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Dantes W, Boatwright L, Cieniewicz E. Comparing RT-PCR of individual samples with high throughput sequencing of pooled plant samples for field-level surveillance of viruses in blackberry and wild Rubus. Plant Dis 2024. [PMID: 38557244 DOI: 10.1094/pdis-11-23-2428-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
Blackberry production is increasing in the southeastern U.S. with the availability of new cultivars. In addition to high production costs, growers are challenged by virus diseases. Blackberry yellow vein disease (BVYD) significantly limits blackberry production. BYVD is associated with the crinivirus blackberry yellow vein-associated virus (BYVaV) in mixed infections with other viruses. The specific disease etiology and ecological factors underlying BYVD are not well understood and rely on the effective diagnosis of several viruses involved in the complex. In 2021, we collected samples from blackberry plants showing BYVD symptoms, asymptomatic blackberry plants, and wild Rosaceae spp. from nine farms across South Carolina, for a total of 372 individual plant samples. RNA from individual samples was isolated and pooled into sample groups (i.e., symptomatic, asymptomatic, and wild) from each farm for a total of 24 pooled samples. We sequenced the pooled RNA using Illumina and analyzed sequence profiles using the Virtool bioinformatics application. We also tested each plant for six viruses by RT-PCR or RT-qPCR and compared plant (PCR)-level and field (high throughput sequencing (HTS))-level data. Virtool detected 17 known viruses in the pooled samples, including 11 blackberry viruses. PCR testing was mostly consistent with HTS, with some notable disagreements for specific viruses. Our study demonstrates that HTS could be used as an efficient tool to detect viruses in bulked samples in blackberry fields, though limitations to using HTS for field-level surveillance are also discussed here.
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Affiliation(s)
- Wanita Dantes
- Clemson University, 2545, Plant and Environmental Sciences, 105 Sikes Hall, Clemson, South Carolina, United States, 29634-0002;
| | - Lucas Boatwright
- Corteva Agriscience LLC, 70112, Indianapolis, Indiana, United States;
| | - Elizabeth Cieniewicz
- Clemson University, Plant and Environmental Sciences, 105 Collings St., 216 Biosystems Research Complex, Clemson, South Carolina, United States, 29634;
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Weiland JE, Scagel CF, Benedict C, Wasko-DeVetter L, Beck BR. Fungicide sensitivity of Phytophthora isolates from the Washington red raspberry industry. Plant Dis 2024. [PMID: 38468135 DOI: 10.1094/pdis-12-23-2641-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/13/2024]
Abstract
Phytophthora rubi is an important pathogen causing Phytophthora root rot of red raspberries worldwide. Management of this disease is partially achieved with fungicides, but efficacy has been low and growers are concerned about fungicide resistance. To determine whether fungicide resistance is developing, Phytophthora species were isolated from 26 raspberry fields with root rot, identified, and evaluated for sensitivity to four fungicides: mefenoxam, phosphorous acid, oxathiapiprolin, and dimethomorph. The majority of the recovered 152 Phytophthora isolates were P. rubi (143 isolates, 25 fields), with P. megasperma (8 isolates, 2 fields) and P. gonapodyides (1 isolate, 1 field) being found much less frequently. These results confirm P. rubi as the dominant species affecting the Washington red raspberry industry. Almost all tested isolates were sensitive to all four fungicide chemistries, although three isolates were less sensitive to mefenoxam with EC50 values ranging from 3.53 to 100 µg ai/ml. No resistance was detected against current fungicide label rates. However, other reasons were identified for why fungicides have been ineffective. Label rates vary widely by brand and most fungicides are applied in the fall when P. rubi is inactive. In addition, some phosphorous acid products are only labeled for foliar applications, which have been shown to be less effective than soil applications in other agricultural systems. Efficacy trials are needed to compare foliar and soil fungicide applications at different times of the year for their ability to control Phytophthora root rot in red raspberry production fields.
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Affiliation(s)
- Jerry E Weiland
- USDA-ARS Horticultural Crops Research Unit, 57752, Horticultural Crops Disease and Pest Management Research Unit, Corvallis, Oregon, United States;
| | - Carolyn F Scagel
- USDA-ARS National Clonal Germplasm Repository, 57753, Corvallis, Oregon, United States;
| | - Chris Benedict
- Washington State University Whatcom County Extension, Bellingham, Washington, United States;
| | - Lisa Wasko-DeVetter
- Washington State University, Northwestern Washington Research and Extension Center, Mount Vernon, Washington, United States;
| | - Bryan R Beck
- USDA-ARS Horticultural Crops Disease and Pest Management Research Unit, Corvallis, Oregon, United States;
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Dėlkus M, Žižytė-Eidetienė M, Ivanauskas A, Valiunas D. First Report of Lingonberry Stunted Yellows Disease of Vaccinium vitis-idaea L. associated with ' Candidatus Phytoplasma trifolii'-Related Phytoplasma Strain in Lithuania. Plant Dis 2024. [PMID: 38457635 DOI: 10.1094/pdis-02-24-0284-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/10/2024]
Abstract
Lingonberries (Vaccinium vitis-idaea L.) are low-growing, evergreen shrubs of cooler, northern regions of North America and Europe. These plants produce berries that are unique in flavor, bear high economic significance, and play a vital role in maintaining the diversity of the northern ecosystems (Kowalska, 2021). In October 2023 diseased plants of lingonberry were discovered in Labanoras Forest (55°14'N 25°42'E) (Lithuania). The plants expressed symptoms of stunting, yellowing, little leaf, shortened internodes, and stem distortions. Samples (leaves) were collected and tested from ten asymptomatic and ten symptomatic lingonberry plants. Total genomic DNAs of all samples were extracted by a CTAB protocol. Extracted DNAs were used as a template in direct and nested PCRs using the universal primer pairs P1/P7 and R16F2n/R2, respectively, to amplify phytoplasma 16S rRNA gene 1.2 kb fragments (Lee et al. 1998). The primer pairs SecAFor1/SecARev3 and SecAFor2/SecARev3 were used in direct and semi-nested PCRs, respectively, to amplify phytoplasma secA genes 0.5 kb fragment (Dickinson and Hodgetts, 2013). PCR amplicons of the 16S rRNA and secA genes specific for the phytoplasmas were only obtained from all sampled symptomatic plants. Three R16F2n/R2 and three SecAFor2/SecARev3 amplicons were cloned and submitted for Sanger sequencing (Nature Research Centre, Vilnius, Lithuania by 3500 Genetic Analyser). The three 16S rDNAs as well as the three secA gene fragments were identical. The BLAST analysis (NCBI) of the obtained sequences showed a similarity percentage, ranging from 99.75% to 100% (1247-1250 bp from 1250 bp) for 16SrRNA, and 98.13% to 99,15% (473-478 bp from 482 bp) for secA amplicons, with numerous strains of 'Candidatus (Ca.) Phytoplasma (P.) trifolii' (first hit MT674293 and KR906724, respectively). Additionally, 16S rDNA sequences by using iPhyClassifier were used to create virtual RFLP pattern (Zhao et al. 2009). The generated pattern was identical (similarity coefficient 1.00) to the reference pattern of 16Sr group VI, subgroup A. The phytoplasma strain detected in lingonberries was designated as lingonberry stunted yellows, LingbSY. Furthermore, the enzymatic RFLP analysis was performed with the 14 restriction enzymes (Lee et al., 1998), and obtained profiles were compared with virtually generated using iPhyClassifier. This yielded the same classification of detected phytoplasma to the 16SrVI-A phytoplasma subgroup. The phylogenetic analysis of both marker gene sequences revealed the same LingbSY phytoplasma classification. Selected sequences were deposited in GenBank (NCBI) with Accession No: PP237769 (16S rRNA gene) and No: PP238489 (secA gene). Phytoplasmas of 16SrI phytoplasma group were identified in lingonberries in Canada (Brochu et al. 2022). Strains of 16SrVI phytoplasma group were reported in Vaccinium myrtillus in Austria (Fernandez et al. 2007). This is the first report of 'Ca. P. trifolii' strain belonging to 16SrVI-A phytoplasma subgroup infecting lingonberry worldwide. Also, this is the first report of 16SrVI phytoplasma group in Lithuania. The presence of this phytoplasma poses a threat to the natural ecosystem and could eventually spread into agricultural settings in our country. Therefore, it's crucial to conduct surveillance for insect vectors, and assess effective control methods. Without proactive action, long term sustainability of lingonberries and their ecosystems may be jeopardized.
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Affiliation(s)
- Martynas Dėlkus
- Nature Research Centre, 282393, Laboratory of Plant Pathology, Vilnius, Lithuania;
| | | | - Algirdas Ivanauskas
- Nature Research Centre, 282393, Laboratory of Plant Pathology, Vilnius, Lithuania;
| | - Deividas Valiunas
- Nature Research Centre, 282393, Laboratory of Plant Pathology, Akademijos St. 2, Vilnius, Lithuania, 08412
- United States;
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Carisse O, Provost C. Cluster Zone Leaf Removal Reduces the Rate of Anthracnose ( Elsinöe ampelina) Progress and Facilitates Its Control. Plant Dis 2024; 108:608-615. [PMID: 37700478 DOI: 10.1094/pdis-07-23-1305-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/14/2023]
Abstract
Anthracnose caused by Elsinöe ampelina is an economically important disease that affects certain hardy and semihardy grapevine cultivars. The control of this disease requires repeated application of fungicides, which has financial and environmental consequences. In this study, leaf removal in the cluster area was studied with a view to facilitating integrated anthracnose management. First, the effect of leaf removal timing (BBCH stage 53 or 71) and intensity (one or both sides of rows) on the progression of anthracnose and on the microclimate was studied in plots planted with Vidal blanc (Vitis vinifera) at two sites in both 2020 and 2021. Overall, at both sites and in both years, anthracnose on leaves was more severe in plots without cluster zone leaf removal. Regardless of the timing of leaf removal, anthracnose severity on leaves and incidence of infected berries at harvest were significantly lower in plots where leaves had been removed on both sides of the rows compared with plots where leaves were removed on one side only. Second, anthracnose management programs with leaf removal, with or without disease risk estimation, were evaluated. All anthracnose management programs including leaf removal in the cluster zone reduced anthracnose development compared with the standard program without leaf removal. Overall mean leaf anthracnose severity, severity at harvest, and anthracnose incidence on clusters at harvest were lower in plots with leaf removal than in the standard program, but the differences between the two treatments were not significant (P > 0.05). More fungicide applications were made in plots managed using the standard programs, specifically 13 applications, compared with plots managed based on assessing the weather-related risk of anthracnose, with 9 and 10 applications made at sites 1 and 2 for the risk-based program, respectively, and 5 and 7 applications made at sites 1 and 2, respectively, when microclimate within the cluster zone was considered. The results of this study clearly show the important role that leaf removal can play in managing grape anthracnose.
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Affiliation(s)
- Odile Carisse
- Saint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC J3B 3E6, Canada
| | - Caroline Provost
- Centre de recherche agroalimentaire de Mirabel, Mirabel, QC J7N 2X8, Canada
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Cieniewicz E, Schnabel E, Powell G, Snipes Z, Schnabel G. Detection and characterization of Xylella fastidiosa subsp. fastidiosa in rabbiteye blueberry in South Carolina. Plant Dis 2024. [PMID: 38254326 DOI: 10.1094/pdis-11-23-2392-sc] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
Xylella fastidiosa causes bacterial leaf scorch in southern highbush (Vaccinium corymbosum interspecific hybrids) and is also associated with a distinct disease phenotype in rabbiteye blueberry (V. virgatum) cultivars in the southeastern U.S. Both subspecies X.f. fastidiosa and X.f. multiplex have been reported to cause problems in southern highbush blueberry, but so far only X.f. multiplex has been reported in rabbiteye cultivars in Louisiana. In this study, we report detection of X. fastidiosa in rabbiteye blueberry plants in association with symptoms of foliar reddening and shoot dieback. High throughput sequencing of a X. fastidiosa-positive plant sample and comparative analyses identified the strain in one of these plants as being X. fastidiosa subspecies fastidiosa. We briefly discuss the implications of these findings, which may spur research into blueberry as a potential inoculum source that could enable spread to other susceptible fruit crops in South Carolina.
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Affiliation(s)
- Elizabeth Cieniewicz
- Clemson University, Plant and Environmental Sciences, 105 Collings St., 216 Biosystems Research Complex, Clemson, South Carolina, United States, 29634;
| | - Elise Schnabel
- Clemson University, 2545, Plant and Environmental Sciences, Clemson, South Carolina, United States;
| | - Garner Powell
- Clemson University College of Agriculture Forestry and Life Sciences, 114625, Plant and Environmental Sciences, Clemson, South Carolina, United States;
| | - Zachary Snipes
- Clemson University, 2545, Clemson Cooperative Extension, Charleston, South Carolina, United States;
| | - Guido Schnabel
- Clemson University, Entomology, Soils, and Plant Sciences, 120 Long Hall, Clemson, South Carolina, United States, 29634-0315;
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Wei C, Zhang W, Liang J, Cui L, Cui Z, Wang W, Cheng DJ, Wang X. First Report of Leaf Spot on Cucumis melo L. Caused by Arcopilus aureus in China. Plant Dis 2024. [PMID: 38173266 DOI: 10.1094/pdis-11-23-2343-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
Cucumis melo L. is an important fruit with widespread consumption and commercial value. However, an undescribed disease affecting Hami melon (Cucumis melo L. var. Luhoutian) plants has consistently emerged in the Qihe region of Dezhou, Shandong Province of China since 2021. The disease can occur in both seedling and mature stages of Hami melon plants, and in severely diseased areas, the incidence rate was seen as 40 to 80%. During the seedling stage, the initial symptom is the appearance of water-soaked spots on the leaves. As the disease progresses, the leaves develop necrotic spots, and severely affected plants may exhibit stem rot and decay. In the mature stage, the disease primarily affects the leaves, causing necrotic spots and chlorosis. Under conditions of high humidity, black mold can be observed in the affected areas. Small pieces of symptomatic leaves from six different infected plants were collected and surface-sterilized with 5% NaClO for 3 min and 75% alcohol for 30 s for pathogen isolation (Wang et al., 2020). After rinsing with sterile water and blotted on sterile filter paper, the tissues were established on potato dextrose agar (PDA) media and incubated at 28℃ for 3-4 days. Pure isolates showed up at PDA were obtained through single-spore isolation. Colonies of all 16 isolates obtained by single-spore isolation had similar morphological characteristics on the PDA medium, the mycelium of the isolate appears dense and yellowish-brown on the PDA medium, and also secretes a brownish-red pigment on PDA. Under the opticalmicroscope, the perithecia from PDA media are subglobose spherical in shape, 80-100 μm in diameter, brownish by reflected light, wholly and densely hairy. Terminal hairs are very dense, greyish by reflected light, olive brown to reddish brown by transmitted light, thick-walled, arcuate, circinate, or spirally coiled at the apex. The ascospores within the perithecia are elliptical or droplet-shaped, initially colorless hyaline but later becoming subhyaline slightly gray, with dimensions of 7-9 μm × 4-5 μm. The morphological characteristics of the isolates were consistent with the description of Arcopilus aureus (Wang et.al. 2016). The internal transcribed spacer (ITS) region and β-tubulin genes of three randomly selected isolates were PCR amplified and sequenced using primers ITS4/ITS5 and Bt2a/Bt2b. The sequences of ITS and β-tubulin genes were submitted to NCBI with GenBank Accession No. OR539527 and OR640972, respectively. Based on morphological features and phylogenetic analysis, we concluded that the isolates belonged to A. aureus. Pathogenicity tests were conducted by placing agar plugs-containing fungal mycelia and agar blocks (control) on leaves of Hami melon seedlings (n=12) grown at 28°C with 60% humidity in a greenhouse, the assay was repeated three times. Symptoms appeared on the pathogen-inoculated leaves seven days after inoculation, whereas the control treatment remained symptomless. The pathogens were reisolated from diseased leaves and identified as A. aureus based on morphological, and molecular phylogenetic analysis, while Koch'sostulate was used to confirm its life mode. To the best of our knowledge, this is the first report of leaf spot caused by A. aureus on Cucumis melo L. in China.
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Affiliation(s)
| | - Wenhui Zhang
- Linyi University, 165082, Linyi, Shandong, China
- Philippine Christian University Center for International Education, Malate, Philippines;
| | - Jinchang Liang
- Chinese Academy of Agricultural Sciences Institute of Tobacco Research, 243822, Qingdao, Shandong, China;
| | - Lizheng Cui
- Chinese Academy of Agricultural Sciences Institute of Tobacco Research, 243822, Qingdao, Shandong, China;
| | - Zhenzhen Cui
- Chinese Academy of Agricultural Sciences Institute of Tobacco Research, 243822, Qingdao, Shandong, China;
| | - Wenjing Wang
- Chinese Academy of Agricultural Sciences Institute of Tobacco Research, 243822, Qingdao, Shandong, China;
| | - De-Jie Cheng
- Guangxi University, 12664, Plant Protection, Agricultural College of Guangxi University, Nanning City, Guangxi Province, China, Nanning, China, 530005;
| | - Xiaoqiang Wang
- plant protection, keyuan jing forth road, laoshan district, qingdao, shandong, China, 276000;
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Cosseboom SD, Hu M. Utilizing disease prediction models to time fungicide applications for controlling ripe rot, caused by Colletotrichum spp., in Maryland vineyards. Plant Dis 2023. [PMID: 38105460 DOI: 10.1094/pdis-10-23-2114-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Two previously published ripe rot prediction models, DF2-NN and GH2-DT, were evaluated for fungicide application timing efficacy in Maryland vineyards. Both models utilize leaf wetness duration (LWD), temperature, and grape cluster phenological stages as model parameters. These three parameters were tracked throughout the 2021 to 2023 seasons in three vineyards. The fungicide efficacy trials started at the veraison phenological stage and included a non-treated control, a 12-day interval treatment, and two model-triggered treatments, when risk predicted by the models crossed a threshold. The severity of ripe rot on the clusters in each treatment was assessed when the fruit were mature. Ripe rot severity in the non-treated controls was higher during seasons with more LWD and more precipitation. Days in which the models were triggered by the environmental conditions primarily coincided with precipitation events and lengthy LWDs. The model-triggered treatments never had significantly higher ripe rot severity than the 12-day interval treatment but had significantly lower severities than the non-treated control in most trials which had high ripe rot pressure. Furthermore, the model-triggered treatments resulted in fewer fungicide applications than the 12-day interval treatment on average. The DF2-NN model appeared to be more accurate and useful for ripe rot prediction and treatment than the GH2-DT model because it triggered fewer fungicide applications while reducing ripe rot. This model may be useful for improving or maintaining ripe rot control with less fungicide inputs, which may be beneficial for the environment and the reduction of fungicide resistance selection.
