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Carisse O, Vincent S, Lafond-Lapalme J, Fall ML, Van der Heyden H. Quantitative Insights into Grapevine Anthracnose ( Elsinoë ampelina) Epidemiology: Impact of Temperature and Leaf Age on Incubation, Lesion Development, and Sporulation. PLANT DISEASE 2024:PDIS11232478RE. [PMID: 38736151 DOI: 10.1094/pdis-11-23-2478-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2024]
Abstract
Grapevine anthracnose, caused by Elsinoë ampelina, is one of the most devastating diseases for wine and table grapes, particularly in hot, humid regions. This study explores how temperature and leaf age affect incubation and how temperature affects lesion development and sporulation. The influence of temperature and leaf age on incubation period (days) was tested under controlled conditions. Leaves from 1 to 8 days old were inoculated and maintained at temperatures of 5, 10, 15, 20, 25, and 30°C. The time elapsed between inoculation and the emergence of initial lesions was recorded. The effect of temperature on lesion development and sporulation was investigated under vineyard conditions. This was achieved through artificial inoculations, with 17, 11, and 11 inoculations conducted in 2016, 2017, and 2018, respectively. The average incubation period, considering all leaf ages, was 27.50 days at 5°C, 15.10 days at 10°C, 9.70 days at 15°C, 5.90 days at 20°C, 3.70 days at 25°C, and 2.26 days at 30°C. Regardless of temperature, the average incubation period was 3.6, 5.9, 8.3, 9.8, 11.9, 13.4, 15.6, and 17.1 days for leaves 1, 2, 3, 4, 5, 6, 7, and 8 days old, respectively. The exponential decay model accurately describes the incubation period as a function of both temperature and leaf age. On average, the relative lesion development (RLD) was 0.00, 0.00, 0.23, 0.47, 0.72, 0.93, 0.92, 0.90, 0.94, and 1.0 at 0, 1, 2, 3, 4, 5, 6, 7, 8, and 9 days after inoculation, respectively. The average relative sporulation (RSPO) was 0.03, 0.36, 0.82, 0.96, and 1.0 at 5, 10, 15, 20, and 25 days after inoculation, respectively. Both RLD and RSPO as a function of degree-days (Tbase = 0°C) since inoculation were well described by the logistic function. The rates of change in RLD and RSPO were 0.055 and 0.032, respectively. The results of this study provide new quantitative insights into three important stages (monocyclic processes) in the development of grapevine anthracnose caused by E. ampelina.
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Affiliation(s)
- Odile Carisse
- Saint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC J3B 3E6, Canada
| | - Samuel Vincent
- Department of Mathematics, Université de Sherbrooke, Sherbrooke, QC J1K 2R1, Canada
| | - Joël Lafond-Lapalme
- Saint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC J3B 3E6, Canada
| | - Mamadou Lamine Fall
- Saint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC J3B 3E6, Canada
| | - Hervé Van der Heyden
- Saint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC J3B 3E6, Canada
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Zhang L, Wang Z, Zhang C, Zhou S, Yuan C. Metabolomics analysis based on UHPLC-QqQ-MS/MS to discriminate grapes and wines from different geographical origins and climatological characteristics. Food Chem X 2024; 22:101396. [PMID: 38699585 PMCID: PMC11063387 DOI: 10.1016/j.fochx.2024.101396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 04/15/2024] [Accepted: 04/16/2024] [Indexed: 05/05/2024] Open
Abstract
With the proliferation of the consumer's awareness of wine provenance, wines with unique origin characteristics are increasingly in demand. This study aimed to investigate the influence of geographical origins and climatological characteristics on grapes and wines. A total of 94 anthocyanins and 78 non-anthocyanin phenolic compounds in grapes and wines from five Chinese viticultural vineyards (CJ, WH, QTX, WW, and XY) were identified by UHPLC-QqQ-MS/MS. Chemometric methods PCA and OPLS-DA were established to select candidate differential metabolites, including flavonols, stilbenes, hydroxycinnamic acids, peonidin derivatives, and malvidin derivatives. CCA showed that malvidin-3-O-glucoside had a positive correlation with mean temperature, and quercetin-3-O-glucoside had a negative correlation with precipitation. In addition, enrichment analysis elucidated that the metabolic diversity in different origins mainly occurred in flavonoid biosynthesis. This study would provide some new insights to understand the effect of geographical origins and climatological characteristics on phenolic compounds in grapes and wines.
