. [DOI: 10.1016/j.baae.2020.09.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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28
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Anich NM, White JP, Anich SE. Interspecific Territorial Behavior of Two Mourning Cloaks (Nymphalis antiopa) in Response to a Diurnally Active Big Brown Bat (Eptesicus fuscus). Northeast Nat (Steuben) 2020. [DOI: 10.1656/045.027.0308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Affiliation(s)
- Nicholas M. Anich
- Wisconsin Department of Natural Resources, 2501 Golf Course Road, Ashland, WI 54806
| | - J. Paul White
- Wisconsin Department of Natural Resources, Madison WI 53703
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29
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Abstract
The wide frequency spectrum of FM bat biosonar sounds enables accurate perception of echo delay (target distance) by contributing numerous delay estimates across frequencies. However, bats require the lowest frequencies in the broadcast to be present in echoes for all higher frequencies to contribute, too. By incorporating this feature into an existing auditory model of FM biosonar, the model can reject echoes that lack the lowest frequencies in the most recent broadcast, thus suppressing echoes of an earlier broadcast that has slightly higher low-end frequencies. This biologically inspired method adopts the bat’s frequency-hopping technique to suppress pulse-echo ambiguity in wideband systems, a serious problem for man-made wideband radar and sonar systems. Big brown bats transmit wideband FM biosonar sounds that sweep from 55 to 25 kHz (first harmonic, FM1) and from 110 to 50 kHz (second harmonic, FM2). FM1 is required to perceive echo delay for target ranging; FM2 contributes only if corresponding FM1 frequencies are present. We show that echoes need only the lowest FM1 broadcast frequencies of 25 to 30 kHz for delay perception. If these frequencies are removed, no delay is perceived. Bats begin echo processing at the lowest frequencies and accumulate perceptual acuity over successively higher frequencies, but they cannot proceed without the low-frequency starting point in their broadcasts. This reveals a solution to pulse-echo ambiguity, a serious problem for radar or sonar. In dense, extended biosonar scenes, bats have to emit sounds rapidly to avoid collisions with near objects. But if a new broadcast is emitted when echoes of the previous broadcast still are arriving, echoes from both broadcasts intermingle, creating ambiguity about which echo corresponds to which broadcast. Frequency hopping by several kilohertz from one broadcast to the next can segregate overlapping narrowband echo streams, but wideband FM echoes ordinarily do not segregate because their spectra still overlap. By starting echo processing at the lowest frequencies in frequency-hopped broadcasts, echoes of the higher hopped broadcast are prevented from being accepted by lower hopped broadcasts, and ambiguity is avoided. The bat-inspired spectrogram correlation and transformation (SCAT) model also begins at the lowest frequencies; echoes that lack them are eliminated from processing of delay and no longer cause ambiguity.
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30
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Tournayre O, Leuchtmann M, Filippi‐Codaccioni O, Trillat M, Piry S, Pontier D, Charbonnel N, Galan M. In silico and empirical evaluation of twelve metabarcoding primer sets for insectivorous diet analyses. Ecol Evol 2020; 10:6310-6332. [PMID: 32724515 PMCID: PMC7381572 DOI: 10.1002/ece3.6362] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 03/20/2020] [Accepted: 04/22/2020] [Indexed: 12/28/2022] Open
Abstract
During the most recent decade, environmental DNA metabarcoding approaches have been both developed and improved to minimize the biological and technical biases in these protocols. However, challenges remain, notably those relating to primer design. In the current study, we comprehensively assessed the performance of ten COI and two 16S primer pairs for eDNA metabarcoding, including novel and previously published primers. We used a combined approach of in silico, in vivo-mock community (33 arthropod taxa from 16 orders), and guano-based analyses to identify primer sets that would maximize arthropod detection and taxonomic identification, successfully identify the predator (bat) species, and minimize the time and financial costs of the experiment. We focused on two insectivorous bat species that live together in mixed colonies: the greater horseshoe bat (Rhinolophus ferrumequinum) and Geoffroy's bat (Myotis emarginatus). We found that primer degeneracy is the main factor that influences arthropod detection in silico and mock community analyses, while amplicon length is critical for the detection of arthropods from degraded DNA samples. Our guano-based results highlight the importance of detecting and identifying both predator and prey, as guano samples can be contaminated by other insectivorous species. Moreover, we demonstrate that amplifying bat DNA does not reduce the primers' capacity to detect arthropods. We therefore recommend the simultaneous identification of predator and prey. Finally, our results suggest that up to one-third of prey occurrences may be unreliable and are probably not of primary interest in diet studies, which may decrease the relevance of combining several primer sets instead of using a single efficient one. In conclusion, this study provides a pragmatic framework for eDNA primer selection with respect to scientific and methodological constraints.