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Affiliation(s)
- Scott David Cosseboom
- University of Maryland, Plant Science and Landscape Architecture, 4291 Fieldhouse Drive, Rm 2106, College Park, College Park, Maryland, United States, 20742
- California, United States;
| | - Mengjun Hu
- University of Maryland at College Park, 1068, Department of Plant Science and Landscape Architecture, 4291 Fieldhouse Drive, College Park, Maryland, United States, 20742-5031;
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Yan H, Mi Y, Li Y, Zang H, Guo L, Huo J, Man Z, Chen Z, Zhang B, Sang M, Li C, Cheng Y. First Report of Postharvest Fruit Rot Caused by Botrytis cinerea on Blue Honeysuckle ( Lonicera caerulea L.) Fruit in China. Plant Dis 2023. [PMID: 37990520 DOI: 10.1094/pdis-08-23-1673-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2023]
Abstract
Blue honeysuckle (Lonicera caerulea L.) fruit is growing in popularity as a natural, functional 'super fruit', but its storage is challenged by pathogen infection. In June 2022, approximately 30% of 100 kg of blue honeysuckle fruits (cv. Lanjingling) obtained in Harbin, China (128.70°E, 44.87°N) showed postharvest fruit rot symptoms after 15 d of storage at 4°C, leading to whole fruit rotting with gray fungal growth (Fig.1 A). Small (1-2 mm) segments of infected tissue were obtained from 20 randomly selected fruits which were surface sterilized with 75% ethanol for 30 s and 5% sodium hypochlorite (NaOCl) for 3 min, rinsed three times with sterile distilled water, dried in paper towel, and plated in 9 cm Petri dishes containing potato dextrose agar (PDA). Five purified cultures were obtained and their front colonies were dark brown (Fig.1 C) on the PDA plates after 5 d at 25°C (Alam et al. 2019; Riquelme-Toledo et al. 2020). The conidia (n = 50) were single-celled, hyaline, either ellipsoid or ovoid, and measured 7.5-15.0 μm (11.7 μm average) × 6.0-11.4 μm (8.3 μm average). The conidiophores (Fig.1 E) were branched at the apex bearing bunches of conidia resembling grape clusters (Ellis 1971). For molecular confirmation, genomic DNA was extracted from a representative isolate LDGS-3 using the Ezup Column Fungi Genomic DNA Purification kit (Sangon Biotech, Shanghai, China). The internal transcribed spacer region (ITS, GenBank ON952502), heat shock protein (HSP60, GenBank OP039103), the second-largest subunit of RNA polymerase II (RPB2, GenBank OP186114) and glyceraldehyde 3-phosphate dehydrogenase (G3PDH, GenBank OQ658508) genes were partially amplified with the respective primers ITS1/ITS4, HSP60f/HSP60r, RPB2f/RPB2r, and G3PDH-F/G3PDH-R (Staats et al. 2005; White et al. 1990). BLAST analysis revealed that the sequences of the four genes showed 100% homology with the MH782039, MH796663, MN448501 and MH796662 sequences for isolates of Botrytis cinerea. Based on morphology and molecular characteristics, the isolate LDGS-3 was identified as B. cinerea. For pathogenicity, twenty healthy blue honeysuckle fruits (cv. Lanjingling) were superficially sterilized with 75% ethanol and washed with distilled water. Ten inoculated blue honeysuckle fruits, which were injected with 10 μL conidial suspension of isolate LDGS-3 (106 spores/mL) displayed fruit rot symptoms (Fig.1 B) inside 9 cm Petri dishes after 10 d at 4°C, while no symptoms were detected on ten fruits inoculated with sterile distilled water (Alam et al. 2019). The same isolate that was reisolated from infected fruits with the same morphological and molecular traits was also identified as B. cinerea, confirming Koch's postulates. B. cinerea was previously reported in Henan Province, China in hawthorn (Zhang et al. 2018). To our knowledge, this is the first report of postharvest fruit rot caused by B. cinerea on blue honeysuckle fruit in China, which will aid future management of this emerging postharvest disease.
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Affiliation(s)
- Haohao Yan
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yaozu Mi
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yuxuan Li
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Hailian Zang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | | | | | - Zijian Man
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Zexu Chen
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Bing Zhang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Mingyu Sang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Chunyan Li
- Northeast Agricultural UniversityHarbin, Heilongjiang, China, 150030;
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Jevremović D, Mavrič Pleško I. Editorial: New insights in small fruit diseases. Front Plant Sci 2023; 14:1306301. [PMID: 38023924 PMCID: PMC10663271 DOI: 10.3389/fpls.2023.1306301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Accepted: 10/30/2023] [Indexed: 12/01/2023]
Affiliation(s)
- Darko Jevremović
- Department for Fruit Protection and Certification of Planting Material, Fruit Research Institute, Čačak, Serbia
| | - Irena Mavrič Pleško
- Plant Protection Department, Agricultural Institute of Slovenia, Ljubljana, Slovenia
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Saito S, Wang F, Xiao CL. Sensitivity of Mucor piriformis to Natamycin and Efficacy of Natamycin Alone and with Salt and Heat Treatments Against Mucor Rot of Stored Mandarin Fruit. Plant Dis 2023; 107:3602-3607. [PMID: 37272052 DOI: 10.1094/pdis-04-23-0796-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Mucor rot caused by Mucor piriformis is an emerging postharvest disease of mandarin fruit in California. Natamycin is a newly registered biofungicide for postharvest use on citrus and some other fruits. In the study, baseline sensitivity to natamycin in 50 isolates of M. piriformis was determined in vitro. The mean EC50 (effective concentration to inhibit sporangiospore germination by 50%) and MIC (minimum inhibitory concentration to inhibit mycelial growth by 100%) values were 0.59 μg/ml and less than 1.0 μg/ml, respectively. Natamycin at the label rate of 920 μg/ml alone or in combination with 3% potassium sorbate (PS) or 3% sodium carbonate (SC) applied at 20 or 50°C was evaluated for control of Mucor rot on inoculated 'Tango' mandarin fruit. Natamycin alone reduced Mucor rot incidence on stored mandarin fruit from 100% among nontreated control fruit to approximately 30%, a reduction of more than 70% compared to the nontreated control, while 3% PS and 3% SC had no to little control. When applied at 50°C, natamycin and 3% PS reduced Mucor rot incidence by 65.0 and 31.2%, respectively; while natamycin in combination with 3% PS reduced disease incidence by 92.5% compared to the nontreated control after 2 weeks of storage at 5°C. This combined treatment remained effective even when the application of the treatment was delayed for 6 and 12 h after inoculation. However, the effectiveness of the treatments declined when storage was extended to 3 or 4 weeks. Natamycin can be an effective tool to control Mucor rot on mandarin fruit, and minimizing the period of extended storage could help maintain the control efficacy of natamycin.
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Affiliation(s)
- S Saito
- United States Department of Agriculture - Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA 93648
| | - F Wang
- United States Department of Agriculture - Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA 93648
| | - C L Xiao
- United States Department of Agriculture - Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA 93648
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Song Z, Fang Q, Gao SG, Zeng R, Gao P, Xu L, Dai F. First Report of Bacterial Leaf Spot on Muskmelon Caused by Pseudomonas syringae pv. syringae in China. Plant Dis 2023. [PMID: 37755412 DOI: 10.1094/pdis-06-23-1201-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 09/28/2023]
Abstract
Muskmelon (Cucumis melo L.) is one of the most widely cultivated and economically important fruit crops in the world. In January 2023, muskmelon leaves of cultivar 'Sheng Gu' were observed with irregularly shaped spots in four nurseries in Wanxiang Village, Pudong District of Shanghai, China. Initial symptoms were irregular soaking on the leaves, which progressed to rotting and necrotic spots. The disease incidence of melon seedlings in different nurseries ranged from 10 to 25%. To isolate and identify the causal agent, the small pieces of lesion tissues (5×5 mm) from symptomatic leaves were sterilized in 75% ethanol for 30 s and rinsed three times with sterile water. Following that, tissues were crushed with sterile glass rod in a sterile 2.0 mL centrifuge tube containing 100 μl of sterile water. The suspension was serially diluted before being spread on Luria-Bertani (LB) medium. After 48 h of incubation at 28°C, the cream-colored bacterial colonies from the 10-4 dilution were tiny and purified by streaking on new LB plates. To confirm the species identity of the bacterial isolates, genomic DNA was extracted from four independent representative colonies from different diseased plants, and several conserved genes were amplified and sequenced, including the 16S rRNA gene with primers 27F/1492R, gyrB gene with primers gyrBFor2/gyrBRev2, and rpoD gene with primers rpoDFor2/rpoDRev2 (Lelliot et al. 1966; Murillo et al. 2011). The results showed that the four colonies were identical. Using BLAST analysis in GenBank, the 16S rDNA (accession no. OQ659765, 1,402 bp), the gyrB (accession no. OQ708618, 911 bp), and rpoD sequences (accession no. OQ708619, 798 bp) showed 99.86-100% homology with 99-100% coveage as the corresponding gene sequences in the P. syringae pv. syringae strain HS191 (accession no. CP006256.1). The bacterial isolate was designated as P. syringae pv. syringae strain PDTG. Phylogenetic tree analysis of 16S rDNA, gyrB and rpoD genes further verified that the bacteria isolate was in close proximity to P. syringae pv. syringae. Additionally, all four isolates were detected in PCR with P. syringae pv. syringae specific primers, PsyF/ PsyR (Borschinger et al. 2016; Guilbaud et al. 2016). Ten two weeks old healthy 'Sheng Gu' muskmelon seedlings were inoculated by spraying with a bacterial suspension of 108 CFU/ml, and ten additional healthy plants treated with sterilized water served as the control. The inoculated plants were maintained at 25°C and 75% relative humidity for 7 days in artificial climate room. Water-soaked rot, similar as those seen in the nurseries, appeared on leaves 7 days after inoculation (dai), while the leaves of control plants remained healthy. The bacteria were re-isolated from rot of inoculated leaves and confirmed as the original pathogen by PCR with the PsyF/ PsyR primers and the 16S rRNA gene sequences. To our knowledge, this is the first report of P. syringae pv. syringae causing bacterial leaf spot on muskmelon in China, and this report expands the host range of P. syringae pv. syringae.
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Affiliation(s)
- Zhiwei Song
- Shanghai Academy of Agricultural Sciences, 74594, Eco-Environmental Protection Research Institute, Jinqi 1000, Shanghai, China, 201403;
| | | | - Shi-Gang Gao
- Shanghai Academy of Agricultural Sciences, 74594, 1000 Jinqi Road, Shanghai, China, 201106;
| | - Rong Zeng
- plant pathology, Institute of Plant Protection,Shanghai Academy of Agricultural Sciences , 2901# Beidi Road, Shanghai, Shanghai, ShangHai, China, 201106;
| | - Ping Gao
- Shanghai Academy of Agricultural Sciences, 74594, No. 1000 Jinqi Road, Shanghai, China, 201403;
| | | | - Fuming Dai
- Shanghai Academy of Agricultural Sciences, Institute of Plant Protection, 1000 Jinqi Road, Fengxian District, Shanghai, China, 201403;
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12
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Hu S, Yan C, Yu H, Zhang Y, Zhang CQ. Establishment of the Recombinase Polymerase Amplification-Lateral Flow Dipstick Detection Technique for Fusarium oxysporum. Plant Dis 2023; 107:2665-2672. [PMID: 36774580 DOI: 10.1094/pdis-12-22-2841-re] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Fusarium oxysporum causes crown rot, wilt, root rot, and many other major plant diseases worldwide. During the progression of strawberry crown rot disease, the pathogen is transmitted from the mother plant to the seedling through the stolon, with obvious characteristics of latent infection. Therefore, rapid and timely detection of F. oxysporum is important for efficient disease management. In this study, a recombinase polymerase amplification-lateral flow dipstick (RPA-LFD) detection technique was developed for the rapid detection of F. oxysporum on strawberry plants by targeting the CYP51C gene, which is unique to Fusarium spp. Because this RPA-LFD detection technique was highly specific to F. oxysporum, other Fusarium and non-Fusarium fungi were not detected. The optimal reaction temperature and time for this technique were 39°C and 8 min, respectively. The detection limit was 1 pg of F. oxysporum genomic DNA in a 50-μl reaction system. A total of 46 strawberry plants with or without crown rot symptoms collected from Jiande, Changxing, and Haining in Zhejiang Province were further assessed for F. oxysporum infection using both RPA-LFD and traditional tissue isolation techniques. The RPA-LFD test showed that 32 of the 46 strawberry plants tested were positive for F. oxysporum, while in the traditional isolation technique, F. oxysporum was isolated from 30 of the 46 strawberry plants. These results suggest that our established RPA-LFD method is rapid, sensitive, and highly specific in detecting F. oxysporum infection in strawberry plants.
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Affiliation(s)
- Shuodan Hu
- Department of Plant Pathology, Zhejiang Agriculture and Forest University, Hangzhou 311300, China
| | - Chenyi Yan
- Department of Plant Pathology, Zhejiang Agriculture and Forest University, Hangzhou 311300, China
| | - Hong Yu
- Research Institute for the Agriculture Science of Hangzhou, Hangzhou 310013, China
| | - Yu Zhang
- Department of Plant Pathology, Zhejiang Agriculture and Forest University, Hangzhou 311300, China
| | - Chuan-Qing Zhang
- Department of Plant Pathology, Zhejiang Agriculture and Forest University, Hangzhou 311300, China
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Rahman M, Islam T, Jett L, Kotcon J. Probiotic Bacteria, Anaerobic Soil Disinfestation, and Mustard Cover Crop Biofumigation Suppress Soilborne Disease and Increase Yield of Strawberry in a Perennial Organic Production System. Plant Dis 2023; 107:2490-2499. [PMID: 36750719 DOI: 10.1094/pdis-10-22-2402-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Black root rot complex and crown rot of strawberry caused by soilborne fungi limit sustainable strawberry production in the northeastern United States, especially in perennial systems, including matted row and plasticulture. As pathogen populations build up over time in the rhizosphere and infect the root system, feeder roots are pruned, which diminishes nutrient and water uptake and causes stunted plant growth or death. Alternative management options are needed for many organic and small growers who can't use chemical fumigants due to new regulations and potential health hazards. Strawberry plug plants were grown on beneficial microbe-inoculated or uninoculated planting mix followed by transplanting in fruiting field plots that either was biofumigated with mustard cover crop (MCC), anaerobically disinfested (ASD), or left untreated. Different combinations of plug plants and field plot treatments were used to determine the efficacy of individual treatments or synergistic effects from combination treatment. Plug plants were transplanted in pretreated plastic mulched raised beds and grown following a typical organically recommended production system. Plants grown on TerraGrow (TG)-inoculated planting mix showed enhanced plant vigor in the fruiting field compared with untreated plants. Weeds that grew through planting holes were significantly (P ≤ 0.045) suppressed in ASD plots compared with untreated plots in the first year. Plants treated with a combination treatment of TG and ASD had significantly higher fruit yield in both years (2019 and 2020), although the difference was greater in the second year. Plant vigor and survival in treated plots except MCC were also significantly higher in the second year compared with the untreated control. Suppression of pathogenic microbes and plant vigor improvement in treated plots appear to be the factors providing beneficial effects and higher net economic return. Taken together, our results suggest that a combination of beneficial microbes and ASD could be an alternative to synthetic fumigation in a perennial strawberry production system.
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Affiliation(s)
| | - Tofazzal Islam
- Fulbright Visiting Scholar, Davis College of Agriculture Natural Resources and Design, West Virginia University, Morgantown, WV 26506
| | - Lewis Jett
- WVU Extension Service, Morgantown, WV 26506
| | - James Kotcon
- Division of Plant and Soil Sciences, West Virginia University, Morgantown, WV 26506
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Yan H, Mi Y, Li Y, Lv P, Chen Z, Zhang B, Yang J, Sang M, Zhou Y, Yang H, Zang H, Li C. First report of Didymella glomerata causing leaf spot on Lonicera caerulea L. in Heilongjiang province, China. Plant Dis 2023. [PMID: 37526487 DOI: 10.1094/pdis-05-23-0995-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 08/02/2023]
Abstract
China has the largest blue honeysuckle (Lonicera caerulea L.) cultivation area globally. In June 2022, leaf spots were observed on approximately 10% of blue honeysuckle (cv. 'Lanjingling') leaves in a 0.03-ha field in Harbin (127.66°E, 45.61°N), Heilongjiang Province, China. The leaves of the affected plants displayed chlorotic to tan dieback with a darker brown margin along the leaftip and leave margins. Cross-sectional segments of approximately 3 mm were cut from 50 typical infected plant leaves. Their surfaces were sterilized with 75% ethanol for 30 s followed by 3 min in 5% sodium hypochlorite (NaOCl), rinsed three times with sterile water, and transferred to 9-cm Petri dishes containing 15 ml of sterile PDA growth medium. Five purified cultures with similar culture characteristics were finally obtained and their colonies were dark brown on the PDA plates. The pycnidia were subglobular and deep black and measured avg. 215.48 (135.30-331.20) μm × avg. 170.28 (99.90-282.90) μm (n = 50) (Chen et al., 2015; Huang et al., 2018). Conidia were single-celled, hyaline, and ellipsoidal and measured avg. 6.22 (5.40-7.20) µm × avg. 3.42 (2.70-3.90) µm (n = 50). For molecular verification, genomic DNA was extracted from a representative isolate, LD-75. The internal transcribed spacer region (ITS), the second-largest subunit of RNA polymerase II (rpb2), the partial 28S large subunit rDNA (LSU), beta-tubulin (TUB), and actin (ACT) genes were amplified with the primers ITS1/ITS4, RPB2f/RPB2r, LROR/LR7, TUB2Fd/TUB4Rd, and ACT512f/ACT783R, respectively (White et al. 1990; Carbone and Kohn, 1999; Staats et al., 2005; de Gruyter et al., 2009; Chen et al., 2015). BLAST results indicated that the genes of LD-75 (GenBank OP218870, OP264863, OQ561448, OQ597233, and OQ597232) shared 99%-100% identity with those of Didymella glomerata (OK485138, GU371781, EU754185, MZ073910, and MW963190, respectively). Therefore, based on morphological characteristics and molecular phylogeny, LD-75 was identified as D. glomerata. Six two-year-old healthy plants from the 'Lanjingling' cultivar were selected for a pathogenicity test. The leaves were surface disinfested with 75% ethanol and then wiped with sterilized water three times. All plants were cultured in a greenhouse at 28℃ under a 12-h light/dark cycle. Whole plants sprayed with conidial suspension of isolate LD-75 (106 spores/mL) (n = 3) displayed leaf spot symptoms after 14 d, while no symptoms were detected on whole plants sprayed with sterile water (n = 3). The same isolate, reisolated from infected leaves and with the same morphological and molecular traits, was also identified as D. glomerata, confirming Koch's postulate. The fungus was previously reported in Cornus officinalis in Nanyang City, China (Huang et al., 2018). To our knowledge, this is the first report of blue honeysuckle leaf spot caused by D. glomerata in China. Reducing blue honeysuckle production losses caused by leaf spots is crucial for growers, and we hope that researchers will develop efficient control strategies for managing this emerging plant disease.