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Affiliation(s)
- Lin Zhang
- College of Enology, Northwest A&F University, Yangling 712100, China
| | - Zhaoxiang Wang
- College of Enology, Northwest A&F University, Yangling 712100, China
| | - Cui Zhang
- College of Enology, Northwest A&F University, Yangling 712100, China
- Xinjiang Bainian Manor Wines & Spirits Co., Ltd, China
| | - Shubo Zhou
- College of Enology, Northwest A&F University, Yangling 712100, China
| | - Chunlong Yuan
- College of Enology, Northwest A&F University, Yangling 712100, China
- Ningxia Helan Mountain's East Foothill Wine Experiment and Demonstration Station of Northwest A&F University, Yongning, Ningxia 750104, China
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3
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Zhang Y, Jiao B, Zhao Q, Wang C, Chen A, Cui Y, He Y, Li J. Determination, temporal variation and potential health risk assessment of pesticide residues in grapes from South and Southwest China. Food Addit Contam Part A Chem Anal Control Expo Risk Assess 2024; 41:287-302. [PMID: 38295304 DOI: 10.1080/19440049.2024.2309256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Accepted: 01/19/2024] [Indexed: 02/02/2024]
Abstract
Pesticide residues in grapes from South and Southwest China were determined using the QuEChERS procedure and UHPLC-MS/MS and GC-MS/MS methods. The 4-year monitoring and survey showed 94.6% of the 1341 samples of grapes collected from eight main production areas contained one or multiple pesticide residues (above the respective LOQs). Overall, 40 pesticides were detected, including 24 fungicides, 12 insecticides, 2 acaricides and 2 plant growth modulators, of which one pesticide was unauthorised for use in treating grapes. Two or more pesticide residues were discovered in 87.4% of the samples (above the respective LOQs), and pesticide residues in 5.7% of the samples exceeded the MRLs, such as difenoconazole, cyhalothrin, propiconazole, etc. The main risk factors affecting the safety of grape before 2019 were difenoconazole, cyhalothrin and cyazofamid. After 2019, however, the frequency of occurrence of the above pesticides significantly declined, and the banned or restricted pesticides including omethoate were not found, which was credited to the stricter supervision and management policies by local governments. Despite the high detection rates and multi-residue occurrence of pesticides in grapes, about 84% of the samples were compliant with regulatory standards. Moreover, the accumulative chronic diet risk determined from ADI is very low. This study and timely monitoring can ensure that grape growers comply with GAP and minimise the occurrence of residues.