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Affiliation(s)
- Orianne Tournayre
- CBGPINRAECIRADIRDMontpellier SupAgroUniversité de MontpellierMontpellierFrance
| | | | - Ondine Filippi‐Codaccioni
- LabEx ECOFECT “Ecoevolutionary Dynamics of Infectious DiseasesUniversité de LyonLyonFrance
- CNRSLaboratoire de Biométrie et Biologie ÉvolutiveUMR5558Université de LyonUniversité Lyon 1VilleurbanneFrance
| | - Marine Trillat
- CBGPINRAECIRADIRDMontpellier SupAgroUniversité de MontpellierMontpellierFrance
| | - Sylvain Piry
- CBGPINRAECIRADIRDMontpellier SupAgroUniversité de MontpellierMontpellierFrance
| | - Dominique Pontier
- LabEx ECOFECT “Ecoevolutionary Dynamics of Infectious DiseasesUniversité de LyonLyonFrance
- CNRSLaboratoire de Biométrie et Biologie ÉvolutiveUMR5558Université de LyonUniversité Lyon 1VilleurbanneFrance
| | - Nathalie Charbonnel
- CBGPINRAECIRADIRDMontpellier SupAgroUniversité de MontpellierMontpellierFrance
| | - Maxime Galan
- CBGPINRAECIRADIRDMontpellier SupAgroUniversité de MontpellierMontpellierFrance
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31
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Estimation of trophic niches in myrmecophagous spider predators. Sci Rep 2020; 10:8683. [PMID: 32457437 PMCID: PMC7250852 DOI: 10.1038/s41598-020-65623-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2019] [Accepted: 04/09/2020] [Indexed: 11/21/2022] Open
Abstract
Among spiders, taxonomically the most diversified group of terrestrial predators, only a few species are stenophagous and feed on ants. The levels of stenophagy and ant-specialisation vary among such species. To investigate whether stenophagy is only a result of a local specialisation both fundamental and realised trophic niches need to be estimated. Here we investigated trophic niches in three closely-related spider species from the family Gnaphosidae (Callilepis nocturna, C. schuszteri, Nomisia exornata) with different levels of myrmecophagy. Acceptance experiments were used to estimate fundamental trophic niches and molecular methods to estimate realised trophic niches. For the latter two PCR primer sets were used as these can affect the niche breadth estimates. The general invertebrate ZBJ primers were not appropriate for detecting ant DNA as they revealed very few prey types, therefore ant-specific primers were used. The cut-off threshold for erroneous MOTUs was identified as 0.005% of the total number of valid sequences, at individual predator level it was 0.05%. The fundamental trophic niche of Callilepis species included mainly ants, while that of N. exornata included many different prey types. The realised trophic niche in Callilepis species was similar to its fundamental niche but in N. exornata the fundamental niche was wider than realised niche. The results show that Callilepis species are ant-eating (specialised) stenophagous predators, catching mainly Formicinae ants, while N. exornata is an ant-eating euryphagous predator catching mainly Myrmicinae ants.
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32
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Magalhães de Oliveira HF, Camargo NF, Hemprich-Bennett DR, Rodríguez-Herrera B, Rossiter SJ, Clare EL. Wing morphology predicts individual niche specialization in Pteronotus mesoamericanus (Mammalia: Chiroptera). PLoS One 2020; 15:e0232601. [PMID: 32392221 PMCID: PMC7213686 DOI: 10.1371/journal.pone.0232601] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2019] [Accepted: 04/17/2020] [Indexed: 12/30/2022] Open
Abstract
Morphological variation between individuals can increase niche segregation and decrease intraspecific competition when heterogeneous individuals explore their environment in different ways. Among bat species, wing shape correlates with flight maneuverability and habitat use, with species that possess broader wings typically foraging in more cluttered habitats. However, few studies have investigated the role of morphological variation in bats for niche partitioning at the individual level. To determine the relationship between wing shape and diet, we studied a population of the insectivorous bat species Pteronotus mesoamericanus in the dry forest of Costa Rica. Individual diet was resolved using DNA metabarcoding, and bat wing shape was assessed using geometric morphometric analysis. Inter-individual variation in wing shape showed a significant relationship with both dietary dissimilarity based on Bray-Curtis estimates, and nestedness derived from an ecological network. Individual bats with broader and more rounded wings were found to feed on a greater diversity of arthropods (less nested) in comparison to individuals with triangular and pointed wings (more nested). We conclude that individual variation in bat wing morphology can impact foraging efficiency leading to the observed overall patterns of diet specialization and differentiation within the population.
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Affiliation(s)
- Hernani Fernandes Magalhães de Oliveira
- Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, United States of America
- School of Biological and Chemical Sciences, Queen Mary University of London, London, England, United Kingdom
| | | | - David R. Hemprich-Bennett
- School of Biological and Chemical Sciences, Queen Mary University of London, London, England, United Kingdom
- Department of Zoology, University of Oxford, Oxford, England, United Kingdom
| | | | - Stephen J. Rossiter
- School of Biological and Chemical Sciences, Queen Mary University of London, London, England, United Kingdom
| | - Elizabeth L. Clare
- School of Biological and Chemical Sciences, Queen Mary University of London, London, England, United Kingdom
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33
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Shutt JD, Nicholls JA, Trivedi UH, Burgess MD, Stone GN, Hadfield JD, Phillimore AB. Gradients in richness and turnover of a forest passerine's diet prior to breeding: A mixed model approach applied to faecal metabarcoding data. Mol Ecol 2020; 29:1199-1213. [PMID: 32100904 DOI: 10.1111/mec.15394] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Revised: 02/18/2020] [Accepted: 02/20/2020] [Indexed: 02/06/2023]
Abstract
Rather little is known about the dietary richness and variation of generalist insectivorous species, including birds, due primarily to difficulties in prey identification. Using faecal metabarcoding, we provide the most comprehensive analysis of a passerine's diet to date, identifying the relative magnitudes of biogeographic, habitat and temporal trends in the richness and turnover in diet of Cyanistes caeruleus (blue tit) along a 39 site and 2° latitudinal transect in Scotland. Faecal samples were collected in 2014-2015 from adult birds roosting in nestboxes prior to nest building. DNA was extracted from 793 samples and we amplified COI and 16S minibarcodes. We identified 432 molecular operational taxonomic units that correspond to putative dietary items. Most dietary items were rare, with Lepidoptera being the most abundant and taxon-rich prey order. Here, we present a statistical approach for estimation of gradients and intersample variation in taxonomic richness and turnover using a generalised linear mixed model. We discuss the merits of this approach over existing tools and present methods for model-based estimation of repeatability, taxon richness and Jaccard indices. We found that dietary richness increases significantly as spring advances, but changes little with elevation, latitude or local tree composition. In comparison, dietary composition exhibits significant turnover along temporal and spatial gradients and among sites. Our study shows the promise of faecal metabarcoding for inferring the macroecology of food webs, but we also highlight the challenge posed by contamination and make recommendations of laboratory and statistical practices to minimise its impact on inference.