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Affiliation(s)
- Haohao Yan
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yaozu Mi
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yuxuan Li
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Pin Lv
- Heilongjiang Academy of SciencesHarbin, China, 150040;
| | - Zexu Chen
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Bing Zhang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Jie Yang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Mingyu Sang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yang Zhou
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Hua Yang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Hailian Zang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Chunyan Li
- Northeast Agricultural UniversityHarbin, Heilongjiang, China, 150030;
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Yan H, Mi Y, Man Z, Zang H, Guo L, Huo J, Li Y, Chen Z, Zhang B, Sang M, Li C, Cheng Y. First report of leaf spot disease caused by Alternaria tenuissima on Lonicera caerulea L. in Heilongjiang Province, China. Plant Dis 2023. [PMID: 37436211 DOI: 10.1094/pdis-04-23-0794-pdn] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 07/13/2023]
Abstract
Blue honeysuckle (Lonicera caerulea L.) is a perennial plant of the Caprifoliaceae family and Lonicera genus, the largest genus in the plant kingdom. Between September 2021 and September 2022, a leaf spot disease was observed on ~20% of blue honeysuckles of the 'Lanjingling' cultivar grown in a 3.33 ha field at the Xiangyang base (126.96°E, 45.77°N) of the Northeast Agricultural University, Harbin (Heilongjiang Province, China). Leaf spots first presented black mildew centers, gradually covering large areas of the leaf until it eventually fell off. Small 3-4 mm segments of infected tissue from 50 randomly selected leaves were surface sterilized with 75% ethanol and 5% sodium hypochlorite, rinsed in sterile distilled water, and transferred to 9 cm Petri dishes containing potato dextrose agar (PDA) after drying. Finally, two isolated pathogens were obtained through single spore culture on PDA; they appeared as gray-black colonies and were named LD-12 and LD-121. The observed LD-12 and LD-121 conidia displayed a morphology consistent with Alternaria spp. They were obpyriform and dark brown, with 0-6 transverse and 0-3 longitudinal septa, measuring 6.00-17.70 μm × 9.30-42.30 μm and 5.70-20.70 μm × 8.40-47.70 μm for LD-12 and LD-121, respectively (n = 50). Genomic DNA was extracted from the two isolates for molecular verification, and PCR amplification was performed with ITS1/ITS4 (White et al. 1990), GPD1/GPD2 (Woudenberg et al. 2015), EFl-728F/EF1-986R (Carbone and Kohn 1999), RPB2-5F2/RPB2-7CR (Liu et al. 1999), and Alt-for/Alt-rev (Hong et al. 2005) primers. Sequences of LD-12 ITS (OQ607743), GPD (OQ623200), TEF (OQ623201), RPB2 (OQ658509), and ALT (OQ623199) revealed 99-100% of identity with Alternaria tenuissima sequences (KC584567, MK451973, LT707524, MK391051, and ON357632). Sequences of LD-121 ITS (OQ629881), GPD (OQ850078), TEF (OQ850075), RPB2 (OQ850076), and ALT (OQ850077) revealed 99-100% identity with A. alternata sequences (MN826219, ON055384, KY094927, MK637444, and OM849255). Nine two-year-old healthy plants from the 'Lanjingling' cultivar were selected for a pathogenicity test. Three plants were inoculated with either the LD-12 or LD-121 conidial suspension (1 × 106 spores/ml) or with clean water as an experimental control condition (Mirzwa-Mróz et al., 2018; Liu et al., 2021). All plants were cultured in a greenhouse at 28℃ under a 12-h light/dark cycle, and each experiment was performed three times. Typical leaf spot symptoms were observed on inoculated leaves after 10 d. The same pathogens reisolated from infected leaves displayed the same morphological and molecular traits. They were again identified as A. tenuissima and A. alternata, confirming Koch's postulate. A. tenuissima and A. alternata were previously reported on Orychophragmus violaceus (Liu et al., 2021) and L. caerulea (Yan et al., 2022) in China. This study is the first report of a blue honeysuckle leaf spot caused by A. tenuissima in China. In the future, effective biological and chemical control should be used to prevent blue honeysuckle leaf spots in China.
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Affiliation(s)
- Haohao Yan
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yaozu Mi
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Zijian Man
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Hailian Zang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | | | | | - Yuxuan Li
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Zexu Chen
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Bing Zhang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Mingyu Sang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Chunyan Li
- Northeast Agricultural UniversityHarbin, Heilongjiang, China, 150030;
| | - Yi Cheng
- 600 Changjiang Road, HarbinHarbin, China, 150030;
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Martin KF, Brannen PM, Jagdale GB, Holladay T, Severns PM. Distribution, Diversity, and Soil Associations of Wine Grape Plant-Parasitic Nematodes in Georgia, U.S.A., Vineyards. Plant Dis 2023:PDIS10222354RE. [PMID: 36410019 DOI: 10.1094/pdis-10-22-2354-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Wine grape (Vitis vinifera and V. vinifera hybrids) production in Georgia occurs in three distinct regions (North, West, and South) which can be characterized by sandy, sandy-loam, or sandy clay-loam soils. We studied plant-parasitic nematode (PPN) communities in 15 wine grape vineyards from the three primary growing regions to understand which nematodes are a concern and what soil characteristics are associated with their occurrence and relative abundance. Twelve genera of PPNs were detected throughout the state: Belonolaimus, Helicotylenchus, Hemicycliophora, Heterodera, Hoplolaimus, Meloidogyne, Mesocriconema, Paratrichodorus, Paratylenchus, Pratylenchus, Tylenchorhynchus, and Xiphinema. Nonmetric multidimensional scaling ordination and multirank permutation procedure identified PPN community differences and soil characteristics that were associated by region. Indicator species analysis identified Helicotylenchus, Mesocriconema, Tylenchorhynchus, and Xiphinema as statistically associated with the West while Meloidogyne and Paratrichodorus were associated with the South. Our analyses further suggested that soil texture (percent sand, percent clay, and percent silt) and the lime buffer capacity at equilibrium (LBCEQ) were associated with PPN community structure while pH was not. When focused on a single vineyard in the North, multiple logistic regression analysis suggested a statistically significant association between Meloidogyne spp. and soil characteristics, including percentages of sand, pH, and LBCEQ. Our study supports the association between soil characteristics and specific nematode genera, as well as the emergence of LBCEQ, the soil measurement with the strongest statistical association with nematode community structure and Meloidogyne presence.
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Affiliation(s)
| | - Phillip M Brannen
- Department of Plant Pathology, University of Georgia, Athens, GA 30602
| | - Ganpati B Jagdale
- Department of Plant Pathology, University of Georgia, Athens, GA 30602
| | - Ted Holladay
- Department of Plant Pathology, University of Georgia, Athens, GA 30602
| | - Paul M Severns
- Department of Plant Pathology, University of Georgia, Athens, GA 30602
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Gadoury DM, Sapkota S, Cadle-Davidson L, Underhill A, McCann T, Gold KM, Gambhir N, Combs DB. Effects of Nighttime Applications of Germicidal Ultraviolet Light Upon Powdery Mildew ( Erysiphe necator), Downy Mildew ( Plasmopara viticola), and Sour Rot of Grapevine. Plant Dis 2023:PDIS04220984RE. [PMID: 36281020 DOI: 10.1094/pdis-04-22-0984-re] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Nighttime applications of germicidal ultraviolet were evaluated as a means to suppress three diseases of grapevine. In laboratory studies, UV-C light (peak 254 nm, FWHM 5 nm) applied during darkness strongly inhibited the germination of conidia of Erysiphe necator, and at a dose of 200 J/m2, germination was zero. Reciprocity of irradiance and duration of exposure with respect to conidial germination was confirmed for UV-C doses between 0 and 200 J/m2 applied at 4 or 400 s. When detached grapevine leaves were exposed during darkness to UV-C at 100 J/m2 up to 7 days before they were inoculated with zoospores of Plasmopara viticola, infection and subsequent sporulation was reduced by over 70% compared to untreated control leaves, indicating an indirect suppression of the pathogen exerted through the host. A hemicylindrical array of low-pressure discharge UV-C lamps configured for trellised grapevines was designed and fitted to both a tractor-drawn carriage and a fully autonomous robotic carriage for vineyard applications. In 2019, in a Chardonnay research vineyard with a history of high inoculum and severe disease, weekly nighttime applications of UV-C suppressed E. necator on leaves and fruit at doses of 100 and 200 J/m2. In the same vineyard in 2020, UV-C was applied once or twice weekly at doses of 70, 100, or 200 J/m2, and severity of E. necator on both leaves and fruit was significantly reduced compared to untreated controls; twice-weekly applications at 200 J/m2 provided suppression equivalent to a standard fungicide program. None of the foregoing UV-C treatments significantly reduced the severity of P. viticola on Chardonnay vines compared to the untreated control in 2020. However, twice-weekly applications of UV-C at 200 J/m2 to the more downy mildew-resistant Vitis interspecific hybrid cultivar Vignoles in 2021 significantly suppressed foliar disease severity. In commercial Chardonnay vineyards with histories of excellent disease control in Dresden, NY, E. necator remained at trace levels on foliage and was zero on fruit following weekly nighttime applications of UV-C at 200 J/m2 in 2020 and after weekly or twice-weekly application of UV-C at 100 or 200 J/m2 in 2021. In 2019, weekly nighttime applications of UV-C at 200 J/m2 also significantly reduced the severity of sour rot, a decay syndrome of complex etiology, on fruit of 'Vignoles' but not the severity of bunch rot caused by Botrytis cinerea. A similar level of suppression of sour rot was observed on 'Vignoles' vines treated twice-weekly with UV-C at 200 J/m2 in 2021. Nighttime UV-C applications did not produce detectable indications of metabolic abnormalities, phytotoxicity, growth reduction, or reductions of fruit yield or quality parameters, even at the highest doses and most frequent intervals employed.
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Affiliation(s)
- David M Gadoury
- Plant Pathology and Plant-Microbe Biology Section, Cornell AgriTech, Geneva, NY 14456
| | - Surya Sapkota
- Plant Pathology and Plant-Microbe Biology Section, Cornell AgriTech, Geneva, NY 14456
| | | | - Anna Underhill
- USDA Grape Genetics Research Unit, Cornell AgriTech, Geneva, NY 14456
| | - Tyler McCann
- Plant Pathology and Plant-Microbe Biology Section, Cornell AgriTech, Geneva, NY 14456
| | - Kaitlin M Gold
- Plant Pathology and Plant-Microbe Biology Section, Cornell AgriTech, Geneva, NY 14456
| | - Nikita Gambhir
- Plant Pathology and Plant-Microbe Biology Section, Cornell AgriTech, Geneva, NY 14456
| | - David B Combs
- Plant Pathology and Plant-Microbe Biology Section, Cornell AgriTech, Geneva, NY 14456
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Marin MV, Baggio JS, Melo PP, Peres NA. Phosphite Is More Effective Against Phytophthora Crown Rot and Leather Rot Caused by Phytophthora cactorum than P. nicotianae. Plant Dis 2023:PDIS06221481RE. [PMID: 36415890 DOI: 10.1094/pdis-06-22-1481-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Phytophthora crown rot (PhCR) and leather rot (LR) caused by Phytophthora spp. are major threats to strawberry production worldwide. In the United States, these diseases are mainly caused by Phytophthora cactorum; however, P. nicotianae has also been recently reported causing PhCR. Growers have relied on three different chemical products (i.e., mefenoxam and phosphites for PhCR and LR, and azoxystrobin for LR). Because resistance to mefenoxam and azoxystrobin has been reported, this study aimed to assess the in vitro sensitivity of Phytophthora spp. isolates from strawberry to phosphites and investigate its efficacy on in vivo assays. In vitro sensitivity of P. cactorum (n = 128) and P. nicotianae (n = 24) isolates collected from 1997 to 2018 was assessed for phosphite at 10, 50, 100, 150, and 300 µg/ml. Regardless of the Phytophthora sp. and isolation organ, most of the isolates (75% for P. cactorum and 54.2% for P. nicotianae) had effective concentration that inhibits pathogen growth by 50% (EC50) values ranging from 50 to 100 µg/ml. In vivo tests with strawberry fruit and plants revealed that commercial formulations of phosphite applied at the highest field rate controlled P. cactorum isolates but failed to control PhCR and LR caused by some isolates of P. nicotianae. In this study, EC50 results from in vitro assay did not truly translate the efficacy of phosphites on controlling LR and PhCR caused by P. cactorum and P. nicotianae. Our findings support the hypothesis that the product acts in a dual way: direct on the pathogen and stimulating the plant immune system. Moreover, this has important implications for disease management, highlighting the importance of a correct diagnosis before phosphite recommendations, because its efficacy varies within Phytophthora spp.
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Affiliation(s)
- Marcus V Marin
- Department of Plant Pathology, Gulf Coast Research and Education Center, University of Florida, Wimauma, FL 33598
| | - Juliana S Baggio
- Department of Plant Pathology, Gulf Coast Research and Education Center, University of Florida, Wimauma, FL 33598
| | - Paulo P Melo
- Department of Plant Pathology, Gulf Coast Research and Education Center, University of Florida, Wimauma, FL 33598
| | - Natalia A Peres
- Department of Plant Pathology, Gulf Coast Research and Education Center, University of Florida, Wimauma, FL 33598
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Donda BP, Kesoju SR, Arnold K, McRoberts N, Naidu RA. Spatio-Temporal Spread of Grapevine Leafroll Disease in Washington State Vineyards. Plant Dis 2023:PDIS04220939RE. [PMID: 36269587 DOI: 10.1094/pdis-04-22-0939-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
The spread of grapevine leafroll disease (GLD) to vineyards planted with certified planting stock is of significant concern to grape growers. In this study, the spatial and temporal spread of GLD was examined in three vineyard blocks planted with virus-tested wine grape (Vitis vinifera) cultivars adjacent to vineyard blocks heavily infected with GLD in two geographic locations in eastern Washington State. During each season, the position of vines showing GLD symptoms was recorded in a matrix representing the planting lattice. Symptomatic vines were positive only for Grapevine leafroll-associated virus 3 (GLRaV-3), the most common virus species consistently associated with GLD in Washington vineyards. The results from multiple seasons showed a gradual increase in disease incidence over time in all three blocks. Spatial and temporal mapping of GLD indicated a disease gradient in which the highest percentage of symptomatic vines was in rows proximal to infected old blocks. Spatial autocorrelation analysis using Moran's I values suggested random patterns of symptomatic vines in the three blocks during initial years, indicating primary spread of the virus not related to infected vines within the block. Clustering at the scale of neighboring vines during subsequent years suggested secondary spread within the block. Results of quadrat-based spatial analyses of GLD incidence were compared with previously reported data obtained from California and elsewhere for an improved understanding of the dynamics of GLD spread to facilitate area-wide disease management strategies.
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Affiliation(s)
- Bhanu Priya Donda
- Department of Plant Pathology, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350
| | - Sandya R Kesoju
- Department of Agriculture, Columbia Basin College, Pasco, WA 99301
| | - Kari Arnold
- Department of Plant Pathology, University of California, Davis, CA 95616
| | - Neil McRoberts
- Department of Plant Pathology, University of California, Davis, CA 95616
| | - Rayapati A Naidu
- Department of Plant Pathology, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350
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20
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Pugliese M, Gilardi G, Guarnaccia V, Garibaldi A, Gullino ML. First Report of Gnomoniopsis fragrariae causing leaf spots on strawberry in Italy. Plant Dis 2023. [PMID: 37157115 DOI: 10.1094/pdis-02-23-0232-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Strawberry (Fragaria × ananassa Duch.) is widely cultivated in Italy. During May-June 2022, mild symptoms of an unknown leaf spot disease appeared on 5-10% of June-bearing strawberry (cv. Elodì) plants transplanted in July 2021 in a commercial farm located in the province of Cuneo, North Italy. During September-November 2022, the symptoms appeared also on 10-15% of the plants transplanted in July 2022. The disease was scattered throughout the field, large 600 m2, both on new and senescent leaves. Fungicides (sulphur, Tiovit Jet; penconazole, Topas 10 EC) were applied to the plants according to integrated pest management during the growing period. The disease symptoms were purplish to brown necrotic leaf spots up to 1-3 mm in diameter and chlorotic leaf margins. Black lesions were occasionally observed on the petioles, appearing as small necrotic or larger elongated lesions causing leaf death. Peritechia were observed in planta after about 4 months from sampling and measured (144 to 239 μm and 200 to 291 μm, n = 10). Diseased leaves and petioles from about 10 plants were surface disinfested for 1 min in 1% NaClO, rinsed with sterile water and plated on potato dextrose agar (PDA) amended with 25 mg streptomycin sulphate/liter. A fungus with white cottony colonies was repeatedly recovered and maintained in pure culture on PDA. Biguttulate conidia with rounded ends were measured (4.3 to 8.0 μm and 1.2 to 2.9 μm, average 6.1× 2.3 μm, n = 50) from 21-day old colonies grown in PDA at 22°C and 12 h photoperiod. According to colony and conidia morphology, the isolate was identified as Gnomoniopsis sp. (Walker et al., 2010). The fungal DNA was extracted from a pure culture of one isolate selected as a representative (code FR2-22), by using the E.Z.N.A. Fungal DNA Mini Kit (Omega Bio-Tek, Darmstadt, Germany). The identification was carried out by amplifying and sequencing the internal transcribed spacer (ITS) region and the partial translation elongation factor 1-α (TEF) gene using the primers ITS1/ITS4 and EF-728F/EF2 (Udayanga et al., 2021), respectively. The purified PCR products were sequenced at the BMR Genomics Centre (Padova, Italy) obtaining 551bp (ITS) and 652bp (TEF) sequences deposited in GenBank (Accession nos. OQ179950 and OQ190173, respectively). A BLASTn search of both sequences revealed to be 100% identical to the ITS and TEF loci of Gnomoniopsis fructicola sequences of the isolates VPRI_15547 and CBS 275.51 deposited in GenBank with accession Nos. MT378345 and MT383092. The pathogenicity of the isolate FR2-22 was assessed in two trials by biological tests (3 replicates with 1 plant per replicate/pot) in two greenhouse compartments, kept at temperature 20-24°C and at humidity 80-90%. Healthy leaves of forty-day-old strawberry plants (cv. Elodì) were sprayed with 1-5 x106 conidia/ml obtained from the FR2-22 isolate grown on PDA at 25°C for 20 days. The control (water-sprayed plants) was kept in the same conditions. Small leaf spots similar to the symptoms previously observed in the farm were observed 15 days post inoculation. Furthermore, 30 to 40% of leaves developed symptoms similar to those observed in the field after 25-40 days, while the control remained health. The same fungal isolate was repeatedly reisolated from the affected leaves and petioles and identified based on TEF sequencing. Gnomoniopsis fragariae comb. nov., designed as new name for Gnomoniopsis fructicola (Udayanga et al., 2021), has previously been reported on Fragaria × ananassa plants in Australia and in the USA (Farr and Rossman, 2023). To the best of our knowledge, this is the first report of G. fragariae on strawberry in Italy. The impact of the disease caused by this pathogen could be of high importance in the future of strawberry production in Italy. Healthy propagation material and strict disease management practices in nurseries is a requirement to avoid disease epidemics.
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Affiliation(s)
- Massimo Pugliese
- Università degli Studi di Torino, 9314, Agroinnova, Grugliasco, Piemonte, Italy
- Università degli Studi di Torino, 9314, DiSAFA, Grugliasco, Piemonte, Italy;
| | | | - Vladimiro Guarnaccia
- Università degli Studi di Torino, 9314, Agroinnova, Grugliasco, Piemonte, Italy
- Università degli Studi di Torino, 9314, DiSAFA, Grugliasco, Piemonte, Italy;
| | - Angelo Garibaldi
- Università degli Studi di Torino, 9314, Agroinnova, Grugliasco, Piemonte, Italy;
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Dilla-Ermita CJ, Goldman PH, Jaime JH, Ramos G, Pennerman KK, Henry PM. First report of Fusarium oxysporum f. sp. fragariae race 2 causing Fusarium wilt of strawberry ( Fragaria × ananassa) in California. Plant Dis 2023. [PMID: 37134247 DOI: 10.1094/pdis-02-23-0217-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
In California, Fusarium wilt of strawberry is widespread and causes significant yield losses. Resistant cultivars with the FW1 gene were protected against Fusarium wilt because all strains of Fusarium oxysporum f. sp. fragariae (Fof) in California were race 1 (i.e., avirulent to FW1-resistant cultivars) (Henry et al. 2017; Pincot, et al. 2018; Henry et al. 2021). In the fall of 2022, severe wilt disease was observed in an organic, summer-planted strawberry field in Oxnard, California. Fusarium wilt symptoms were common and included wilted foliage, deformed and highly chlorotic leaflets, and crown discoloration. The field was planted with Portola, a cultivar with the FW1 gene that is resistant to Fof race 1 (Pincot et al. 2018; Henry et al. 2021). Two samples, each consisting of four plants, were collected from two different locations within the field. Crown extracts from each sample were tested for Fof, Macrophomina phaseolina, Verticillium dahliae, and Phytophthora spp. by recombinase polymerase amplification (RPA) (Steele et al. 2022). Petioles were surface sterilized in 1% sodium hypochlorite for 2 minutes and plated on Komada's medium to select for Fusarium spp. (Henry et al. 2021; Komada, 1975). The RPA results were positive for M. phaseolina in one sample and negative for all four pathogens in the other sample. Salmon-colored, fluffy mycelia grew profusely from petioles of both samples. Colony morphology and non-septate, ellipsoidal microconidia (6.0-13 μm × 2.8-4.0 μm) borne on monophialides resembled F. oxysporum. Single hyphal tip isolation of fourteen cultures (P1-P14) was done to purify single genotypes. None of these pure cultures amplified with Fof-specific qPCR (Burkhardt et al. 2019), confirming the negative result obtained with RPA. Translation elongation factor 1-alpha (EF1α) was amplified using EF1/EF2 primers (O'Donnell et al. 1998) from three isolates. Amplicons were sequenced (GenBank OQ183721) and found through BLAST search to have 100% identity with an isolate of Fusarium oxysporum f. sp. melongenae (GenBank FJ985297). There was at least one nucleotide difference when compared to all known strains of Fof race 1 (Henry et al. 2021). Five isolates (P2, P3, P6, P12, and P13) and an Fof race 1 control isolate (GL1315) were tested for pathogenicity on Fronteras (FW1) and Monterey (fw1; susceptible to race 1). Five plants per isolate × cultivar combination were inoculated by dipping roots in 5 × 106 conidia per mL of 0.1% water agar, or in sterile 0.1% water agar for the negative control, and grown as described by Jenner and Henry (2022). After six weeks, all non-inoculated control plants remained healthy while plants of both cultivars inoculated with the five isolates were severely wilted. Petiole assays yielded colonies identical in appearance to the inoculated isolates. For Fof race 1-inoculated plants, wilt symptoms were observed in Monterey but not in Fronteras. This experiment was repeated with P2, P3, P12, and P13 on another FW1 cultivar, San Andreas, and the same results were observed. To our knowledge, this is the first report of F. oxysporum f. sp. fragariae race 2 in California. Losses to Fusarium wilt are likely to increase until genetic resistance to this strain of Fof race 2 is deployed in commercially viable cultivars.