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Affiliation(s)
- Yaohai Zhang
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
| | - Bining Jiao
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
| | - Qiyang Zhao
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
| | - Chengqiu Wang
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
| | - Aihua Chen
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
| | - Yongliang Cui
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
| | - Yue He
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
| | - Jing Li
- Citrus Research Institute, Southwest University, Chongqing, PR China
- Quality Supervision and Testing Center for Citrus and Seedling, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Key Laboratory of Quality and Safety Control of Citrus Fruits, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- Laboratory of Quality and Safety Risk Assessment for Citrus Products, Ministry of Agriculture and Rural Affairs, Chongqing, PR China
- National Citrus Engineering Research Center, Chongqing, PR China
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Carisse O, Provost C. Cluster Zone Leaf Removal Reduces the Rate of Anthracnose ( Elsinöe ampelina) Progress and Facilitates Its Control. PLANT DISEASE 2024; 108:608-615. [PMID: 37700478 DOI: 10.1094/pdis-07-23-1305-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/14/2023]
Abstract
Anthracnose caused by Elsinöe ampelina is an economically important disease that affects certain hardy and semihardy grapevine cultivars. The control of this disease requires repeated application of fungicides, which has financial and environmental consequences. In this study, leaf removal in the cluster area was studied with a view to facilitating integrated anthracnose management. First, the effect of leaf removal timing (BBCH stage 53 or 71) and intensity (one or both sides of rows) on the progression of anthracnose and on the microclimate was studied in plots planted with Vidal blanc (Vitis vinifera) at two sites in both 2020 and 2021. Overall, at both sites and in both years, anthracnose on leaves was more severe in plots without cluster zone leaf removal. Regardless of the timing of leaf removal, anthracnose severity on leaves and incidence of infected berries at harvest were significantly lower in plots where leaves had been removed on both sides of the rows compared with plots where leaves were removed on one side only. Second, anthracnose management programs with leaf removal, with or without disease risk estimation, were evaluated. All anthracnose management programs including leaf removal in the cluster zone reduced anthracnose development compared with the standard program without leaf removal. Overall mean leaf anthracnose severity, severity at harvest, and anthracnose incidence on clusters at harvest were lower in plots with leaf removal than in the standard program, but the differences between the two treatments were not significant (P > 0.05). More fungicide applications were made in plots managed using the standard programs, specifically 13 applications, compared with plots managed based on assessing the weather-related risk of anthracnose, with 9 and 10 applications made at sites 1 and 2 for the risk-based program, respectively, and 5 and 7 applications made at sites 1 and 2, respectively, when microclimate within the cluster zone was considered. The results of this study clearly show the important role that leaf removal can play in managing grape anthracnose.
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Affiliation(s)
- Odile Carisse
- Saint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC J3B 3E6, Canada
| | - Caroline Provost
- Centre de recherche agroalimentaire de Mirabel, Mirabel, QC J7N 2X8, Canada
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5
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Pham NQ, Duong TA, Wingfield BD, Barnes I, Durán A, Wingfield MJ. Characterisation of the mating-type loci in species of Elsinoe causing scab diseases. Fungal Biol 2023; 127:1484-1490. [PMID: 38097322 DOI: 10.1016/j.funbio.2023.11.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 11/08/2023] [Accepted: 11/10/2023] [Indexed: 12/18/2023]
Abstract
The genus Elsinoe includes many aggressive plant pathogens that infect various economically important agricultural, horticultural and forestry plants. Significant diseases include citrus scab caused by E. fawcettii and E. australis, grapevine spot anthracnose by E. ampelina, and the emerging Eucalyptus scab and shoot malformation disease caused by the recently described E. necatrix. Despite their importance as plant pathogens, little is known regarding the biology of many Elsinoe spp. To gain insights into the reproductive biology of these fungi, we characterized the mating-type loci of seven species using whole genome sequence data. Results showed that the MAT1 locus organization and its flanking genes is relatively conserved in most cases. All seven species manifested a typical heterothallic mating system characterized by having either the MAT1-1 or MAT1-2 idiomorph present in an isolate. These idiomorphs were defined by the MAT1-1-1 or the MAT1-2-1 gene, respectively. A unique MAT1-1 idiomorph containing a truncated MAT1-2-1 gene, and a MAT1-1-1 gene, was identified in E. necatrix and E. fawcettii genomes. Additionally, two idiomorph-specific proteins were found in the MAT1-1 and MAT1-2 idiomorphs of E. australis. Universal mating-type markers confirmed heterothallism across 21 Elsinoe spp., are poised to advance future studies regarding the biology of these fungi.