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Affiliation(s)
- Jack D Shutt
- Institute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK
| | - James A Nicholls
- Institute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK
| | - Urmi H Trivedi
- Edinburgh Genomics, The University of Edinburgh, Edinburgh, UK
| | - Malcolm D Burgess
- Centre for Research in Animal Behaviour, University of Exeter, Exeter, UK.,RSPB Centre for Conservation Science, The Lodge, Sandy, UK
| | - Graham N Stone
- Institute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK
| | - Jarrod D Hadfield
- Institute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK
| | - Albert B Phillimore
- Institute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK
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Shi B, Wang Y, Gong L, Chang Y, Liu T, Zhao X, Lin A, Feng J, Jiang T. Correlation of skull morphology and bite force in a bird-eating bat ( Ia io; Vespertilionidae). Front Zool 2020; 17:8. [PMID: 32206076 PMCID: PMC7082990 DOI: 10.1186/s12983-020-00354-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Accepted: 03/11/2020] [Indexed: 04/05/2023] Open
Abstract
Background Genetic and ecological factors influence morphology, and morphology is compatible with function. The morphology and bite performance of skulls of bats show a number of characteristic feeding adaptations. The great evening bat, Ia io (Thomas, 1902), eats both insects and birds (Thabah et al. J Mammal 88: 728-735, 2007), and as such, it is considered to represent a case of dietary niche expansion from insects to birds. How the skull morphology or bite force in I. io are related to the expanded diet (that is, birds) remains unknown. We used three-dimensional (3D) geometry of the skulls and measurements of bite force and diets from I. io and 13 other species of sympatric or closely related bat species to investigate the characteristics and the correlation of skull morphology and bite force to diets. Results Significant differences in skull morphology and bite force among species and diets were observed in this study. Similar to the carnivorous bats, bird-eaters (I. io) differed significantly from insectivorous bats; I. io had a larger skull size, taller crania, wider zygomatic arches, shorter but robust mandibles, and larger bite force than the insectivores. The skull morphology of bats was significantly associated with bite force whether controlling for phylogeny or not, but no significant correlations were found between diets and the skulls, or between diets and residual bite force, after controlling for phylogeny. Conclusions These results indicated that skull morphology was independent of diet, and phylogeny had a greater impact on skull morphology than diet in these species. The changes in skull size and morphology have led to variation in bite force, and finally different bat species feeding on different foods. In conclusion, I. io has a larger skull size, robust mandibles, shortened dentitions, longer coronoid processes, expanded angular processes, low condyles, and taller cranial sagittal crests, and wider zygomatic arches that provide this species with mechanical advantages; their greater bite force may help them use larger and hard-bodied birds as a dietary component.
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Affiliation(s)
- Biye Shi
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
| | - Yuze Wang
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
| | - Lixin Gong
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
| | - Yang Chang
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
| | - Tong Liu
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
| | - Xin Zhao
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
| | - Aiqing Lin
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
| | - Jiang Feng
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,3College of Life Science, Jilin Agricultural University, 2888 Xincheng Street, Changchun, 130118 China
| | - Tinglei Jiang
- 1Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China.,2Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, 2555 Jingyue Street, Changchun, 130117 China
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35
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Morningstar DE, Robinson CV, Shokralla S, Hajibabaei M. Interspecific competition in bats and diet shifts in response to white‐nose syndrome. Ecosphere 2019. [DOI: 10.1002/ecs2.2916] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Affiliation(s)
- Derek E. Morningstar
- Department of Integrative Biology University of Guelph Guelph Ontario N1G2W1 Canada
| | - Chloe V. Robinson
- Department of Integrative Biology University of Guelph Guelph Ontario N1G2W1 Canada
- Centre for Biodiversity Genomics & Department of Integrative Biology University of Guelph Guelph Ontario N1G2W1 Canada
| | - Shadi Shokralla
- Department of Integrative Biology University of Guelph Guelph Ontario N1G2W1 Canada
- Centre for Biodiversity Genomics & Department of Integrative Biology University of Guelph Guelph Ontario N1G2W1 Canada
| | - Mehrdad Hajibabaei
- Department of Integrative Biology University of Guelph Guelph Ontario N1G2W1 Canada
- Centre for Biodiversity Genomics & Department of Integrative Biology University of Guelph Guelph Ontario N1G2W1 Canada
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36