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Affiliation(s)
- Christine Jade Dilla-Ermita
- University of California Davis, 8789, Plant Sciences, One Shields Ave, Davis, California, United States, 95616;
| | - Polly H Goldman
- USDA, 1097, Agricultural Research Service, Salinas, California, United States;
| | - Jose H Jaime
- United States Department of Agriculture, Agricultural Research Service, Salinas, California, United States;
| | - Gerardo Ramos
- United States Department of Agriculture, Agricultural Research Service, Salinas, California, United States;
| | - Kayla K Pennerman
- United States Department of Agriculture, Agricultural Research Service, Salinas, California, United States;
| | - Peter Montgomery Henry
- United States Department of Agriculture, Agricultural Research Service, 1636 E. Alisal St., Salinas, California, United States, 93905;
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22
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Franova J, Pribylova J, Zemek R, Tan JL, Hamborg Z, Blystad DR, Lenz O, Koloniuk I. First report of 'Candidatus Phytoplasma rubi' associated with Rubus stunt disease of raspberry and blackberry in the Czech Republic. Plant Dis 2023. [PMID: 37133341 DOI: 10.1094/pdis-03-23-0467-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Raspberries (Rubus idaeus L.), occurring in the temperate zone of the northern hemisphere and blackberries (R. fruticosus L.), cultivated and growing all over the world, are plant species of the family Rosaceae. These species are susceptible to phytoplasma infections, which cause Rubus stunt disease. It spreads uncontrolled by vegetative propagation of plants (Linck and Reineke 2019a) and by phloem-sucking insect vectors, especially Macropsis fuscula (Hemiptera: Cicadellidae) (de Fluiter and van der Meer, 1953; Linck and Reineke 2019b). During a survey in commercial field in June 2021, over 200 raspberry bushes cv Enrosadira exhibiting typical symptoms of Rubus stunt were observed in Central Bohemia. Symptoms included dieback, leaf yellowing/reddening, stunted growth, severe phyllody and fruit malformations. Most diseased plants were growing in the edge rows of the field (about 80%). No symptomatic plants were observed in the middle of the field. Similar symptoms were observed in private gardens in South Bohemia on raspberry cv Rutrago and blackberry (unknown cultivar) in June 2018 and August 2022, respectively. DNA was extracted using the DNeasy Plant Mini Kit (Qiagen GmbH, Hilden, Germany) from flower stems and parts affected by phyllody of seven symptomatic plants as well as flower stems, leaf midribs, and petioles of five asymptomatic field plants. The DNA extracts were analyzed by a nested polymerase chain reaction assay using universal phytoplasma P1A/P7A primers followed by R16F2m/R1m and the group-specific R16(V)F1/R1 primers (Bertaccini et al. 2019). All samples from the symptomatic plants yielded an amplicon of expected size, while no product was amplified in asymptomatic plants. The P1A/P7A amplicons from three selected plants (two raspberries and one blackberry, each from different location) were cloned and bi-directionally Sanger sequenced (GenBank Accession Nos.OQ520100-2). The sequences spanned nearly full-length of 16S rRNA gene, 16S-23S rRNA intergenic spacer, tRNA-Ile gene, and a partial 23S rRNA gene. BLASTn search revealed the highest sequence identity (99.8-99.9%, query coverage 100%) to 'Candidatus Phytoplasma rubi' strain RS (GenBank Accession No. CP114006). To further characterize the 'Ca. P. rubi' strains, all these three samples were subjected to multigene sequence analysis. Sequences from a major portion of the tuf, rplV-rpsC, rpsH-rplR, uvrB-degV, and rplO-SecY-map genes (Acc. Nos. OQ506112-26) were obtained as described previously (Fránová et al. 2016). Comparison to GenBank sequences confirmed their highest identity (99.6-100%, query coverage 100%) with 'Ca. P. rubi' RS strain, regardless of their geographic location and host (raspberry or blackberry). Recently, Bertaccini et al. (2022) suggested the 98,65 % 'Ca. Phytoplasma' strain identity threshold within 16Sr RNA sequences. In this survey, all three strains sequenced shared ≥99.73% sequence identity of the analysed 16S rRNA gene sequences and the high identity in the other genes with the reference 'Ca. P. rubi' RS strain. To our knowledge, this is the first report of Rubus stunt disease in the Czech Republic as well as the first molecular identification and characterization of 'Ca. P. rubi' from raspberry and blackberry in our country. As Rubus stunt disease is of great economic importance (Linck and Reineke 2019a), the pathogen detection and prompt removal of the diseased shrubs are essential to mitigating the spread and impact of the disease.
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Affiliation(s)
- Jana Franova
- Biology Centre Czech Academy of Sciences Institute of Plant Molecular Biology, 98736, Plant Virology, Ceske Budjovice, Jihočeský, Czech Republic;
| | - Jaroslava Pribylova
- Biology Centre Czech Academy of Sciences Institute of Plant Molecular Biology, 98736, Plant Virology, Ceske Budjovice, Jihočeský, Czech Republic;
| | - Rostislav Zemek
- Biology Centre CAS Institute of Entomology, 112467, Ceske Budejovice, Jihočeský, Czech Republic;
| | - Jiunn Luh Tan
- Biology Centre CAS Institute of Entomology, 112467, Ceske Budejovice, Jihočeský, Czech Republic
- University of South Bohemia in Ceske Budejovice Faculty of Science, 204738, Ceske Budejovice, Jihočeský, Czech Republic;
| | - Zhibo Hamborg
- Norwegian Institute of Bioeconomy Research, 56624, Division of Biotechnology and Plant Health, Høgskoleveien 7, Aas, Norway, 1433;
| | - Dag-Ragnar Blystad
- Norsk Institutt for Biookonomi, 56624, Plant Protection, Høgskolevegen 7, As, Norway, 1433;
| | - Ondrej Lenz
- Biology Centre Czech Academy of Sciences Institute of Plant Molecular Biology, 98736, Plant Virology, Ceske Budjovice, Jihočeský, Czech Republic;
| | - Igor Koloniuk
- Biology Centre Czech Academy of Sciences, 90801, Plant Virology, Ceske Budejovice, Czech Republic;
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23
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Klein-Gordon JM, Hatlen RJ, Miles TD. First report of stem blight caused by Diaporthe eres on highbush blueberry ( Vaccinium corymbosum) in Michigan. Plant Dis 2023. [PMID: 37081627 DOI: 10.1094/pdis-03-23-0463-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
The U.S. is the world's leading producer of highbush blueberries (Vaccinium corymbosum L.), and Michigan is ranked in the top five production states (USDA NASS, 2022). In June and July of 2021, 268 blueberry stem blight samples were collected for a pathogen survey across 22 total fields in Van Buren and Ottawa counties in Michigan. Current season stems with symptoms of necrosis and wilting were collected. Stems were cut just below the necrotic area and cross-sections (2-3 mm long) were surface disinfested in 10% bleach for 1 min, rinsed twice in sterile distilled water, and dried on sterile paper towels. Stem cross-sections were plated onto potato dextrose agar (PDA) amended with 100 µg/ml streptomycin sulfate and 50 µg/ml ampicillin. Plates were incubated at 21°C under a 12-h photoperiod for 5-6 days. Outgrowing fungi with morphology similar to Diaporthe spp. were transferred to new PDA plates 2 consecutive times after 7 days of similar incubation to ensure single colony isolation. After 7 days, colonies consisted of white and light brown mycelia that were mostly flat, with some isolates that had partially raised mycelia towards the center of the plate. After 3-4 weeks, colonies turned brown and gray and produced dark brown pycnidia. Aseptate, hyaline, fusiform to ellipsoid, biguttulate alpha conidia measuring 5.4 to 7.6 x 2.6 to 3.7 µm (n = 60) were produced. No beta conidia were observed. In total, 3 isolates, representing 3 different farms (37-95 km apart) and cultivars ('Duke', 'Jersey', and 'Bluecrop'), as well as 2 counties, were identified as Diaporthe through colony morphology (Gomes et al. 2013, Udayanga et al. 2014). Amplification and subsequent Sanger sequencing were performed for the internal transcribed spacer (ITS) region and portions of the translation elongation factor (TEF) 1-α, β-tubulin (TUB), and histone H3 (HIS) genes using primers ITS5/ITS4 (White et al. 1990), EF1-728F/EF1-986R (Carbone and Kohn 1999), T1/Bt-2b (Glass and Donaldson 1995), and CYLH3F/H3-1b (Glass and Donaldson 1995), respectively. Representative sequences were deposited in NCBI GenBank (accession no. OQ507870-OQ507872 for ITS, and OQ550272-OQ550278 for TEF, HIS, and TUB). BLASTn results revealed 97-100% identity for all 4 genes across other established D. eres isolates reported in Gomes et al. (2013). For example, JMK047 had 99.8% (577/578 bp), 99.7% (327/328 bp), 100% (701/701 bp), and 100% (439/439 bp) homology with ITS, TEF, TUB, and HIS sequences, respectively, of D. eres CBS 439.82 (accession no. KC343090, KC343816, KC344058, KC343574). Koch's Postulates were fulfilled via pathogenicity tests on 2-year-old potted 'Blueray' plants with 2 isolates. Stems were surface sterilized with 1% bleach then 8-mm long pieces of bark were removed using a sterile razor blade to expose the cambium. Plugs of sterile PDA (negative control) or mycelia from 7-day old cultures on PDA (5-mm diameter) were placed onto the cambium layer and sealed with Parafilm. Six stems on unique plants were inoculated per treatment. Plants were grown in a 20.5°C greenhouse with a 14-hr photoperiod. After 3 weeks, the stems inoculated with D. eres isolates showed similar stem blight symptoms to those observed in the field while control stems remained healthy. Re-isolation and sequencing of the ITS region of 3 replicates per treatment with the protocol described above confirmed symptoms correlated with D. eres isolates. This is the first report of D. eres associated with stem blight of highbush blueberry in Michigan, and the second report in the U.S. (Lombard et al. 2014). Increasing prevalence of D. eres in U.S. blueberries may affect disease management programs. References Carbone, I., and Kohn, L. M. 1999. Mycologia 91:553. 10.1080/00275514.1999.12061051. Glass, N. L., and Donaldson, G. C. 1995. Appl. Environ. Microbiol. 61:1323. 10.1128/aem.61.4.1323-1330.1995. Gomes, R. R., et al. 2013. Persoonia 31:1. 10.3767/003158513x666844. Lombard, L., et al. 2014. Phytopathol. Mediterr. 51(2):287. 10.14601/Phytopathol_Mediterr-14034. Udayanga, D., Castlebury, L. A., Rossman, A. Y., Chukeatirote, E., and Hyde, K. D. 2014. Fungal Divers. 67:203-229. 10.1007/s13225-014-0297-2. USDA NASS. 2022. Noncitrus Fruits and Nuts 2021 Summary. White, T. J., et al. 1990. Page 315 in: PCR Protocols: A Guide to Methods and Applications. Academic Press, Inc., San Diego, California, USA.
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Affiliation(s)
- Jeannie M Klein-Gordon
- Michigan State University, 3078, Department of Plant, Soil and Microbial Sciences, East Lansing, Michigan, United States;
| | - Ross Joaquin Hatlen
- Michigan State University College of Agriculture and Natural Resources, 115974, Department of Plant, Soil and Microbial Sciences, East Lansing, Michigan, United States;
| | - Timothy D Miles
- Michigan State University, Department of Plant, Soil and Microbial Sciences, 105 CIPS, East Lansing, Michigan, United States, 48824;
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Karapatzak E, Dichala O, Papanastasi K, Manthos I, Ganopoulos I, Karydas A, Badeka AV, Kosma IS, Kyrkas D, Yfanti P, Nikisianis N, Patakioutas G, Maloupa E, Krigas N. A Multifaceted Evaluation Approach for Greek Native Neglected and Underutilized Forest Fruit Trees and Shrubs as Natural Sources of Antioxidants: Consolidating the Framework for Their Sustainable Agronomic Exploitation. Plants (Basel) 2023; 12:1642. [PMID: 37111865 PMCID: PMC10147030 DOI: 10.3390/plants12081642] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 04/11/2023] [Accepted: 04/11/2023] [Indexed: 06/19/2023]
Abstract
Fruits from wild forest trees and shrubs represent a natural source of antioxidants against oxidative stress and a growing market for novel minor crops. This study presents a multifaceted approach which sets the basis for sustainable agronomic exploitation of selected Greek native germplasm of four traditional but neglected and underutilized forest fruit trees and shrubs, namely Amelanchier ovalis Medik., Cornus mas L., Rosa canina L., and Sambucus nigra L. The studied plant species are traditionally used in Greek ethnobotany but are currently neglected and underutilized in commercial terms, thus characterized as neglected and underutilized plant species (NUPs). The investigation includes new information on the evaluation of the ex situ cultivation of the Greek germplasm (three of the four focal NUPs), thus supplementing respective full datasets for their comparative evaluation based on four evaluation axes (documentation and molecular authentication of genotypes, phytochemical evaluation, asexual propagation via rooting of cuttings, and ex situ cultivation) after multi-year and multifaceted groundwork data previously acquired. Consecutively, the work includes feasibility and readiness timescale evaluation for the sustainable exploitation of each focal species based on existing literature and extant research experience. The feasibility for sustainable exploitation and readiness timescale evaluation results were very encouraging, showing high exploitation feasibility with an already achieved readiness timescale for R. canina and S. nigra, whereas C. mas and A. ovalis showed an achievable readiness in the short term. The comparative evaluation of the Greek native focal NUPs outlined the excellent potential of R. canina, S. nigra, and A. ovalis, and the high potential of C. mas. The results herein illustrate the very high fruit antioxidant potential (free radical scavenging activity) of all focal species, the diverse but effective asexual propagation capacity via cuttings at the species level, and summarize the results of a pilot cultivation trial set up in 2020 (still ongoing) outlining tree growth rates and the onset of fruit production among genotypes and species. Overall, the meta-analysis of previously published data in conjunction with new data generated herein may serve the sustainable exploitation of the studied NUPs.
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Affiliation(s)
- Eleftherios Karapatzak
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
| | - Olga Dichala
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
| | - Katerina Papanastasi
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
| | - Ioannis Manthos
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
| | - Ioannis Ganopoulos
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
| | - Antonis Karydas
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
| | - Anastasia V. Badeka
- Laboratory of Food Chemistry, Department of Chemistry, University of Ioannina, 45110 Ioannina, Greece
| | - Ioanna S. Kosma
- Laboratory of Food Chemistry, Department of Chemistry, University of Ioannina, 45110 Ioannina, Greece
| | - Dimitris Kyrkas
- Department of Agriculture, School of Agriculture, University of Ioannina (UOI), 47100 Kostakii Arta, Greece
| | - Paraskevi Yfanti
- Department of Agriculture, School of Agriculture, University of Ioannina (UOI), 47100 Kostakii Arta, Greece
| | - Nikolaos Nikisianis
- Systems of Forest and Environmental Development (SYSTADA), 8 Amasia Str., 55133 Thessaloniki, Greece
| | - Giorgos Patakioutas
- Department of Agriculture, School of Agriculture, University of Ioannina (UOI), 47100 Kostakii Arta, Greece
| | - Eleni Maloupa
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
| | - Nikos Krigas
- Institute of Plant Breeding and Genetic Resources, Hellenic Agricultural Organization Demeter, 57001 Thessaloniki, Greece
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Marin MV, Seijo TE, Baggio JS, Whitaker VM, Peres NA. Resistance of Strawberry Cultivars and the Effects of Plant Ontogenesis on Phytophthora cactorum and P. nicotianae Causing Crown Rot. Plant Dis 2023; 107:651-657. [PMID: 35801901 DOI: 10.1094/pdis-01-22-0203-re] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Phytophthora crown rot (PhCR) is an important disease of strawberry worldwide. Phytophthora cactorum is the most common causal agent, however, P. nicotianae was also recently reported causing PhCR in the U.S. Therefore, the goals of this study were to evaluate the resistance of strawberry cultivars from Florida and California, and to study the etiology of the two Phytophthora species causing PhCR. Sixteen strawberry cultivars were evaluated over three Florida seasons for susceptibility to P. cactorum, and P. nicotianae. Inoculations at different days after transplanting (DAT) were also carried out to evaluate the ability of both species to cause PhCR at different phenological stages of the plant. Plant wilting and mortality were assessed weekly, and disease incidence, and the area under the disease progress curve were calculated. Cultivars Sensation 'Florida127', 'Winterstar FL 05-107', and 'Florida Radiance' were susceptible, whereas 'Florida Elyana', 'Camarosa', 'Fronteras', 'Sweet Charlie', and 'Strawberry Festival' were highly resistant to both Phytophthora species. However, some cultivars exhibited stronger resistance to one species over the other. P. cactorum caused more PhCR when plants were inoculated at transplanting, 45, and 60 DAT, whereas P. nicotianae only caused disease when inoculated at transplanting. These results emphasize the importance of screening for disease resistance to guide management recommendations in commercial strawberry production as well as the need for proper pathogen identification since cultivar susceptibility might differ. Varying susceptibility to P. cactorum and P. nicotianae at different growth stages emphasizes the importance of considering both plant and pathogen biology when making management recommendations.