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Affiliation(s)
- N Q Pham
- Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028, South Africa.
| | - T A Duong
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028, South Africa
| | - B D Wingfield
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028, South Africa
| | - I Barnes
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028, South Africa
| | - A Durán
- Plant Health Program, Research and Development, Asia Pacific Resources International Holdings Ltd. (APRIL), Pangkalan Kerinci, 28300, Riau, Indonesia
| | - M J Wingfield
- Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028, South Africa
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6
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Hsieh TF, Shen YM, Huang JH, Tsai JN, Lu MT, Lin CP. Insights into Grape Ripe Rot: A Focus on the Colletotrichum gloeosporioides Species Complex and Its Management Strategies. PLANTS (BASEL, SWITZERLAND) 2023; 12:2873. [PMID: 37571026 PMCID: PMC10421077 DOI: 10.3390/plants12152873] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 07/27/2023] [Accepted: 08/03/2023] [Indexed: 08/13/2023]
Abstract
Grape ripe rot, which is predominantly caused by the Colletotrichum species, presents a growing threat to global grape cultivation. This threat is amplified by the increasing populations of the Colletotrichum species in response to warmer climates. In this review, we investigate the wide-ranging spectrum of grape ripe rot, specifically highlighting the role and characteristics of the C. gloeosporioides species complex (CGSC). We incorporate this understanding as we explore the diverse symptoms that lead to infected grapevines, their intricate life cycle and epidemiology, and the escalating prevalence of C. viniferum in Asia and globally. Furthermore, we delve into numerous disease management strategies, both conventional and emerging, such as prevention and mitigation measures. These strategies include the examination of host resistances, beneficial cultivation practices, sanitation measures, microbiome health maintenance, fungicide choice and resistance, as well as integrated management approaches. This review seeks to enhance our understanding of this globally significant disease, aspiring to assist in the development and improvement of effective prevention and control strategies.
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Affiliation(s)
- Ting-Fang Hsieh
- Plant Pathology Division, Taiwan Agricultural Research Institute, Taichung City 41362, Taiwan; (T.-F.H.); (J.-H.H.); (J.-N.T.)
| | - Yuan-Min Shen
- Master Program for Plant Medicine, College of Bio-Resources and Agriculture, National Taiwan University, Taipei 10617, Taiwan;
| | - Jin-Hsing Huang
- Plant Pathology Division, Taiwan Agricultural Research Institute, Taichung City 41362, Taiwan; (T.-F.H.); (J.-H.H.); (J.-N.T.)
| | - Jyh-Nong Tsai
- Plant Pathology Division, Taiwan Agricultural Research Institute, Taichung City 41362, Taiwan; (T.-F.H.); (J.-H.H.); (J.-N.T.)
| | - Ming-Te Lu
- Crop Science Division, Taiwan Agricultural Research Institute, Taichung City 41326, Taiwan;
| | - Chu-Ping Lin
- Plant Pathology Division, Taiwan Agricultural Research Institute, Taichung City 41362, Taiwan; (T.-F.H.); (J.-H.H.); (J.-N.T.)