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Metabarcoding-based dietary analysis of hen harrier (Circus cyaneus) in Great Britain using buccal swabs from chicks. CONSERV GENET 2019. [DOI: 10.1007/s10592-019-01215-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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Andriollo T, Gillet F, Michaux JR, Ruedi M. The menu varies with metabarcoding practices: A case study with the bat Plecotus auritus. PLoS One 2019; 14:e0219135. [PMID: 31276547 PMCID: PMC6611578 DOI: 10.1371/journal.pone.0219135] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Accepted: 06/17/2019] [Indexed: 11/19/2022] Open
Abstract
Metabarcoding of feces has revolutionized the knowledge of animal diets by providing unprecedented resolution of consumed resources. However, it is still unclear how different methodological approaches influence the ecological conclusions that can be drawn from such data. Here, we propose a critical evaluation of several data treatments on the inferred diet of the bat Plecotus auritus using guano regularly collected from various colonies throughout the entire active season. First and unlike previous claims, our data indicates that DNA extracted from large amounts of fecal material issued from guano accumulates yield broader taxonomic diversity of prey than smaller numbers of pellets would do, provided that extraction buffer volumes are adapted to such increased amounts of material. Second, trophic niche analyses based on prey occurrence data uncover strong seasonality in the bat’s diet and major differences among neighboring maternity colonies. Third, while the removal of rare prey items is not always warranted as it introduces biases affecting particularly samples with greater prey species richness. Fourth, examination of distinct taxonomic depths in diet analyses highlights different aspects of food consumption providing a better understanding of the consumer’s diet. Finally, the biologically meaningful patterns recovered with presence-absence approaches are virtually lost when attempting to quantify prey consumed using relative read abundances. Even in an ideal situation where reference barcodes are available for most potential prey species, inferring realistic patterns of prey consumption remains relatively challenging. Although best practice in metabarcoding analyses will depend on the aims of the study, several previous methodological recommendations seem unwarranted for studying such diverse diets as that of brown long-eared bats.
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Affiliation(s)
- Tommy Andriollo
- Department of Mammalogy and Ornithology, Natural History Museum of Geneva, CP, CH, Geneva, Switzerland
- Section of Biology, Faculty of Sciences, University of Geneva, Quai Ernest-Ansermet, Geneva, Switzerland
| | - François Gillet
- Laboratoire de Génétique de la Conservation, Université de Liège, Institut de Botanique B22, Liège, Belgium
- Comportement et Écologie de la Faune Sauvage (CEFS), Institut National de la Recherche Agronomique, Auzeville, Castanet-Tolosan Cedex, France
| | - Johan R. Michaux
- Laboratoire de Génétique de la Conservation, Université de Liège, Institut de Botanique B22, Liège, Belgium
- CIRAD, Agirs Unit, TA C- 22/E- Campus international de Baillarguet, Montpellier Cedex, France
| | - Manuel Ruedi
- Department of Mammalogy and Ornithology, Natural History Museum of Geneva, CP, CH, Geneva, Switzerland
- * E-mail:
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38
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Chang Y, Song S, Li A, Zhang Y, Li Z, Xiao Y, Jiang T, Feng J, Lin A. The roles of morphological traits, resource variation and resource partitioning associated with the dietary niche expansion in the fish-eating bat Myotis pilosus. Mol Ecol 2019; 28:2944-2954. [PMID: 31063664 DOI: 10.1111/mec.15127] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2018] [Revised: 04/27/2019] [Accepted: 04/29/2019] [Indexed: 12/29/2022]
Abstract
Niche expansion and shifts are involved in the response and adaptation to environmental changes. However, it is unclear how niche breadth evolves and changes toward higher-quality resources. Myotis pilosus is both an insectivore and a piscivore. We examined the dietary composition and seasonality in M. pilosus and the closely related Myotis fimbriatus using next-generation DNA sequencing. We tested whether resource variation or resource partitioning help explain the dietary expansion from insects to fish in M. pilosus. While diet composition and diversity varied significantly between summer and autumn, the proportion of fish-eating individuals did not significantly change between seasons in M. pilosus. Dietary overlap between M. pilosus and M. fimbriatus during the same seasons was much higher than within individual species across seasons. We recorded a larger body size, hind foot length, and body mass in M. pilosus than in M. fimbriatus and other insectivorous trawling bats from China. Similar morphological differences were found between worldwide fishing bats and nonfishing trawling bats. Our results suggest that variation in insect availability or interspecific competition may not play important roles in the dietary expansion from insects to fish in M. pilosus. Myotis pilosus has morphological advantages that may help it use fish as a diet component. The morphological advantage promoting dietary niche evolution toward higher quality resources may be more important than variation in the original resource and the effects of interspecific competition.