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Affiliation(s)
- Marcus V Marin
- IFAS Gulf Coast Research and Education Center, Department of Plant Pathology, University of Florida, Wimauma, FL 33598
| | - Teresa E Seijo
- IFAS Gulf Coast Research and Education Center, Department of Plant Pathology, University of Florida, Wimauma, FL 33598
| | - Juliana S Baggio
- IFAS Gulf Coast Research and Education Center, Department of Plant Pathology, University of Florida, Wimauma, FL 33598
| | - Vance M Whitaker
- IFAS Gulf Coast Research and Education Center, Department of Horticultural Science, University of Florida, Wimauma, FL 33598
| | - Natalia A Peres
- IFAS Gulf Coast Research and Education Center, Department of Plant Pathology, University of Florida, Wimauma, FL 33598
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Shrestha U, Dee MM, Ownley BH, Butler DM. First Report of Strawberry Black Root Rot Caused by Globisporangium sylvaticum in Tennessee, USA. Plant Dis 2023; 107:2890. [PMID: 36825322 DOI: 10.1094/pdis-01-23-0007-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Globisporangium sylvaticum (syn. Pythium sylvaticum), is an oomycete that causes root rot and damping off of field crops, ornamentals, and vegetables. Several species in Pythiaceae are associated with black root rot of strawberry [(Fragaria × ananassa) Duchesne] (Millner 2006). Mature, stunted 'Chandler' strawberry plants, with reduced shoot vigor and black necrotic roots, were collected from Rhea County (June 2018) and Cumberland County, TN (May 2019). Aboveground symptoms occurred in low incidence (<5% of plants) in the fields. Plant roots were rinsed with tap water, cut into 1 to 3 cm pieces, and surface-disinfested (70% ethanol, 1 min) followed by a sterile water rinse. Root segments were crushed, placed on 20% V8 juice agar, and incubated in the dark at 21°C for 3 days. White fluffy mycelia grew from a majority of roots and coenocytic hyphae with globose hyphal swellings, delimited from hyphae by septa, were observed with microscopy. Hyphae were initially branched, curled, hyaline, and aseptate; however, septations were observed in older cultures. Globose structures (terminal and intercalary) were identified as sporangia [11 to 32 (avg. 22.1) µm diameter] when zoospores were observed (Parikh et al. 2022). Oospores [9 to 21 (avg. 16) μm diameter] were globose, smooth, aplerotic, and thick-walled. Oogonia, with or without one or more inflated antheridia, were observed when isolates were paired in culture, characteristics consistent with descriptions of Campbell and Hendrix (1967), Pratt and Green (1971), van der Plaats-Niterink (1981), and Uzuhashi et al. (2010). Genomic DNA was extracted (Extract-N-Amp™; Sigma-Aldrich, MO) for PCR amplification of internal transcribed spacer (ITS) regions of rDNA with primers ITS1/ITS4 (White et al. 1990); ITS and large subunit rRNA regions with primers UN-up18S42/UN-lo28S22 (Robideau et al. 2011); and cytochrome c oxidase subunit I (COI) mitochondrial DNA with primers OomCoxI-Levup/OomCoxI-Levlo (Robideau et al. 2011). Primers ITS1/ITS4 were used to amplify isolate TN (GenBank Accession MW386310, which had 100% homology with reference isolate MK326528). Primers UN-up18S42/UN-lo28S22 amplified isolates SAP18 and OO1 (Accessions MZ881935 and MZ881936, which had 99.8% homology with HQ665236), and COI primers amplified isolate SAP18 (Accession OK020192, which had 100% homology with GU071816 and KT692835). To satisfy Koch's postulates, inoculum of G. sylvaticum grown on autoclaved wheat seeds was added (5% w/v) to planting mix (1 peat:1 sand, v/v). Young, rooted strawberry plants were planted in 1.2-L pots with infested (n = 6) and control (no pathogen, n = 6) mixes, which was saturated with deionized water. Pots were covered with clear plastic for 48 h to maintain high humidity. Plants were grown in a greenhouse (24°C avg.) for 8 weeks. The disease assay was repeated. All plants in infested mix died, with black, necrotic roots. Plants in the control mix were healthy and well-established. The pathogen was reisolated from roots of all inoculated plants and confirmed to be G. sylvaticum based on morphology and molecular analyses. Root disease of strawberry caused by G. sylvaticum has been reported in the USA (Campbell and Hendrix 1967; Nemec and Sanders 1970; Pratt and Green 1971). This is the first report of G. sylvaticum causing root rot of strawberry in Tennessee. With the loss of methyl bromide, sustainable disease control strategies are needed to provide effective management options for strawberry black root rot.
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Affiliation(s)
- Utsala Shrestha
- The University of Tennessee Knoxville, 4292, Plant Sciences, Knoxville, Tennessee, United States;
| | - Mary M Dee
- The University of Tennessee Knoxville, 4292, Entomology and Plant Pathology, Knoxville, Tennessee, United States;
| | - Bonnie H Ownley
- The University of Tennessee Knoxville, 4292, Entomology and Plant Pathology, Knoxville, Tennessee, United States;
| | - David M Butler
- The University of Tennessee Knoxville, 4292, Plant Sciences, Knoxville, Tennessee, United States;
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Marin MV, Wang NY, Seijo T, Druffel KL, McGuin RL, Deng Z, Peres NA. Pseudocercospora pancratii Causing Leaf Spots on Commercial Blackberry ( Rubus sp.) in Florida. Plant Dis 2023; 107:131-135. [PMID: 35749667 DOI: 10.1094/pdis-04-22-0900-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Blackberry (Rubus L. subgenus Rubus Watson) is a deciduous berry crop that is the fourth most economically important berry crop, and its production is expanding in the southeastern United States. However, since most commercially available cultivars were bred under temperate conditions, they are not always well adapted and could be threatened by new pathogen populations inhabiting subtropical areas. In 2017, plants showing purple or brown leaf spots and angular-to-irregular lesions on both leaf surfaces, with clusters of black conidiophores at the center, were observed in a field trial at the University of Florida's Gulf Coast Research and Education Center (UF/GCREC) in Wimauma, FL. A fungus resembling Cercospora/Pseudocercospora was isolated from the lesions. The ribosomal DNA internal transcribed spacers, the translation elongation factor 1-alpha, and the actin genes were amplified and sequenced. Based on the phylogenetic analysis, the closest related species was Pseudocercospora pancratii. Pathogenicity assays and subsequent reisolation confirmed that this species is the causal agent of the disease. Among eight cultivars screened, no complete resistance was found. However, 'Osage' was the least susceptible, and 'Kiowa' was the most susceptible. This study is the first report of P. pancratii causing leaf spots on blackberry worldwide, and it may help shape future research into disease epidemiology and management for a crop that is rapidly expanding but has very limited disease information currently available for Florida growers.
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Affiliation(s)
- Marcus V Marin
- University of Florida, Plant Pathology Department, Gulf Coast Research and Education Center, Wimauma, FL 33598
| | - Nan-Yi Wang
- University of Florida, Plant Pathology Department, Gulf Coast Research and Education Center, Wimauma, FL 33598
| | - Teresa Seijo
- University of Florida, Plant Pathology Department, Gulf Coast Research and Education Center, Wimauma, FL 33598
| | - Keri L Druffel
- University of Florida, Plant Pathology Department, Gulf Coast Research and Education Center, Wimauma, FL 33598
| | - Rebeca L McGuin
- University of Florida, Plant Pathology Department, Gulf Coast Research and Education Center, Wimauma, FL 33598
| | - Zhanao Deng
- University of Florida, Plant Pathology Department, Gulf Coast Research and Education Center, Wimauma, FL 33598
| | - Natalia A Peres
- University of Florida, Plant Pathology Department, Gulf Coast Research and Education Center, Wimauma, FL 33598
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Oliver JE, Lewis KJ, Post K, Taylor S, Jogi A. First Report of Bacterial Wilt Disease Caused by Ralstonia solanacearum on Southern Highbush Blueberries ( Vaccinium corymbosum interspecific hybrids) in Georgia U.S.A. Plant Dis 2022; 107:2210. [PMID: 36572973 DOI: 10.1094/pdis-07-22-1645-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
Abstract
Members of the Ralstonia solanacearum (Rs) species complex have recently been reported to cause bacterial wilt on southern highbush (SHB) blueberries in Florida (Norman et al. 2018), a disease first reported on blueberry (northern highbush; Vaccinium corymbosum) in New Jersey (Patel et al. 2013). SHB blueberries are widely grown in the southern United States, and SHB cultivars represent the majority of the blueberry acreage in Georgia - the U.S. state with the largest blueberry acreage (NASS 2022). In Fall 2020, three-year old SHB plants (cv. 'Indigocrisp') showing leaf bronzing, wilting, and dieback were collected from two field sites in Clinch County, GA. At these locations, numerous plants were rapidly dying, with symptoms appearing to have spread down rows. Plant material tested positive using the ImmunoStrip® for Rs (Agdia, Inc., Elkhart, IN). From one location, the remaining sample was submitted to USDA-APHIS Select Agent Services who determined that Rs was present but a select agent (Rs Race 3, Biovar 2) was not. Following this, six adjacent, symptomatic SHB plants were collected from the same field location. These plants tested positive using the ImmunoStrip® for Rs, and red-pigmented mucoid colonies typical of Rs formed within 48 h at 28°C on triphenyltetrazolium chloroide (TZC) isolation medium (Kelman 1954). DNA was extracted from pure Rs cultures using the cetyltrimethylammonium bromide (CTAB) method (Doyle and Doyle 1987) and tested using polymerase chain reaction (PCR). Primers pairs AMB013/AMB014 (Fegan and Prior 2005) and ENDO-F/ENDO-R (Ji et al. 2007) were used to amplify 558 nt and 843 nt portions of the 16S rRNA region and Rs endoglucanase gene, respectively. Resulting amplicons were purified using an E.Z.N.A.® Cycle Pure Kit (Omega Bio-Tek, Norcross, GA), Sanger sequenced in both directions (Eurofins Genomics, Louisville, KY), and compared to publicly available Rs sequences in Genbank. The 16 rRNA sequence from all obtained isolates (accession ON938207) had 100% identity to Rs strain CFBP2957 (FP885897), while the endoglucase sequence (ON938206) had 100% identity to phylotype IIa, sequevar 5 Rs strain CIP-426 (MF461810) and phylotype IIa, sequevar 39 Rs strain 19-058 (MT314067), among others. To fulfill Koch's postulates, an isolate ('Ral21-1') was grown on TZC medium for 48 h at 28°C and suspended in 8.5 g/L NaCl at 1 x 108 CFU/ml. Five young, tissue cultured SHB plants (cv. 'Kestrel') in 25 cm pots were drenched with 50 ml of Rs suspension. For six weeks, plants were maintained in the greenhouse at 21-32°C. Typical bacterial wilt symptoms (leaf bronzing/scorching) developed in all inoculated plants, and infections were confirmed using Immunostrip®. Rs was reisolated and confirmed via PCR and sequencing as previously described. While Ralstonia has been known to cause disease on numerous crops in Georgia, this represents a first report of bacterial wilt in Georgia blueberries. Relative to rabbiteye blueberries (V. virgatum), recent reports suggest that SHB are much more susceptible to bacterial wilt (Conner et al. 2022). Accordingly, given the transition from rabbiteye to SHB within Georgia's blueberry production region over the past two decades and the ability of Rs to spread easily in water, soil, or via infected plant material, the presence of this disease within the state represents a significant threat to blueberry production. Additional characterization of Ralstonia isolates from Georgia may help assess the risk of future outbreaks.
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Affiliation(s)
- Jonathan E Oliver
- University of Georgia, 1355, Plant Pathology, 2360 Rainwater Road, Tifton, Georgia, United States, 31793
- University of Georgia;
| | - Kippy J Lewis
- University of Georgia, 1355, Plant Pathology, Tifton, Georgia, United States;
| | - Kimberly Post
- University of Georgia Cooperative Extension, Clinch and Lanier counties, Lakeland, Georgia, United States;
| | - Shae Taylor
- University of Georgia, 1355, Plant Pathology, Tifton, Georgia, United States;
| | - Ansuya Jogi
- University of Georgia, Plant Pathology, Athens, Georgia, United States;
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Baggio JS, Suguinoshita Rebello C, Bolognesi de Morais M, Marin MV, Gama AB, Forcelini BB, Mertely J, Peres NA. Efficacy of Single- and Multi-Site Fungicides Against Neopestalotiopsis spp. of Strawberry. Plant Dis 2022. [PMID: 36541878 DOI: 10.1094/pdis-08-22-1929-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
Recently, the Florida strawberry industry faced unprecedented outbreaks of an emerging disease caused by the fungus Neopestalotipsis spp. Currently, there are no fungicides labeled to control this disease in the U.S. and the efficacy of single- and multi-site fungicides is unknown. Therefore, this study aimed to determine the in vitro sensitivity of Neopestalotiopsis spp. isolates to fungicides with different modes of action and to evaluate the efficacy of these products on detached fruit and in the field. In preliminary in vitro tests, 30 commercially available fungicides were screened using discriminatory doses. The effective concentration that inhibited mycelial growth by 50% (EC50) was determined for the most effective single-site fungicides. Four field experiments were conducted during the 2019-20, 2020-21, and 2021-22 seasons to determine product efficacy in managing the disease. The single-site fungicides fludioxonil, fluazinam, the sterol de-methylation inhibitors (DMIs), and the multi-sites captan, thiram, and chlorothalonil were the most effective in inhibiting pathogen growth and suppressing disease development. Conversely, products in FRAC groups 1 (MBC) and 7 (SDHI), except for benzovindiflupyr, were not effective against Neopestalotiopsis spp. Resistance to fungicides from FRAC group 11, e.g., azoxystrobin, was confirmed by the presence of the G143A mutation in the cytochrome b gene together with inoculation tests and field trials. Our results provide information to support or discourage the registration of fungicides to manage Neopestalotiopsis fruit rot and leaf spot in strawberry production. .
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Affiliation(s)
- Juliana Silveira Baggio
- University of Florida, Gulf Coast Research and Education Center, Wimauma, Florida, United States
- Syngenta Crop Protection, Vero Beach, Florida, United States;
| | - Carolina Suguinoshita Rebello
- University of Florida Gulf Coast Research and Education Center, Plant Pathology, 14625 County Road 672, Wimauma FL 33598, Wimauma, Florida, United States, 33598;
| | | | - Marcus Vinicius Marin
- Gulf Coast Research and Education Center, University of Florida, Plant Pathology, 14625 County Roady 672, Wimauma, Florida, United States, 33598;
| | - Andre B Gama
- University of Florida, Plant Pathology, 14625 County Road 672, Wimauma, Florida, United States, 33598;
| | - Bruna Balen Forcelini
- University of Florida, Plant Pathology, 14625 County Road 672, Wimauma, Florida, United States, 33598;
| | - James Mertely
- University of Florida, Gulf Coast REC, 14625 County Rd 672, Wimauma, Florida, United States, 33598;
| | - Natalia A Peres
- University of Florida, GCREC, Plant Pathology, 14625 CR 672, Wimauma, Florida, United States, 33598
- United States;
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Gonçalves MP, Simões ALT, Boufleur TR, Santos RFD, Baroncelli R, Amorim L. First Report of Mulberry Rust Caused by Cerotelium fici on Morus nigra in Brazil. Plant Dis 2022; 107:2259. [PMID: 36410015 DOI: 10.1094/pdis-11-22-2656-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Leaf rust caused by Cerotelium fici (Cast.) Arth. is the main disease affecting Moraceae family plants, such as Ficus and Morus species (Galleti and Rezende 2016; Srikantaswamy et al. 2006). In August 2020, rust symptoms were observed in 100% of mulberry (Morus nigra L.) trees in an experimental orchard (Piracicaba, SP, Brazil; 22°42'28"S, 47°37'42"W). Mulberry leaves with high rust severity became yellowish and fell-off prematurely. Pustules were light brown with yellowish halo and presented mean size of 0.9 mm2. Uredinial paraphyses (n = 50) measured 42.2 ± 0.67 µm long with wall uniformly ca 0.6-1.1 μm thick. Urediniospores were brownish, echinulate, globoid to broadly ellipsoid, and measured 27.1 ± 0.29 × 21.0 ± 0.27 µm with a wall thickness of 0.6 ± 0.01 µm (n = 100). The morphology of the urediniospores observed in this study was similar to that reported in the literature for C. fici on Morus alba and Ficus spp. (Gupta et al. 1994; McKenzie 1986; Hennen et al. 2005). We used a low-coverage genome-skimming approach to retrieve genetic information of the rRNA cluster and the mtDNA. Genomic DNA was extracted from 3-4 mg of stored urediniospores at -80 °C, macerated in liquid nitrogen, using a modified cetyl trimethylammonium bromide extraction procedure (Lo Piccolo et al. 2012), and sequenced with 150-bp paired-end reads on Illumina NovaSeq 6000 System. Raw data, (45,761,957 X 2 reads) were assembled with SPAdes v3.15.1 (Bankevich et al., 2012) and the output used to create a custom BLAST database. Loci used for the phylogenetic analyses were identified by BLASTn using, as a query, sequences of C. fici from Ficus sp. from Australia publicly available: Accession No. MH047210.1 for the rRNA and MW036502.1 for COX3. The retrieved sequences were deposited in GenBank under accession numbers OM296992 and OP797407 for the partial rRNA cluster and COX3, respectively. The Bayesian inference phylogenetic analysis of the three concatenate loci (18S, 28S, and COX3) revealed that the isolate obtained in this study (MN1) was clustered in a well-supported clade with C. fici type species. Pathogenicity tests were conducted using mulberry potted plants under greenhouse conditions (25 ± 5 °C). The urediniospores suspension (5 × 104 urediniospores ml-1) with 0.05% Tween 20 was sprayed with an airbrush on fully expanded leaves until run-off. As a control, mulberry plants were sprayed with distilled water and kept under the same conditions. Inoculated and mock-inoculated plants were kept in a dark moist chamber at 23 °C (± 2 °C) for 24 h. After this period, plants were moved to the greenhouse. The experimental design was completely randomized with five replicates, each replicate consisted of one potted plant and the experiment was performed twice. At 12 days post-inoculation, all inoculated plants showed rust symptoms identical to those observed in the field, whereas control plants had no symptoms. The first symptoms were small pustules on the abaxial surface of fully expanded leaves. Small chlorotic lesions were observed on the adaxial leaf surface, which evolved into necrotic lesions. The pathogen was re-inoculated into potted plants, where it was maintained through monthly inoculations. To our knowledge, this is the first report of mulberry rust on M. nigra in Brazil. As mulberry leaves are the only natural food for silkworm (Bombyx mori L.), rust poses a significant threat to the sericulture industry because the disease can decrease production and quality of mulberry foliage.