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7
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Wingfield BD, Berger DK, Coetzee MPA, Duong TA, Martin A, Pham NQ, van den Berg N, Wilken PM, Arun-Chinnappa KS, Barnes I, Buthelezi S, Dahanayaka BA, Durán A, Engelbrecht J, Feurtey A, Fourie A, Fourie G, Hartley J, Kabwe ENK, Maphosa M, Narh Mensah DL, Nsibo DL, Potgieter L, Poudel B, Stukenbrock EH, Thomas C, Vaghefi N, Welgemoed T, Wingfield MJ. IMA genome‑F17 : Draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina. IMA Fungus 2022; 13:19. [PMID: 36411457 PMCID: PMC9677705 DOI: 10.1186/s43008-022-00104-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/30/2022] [Indexed: 11/22/2022] Open
Affiliation(s)
- Brenda D. Wingfield
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Dave K. Berger
- grid.49697.350000 0001 2107 2298Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028 South Africa
| | - Martin P. A. Coetzee
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Tuan A. Duong
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Anke Martin
- grid.1048.d0000 0004 0473 0844Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD 4350 Australia
| | - Nam Q. Pham
- grid.49697.350000 0001 2107 2298Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028 South Africa
| | - Noelani van den Berg
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - P. Markus Wilken
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Kiruba Shankari Arun-Chinnappa
- grid.1048.d0000 0004 0473 0844Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD 4350 Australia ,PerkinElmer Pty Ltd., Level 2, Building 5, Brandon Business Park, 530‑540, Springvale Road, Glen Waverley, VIC 3150 Australia
| | - Irene Barnes
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Sikelela Buthelezi
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | | | - Alvaro Durán
- Plant Health Program, Research and Development, Asia Pacific Resources International Holdings Ltd. (APRIL), Pangkalan Kerinci, Riau 28300 Indonesia
| | - Juanita Engelbrecht
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Alice Feurtey
- grid.419520.b0000 0001 2222 4708Environmental Genomics, Max Planck Institute for Evolutionary Biology, 24306 Plön, Germany ,grid.9764.c0000 0001 2153 9986Environmental Genomics, Christian-Albrechts University of Kiel, 24118 Kiel, Germany
| | - Arista Fourie
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Gerda Fourie
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Jesse Hartley
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Eugene N. K. Kabwe
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Centre for Bioinformatics and Computational Biology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Mkhululi Maphosa
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Deborah L. Narh Mensah
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa ,grid.423756.10000 0004 1764 1672CSIR, Food Research Institute, Accra, Ghana
| | - David L. Nsibo
- grid.49697.350000 0001 2107 2298Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028 South Africa
| | - Lizel Potgieter
- grid.419520.b0000 0001 2222 4708Environmental Genomics, Max Planck Institute for Evolutionary Biology, 24306 Plön, Germany ,grid.9764.c0000 0001 2153 9986Environmental Genomics, Christian-Albrechts University of Kiel, 24118 Kiel, Germany
| | - Barsha Poudel
- grid.1048.d0000 0004 0473 0844Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD 4350 Australia
| | - Eva H. Stukenbrock
- grid.419520.b0000 0001 2222 4708Environmental Genomics, Max Planck Institute for Evolutionary Biology, 24306 Plön, Germany ,grid.9764.c0000 0001 2153 9986Environmental Genomics, Christian-Albrechts University of Kiel, 24118 Kiel, Germany
| | - Chanel Thomas
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Niloofar Vaghefi
- grid.1048.d0000 0004 0473 0844Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD 4350 Australia ,grid.1008.90000 0001 2179 088XSchool of Agriculture and Food, University of Melbourne, Parkville, VIC 3010 Australia
| | - Tanya Welgemoed
- grid.49697.350000 0001 2107 2298Department of Biochemistry, Genetics and Microbiology, Centre for Bioinformatics and Computational Biology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - Michael J. Wingfield
- grid.49697.350000 0001 2107 2298Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028 South Africa
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Töpfer R, Trapp O. A cool climate perspective on grapevine breeding: climate change and sustainability are driving forces for changing varieties in a traditional market. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2022; 135:3947-3960. [PMID: 35389053 PMCID: PMC9729149 DOI: 10.1007/s00122-022-04077-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Accepted: 03/07/2022] [Indexed: 05/04/2023]
Abstract
A multitude of diverse breeding goals need to be combined in a new cultivar, which always forces to compromise. The biggest challenge grapevine breeders face is the extraordinarily complex trait of wine quality, which is the all-pervasive and most debated characteristic. Since the 1920s, Germany runs continuous grapevine breeding programmes. This continuity was the key to success and lead to various new cultivars on the market, so called PIWIs. Initially, introduced pests and diseases such as phylloxera, powdery and downy mildew were the driving forces for breeding. However, preconceptions about the wine quality of new resistant selections impeded the market introduction. These preconceptions are still echoing today and may be the reason in large parts of the viticultural community for: (1) ignoring substantial breeding progress, and (2) sticking to successful markets of well-known varietal wines or blends (e.g. Chardonnay, Cabernet Sauvignon, Riesling). New is the need to improve viticulture´s sustainability and to adapt to changing environmental conditions. Climate change with its extreme weather will impose the need for a change in cultivars in many wine growing regions. Therefore, a paradigm shift is knocking on the door: new varieties (PIWIs) versus traditional varieties for climate adapted and sustainable viticulture. However, it will be slow process and viticulture is politically well advised to pave the way to variety innovation. In contrast to the widely available PIWIs, competitive cultivars created by means of new breeding technologies (NBT, e.g. through CRISPR/Cas) are still decades from introduction to the market.