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Affiliation(s)
- Yang Chang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China.,Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, Changchun, China
| | - Shengjing Song
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China
| | - Aoqiang Li
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China
| | - Yu Zhang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China
| | - Zhongle Li
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China.,College of Life Science, Jilin Agricultural University, Changchun, China
| | - Yanhong Xiao
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China
| | - Tinglei Jiang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China
| | - Jiang Feng
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China.,Key Laboratory of Vegetation Ecology of Education Ministry, Institute of Grassland Science, Northeast Normal University, Changchun, China.,College of Life Science, Jilin Agricultural University, Changchun, China
| | - Aiqing Lin
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China.,Acoustic and Functional Ecology Group, Max Planck Institute for Ornithology, Seewiesen, Germany
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39
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Kravchenko KA, Lehnert LS, Vlaschenko AS, Voigt CC. Multiple isotope tracers in fur keratin discriminate between mothers and offspring. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2019; 33:907-913. [PMID: 30786112 DOI: 10.1002/rcm.8417] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Revised: 02/14/2019] [Accepted: 02/15/2019] [Indexed: 06/09/2023]
Abstract
RATIONALE Isoscape origin models for mammals may be impaired by fractionation and routing of isotopes during lactation. Here, we tested if the stable carbon, nitrogen and hydrogen ratios of juvenile bats differ from those of their mothers and if derived isotopic dietary niches and geographical assignments vary accordingly between mothers and juveniles. METHODS During the post-lactation period, we collected fur of juvenile and female common noctule bats (Nyctalus noctula) from the same maternity roost. Using a combination of elemental analysis and stable isotope ratio mass spectrometry, we measured the hydrogen, carbon and nitrogen isotope ratios in fur keratin. The hydrogen isotope ratios were measured for the non-exchangeable portion of hydrogen in keratin. The derived isotopic niches and isoscape origin models were compared between mothers and juveniles. RESULTS The fur keratin of juveniles was enriched by 1.6‰ in 15 N and depleted by 2.9‰ in 13 C compared with that of the mothers. In addition, the hydrogen isotope ratios were 13.4‰ lower in the fur keratin of juveniles than in that of mothers. The estimated isotopic niches of nursing females and juveniles were not overlapping and differed in size. Overall, the isoscape origin models projected juveniles as being from a more northern origin than the mothers; yet both models suggested the study site as a likely place of origin. CONCLUSIONS Our results suggest that isotope ratio data of juvenile bats should not be used for transfer functions in isoscape origin models because of isotopic routing and discrimination during lactation. Not accounting for age effects may increase the inaccuracy of geographical assignments in mammals when based on stable hydrogen isotopes.
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Affiliation(s)
- Kseniia A Kravchenko
- Leibniz Institute for Zoo and Wildlife Research, Alfred-Kowalke-Str. 17, 10315, Berlin, Germany
- Institute for Biology, Freie Universität Berlin, Königin-Luise-Str. 1-3, 14195, Berlin, Germany
| | - Linn S Lehnert
- Leibniz Institute for Zoo and Wildlife Research, Alfred-Kowalke-Str. 17, 10315, Berlin, Germany
- Institute for Biology, Freie Universität Berlin, Königin-Luise-Str. 1-3, 14195, Berlin, Germany
| | - Anton S Vlaschenko
- Bat Rehabilitation Center of Feldman Ecopark, 62340, Lisne, Kharkiv Region, Ukraine
- Ukrainian Independent Ecology Institute, 61001, Kharkiv, Ukraine
| | - Christian C Voigt
- Leibniz Institute for Zoo and Wildlife Research, Alfred-Kowalke-Str. 17, 10315, Berlin, Germany
- Institute for Biology, Freie Universität Berlin, Königin-Luise-Str. 1-3, 14195, Berlin, Germany
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40
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Bailey LA, Brigham RM, Bohn SJ, Boyles JG, Smit B. An experimental test of the allotonic frequency hypothesis to isolate the effects of light pollution on bat prey selection. Oecologia 2019; 190:367-374. [DOI: 10.1007/s00442-019-04417-w] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2018] [Accepted: 05/07/2019] [Indexed: 11/25/2022]
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41
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Lacher TE, Davidson AD, Fleming TH, Gómez-Ruiz EP, McCracken GF, Owen-Smith N, Peres CA, Vander Wall SB. The functional roles of mammals in ecosystems. J Mammal 2019. [DOI: 10.1093/jmammal/gyy183] [Citation(s) in RCA: 55] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Affiliation(s)
- Thomas E Lacher
- Department of Wildlife and Fisheries Sciences, Texas A&M University, College Station, TX, USA
- Global Wildlife Conservation, Austin, TX, USA
| | - Ana D Davidson
- Department of Fish, Wildlife, and Conservation Biology, Colorado State University, Fort Collins, CO, USA
- Colorado Natural Heritage Program, Colorado State University, Fort Collins, CO, USA
| | - Theodore H Fleming
- Emeritus, Department of Biology, University of Miami, Coral Gables, FL, USA
| | - Emma P Gómez-Ruiz
- Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México
| | - Gary F McCracken
- Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, USA
| | - Norman Owen-Smith
- Centre for African Ecology, School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Wits, South Africa
| | - Carlos A Peres
- School of Environmental Sciences, University of East Anglia, Norwich, United Kingdom
| | - Stephen B Vander Wall
- Department of Biology and the Program in Ecology, Evolution and Conservation Biology, University of Nevada, Reno, NV, USA
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42
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Jusino MA, Banik MT, Palmer JM, Wray AK, Xiao L, Pelton E, Barber JR, Kawahara AY, Gratton C, Peery MZ, Lindner DL. An improved method for utilizing high-throughput amplicon sequencing to determine the diets of insectivorous animals. Mol Ecol Resour 2019; 19:176-190. [PMID: 30281913 DOI: 10.1111/1755-0998.12951] [Citation(s) in RCA: 66] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2017] [Revised: 08/01/2018] [Accepted: 09/19/2018] [Indexed: 11/30/2022]
Abstract
DNA analysis of predator faeces using high-throughput amplicon sequencing (HTS) enhances our understanding of predator-prey interactions. However, conclusions drawn from this technique are constrained by biases that occur in multiple steps of the HTS workflow. To better characterize insectivorous animal diets, we used DNA from a diverse set of arthropods to assess PCR biases of commonly used and novel primer pairs for the mitochondrial gene, cytochrome oxidase C subunit 1 (COI). We compared diversity recovered from HTS of bat guano samples using a commonly used primer pair "ZBJ" to results using the novel primer pair "ANML." To parameterize our bioinformatics pipeline, we created an arthropod mock community consisting of single-copy (cloned) COI sequences. To examine biases associated with both PCR and HTS, mock community members were combined in equimolar amounts both pre- and post-PCR. We validated our system using guano from bats fed known diets and using composite samples of morphologically identified insects collected in pitfall traps. In PCR tests, the ANML primer pair amplified 58 of 59 arthropod taxa (98%), whereas ZBJ amplified 24-40 of 59 taxa (41%-68%). Furthermore, in an HTS comparison of field-collected samples, the ANML primers detected nearly fourfold more arthropod taxa than the ZBJ primers. The additional arthropods detected include medically and economically relevant insect groups such as mosquitoes. Results revealed biases at both the PCR and sequencing levels, demonstrating the pitfalls associated with using HTS read numbers as proxies for abundance. The use of an arthropod mock community allowed for improved bioinformatics pipeline parameterization.