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Affiliation(s)
- Manoel Penachio Gonçalves
- Universidade de São Paulo Escola Superior de Agricultura Luiz de Queiroz, 54538, Fitopatologia e Nematologia, Piracicaba, São Paulo, Brazil;
| | - Ana Laura Toledo Simões
- Universidade de São Paulo Escola Superior de Agricultura Luiz de Queiroz, 54538, Fitopatologia e Nematologia, Piracicaba, São Paulo, Brazil;
| | - Thais Regina Boufleur
- USP ESALQ, 54538, Plant Pathology and Nemathology, Av. Pádua Dias, 11, Piracicaba, São Paulo, Brazil, 13418-900;
| | - Ricardo Feliciano Dos Santos
- Universidade de São Paulo Escola Superior de Agricultura Luiz de Queiroz, 54538, Fitopatologia e Nematologia, Piracicaba, São Paulo, Brazil;
| | - Riccardo Baroncelli
- Universidad de Salamanca, Departamento de Microbiología y Genética, Centro Hispano-Luso de Investigaciones Agrarias (CIALE), Campus de Villamayor, Calle Del Duero, 12, Villamayor, Salamanca, Spain, 37185;
| | - Lilian Amorim
- Universidade de São Paulo Escola Superior de Agricultura Luiz de Queiroz, 54538, Fitopatologia e Nematologia, Piracicaba, São Paulo, Brazil;
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Heger L, Giraud D, Miles LA, Byrne J, Miles TD. First report of Neofusicoccum ribis causing stem blight and dieback of blueberry (Vaccinium corymbosum) in Michigan. Plant Dis 2022; 107:2224. [PMID: 36401849 DOI: 10.1094/pdis-07-22-1519-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
In July 2020, a 3-year-old 'Envoy' northern highbush blueberry bush (Vaccinium corymbosum L.) from a commercial farm in Van Buren County, Michigan was submitted to the Plant & Pest Diagnostics laboratory at Michigan State University. Field disease assessments across the 2-acre planting were an incidence of 2-5% and a severity of 50-100%. Symptoms included red shoot flagging and dead shoots retaining dry leaves, shoots with light green leaves and necrotic margins, and brown-black cankers at the base of the symptomatic shoots. Shoot sections displaying wood discoloration were surface disinfested by dipping in 95% ethanol and flame sterilized. The internal discolored tissues (0.5 cm2) were plated onto 1% ampicillin and streptomycin, quarter-strength potato dextrose agar (PDA) and incubated at room temperature until fungal colonies were observed. A fungus with rapid growth, developing white and then dark gray mycelium, resembling species in the family Botryosphaeriaceae was isolated and subcultured. After DNA extraction and amplification, sequences of three loci were obtained: the internal transcribed spacer (ITS) region, β-tubulin (Bt), and elongation factor 1-α (EF1) using primer pairs ITS1/ITS4, Bt2a/Bt2b, and EF1-728/EF1-986R, respectively (Slippers et al. 2004). The sequences showed 100% identity with Genbank numbers KF766205 (ITS region, 562 bp - OP588109), MT592721 (Bt, 436 bp - OP585548), and MT592229 (EF1, 306 bp - OP585547) of N. ribis (Slippers et al. 2013, Zhang et al. 2021). Sequences were identified using PopSet 1995604550 (Zhang et al. 2021). Pathogenicity was tested on 2-year-old 'Blueray' blueberries. Five plants, 3 shoots per plant (n = 15) were surface-sterilized with a 3% bleach solution by rinsing, wounded with razor blades using a scratching method in 'X' patterns across the length of the wound, and then inoculated using mycelium plugs (5 mm) from 7-day old cultures grown on full-strength PDA. Plugs were crushed and spread onto the wound and the wound was wrapped with parafilm. Control plant shoots (n = 9) were mock inoculated using sterile PDA plugs. Plants were maintained in the greenhouse at 23°C under a 14-hour photoperiod and imaged at 0-, 7-, and 12-days post inoculation (dpi). Symptoms began developing within 7 dpi. At 12 dpi, 9 of 15 inoculated shoots began displaying leaf necrosis and deep red or brown stem discoloration 6 cm above and below the wound, while controls remained healthy. Fungi morphologically identical to the original isolate were reisolated from sections taken from 2.5, 6.3, and 7 cm above and below the inoculation site. Species identity was confirmed by sequencing as described above. Neofusicoccum species are widespread and commonly associated with canker and dieback symptoms of blueberries (Flor et al. 2022). To our knowledge, this is the first report of stem blight and dieback caused by N. ribis in Michigan blueberry production. The species N. parvum and N. ribis have been reported on southern highbush blueberries in California (Koike et al. 2014) and Florida (Wright and Harmon 2010), but neither has been reported on blueberry in Michigan. Accurate diagnoses of Botryosphaeria fungal species in blueberries is critical for effective disease control and yield loss reduction.
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Affiliation(s)
- Lexi Heger
- Michigan State University, 3078, Dept. of Plant, Soils, and Microbial Sciences, East Lansing, Michigan, United States;
| | | | - Laura Avila Miles
- Michigan State University, 3078, Plant, Soil and Microbial Sciences, Plant & Pest Diagnostics, 578 Wilson Road, CIPS Room 114, EAST LANSING, Michigan, United States, 48824;
| | - Jan Byrne
- Michigan State University, Plant, Soil, and Microbial Sciences, 114 CIPS, Diagnostic Services, East Lansing, Michigan, United States, 48824-6469;
| | - Timothy D Miles
- Michigan State University, Department of Plant, Soil and Microbial Sciences, 105 CIPS, East Lansing, Michigan, United States, 48824;
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Ji S, Li H, Zhou Y, Li X, Yan J, Zhang W. First Report of Bacterial Wilt Caused by Enterobacter mori of Strawberry in Beijing, China. Plant Dis 2022; 107:1936. [PMID: 36366829 DOI: 10.1094/pdis-08-22-1895-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Strawberry (Fragaria × ananassa) is an economically important crop in China, and a crucial part of urban agriculture in Beijing. In November 2020, wilt symptoms were observed in strawberry seedlings in several greenhouses in the Pinggu District of Beijing city (40.14° N; 117.12° E). The average disease incidence was 20%. Water-soaked lesions appeared along the veins of diseased strawberry leaves and bacterial ooze was also present on severely affected leaves. Bisected crowns had a reddish-brown discoloration in the xylem which later turned black. Three diseased strawberry seedlings were collected for pathogen identification. Isolations were conducted from stem, crown, leaf, and roots of diseased strawberry plants. Samples were surface sterilized by immersion in 70% ethanol for 30 s and rinsed three times with sterile distilled water, before being placed on potato dextrose agar (PDA) medium and incubated at 28℃. Several bacterial colonies grew on the medium after 24 h. Colonies were then purified on Lysogeny broth (LB) agar plates using the streak plate method. Twenty-nine isolates were obtained from 36 diseased tissue samples, which were from stem(10), crown(12), leaf(2) and roots(5) separately. All isolates appeared white, round, opaque and smooth on LB plates. To identify the isolates, genomic DNA was extracted from nine purified bacterial colonies (CM1 to CM9). The fragments of atpD, gyrB, infB and rpoB gene were amplified and sequenced with primers atpD 01-F/ atpD 02-R, gyrB 01-F/ gyrB 02-R, and infB 01-F/ infB 02-R (Brady et al. 2008) and RpoB-F/ RpoB-R (Mollet et al. 1997), respectively. All atpD, gyrB, infB and rpoB sequences belonging to the isolates were identical. The sequences of atpD, gyrB, infB and rpoB gene of isolates CM1 and CM3 were deposited in GenBank under accession numbers ON055247, ON055248, ON055249, ON055250, ON055251, ON055252, OL771192 and OL771193. BLAST searches were conducted with the sequences of atpD, gyrB, infB and rpoB. The atpD, gyrB, infB and rpoB sequences of the obtained isolate showed 99.53%, 99.06%, 99.19% and 99.80% identity with the corresponding sequences of Enterobacter mori strains, respectively. Phylogenetic analysis was performed using the maximum likelihood (ML) method with the CIPRES Science Gateway platform (http://www.phylo.org/) based on the combined atpD, gyrB, infB and rpoB sequences (Brady et al. 2013; Palmer et al. 2018). In the phylogenetic tree, the isolates were clustered together with E. mori strain LMG 25706. To confirm the pathogenicity, 200 μL of bacterial suspensions (108 CFU/mL) of the two isolates were injected into the crown of six healthy Fragaria × ananassa cv. Bennihope strawberry seedlings respectively with 1 mL sterilized syringe, and the control seedlings were injected with sterile water. The seedlings were kept in a moist chamber (28°C, 16-h light and 8-h dark period) for 2 days. Then all the seedlings were transferred to the greenhouse with conditions similar to those where the diseased plants were collected. Forty days after inoculation, old leaves started to wilt and leaf midvein necrosis, along with xylem discoloration, was observed in inoculated plants. No symptoms were observed in the control group. Pathogenicity tests were conducted three times with similar results. The bacteria were re-isolated from the symptomatic diseased strawberry plants and confirmed as E. mori by morphological and sequence analyses as above, fulfilling Koch's postulates. To the best of our knowledge, this is the first report of strawberry bacterial wilt caused by E. mori. Due to the significant crop loss from this disease, more research is needed in epidemiology and disease management.
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Affiliation(s)
- Shuxian Ji
- Beijing Academy of Agriculture and Forestry Sciences, Institute of Plant Protection, Beijing, Beijing, China;
| | - Hongxia Li
- Beijing Academy of Agriculture and Forestry Sciences, Institute of Plant Protection, Beijing, Beijing, China;
| | - Yueyan Zhou
- Beijing Academy of Agriculture and Forestry Sciences, Institute of Plant Protection, Beijing, Beijing, China
- Mae Fah Luang Univ, School of Science, Chiang Rai, Thailand;
| | - Xinghong Li
- Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Haidian District, Beijing, China
- Institute of Plant Protection, Beijing, China;
| | - Jiye Yan
- Beijing Academy of Agriculture and Forestry Sciences, Institute of Plant Protection, Beijing, Beijing, China;
| | - Wei Zhang
- Beijing Academy of Agriculture and Forestry Sciences, Institute of Plant Protection, beijing, beijing , China;
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Weldon WA, McGhee GC, Jones LA, Stockwell VO. Taxonomic Reclassification of the Fungal Pathogen Causing Dry Berry Disease of Caneberries into the Division Ascomycota as Monilinia rubi. Plant Dis 2022; 106:2788-2796. [PMID: 35442057 DOI: 10.1094/pdis-11-21-2618-sr] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
As molecular genetic techniques improve and sequence data becomes available for more fungal species, taxonomic classifications historically based upon growth morphology alone are being revisited and occasionally reclassified. Herein, we present such an instance for the fungal pathogen that causes dry berry disease of caneberries. The organism was previously described as the basidiomycete fungus Rhizoctonia rubi based upon the pathogen's production of Rhizoctonia-like angular branching hyphae. Utilizing molecular genetic techniques unavailable when the pathogen was first characterized in 1959, three housekeeping gene regions (ITS, β-tubulin, and G3PDH) were sequenced across 13 contemporary dry berry isolates, as well as the original 1959 R. rubi type strain, CBS382.59. The resulting neighbor-joining, maximum likelihood, and Bayesian phylogenies for single and multilocus sequences provide strong evidence that the dry berry pathogen was misclassified. This data, in addition to revisiting in vivo macroscopic and microscopic growth morphology, again comparing contemporary dry berry isolates to the CBS382.59 type strain, suggests that the causal organism is a new species within the genus Monilinia that we propose be classified as Monilinia rubi. A transition from designation as a basidiomycete fungus to an ascomycete fungus could have implications on chemical management decisions, as well as the assumptions made about cell structure and the pathogen's putative life cycle.
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Affiliation(s)
| | - Gayle C McGhee
- USDA-ARS Horticultural Crops Research Unit, Corvallis, OR 97330
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Wang C, Duan T, Shi L, Zhang X, Fan W, Wang M, Wang J, Ren L, Zhao X, Wang Y. Characterization of Volatile Organic Compounds Produced by Bacillus siamensis YJ15 and Their Antifungal Activity Against Botrytis cinerea. Plant Dis 2022; 106:2321-2329. [PMID: 35380464 DOI: 10.1094/pdis-01-22-0230-re] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
To develop an effective and environmentally safe strategy to control postharvest gray mold caused by Botrytis cinerea, Bacillus siamensis strain YJ15 isolated from blueberry was used to test the biocontrol potential. It is interesting to find that the volatile organic compounds (VOCs) emitted from strain YJ15 exhibited significant antifungal activity against Botrytis cinerea as well as 11 other plant-pathogenic fungi, with a percentage of mycelial growth inhibition from 74.96 to 92.81%. Additionally, VOCs from strain YJ15 could reduce significantly the disease incidence and lesion diameter with the increasing of fermentation time, indicating great biocontrol potential for controlling blueberry postharvest gray mold. Furthermore, the VOCs were collected by using headspace solid-phase microextraction fiber, and the composition of VOCs was further revealed by using gas chromatography coupled with quadruple mass spectrometry. In total, 24 kinds of VOCs, including 5 alkanes, 2 aldehydes, 3 ketones, 5 alcohols, 1 alkene, 5 acids and esters, 2 aromatic compounds, and 1 sulfur compound, were emitted at 1, 3, 5, and 7 days after inoculation. Among these VOCs, eight antifungal VOCs could inhibit mycelial growth of B. cinerea. It is important to highlight that, although 1-butanol and 3-methyl-1-butanol were the most abundant compounds, 2-ethylhexanol, 1-heptanol, and 1,3-xylene have proved to be more toxic to B. cinerea than 3-methyl-1-butanol, propanethioic acid, 2,2-dimethyl-, ethyl 2-methylbutyrate, 2-heptanone, and 1-butanol, which provide new, promising biofumigants for the control of postharvest gray mold caused by B. cinerea.
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Affiliation(s)
- Chunwei Wang
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
- State Key Laboratory of Sustainable Dryland Agriculture (in preparation), Shanxi Agricultural University, Taiyuan, Shanxi 030031, P.R. China
| | - Tiankun Duan
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
| | - Luxin Shi
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
| | - Xiqian Zhang
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
| | - Weixin Fan
- Experiment Teaching Center, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
| | - Meiqin Wang
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
| | - Jianming Wang
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
| | - Lu Ren
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
| | - Xiaojun Zhao
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
- State Key Laboratory of Sustainable Dryland Agriculture (in preparation), Shanxi Agricultural University, Taiyuan, Shanxi 030031, P.R. China
| | - Yan Wang
- College of Plant Protection, Shanxi Agricultural University, Taigu, Shanxi 030801, P.R. China
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Onofre RB, Gadoury DM, Stensvand A, Bierman A, Rea M, Peres NA. UV-Transmitting Plastics Reduce Powdery Mildew in Strawberry Tunnel Production. Plant Dis 2022; 106:2455-2461. [PMID: 35224988 DOI: 10.1094/pdis-10-21-2195-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Strawberry powdery mildew, caused by Podosphaera aphanis, can be particularly destructive in glasshouse and plastic tunnel production systems, which generally are constructed of materials that block ultraviolet (UV) solar radiation (about 280 to 400 nm). We compared epidemic progress in replicated plots in open fields and under tunnels constructed of polyethylene, which blocks nearly all solar UV-B, and two formulations of ethylene tetrafluoroethylene (ETFE), one of which contained a UV blocker and another that transmitted nearly 90% of solar UV-B. Disease severity under all plastics was higher than in open-field plots, indicating a generally more favorable environment in containment structures. However, the foliar severity of powdery mildew within the tunnels was inversely related to their UV transmissibility. Among the tunnels tested, incidence of fruit infection was highest under polyethylene and lowest under UV-transmitting ETFE. These effects probably transcend crop, and the blocking of solar UV transmission by glass and certain plastics probably contributes to the widely observed favorability of greenhouse and high-tunnel growing systems for powdery mildew.
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Affiliation(s)
- Rodrigo B Onofre
- University of Florida, Gulf Coast Research and Education Center, Wimauma, FL 33598, U.S.A
| | - David M Gadoury
- Cornell University, Geneva New York State Agricultural Experiment Station, Geneva, NY 14456, U.S.A
| | - Arne Stensvand
- Norwegian Institute of Bioeconomy Research, Ås 1431, Norway
- Norwegian University of Life Sciences, Ås 1433, Norway
| | | | - Mark Rea
- Mount Sinai Icahn School of Medicine, Light and Health Research Center, New York, NY 10029, U.S.A
| | - Natalia A Peres
- University of Florida, Gulf Coast Research and Education Center, Wimauma, FL 33598, U.S.A
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Castro JF, Millas P, Cisterna-Oyarce V, Carrasco J, Santelices C, Muñoz-Reyes V, Guerra M, Barra-Bucarei L, France A. First report of Colletotrichum fioriniae causing anthracnose fruit rot on Vaccinium corymbosum in Chile. Plant Dis 2022; 107:959. [PMID: 36044646 DOI: 10.1094/pdis-06-22-1340-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Vaccinium corymbosum L. is the most cultivated blueberry species in Chile. Chilean fruits typically take up to 50 days to reach oversea markets; therefore, controlling post-harvest pathogens is of outmost importance to maintain international food safety and quality standards. In February 2019, the Microbial Genetic Resources Bank at INIA received fruits of V. corymbosum cv. 'Brigitta Blue' from Mariquina (-39.567869, -72.992461), located in the southern Chilean blueberry production zone, for post-harvest disease diagnosis. Asymptomatic fruits were incubated in moist-chambers at 25 °C with light/darkness cycles of 12 h. After 5 d, some fruits showed sunken areas and small surface wounds that exudated orange masses of conidia; under the epidermis, gray acervuli were also detected. After 15d, these fruits became dehydrated, mummified, and covered by mycelia, all characteristic symptoms of anthracnose (Wharton and Schilder 2008). In Chile, Colletotrichum gloeosporioides has, thus far, been the only causal agent of anthracnose reported in blueberry (Lara et al. 2003). Conidia exudated from the diseased fruit were inoculated on potato-dextrose agar (PDA) and incubated at 25 °C for 7 d. The resulting colony was predominantly cottony with gray aerial mycelium, displaying masses of pale orange conidia; on the reverse side, the colony was a pink-reddish color. Under a microscope, conidia were hyaline, fusiform to elliptic in shape, and displaying guttulate of 12.2±1.2 × 4.17±0.3 μm (n=30), characteristics coinciding with those described for Colletotrichum fioriniae (Pennycook 2017; Shivas and Tan 2009) (Supplementary Figure 1). The isolate was deposited in the Chilean Collection of Microbial Genetic Resources (CChRGM) as RGM 3330. Genomic DNA extraction of RGM 3330 and phylogenetic analyses were carried out according to Cisterna-Oyarce et al. (2022). A multi-locus sequencing analysis was carried out using five genetic markers. The internal transcribed spacer (ITS), glyceraldehyde 3-phosphate dehydrogenase (gapdh), actin (act), and chitin synthase 1 (chs-1) were PCR-amplified following Damm et al. (2012) and -tubulin (tub) following Glass and Donaldson (1995). Sequences were deposited in GenBank (ON364141 for ITS and ON369167-70 for tub, act, chs-1, and gapdh, respectively) (Sayers et al. 2021). A BLAST analysis carried out in SequenceServer (Priyam et al. 2019), using a custom database of sequences retrieved from Damm et al. (2012) and Liu et al. (2020), showed that all genetic markers were 100% identical to those of C. fioriniae CBS 128517T (ITS (540/540 identities), gapdh (249/249), act (245/245), and chs-1 (274/274)), except for tub, which shared 99.8% of its identities (416/417) with this species. Maximum likelihood phylogenetic estimation clustered RGM 3330 with C. fioriniae strains CBS 128517T and CBS 126526 with 100% bootstrap support (Supplementary Figure 1). Koch's postulates were carried out with asymptomatic fruits of V. corymbosum cv. 'Brigitta Blue'. Prior to inoculation, fruits were surface-sterilized for 10 s in 70% ethanol, 3 s in 1% NaOCl, 10 s in 70% ethanol, rinsed three times with sterile distilled water, and subsequently placed in moist-chambers. Two groups of three repetitions of 20 fruits each were sprayed with 9 × 106 conidia/mL of RGM 3330 for the first group and with sterile distilled water for the control. After 5 d at 25 °C with light/darkness cycles of 12 h, only fruits sprayed with the conidial solution developed symptoms of anthracnose and the re-isolated fungi were identical in morphology to RGM 3330. This is the first report of C. fioriniae in blueberry in Chile. References Cisterna-Oyarce, V., Carrasco-Fernández, J., Castro, J. F., Santelices, C., Muñoz-Reyes, V., Millas, P., Buddie, A. G., and France, A. 2022. Gnomoniopsis smithogilvyi: identification, characterization and incidence of the main pathogen causing brown rot in postharvest sweet chestnut fruits (Castanea sativa) in Chile. Australasian Plant Disease Notes 17:2. Damm, U., Cannon, P. F., Woudenberg, J. H., and Crous, P. W. 2012. The Colletotrichum acutatum species complex. Stud. Mycol. 73:37-113. Glass, N. L., and Donaldson, G. C. 1995. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl. Environ. Microbiol. 61:1323-1330. Lara, O., Velazquez, C. G., and Ascencio, C. 2003. Colletotrichum gloeosporiodes in blueberry fruit. in: XIII Congreso de Fitopatología. Liu, X., Zheng, X., Khaskheli, M. I., Sun, X., Chang, X., and Gong, G. 2020. Identification of Colletotrichum species associated with blueberry anthracnose in Sichuan, China. Pathogens 9:718. Pennycook, S. 2017. Colletotrichum fioriniae comb. & stat. nov., resolving a nomenclatural muddle. Mycotaxon 132:149-152. Priyam, A., Woodcroft, B. J., Rai, V., Moghul, I., Munagala, A., Ter, F., Chowdhary, H., Pieniak, I., Maynard, L. J., Gibbins, M. A., Moon, H., Davis-Richardson, A., Uludag, M., Watson-Haigh, N. S., Challis, R., Nakamura, H., Favreau, E., Gómez, E. A., Pluskal, T., Leonard, G., Rumpf, W., and Wurm, Y. 2019. Sequenceserver: a modern graphical user interface for custom BLAST databases. Mol. Biol. Evol. 36:2922-2924. Sayers, E. W., Cavanaugh, M., Clark, K., Pruitt, K. D., Schoch, C. L., Sherry, S. T., and Karsch-Mizrachi, I. 2021. GenBank. Nucleic Acids Res. 49:D92-D96. Shivas, R. G., and Tan, Y. P. 2009. A taxonomic re-assessment of Colletotrichum acutatum, introducing C. fioriniae comb. et stat. nov. and C. simmondsii sp. nov. Fungal Divers. 39:111-122. Wharton, P., and Schilder, A. 2008. Novel infection strategies of Colletotrichum acutatum on ripe blueberry fruit. Plant Pathol. 57:122-134. Supplementary material Supplementary Figure 1: Isolation and identification of Colletotrichum fioriniae RGM 3330 from blueberry fruits cv. 'Brigitta Blue' from Chile. (A) A fruit showing anthracnose; (B) colony of Colletotrichum fioriniae RGM 3330 growing on PDA; (C) microscopic observation of the conidia (100x magnification; bar=10 µm); (D) phylogenetic tree resulting from a maximum likelihood analysis of combined sequence data from ITS, act, chs-1, gapdh, and tub regions for Colletotrichum acutatum species complex, number in the nodes represent ultrafast bootstrap values.