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Affiliation(s)
- Reinhard Töpfer
- Julius Kühn-Institut, Federal Research Centre for Cultivated Plants, Institute for Grapevine Breeding Geilweilerhof, Siebeldingen, Germany.
| | - Oliver Trapp
- Julius Kühn-Institut, Federal Research Centre for Cultivated Plants, Institute for Grapevine Breeding Geilweilerhof, Siebeldingen, Germany
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Shecori S, Kher MM, Tyagi K, Lerno L, Netzer Y, Lichter A, Ebeler SE, Drori E. A Field Collection of Indigenous Grapevines as a Valuable Repository for Applied Research. PLANTS (BASEL, SWITZERLAND) 2022; 11:2563. [PMID: 36235429 PMCID: PMC9570891 DOI: 10.3390/plants11192563] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Revised: 09/20/2022] [Accepted: 09/20/2022] [Indexed: 12/01/2022]
Abstract
The grapevine is an economically important plant, with a historical connection to the development of human culture. Currently, over 6000 accessions are known as individual grapevine varieties, some of which are important to national heritage, valuable for current viticultural practices, and as genetic resources to maintain plasticity under changing climatic conditions, environmental sustainability, and market demands. Recently, the diversity of cultivated grapevines has declined significantly, due to the increased focus of global wine industries on a few major cultivars. Moreover, due to biotic and abiotic stresses, the wild V. vinifera germplasm's genetic diversity has declined, with some varieties on the verge of extinction. Vitis germplasm conservation can be achieved via either in situ (e.g., protected areas) or Ex situ (e.g., field collections, seed banks, and tissue culture collections) methods. This study aims to highlight the importance of Vitis field bank collections. We demonstrate the research done in the Israeli indigenous Vitis vinifera collection. The multi-layer analysis of the varieties enabled the identification of drought stress-resistant varieties, and suggested a mechanism for this resistance through noting the dramatic phenological differences in foliage development between resistant and sensitive varieties. In addition, we show a general characterization of the varieties via major grape characteristics, including bunch and berry shape, as well as their possible utilization based on their aromatic and phenolic profiles.
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Affiliation(s)
- Shani Shecori
- Chemical Engineering Department, Ariel University, Ariel 40700, Israel
| | | | - Kamal Tyagi
- Horticulture Section, SIPS, Cornell University, Ithaca, NY 14853, USA
| | - Larry Lerno
- Department of Viticulture and Enology, University of California, Davis, CA 95616, USA
| | - Yishai Netzer
- Chemical Engineering Department, Ariel University, Ariel 40700, Israel
- Eastern Regional R&D Center, Ariel 40700, Israel
| | - Amnon Lichter
- Department of Postharvest Science, The Volcani Institute, Rishon LeZion 7528809, Israel
| | - Susan E. Ebeler
- Department of Viticulture and Enology, University of California, Davis, CA 95616, USA
| | - Elyashiv Drori
- Chemical Engineering Department, Ariel University, Ariel 40700, Israel
- Eastern Regional R&D Center, Ariel 40700, Israel
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