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Affiliation(s)
- Michelle A Jusino
- United States Department of Agriculture, Forest Service, Northern Research Station, Center for Forest Mycology Research, Madison, Wisconsin.,Department of Plant Pathology, University of Florida, Gainesville, Florida
| | - Mark T Banik
- United States Department of Agriculture, Forest Service, Northern Research Station, Center for Forest Mycology Research, Madison, Wisconsin
| | - Jonathan M Palmer
- United States Department of Agriculture, Forest Service, Northern Research Station, Center for Forest Mycology Research, Madison, Wisconsin
| | - Amy K Wray
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, Wisconsin
| | - Lei Xiao
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, Florida
| | - Emma Pelton
- Department of Entomology, University of Wisconsin-Madison, Madison, Wisconsin.,The Xerces Society for Invertebrate Conservation, Portland, Oregon
| | - Jesse R Barber
- Department of Biological Sciences, Graduate Program in Ecology, Evolution and Behavior, Boise State University, Boise, Idaho
| | - Akito Y Kawahara
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, Florida
| | - Claudio Gratton
- Department of Entomology, University of Wisconsin-Madison, Madison, Wisconsin
| | - M Zachariah Peery
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, Wisconsin
| | - Daniel L Lindner
- United States Department of Agriculture, Forest Service, Northern Research Station, Center for Forest Mycology Research, Madison, Wisconsin
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43
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Gordon R, Ivens S, Ammerman LK, Fenton MB, Littlefair JE, Ratcliffe JM, Clare EL. Molecular diet analysis finds an insectivorous desert bat community dominated by resource sharing despite diverse echolocation and foraging strategies. Ecol Evol 2019; 9:3117-3129. [PMID: 30962885 PMCID: PMC6434550 DOI: 10.1002/ece3.4896] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2018] [Revised: 12/12/2018] [Accepted: 12/13/2018] [Indexed: 01/05/2023] Open
Abstract
Interspecific differences in traits can alter the relative niche use of species within the same environment. Bats provide an excellent model to study niche use because they use a wide variety of behavioral, acoustic, and morphological traits that may lead to multi-species, functional groups. Predatory bats have been classified by their foraging location (edge, clutter, open space), ability to use aerial hawking or substrate gleaning and echolocation call design and flexibility, all of which may dictate their prey use. For example, high frequency, broadband calls do not travel far but offer high object resolution while high intensity, low frequency calls travel further but provide lower resolution. Because these behaviors can be flexible, four behavioral categories have been proposed: (a) gleaning, (b) behaviorally flexible (gleaning and hawking), (c) clutter-tolerant hawking, and (d) open space hawking. Many recent studies of diet in bats use molecular tools to identify prey but mainly focus on one or two species in isolation; few studies provide evidence for substantial differences in prey use despite the many behavioral, acoustic, and morphological differences. Here, we analyze the diet of 17 sympatric species in the Chihuahuan desert and test the hypothesis that peak echolocation frequency and behavioral categories are linked to differences in diet. We find no significant correlation between dietary richness and echolocation peak frequency though it spanned close to 100 kHz across species. Our data, however, suggest that bats which use both gleaning and hawking strategies have the broadest diets and are most differentiated from clutter-tolerant aerial hawking species.