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Affiliation(s)
- Jean Franco Castro
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Chillan, Ñuble, Chile;
| | - Paz Millas
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Av. Vicente Méndez 515, Chillan, Diguillín, Chile, 3780000;
| | | | - Jorge Carrasco
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Chillan, Chile;
| | - Cecilia Santelices
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Banco de Recursos Genéticos Microbianos, Chillan, Chile;
| | - Violeta Muñoz-Reyes
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Chillan, Chile;
| | - Matias Guerra
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Chillan, Chile;
| | - Lorena Barra-Bucarei
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Chillan, Chile;
| | - Andrés France
- Instituto de Investigaciones Agropecuarias Centro Regional Quilamapu, Chillan, Chile;
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Kolombia YA, Alakonya A, Ortega-Beltran A, Amah D, Agogbua J, Mahuku G, Swennen R. First Report of Lasiodiplodia theobromae Causing Dieback Symptoms on Plantain ( Musa AAB subgroup) in Nigeria. Plant Dis 2022; 107:943. [PMID: 35971258 DOI: 10.1094/pdis-03-22-0638-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Bananas (banana and plantains) rank sixth among staple food crops (FAO 2018), with production challenged by biotic factors, mainly fungal diseases that may cause a total loss in some orchards (Jones 2018). In April 2017, dieback symptoms (progressive blackening and necrotic aerial plant parts, leaves, fruits and peduncles) were observed on plantain (Musa AAB subgroup), in Onne, Rivers State, Nigeria (4°42'55.4012″N, 7°10'35.92128″E). Diseased plants (n=112) were either wilted with blackened necrotic areas, or dead (Fig. S1). Nearly 10% of the plants had blackened pseudostems and fruits with slate gray to black internal tissues when sliced (Fig. S1) and black, erumpent pycnidia were observed on diseased fruits. A fungal species was consistently isolated when surface disinfected pieces of diseased samples were cultured on PDA plates. Plates were incubated at 25±2°C for 4 to 15 d to observe conidia. Isolates had colonies and conidia consistent with members of the Botryosphaeriaceae family (Phillips et al. 2013). Immature conidia were single-celled, ellipsoidal and hyaline while mature conidia were two-celled, had a thick wall, a central septum, longitudinal striations, and a dark brown, cinnamon-like color. Size of mature conidia (n = 20) ranged 22.9 to 30.0 × 14.2 to 18.4 μm ( = 27.0 × 15.6 μm; Fig. S1). DNA templates of three isolates (23688-2_R16; 19144-18_R15 and PITA_22-1) were amplified using primers ITS1 and ITS4 for the ITS locus, EF1-688F and EF1-1251R for the translation elongation factor 1-α (TEF-1α) locus (Phillips et al. 2013) and sequenced (GenBank accession Nos. MZ413346, MZ413347, and MZ413348 for ITS; and MZ420177, MZ420178, and MZ420179 for TEF-1α). BLASTn query showed 100% identity with reference sequences of various isolates of Lasiodiplodia theobromae. Based on morphological characters and nucleotide homology, the isolates were identified as L. theobromae (Fig. S1 & S2). To fulfil Koch's postulates, 4-month-old plants of plantain hybrid PITA 24, and mature fruits from three genotypes (PITA 24, plantain cultivar Obino L'ewai) were inoculated with mycelial plugs from the margins of 5-d-old cultures of the three L. theobromae isolates. Pseudostems were drilled with a sterile 5 -mm cork borer, a mycelial plug placed down into the wound, covered with sterilized cotton, and sealed with parafilm. Sterile water was injected every third day to maintain moisture at the inoculated area. Toothpicks containing mycelia were used to inoculate fruits, placed in plastic Crisper boxes. Sterile PDA plugs or toothpicks were used for the controls. Inoculated plants and fruits were kept in a screenhouse at room temperature (~26°C) for 14 d. All inoculated materials developed symptoms similar to the diseased plants in the field. Control plants and fruits remained asymptomatic. L. theobromae was re-isolated from the artificially inoculated plant parts and its identity was confirmed. The fungus L. theobromae is distributed in tropical and subtropical regions and has a wide host range (Phillips et al. 2013; Mehl et al. 2017). This fungus was previously reported in grey literature as the causal agent of Musa spp. basal rot at Onne, Nigeria (Mwangi et al. 2005) but its molecular identification was not conducted; it was unknown whether the isolates were indeed L. theobromae or other cryptic species (L. pseudotheobromae or L. parva) (Alves et al. 2008). Over 15 years later, the present study confirms L. theobromae as the causal agent of basal rot of bananas based on nucleotide homology, and to our knowledge, this is the first report of L. theobromae causing dieback disease on plantain in Nigeria and in Africa. There is need to conduct a more comprehensive distribution surveys and develop appropriate control strategies in Nigeria.
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Affiliation(s)
- Yao Adjiguita Kolombia
- Ghent University Faculty of Sciences, Biology, Gent, Belgium
- International Institute of Tropical Agriculture, Ibadan, Oyo, Nigeria;
| | - Amos Alakonya
- Plantain and Banana improvement program, Oyo Road, PMB 5320, ibadan, Nigeria, Ibadan, United States, 5320;
| | - Alejandro Ortega-Beltran
- International Institute of Tropical Agriculture, PMB 5320 Oyo Road, Ibadan, Ibadan, [Select a State/Province], Nigeria, 200001;
| | - Delphine Amah
- International Institute of Tropical Agriculture, Ibadan, Oyo, Nigeria;
| | - Josephine Agogbua
- University of Port Harcourt Faculty of Sciences, Department of Plant Science and Biotechnology, Choba, Rivers State, Nigeria;
| | - George Mahuku
- International Institute of Tropical Agriculture, P.O. Box 34441, MWENGE - COCA COLA RD, P.O.Box 34441, Dar es Salaam, Dar es Salaam, Tanzania, United Republic of, 34441;
| | - Rony Swennen
- Katholieke Universiteit Leuven, Laboratory of Tropical Crop Improvement, KU Leuven, Willem De Croylaan 42, 3001 , Leuven, Flanders, Belgium
- International Institute of Tropical Agriculture, Nelson Mandela African Institution of Science and Technology, Arusha, Tanzania, United Republic of;
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Rebello CS, Baggio JS, Forcelini BB, Peres NA. Sensitivity of Colletotrichum acutatum Species Complex from Strawberry to Fungicide Alternatives to Quinone-Outside Inhibitors. Plant Dis 2022; 106:2053-2059. [PMID: 35285270 DOI: 10.1094/pdis-09-21-1934-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Colletotrichum acutatum is a species complex that causes anthracnose fruit rot and root necrosis on strawberry. The major and minor species within the complex that affect strawberry production are C. nymphaeae and C. fioriniae, respectively. The disease can significantly reduce yield under conducive weather, and its management has greatly relied on quinone-outside inhibitor fungicides (QoI). However, due to the emergence of resistant isolates, such products are no longer effective. Therefore, alternative fungicides were investigated. C. nymphaeae and C. fioriniae isolates were collected from multiple strawberry fields in the United States from 1995 to 2017. The sensitivity of benzovindiflupyr, penthiopyrad, pydiflumetofen, fluazinam, fludioxonil, and cyprodinil was assessed by in vitro and in vivo assays. Both Colletotrichum species were sensitive to benzovindiflupyr, penthiopyrad, fluazinam, and fludioxonil based on mycelial growth assays. Interestingly, of these products, only penthiopyrad did not inhibit conidial germination at 100 µg/ml. For cyprodinil, C. nymphaeae was sensitive based on the mycelial growth, whereas C. fioriniae was not inhibited. Neither species was inhibited by pydiflumetofen in mycelial growth, conidial germination, nor detached fruit assays. The prepackaged mixtures fludioxonil + cyprodinil and fludioxonil + pydiflumetofen were effective in a field trial; however, their use should be carefully considered because of the lack of efficacy of one of the compounds in the mixture. This study sheds light on the potential registration of products alternative to QoIs, such as benzovindiflupyr and fluazinam, which could improve the management of strawberry anthracnose.
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Affiliation(s)
- Carolina S Rebello
- Department of Plant Pathology, University of Florida, Gulf Coast Research and Education Center, Wimauma, FL 33598
| | - Juliana S Baggio
- Department of Plant Pathology, University of Florida, Gulf Coast Research and Education Center, Wimauma, FL 33598
- Syngenta Crop Protection, Vero Beach, FL 32967
| | - Bruna B Forcelini
- Department of Plant Pathology, University of Florida, Gulf Coast Research and Education Center, Wimauma, FL 33598
- Corteva Agriscience, Indianapolis, IN 46268
| | - Natalia A Peres
- Department of Plant Pathology, University of Florida, Gulf Coast Research and Education Center, Wimauma, FL 33598
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Rotondo F, Klass TL, Scott K, McCartney M, Jacobs JM, Lewis Ivey ML. First Report of Neopestalotiopsis Disease in Ohio caused by an emerging and novel species of Neopestalotiopsis on Strawberry. Plant Dis 2022; 107:940. [PMID: 35906777 DOI: 10.1094/pdis-02-22-0400-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
In October 2021, strawberry (Fragaria x ananassa) plants (cv. Ruby June) that had dark brown lesions with a diffuse black halo and light brown center and / or dark brown V-shaped necrotic areas often starting from the edge of the leaves were observed in a commercial planting in Washington County. The grower reported 50% incidence in the field when the sample was first submitted and two weeks later reported 80% incidence. The morphology of conidia present on symptomatic leaf tissue was consistent with species of Neopestalotiopsis (Maharachchikumbura et al. 2014). The conidia were ellipsoid to fusiform, five-celled, with three light brown colored median cells and one hyaline apical and basal cell. The apical cells had two to four flexuous appendages and the basal cell had one non-flexuous appendage. Average (N=30) conidia length, not including the appendages, and width was 24.1 ± 2.7 and 6.5 ± 1.4 µm respectively. Two isolates (MLI267-21 and MLI268-21) were purified on potato dextrose agar, producing a dense white mycelial mat with undulate margins. The underside color of the mycelial mat was pinkish-orange. Conidiomata formed randomly in the colonies and extruded black gelatinous spores. To confirm the identity of these isolates the genome of MLI267-21 was sequenced using the NextSeq 2000 Illumina platform and Nextera DNA CD indexes (OSU Applied Microbiology Service Laboratory, Columbus, OH). Partial internal transcribed spacer (ITS) region, β-tubulin (TUB), and translation elongation factor 1-alpha (TEF-1α) gene sequences (Accession numbers: OM649904, OM649905, and OM649906 respectively) were extracted from the MLI267-21 genome, concatenated, and aligned to published reference sequences. These same genes were amplified and sequenced from MLI268-21. Maximum likelihood phylogenetic analysis performed in IQ-TREE (Minh et al. 2020, Kalyaanamoorthy et al. 2017, Chernomor et al. 2016) with the aligned sequences revealed the clustering of MLI267-21 and MLI268-21 with seven other Neopestalotiopsis isolates, from strawberry (17-43L; Baggio et al. 2021) and pomegranate (GEV3426 to GEV3431; Xavier et al. 2021) leaves in Florida, which form a unique and emerging species group. The ITS, TUB, and TEF-1α sequences from both Ohio isolates were 100% similar to the same sequences from 17-43L and GEV3426 - GEV3431. Pathogenicity tests were performed using MLI267-21 by spray inoculating (~104 spore/ml) four-week-old 'Cabrillo' strawberry plants (n=4) and placing three drops (10µl each) of spore suspension (~104 spore/ml) on the calix area of detached fruit (n=4). Non-inoculated plants and fruit (n= 4 each) served as negative controls. The plants were covered with transparent plastic bags and maintained at 25 °C for 72 hours before the bags were removed (Baggio et al. 2021). Five days post-inoculation, dark brown circular spots on the leaves and petioles were observed on all four inoculated plants and acervuli were observed within the necrotic spots after an additional 72 hours in a moist chamber. Fruits were incubated in a moist chamber at 25 °C and after 72 hours orange-brown lesions formed on the fruit. After five days, fruit were mushy and covered with white mycelia, acervuli, and conidiomata. Neopestalotiopsis disease has been reported on strawberry in Florida (Baggio et al. 2021) and in several South American (Obregon et al. 2018, Hidrobo et al. 2021) and European (Chamorro et al. 2016, Gilardi et al. 2019) countries. The disease can cause rapid plant death when conditions are warm and wet. Research to investigate host susceptibility and to identify effective chemical and biological control has been initiated in Ohio to establish preventative management programs for commercial field operations.
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Affiliation(s)
- Francesca Rotondo
- The Ohio State University, Plant Pathology, 1680 Madison Ave, Wooster, Ohio, United States, 44691;
| | - Taylor L Klass
- The Ohio State University, Plant Pathology, 201 Kottman Hall, 2021 Coffey Road, Columbus, Ohio, United States, 43210
- The Ohio State University, Ohio, United States;
| | - Kelsey Scott
- The Ohio State University, Plant Pathology, Columbus, Ohio, United States;
| | - Marcus McCartney
- The Ohio State University Extension, Columbus, Ohio, United States;
| | - Jonathan Michael Jacobs
- Ohio State University, Department of Plant Pathology, 2021 Coffey Road, 201C Kottman Hall, Columbus, Ohio, United States, 43210-1132
- United States;
| | - Melanie L Lewis Ivey
- The Ohio State University, Plant Pathology, 1680 Madison Avenue, Wooster, Ohio, United States, 44691;
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Nigar Q, Cadle-Davidson L, Gadoury DM, Hassan MU. First Report of Colletotrichum fioriniae Causing Grapevine Anthracnose in New York. Plant Dis 2022; 107:223. [PMID: 35771116 DOI: 10.1094/pdis-03-22-0604-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Grapevine is one of the most widely-planted fruit crops in the world, and is the most economically important fruit crop in the state of New York, USA. Symptoms of anthracnose on grapevine are similarly widely-reported on grapevine fruit and foliage, and such symptoms are commonly attributed to Elsinöe ampelina (Wilcox et al., 2015). However, similar symptoms, if not identical, to those associated with E. ampelina have been sporadically attributed to various species in the genus Colletotrichum. In September 2021, a survey was conducted in three research vineyards at Cornell AgriTech in Geneva, NY. Symptoms of anthracnose werebserved on four Vitis interspecific hybrid breeding lines in a 1 ha vineyard. Leaves, fruit, and petioles showing symptoms of anthracnose, i.e., sunken necrotic lesions with grayish centers and brownish margins, were collected. Symptomatic and healthy portions of surface-sterilized tissues were placed on PDA medium and incubated at 23oC for 7 days. Several petiole samples yielded colonies of white to greyish mycelium, with some red to orange pigmentation (Fig. 1A and 1B), similar to those described by Chowdappa et al. (2009) for Colletotrichum species isolated from grapevine in India. Cultures were allowed to sporulate. Slides from cultures were prepared and examined at 400X magnification. Conidia from cultures were cylindrical with rounded ends, 13.5-15.2 μm in length and 7.6-9.0 μm in width (Fig. 1C). Koch's postulates were fulfilled by inoculating detached healthy leaves of V. vinifera 'Chardonnay' that had been surface sterilized in 10% sodium hypochlorite and triple-rinsed in sterile distilled water. Drop inoculation was used from a suspension of 105 conidia/ml from the foregoing pure cultures as five 2 µL droplets per leaf. Inoculated detached leaves were maintained on water agar in a Petri dish at 23oC. Four days after inoculation, symptoms were observed and compared with the originally collected samples. Inoculated leaves displayed symptoms typically found on the collected tissues, and the original pathogen, as confirmed by colony morphology and conidial characteristics and dimensions, was reisolated from inoculated leaves, and not from non-inoculated controls. For molecular characterization, fungal DNA was isolated by using Qiagen DNeasy kit and amplified using the following primer pairs: ITS1/ITS4, TEF (Hyun et al., 2009), E. ampelina F/R (Santos et al. 2018), TUB2, ACT, HIS3, GAPDH and CHS1 (Damm et al., 2001). PCR products were purified using ExoSAP-IT, and samples were Sanger sequenced. Sequences were analyzed using Geneious Prime software, and the resulting sequences (NCBI accessions OL720215, OL720216, OL720217, OL720218, OL853836, OM982612, OM982613, OM982614, OM982615 and OM982616) had 94 to 100% identity to Colletotrichum fioriniae NCBI accessions MN944922.1, MK646015.1, MN944922.1, MN856415.1, KU847413.1, MN520490.1, MN544294.1, KY695259.1, MN535117.1 and MN544295.1. Symptoms of grapevine anthracnose caused by Colletotrichum species have been reported from India (Chowdappa et al., 2009) and Korea (Kim et al., 2021). To our knowledge this is the first report of grapevine anthracnose caused by C. fioriniae Anthracnose and ripe rot are diseases of increasing importance, particularly as new grapevine cultivars with resistance to powdery mildew or downy mildew are adopted. Taxonomy of the causal agents (E. ampelina and Colletotrichum spp.) has undergone considerable revision. Consequently, distribution and relative prevalence of the various taxa will require further study.