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Affiliation(s)
- Rowena Gordon
- School of Biological and Chemical SciencesQueen Mary University of LondonLondonUK
| | - Sally Ivens
- School of Biological and Chemical SciencesQueen Mary University of LondonLondonUK
| | | | - M. Brock Fenton
- Department of BiologyUniversity of Western OntarioLondonOntarioCanada
| | - Joanne E. Littlefair
- School of Biological and Chemical SciencesQueen Mary University of LondonLondonUK
- Department of BiologyMcGill UniversityMontréalQuébecCanada
| | - John M. Ratcliffe
- Department of BiologyUniversity of Toronto MississaugaMississaugaOntarioCanada
| | - Elizabeth L. Clare
- School of Biological and Chemical SciencesQueen Mary University of LondonLondonUK
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44
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Torres-Flores JW, López-Wilchis R. Trophic Niche and Diet of Natalus Mexicanus (Chiroptera: Natalidae) in a Tropical Dry Forest of Western Mexico. ACTA CHIROPTEROLOGICA 2019. [DOI: 10.3161/15081109acc2018.20.2.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- José Williams Torres-Flores
- Departamento de Biología, Universidad Autónoma Metropolitana Iztapalapa, Avenida San Rafael Atlixco No. 186, Col. Vicentina, Del. Iztapalapa, C.P. 09340, Ciudad de México, México
| | - Ricardo López-Wilchis
- Departamento de Biología, Universidad Autónoma Metropolitana Iztapalapa, Avenida San Rafael Atlixco No. 186, Col. Vicentina, Del. Iztapalapa, C.P. 09340, Ciudad de México, México
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45
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Clare EL, Fazekas AJ, Ivanova NV, Floyd RM, Hebert PDN, Adams AM, Nagel J, Girton R, Newmaster SG, Fenton MB. Approaches to integrating genetic data into ecological networks. Mol Ecol 2018; 28:503-519. [PMID: 30427082 DOI: 10.1111/mec.14941] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Accepted: 10/25/2018] [Indexed: 01/03/2023]
Abstract
As molecular tools for assessing trophic interactions become common, research is increasingly focused on the construction of interaction networks. Here, we demonstrate three key methods for incorporating DNA data into network ecology and discuss analytical considerations using a model consisting of plants, insects, bats and their parasites from the Costa Rica dry forest. The simplest method involves the use of Sanger sequencing to acquire long sequences to validate or refine field identifications, for example of bats and their parasites, where one specimen yields one sequence and one identification. This method can be fully quantified and resolved and these data resemble traditional ecological networks. For more complex taxonomic identifications, we target multiple DNA loci, for example from a seed or fruit pulp sample in faeces. These networks are also well resolved but gene targets vary in resolution and quantification is difficult. Finally, for mixed templates such as faecal contents of insectivorous bats, we use DNA metabarcoding targeting two sequence lengths (157 and 407 bp) of one gene region and a MOTU, BLAST and BIN association approach to resolve nodes. This network type is complex to generate and analyse, and we discuss the implications of this type of resolution on network analysis. Using these data, we construct the first molecular-based network of networks containing 3,304 interactions between 762 nodes of eight trophic functions and involving parasitic, mutualistic and predatory interactions. We provide a comparison of the relative strengths and weaknesses of these data types in network ecology.
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Affiliation(s)
- Elizabeth L Clare
- School of Biological and Chemical Sciences, Queen Mary University of London, London, UK.,Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada
| | - Aron J Fazekas
- The Arboretum, University of Guelph, Guelph, Ontario, Canada
| | - Natalia V Ivanova
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada
| | - Robin M Floyd
- Wellcome-MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK
| | - Paul D N Hebert
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada
| | - Amanda M Adams
- Department of Biology, Texas A&M University, College Station, Texas
| | - Juliet Nagel
- Center for Environmental Science, University of Maryland, Frostburg, Maryland
| | - Rebecca Girton
- School of Biological and Chemical Sciences, Queen Mary University of London, London, UK
| | - Steven G Newmaster
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada
| | - M Brock Fenton
- Department of Biology, University of Western Ontario, London, Ontario, Canada
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46
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Alberdi A, Aizpurua O, Bohmann K, Gopalakrishnan S, Lynggaard C, Nielsen M, Gilbert MTP. Promises and pitfalls of using high‐throughput sequencing for diet analysis. Mol Ecol Resour 2018; 19:327-348. [DOI: 10.1111/1755-0998.12960] [Citation(s) in RCA: 91] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 09/19/2018] [Accepted: 10/05/2018] [Indexed: 11/28/2022]
Affiliation(s)
- Antton Alberdi
- Section for Evolutionary Genomics, Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
| | - Ostaizka Aizpurua
- Section for Evolutionary Genomics, Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
| | - Kristine Bohmann
- Section for Evolutionary Genomics, Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
- School of Biological Sciences University of East Anglia Norwich Norfolk UK
| | - Shyam Gopalakrishnan
- Section for Evolutionary Genomics, Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
| | - Christina Lynggaard
- Section for Evolutionary Genomics, Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
| | - Martin Nielsen
- Section for Evolutionary Genomics, Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
| | - Marcus Thomas Pius Gilbert
- Section for Evolutionary Genomics, Natural History Museum of Denmark University of Copenhagen Copenhagen Denmark
- NTNU University Museum Trondheim Norway
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47
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Gorresen PM, Brinck KW, DeLisle MA, Montoya-Aiona K, Pinzari CA, Bonaccorso FJ. Multi-state occupancy models of foraging habitat use by the Hawaiian hoary bat (Lasiurus cinereus semotus). PLoS One 2018; 13:e0205150. [PMID: 30379835 PMCID: PMC6209161 DOI: 10.1371/journal.pone.0205150] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Accepted: 09/20/2018] [Indexed: 11/19/2022] Open
Abstract
Multi-state occupancy modeling can often improve assessments of habitat use and site quality when animal activity or behavior data are available. We examine the use of the approach for evaluating foraging habitat suitability of the endangered Hawaiian hoary bat (Lasiurus cinereus semotus) from classifications of site occupancy based on flight activity levels and feeding behavior. In addition, we used data from separate visual and auditory sources, namely thermal videography and acoustic (echolocation) detectors, jointly deployed at sample sites to compare the effectiveness of each method in the context of occupancy modeling. Video-derived observations demonstrated higher and more accurate estimates of the prevalence of high bat flight activity and feeding events than acoustic sampling methods. Elevated levels of acoustic activity by Hawaiian hoary bats were found to be related primarily to beetle biomass in this study. The approach may have a variety of applications in bat research, including inference about species-resource relationships, habitat quality and the extent to which species intensively use areas for activities such as foraging.
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Affiliation(s)
- P. Marcos Gorresen
- Hawai‘i Cooperative Studies Unit, University of Hawai‘i at Hilo, Hilo, Hawai‘i, United States of America
- * E-mail:
| | - Kevin W. Brinck
- Hawai‘i Cooperative Studies Unit, University of Hawai‘i at Hilo, Hilo, Hawai‘i, United States of America
| | - Megan A. DeLisle
- Hawai‘i Cooperative Studies Unit, University of Hawai‘i at Hilo, Hilo, Hawai‘i, United States of America
| | - Kristina Montoya-Aiona
- U.S. Geological Survey, Pacific Island Ecosystems Research Center, Hawaii National Park, Hawai‘i, United States of America
| | - Corinna A. Pinzari
- Hawai‘i Cooperative Studies Unit, University of Hawai‘i at Hilo, Hilo, Hawai‘i, United States of America
| | - Frank J. Bonaccorso
- U.S. Geological Survey, Pacific Island Ecosystems Research Center, Hawaii National Park, Hawai‘i, United States of America
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48
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Littlefair JE, Zander A, Sena Costa C, Clare EL. DNA
metabarcoding reveals changes in the contents of carnivorous plants along an elevation gradient. Mol Ecol 2018; 28:281-292. [DOI: 10.1111/mec.14832] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2017] [Revised: 07/03/2018] [Accepted: 07/28/2018] [Indexed: 11/28/2022]
Affiliation(s)
- Joanne E. Littlefair
- Department of Biology McGill University Montréal Québec Canada
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| | - Axel Zander
- Department of Biology Unit of Ecology and Evolution University of Fribourg Fribourg Switzerland
| | - Clara Sena Costa
- School of Biological and Chemical Sciences Queen Mary University of London London UK
| | - Elizabeth L. Clare
- School of Biological and Chemical Sciences Queen Mary University of London London UK
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49
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Early erratic flight response of the lucerne moth to the quiet echolocation calls of distant bats. PLoS One 2018; 13:e0202679. [PMID: 30125318 PMCID: PMC6101402 DOI: 10.1371/journal.pone.0202679] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Accepted: 08/07/2018] [Indexed: 11/19/2022] Open
Abstract
Nocturnal insects have evolved ultrasound-sensitive hearing in response to predation pressures from echolocating insectivorous bats. Flying tympanate moths take various evasive actions when they detect bat cries, including turning away, performing a steering/zigzagging flight and ceasing flight. In general, infrequent ultrasonic pulses with low sound intensities that are emitted by distant bats evoke slight turns, whereas frequent and loud ultrasonic pulses of nearby bats evoke erratic or rapid unpredictable changes in the flight path of a moth. Flight cessation, which is a freezing response that causes the moth to passively dive (drop) to the ground, is considered the ultimate last-ditch evasive behaviour against approaching bats where there is a high predation threat. Here, we found that the crambid moth Nomophila nearctica never performed passive dives in response to frequent and loud ultrasonic pulses of >60 dB sound pressure level (SPL) that simulated the attacking echolocation call sequence of the predominant sympatric insectivorous bat Eptesicus fuscus, but rather turned away or flew erratically, regardless of the temporal structure of the stimulus. Consequently, N. nearctica is likely to survive predation by bats by taking early evasive action even when it detects the echolocation calls of sympatric bats hunting other insects at a distance. Since aerially hawking bats can track and catch erratically flying moths after targeting their prey, this early escape strategy may be common among night-flying tympanate insects.
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50
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Leavell BC, Rubin JJ, McClure CJW, Miner KA, Branham MA, Barber JR. Fireflies thwart bat attack with multisensory warnings. SCIENCE ADVANCES 2018; 4:eaat6601. [PMID: 30140743 PMCID: PMC6105302 DOI: 10.1126/sciadv.aat6601] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2018] [Accepted: 07/15/2018] [Indexed: 05/09/2023]
Abstract
Many defended animals prevent attacks by displaying warning signals that are highly conspicuous to their predators. We hypothesized that bioluminescing fireflies, widely known for their vibrant courtship signals, also advertise their noxiousness to echolocating bats. To test this postulate, we pit naïve big brown bats (Eptesicus fuscus) against chemically defended fireflies (Photinus pyralis) to examine whether and how these beetles transmit salient warnings to bats. We demonstrate that these nocturnal predators learn to avoid noxious fireflies using either vision or echolocation and that bats learn faster when integrating information from both sensory streams-providing fundamental evidence that multisensory integration increases the efficacy of warning signals in a natural predator-prey system. Our findings add support for a warning signal origin of firefly bioluminescence and suggest that bat predation may have driven evolution of firefly bioluminescence.
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Affiliation(s)
- Brian C. Leavell
- Department of Biological Sciences, Boise State University, Boise, ID 83725, USA
| | - Juliette J. Rubin
- Department of Biological Sciences, Boise State University, Boise, ID 83725, USA
| | - Christopher J. W. McClure
- Department of Biological Sciences, Boise State University, Boise, ID 83725, USA
- The Peregrine Fund, Boise, ID 83709, USA
| | - Krystie A. Miner
- Department of Biological Sciences, Boise State University, Boise, ID 83725, USA
| | - Marc A. Branham
- Department of Entomology and Nematology, University of Florida, Gainesville, FL 32611, USA
| | - Jesse R. Barber
- Department of Biological Sciences, Boise State University, Boise, ID 83725, USA
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