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Affiliation(s)
- Qandeela Nigar
- Pir Mehr Ali Shah Arid Agriculture University, 72599, Department of Plant Breeding and Genetics, Rawalpindi, Punjab, Pakistan
- Cornell AgriTech, 116317, Plant Pathology and Plant Microbe Biology, Geneva, New York, United States;
| | - Lance Cadle-Davidson
- USDA Agricultural Research Service, 17123, Grape Genetics Research Unit, Geneva, New York, United States
- Cornell AgriTech, 116317, Plant Pathology and Plant Microbe Biology, Geneva, New York, United States;
| | - David M Gadoury
- Cornell AgriTech, 116317, Plant Pathology and Plant Microbe Biology, Geneva, New York, United States;
| | - Mahmood Ul Hassan
- Pir Mehr Ali Shah Arid Agriculture University, 72599, Department of Plant Breeding and Genetics, Rawalpindi, Punjab, Pakistan;
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Wang F, Saito S, Michailides TJ, Xiao CL. Fungicide Resistance in Alternaria alternata from Blueberry in California and Its Impact on Control of Alternaria Rot. Plant Dis 2022; 106:1446-1453. [PMID: 34874181 DOI: 10.1094/pdis-09-21-1971-re] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Alternaria rot caused by Alternaria alternata is one of the major postharvest diseases affecting blueberries in California. The sensitivity profiles of A. alternata from blueberry field to quinone outside inhibitors (QoIs), boscalid, fluopyram, fludioxonil, cyprodinil, and polyoxin D in California were examined in this study. EC50 values of 51 A. alternata isolates for boscalid varied greatly among the isolates, ranging from 0.265 to >100 μg/ml. EC50 values of 51 A. alternata isolates to fluopyram, fludioxonil, cyprodinil, and polyoxin D were 5.188 ± 7.118, 0.078 ± 0.021, 0.465 ± 0.302, and 6.238 ± 7.352 μg/ml, respectively. In total, 143 isolates were screened for resistance at 5 and 10 μg/ml for fludioxonil, cyprodinil, and fluopyram, 10 μg/ml for polyoxin D, and 10 and 50 μg/ml for boscalid. Based on the published discriminatory concentrations for phenotyping resistance, of the 143 isolates, all were considered resistant to boscalid; 32, 69, and 42 were sensitive, low resistant, and resistant to fluopyram, respectively; and all were sensitive to fludioxonil and cyprodinil. In a PCR-restriction fragment length polymorphism method for phenotyping, 60 out of the 143 isolates were classified as resistant to QoIs. Control tests on detached blueberry fruit inoculated with different Alternaria isolates showed that fludioxonil and cyprodinil significantly reduced disease incidence and severity; however, pyraclostrobin, boscalid, fluopyram, and polyoxin D significantly reduced only disease severity. The obtained results will be helpful in making decisions on fungicide programs to control A. alternata isolates with resistance or reduced sensitivities to multiple fungicides.
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Affiliation(s)
- Fei Wang
- United States Department of Agriculture - Agricultural Research Service (USDA-ARS), San Joaquin Valley Agricultural Sciences Center, Parlier, CA 93648
| | - Seiya Saito
- United States Department of Agriculture - Agricultural Research Service (USDA-ARS), San Joaquin Valley Agricultural Sciences Center, Parlier, CA 93648
| | - Themis J Michailides
- Department of Plant Pathology, University of California Davis, Kearney Agricultural Research and Extension Center, Parlier, CA 93648
| | - Chang-Lin Xiao
- United States Department of Agriculture - Agricultural Research Service (USDA-ARS), San Joaquin Valley Agricultural Sciences Center, Parlier, CA 93648
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Yan H, Mi Y, Sang M, Zang H, Xu J, Sun Y, Li C. First report of leaf spot disease caused by Alternaria alternata on Lonicera caerulea L. in China. Plant Dis 2022; 106:3201. [PMID: 35442055 DOI: 10.1094/pdis-12-21-2836-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Relatively few studies investigating plant diseases in blue honeysuckle (Lonicera caerulea L.) have been conducted in China. In September 2021, a leaf spot disease was observed on approximately 10% of blue honeysuckle 'Lanjingling' leaves in a 0.02 ha field plantation in Tiekuang Street (124.36°E, 40.12°N) in Dandong City, Liaoning Province, China. The main symptom consisted of leaf spots with black mildew centers typically surrounded by yellow halos. Small pieces (3-4 mm) of the infected leaves were plated onto potato dextrose agar (PDA) medium as described by Wang et al. (2020) and six purified cultures were obtained through single spore culture on PDA. The observed conidia, consistent with the morphology of Alternaria alternata, were obpyriform and dark brown, measuring 5.8 to 15.3 μm × 7.9 to 42.5 μm, with 1-6 transverse septa and 0-3 longitudinal septa (n = 50) (Simmons 2007). For molecular verification, genomic DNA was extracted from a representative isolate LD-8. The ITS (GenBank OL454815), GPD (GenBank OL601993), TEF (GenBank OL538256), RPB2 (GenBank OL601966), and Alt (GenBank OL538257) genes were partially amplified with the respective primers ITS1/ITS4 (White et al. 1990), GPD1/GPD2 (Woudenberg et al. 2015), EFl-728F/EFI-986R (Carbone and Kohn 1999), RPB2-5F2/RPB2-7CR (Liu et al. 1999), and Alt-for/Alt-rev (Hong et al. 2005). BLAST analysis revealed that these genes shared 99%-100% identity with OK345332, MK451977, MN756011, KU933459, and MN655781, respectively. A greenhouse experiment was conducted using six, healthy two-year-old blue honeysuckle 'Lanjingling' plants to observe disease development (Mirzwa-Mróz et al. 2018). After 10 d, we noted typical leaf spot symptoms on inoculated leaves sprayed with a conidial suspension (106 spores/mL) while no symptoms were detected on uninoculated leaves. The same isolate, reisolated from infected leaves with the same morphological and molecular traits, was also identified as A. alternata, confirming Koch's postulates. The fungus was previously reported in cockscomb plants in Heilongjiang Province, China (Wang et al. 2020). To our knowledge, this is the first report of leaf spot disease caused by A. alternata in blue honeysuckle grown in China. This study will provide a basis for future development of effective protection strategies against blue honeysuckle leaf spot in China.
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Affiliation(s)
- Haohao Yan
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yaozu Mi
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Mingyu Sang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Hailian Zang
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Jiatong Xu
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Yi Sun
- Northeast Agricultural UniversityHarbin, China, 150030;
| | - Chunyan Li
- Northeast Agricultural UniversityHarbin, Heilongjiang, China, 150030;
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Duan CH, Chen GY. First Report of Colletotrichum fructicola Causing Anthracnose on Indian Jujube ( Ziziphus mauritiana) in Taiwan. Plant Dis 2022; 106:PDIS06211337PDN. [PMID: 34818915 DOI: 10.1094/pdis-06-21-1337-pdn] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Affiliation(s)
- C-H Duan
- Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Taichung 41358, Taiwan
| | - G-Y Chen
- Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Taichung 41358, Taiwan
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Solano-Báez AR, Leyva-Mir SG, Camacho-Tapia M, Victoria-Arellano AD, Rodríguez-Bautista G, Sánchez-Rosas CS, Márquez-Licona G. First Report of Podosphaera aphanis Causing Powdery Mildew on Wild Blackberry Species ( Rubus Species) in Mexico. Plant Dis 2022; 106:PDIS05210932PDN. [PMID: 34282927 DOI: 10.1094/pdis-05-21-0932-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Affiliation(s)
- A R Solano-Báez
- Universidad Autónoma de Occidente, Maestría en Fitopatología y Medio Ambiente, 81217, Ahome, Sinaloa, México
| | - S G Leyva-Mir
- Universidad Autónoma Chapingo, Departamento de Parasitología Agrícola, Texcoco, 56230, Estado de México, México
| | - M Camacho-Tapia
- Universidad Autónoma Chapingo, Laboratorio Nacional de Investigación y Servicio Agroalimentario y Forestal, Texcoco, 56230, Estado de México, México
| | - A D Victoria-Arellano
- Laboratório de Interação Planta Patógeno, Faculdade de Agronomia Eliseu Maciel, Universidade Federal de Pelotas, Departamento de Fitossanidade, Pelotas, 96010-610, Rio Grande do Sul, Brazil
| | - G Rodríguez-Bautista
- Universidad de Guadalajara, Centro Universitario de la Costa Sur, Autlán, 48900, Jalisco, México
| | - C S Sánchez-Rosas
- Universidad Autónoma Chapingo, Departamento de Parasitología Agrícola, Texcoco, 56230, Estado de México, México
| | - G Márquez-Licona
- Instituto Politécnico Nacional, Centro de Desarrollo de Productos Bióticos, 62731, Yautepec, Morelos, México
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Marin MV, Peres NA. First Report of Botrytis cinerea Causing Leaf Spot on Strawberry in Florida. Plant Dis 2022; 106:1298. [PMID: 34633237 DOI: 10.1094/pdis-05-21-1082-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Affiliation(s)
- M V Marin
- University of Florida, Wimauma, FL 33598
| | - N A Peres
- University of Florida, Wimauma, FL 33598
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Olmedo Velarde A, Roy A, Larrea-Sarmiento A, Wang X, Padmanabhan C, Nunziata S, Nakhla MK, Hu J, Melzer M. First report of the hibiscus strain of citrus leprosis virus C2 infecting passionfruit (Passiflora edulis). Plant Dis 2022; 106:2539. [PMID: 35253490 DOI: 10.1094/pdis-10-21-2314-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
In Hawaii, passionfruit (Passiflora edulis; Passifloraceae) is grown primarily in residential properties and community gardens (CG). In 2019, passionfruit plants displaying chlorotic spots on young leaves, and green spots in senescing leaves were observed at two CG in Honolulu. Symptoms resembled those of passionfruit green spot virus (PfGSV) infection in Passiflora spp. (Ramos-González et al. 2020) and of the hibiscus strain of citrus leprosis virus C2 (CiLV-C2H) infection in hibiscus in Hawaii (Melzer et al. 2013). Both viruses belong to the genus Cilevirus, family Kitaviridae. Total RNA was extracted from two sample pools comprised of 40 symptomatic leaves collected from both the CG following a CTAB-based procedure (Li et al. 2008). To identify the virus associated with the P. edulis infection, reverse transcription (RT)-polymerase chain reaction (PCR) was performed using CiLV-C2 (Olmedo-Velarde et al. 2021) and PfGSV specific primers (Ramos-González et al. 2020). RT-PCR assay amplified the CiLV-C2 amplicon but failed to produce the PfGSV amplicon from infected leaves. Amplicon sequencing followed by a BLASTn search showed the nucleotide sequence had >99% identity with the CiLV-C2H-RNA1 (KC626783). A ribo-depleted RNA library created using the TruSeq Stranded Total RNA Library Prep kit (Illumina) underwent high throughput sequencing (HTS) on a NextSeq550 Illumina platform (2x75 cycles). The 6.5 million raw reads obtained were trimmed, filtered, and de novo assembled using Metaviral SPAdes v. 3.15.02 (Antipov et al. 2020). The resulting contigs were searched against an in-house database generated from GenBank virus and viroid sequences using BLASTn. This identified 12 and 3 contigs corresponding to CiLV-C2H and watermelon mosaic virus, respectively, with the latter being previously reported in passionfruit (Watanabe et al. 2016). RNA1 contigs covered 80.17% of the CiLV-C2H genome, whereas RNA2 contigs covered 94.5% with an average coverage depth of 31.660 and 57.121, respectively. To obtain the near complete genome of CiLV-C2H, gaps from the assembled HTS data were filled by overlapping RT-PCR followed by Sanger sequencing. RNA1 (8,536 nt, Acc. No. MW413437) and RNA2 (4,878 nt, MW413438) genome sequences shared 99.2% and 97.0% identity with CiLV-C2H-RNA1 (KC626783) and -RNA2 (KC626784). To further confirm the presence of CiLV-C2H in symptomatic P. edulis plants, 40 symptomatic leaf samples were individually tested by RT-PCR, and 30 samples were positive. Brevipalpus mites collected from CiLV-C2H-positive P. edulis leaves were transferred to common bean (Phaseolus vulgaris) seedlings (Garita et al. 2013). At 15-30 days post-transfer, RNA extracted from lesions observed in recipient plants tested positive for CiLV-C2H by RT-PCR. Total RNA from individual Brevipalpus mites was isolated, and cDNA was prepared to tentatively identify the mite species involved in CiLV-C2H transmission in passionfruit (Druciarek et al 2019, Olmedo-Velarde et al. 2021). CiLV-C2H was detected in individual mites, and the 28S ribosomal mite RNA sequence (MZ478051) shared 99-100% nucleotide identity with B. yothersi (MK293678 and MT812697), a vector of CiLV-C2 (Roy et al. 2013). CiLV-C2 currently has a host range limited to the families Malvaceae, Araceae, and Rutaceae (Roy et al. 2015). CiLV-C2H infects hibiscus alone and citrus in mixed infection with CiLV-C2 (Roy et al; 2018) which is responsible for causing citrus leprosis disease. Detection of CiLV-C2H in passionfruit expands the number of host families of CiLV-C2H.
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Affiliation(s)
- Alejandro Olmedo Velarde
- University of Hawaii System, 3939, Plant & Environmental Protection Sciences, 3190 Maile Way, St John 315, Honolulu, Hawaii, United States, 96822;
| | - Avijit Roy
- USDA Agricultural Research Service, 17123, Molecular Plant Pathology Laboratory, Building 004, Room 117, BARC-West, 10300 Baltimore Avenue, Washington, District of Columbia, United States, 20250;
| | - Adriana Larrea-Sarmiento
- University of Hawai'i at Manoa, 3949, PEPS, 3190 Maile Way, St John 310, Honolulu, Honolulu, Hawaii, United States, 96822-2217;
| | - Xupeng Wang
- University of Hawai'i at Manoa, 3949, Department of Plant and Environmental Protection Sciences, 3190 Maile Way, Room 310, Honolulu, Hawaii, United States, 96822
- University of Hawai'i at Manoa, 3949, Department of Plant and Environmental Protection Sciences, 3190 Maile Way, Room 310, Honolulu, Hawaii, United States, 96822;
| | - Chellappan Padmanabhan
- PPQ, CPHST, National Plant Germplasm and Biotechnology Laboratory, Laurel, Maryland, United States;
| | - Schyler Nunziata
- PPQ, CPHST, National Plant Germplasm and Biotechnology Laboratory, Laurel, Maryland, United States;
| | - Mark K Nakhla
- PPQ, CPHST, National Plant Germplasm and Biotechnology Laboratory, BARC-East, Bldg-580, Powder Mill Rd, Beltsville, Maryland, United States, 20705;
| | - John Hu
- 3190 Maile WayRm 310C310CHonolulu, Hawaii, United States, 96822
- United States;
| | - Michael Melzer
- University of Hawaii, Plant and Environmental Protection Sciences, 3190 Maile Way, St. John 310, Honolulu, Hawaii, United States, 96822;
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Chen M, Jia M, Li S, Xiao L, Wang Y, Peng W, Chen J, Xiang M. First Report of Postharvest Fruit Rot in Solanum muricatum Aiton Caused by Alternaria alternata in southwest China. Plant Dis 2022; 106:2520. [PMID: 35253487 DOI: 10.1094/pdis-01-22-0133-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Solanum muricatum is native to South America and well known for its sweet, attractive, nutritious fruits. S. muricatum has been cultivated in China since the 1980s and increasingly popular (Li et al. 2015). In November 2021, an unknown fruit rot was observed in Shilin County of Yunnan Province (24.77 °N, 103.28 °E). The incidence of this disease was about 16% of 500 postharvest S. muricatum fruits after 7 d in storage room (25°C, 90% relative humidity). The initial symptoms were small brown spots on the fruit surface, which gradually expanded into irregular brown or black lesions, and gray-white mold developed in the center of the lesions, eventually the fruit turned rot. To isolate the pathogen, ten fruits with typical symptoms were collected and surface-sterilized with 75% ethanol for 45 s. Small fragments (5 × 5 mm) from the margin of lesions on fruit were disinfected with 1% sodium hypochlorite for 60 s, washed three times with sterile water then transferred to potato dextrose agar (PDA), and incubated at 28 ± 1℃ for 3 days (Li et al. 2022). Two fungal isolates with the same morphology were obtained and purified by single-spore isolation method. The colony was covered with thick fluffy aerial mycelia and the center was dark brown or black with white margins. Conidia were brown, pyriform or ellipsoid, with 1 to 3 longitudinal and 2 to 6 transverse septa, 15.12 to 34.01 × 6.90 to 12.73 μm (21.22 × 9.69 μm on average, n=50) in size. These morphological characteristics were consistent with Alternaria alternata (Li et al. 2015; Xiang et al. 2021; Alberto. 1992). For molecular identification, genomic DNA was extracted from a representative isolate, and primers ITS1/ITS4 (Gardes et al. 1993), TEF-F/TEF-R (Lawrence et al. 2013), Alt-F/Alt-R (Hong et al. 2005), GPD-F/GPD-R (Berbee et al. 1999) and EPG-F/EPG-R (Peever et al. 2004) were used to amplify the internal transcribed spacer (ITS), translation elongation factor 1-alpha (TEF), Alternaria major allergen (Alt a1), glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and endo-polygalacturonase (endoPG), respectively. The obtained DNA sequences (ITS: OM049821; TEF: OM069656; Alt a1: OM069655; GAPDH: OM069654 and endoPG: OM069653) showed over 99% homology with that of A. alternata (GenBank Accession No. MN856355.1 (565/573 bp); MN258023.1 (267/267 bp); KY923227.1 (491/501 bp); LC131645.1 (608/609 bp) and MN698284.1 (452/454 bp)). A phylogenetic tree based on the combined ITS, TEF, Alt a1, GAPDH, and endoPG sequences using the maximum likelihood methods with Kimura 2-parameter model, bootstrap nodal support for 1000 replicates in MEGA7.0 (Li et al. 2019) revealed that the isolate was assigned to A. alternata. To confirm pathogenicity, 10 μL spore suspension (1.0 × 106 conidia/ml) obtained from 7-day-old PDA cultures of each isolate were inoculated on 15 needle-wounded and 15 non-wounded surface-disinfected fruits, respectively. Healthy fruits were inoculated with sterile water as controls and the experiment was repeated 3 times. All fruit were incubated at 25 ± 1℃, 90% relative humidity. After 7 days, all the wounded and non-wounded fruit inoculated with A. alternata showed similar symptoms to those observed on the previously fruits, while the control fruits remained healthy. The same pathogen was again isolated from the inoculated fruits, thus Koch's postulates were fulfilled. A. alternata causing fruit rot of Prunus avium and Mangifera indica in China were reported in previous studies (Ahmad et al. 2020; Liu et al. 2019). As far as we know, this is the first report of postharvest fruit rot on S. muricatum caused by A. alternata in southwest China. This work provides a basis for the development of control strategies of the disease in the future.
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Affiliation(s)
- Ming Chen
- Jiangxi Agricultural University, 91595, College of Agronomy, No.1101, Zhimin Rd, Nanchang City, Jiangxi Province, Nanchang, Jiangxi, China, 330045;
| | - Mingshu Jia
- Jiangxi Agricultural University, 91595, College of Agronomy, Nanchang, Jiangxi, China;
| | - Shucheng Li
- Jiangxi Agricultural University, 91595, College of Agronomy, Nanchang, Jiangxi, China;
| | - Liuhua Xiao
- Jiangxi Agricultural University, 91595, College of Agronomy, Nanchang, Jiangxi, China;
| | - Yinbao Wang
- Jiangxi Agricultural University, 91595, College of Agronomy, Nanchang, Jiangxi, China;
| | - Wenwen Peng
- Jiangxi Agricultural University, 91595, College of Agronomy, Nanchang, Jiangxi, China;
| | - Jinyin Chen
- Jiangxi Agricultural University, 91595, College of Agronomy, Nanchang, Jiangxi, China
- Pingxiang University, 519260, Pingxiang, Jiangxi, China;
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Zlatković N, Aleksić G, Gašić K. First Report of Bacterial Canker on Blueberry ( Vaccinium corymbosum) Caused by Pseudomonas syringae pv. syringae in Serbia. Plant Dis 2022; 106:1057. [PMID: 34491091 DOI: 10.1094/pdis-07-21-1395-pdn] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Affiliation(s)
- N Zlatković
- Institute for Plant Protection and Environment, Belgrade, Serbia
| | - G Aleksić
- Institute for Plant Protection and Environment, Belgrade, Serbia
| | - K Gašić
- Institute for Plant Protection and Environment, Belgrade, Serbia
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Cui W, Fiore N, Zamorano A. Draft Genome Sequence Resource of ' Fragaria × ananassa' Phyllody Phytoplasma Strain StrPh-CL from Chilean Strawberry. Plant Dis 2022; 106:1031-1034. [PMID: 35259302 DOI: 10.1094/pdis-09-21-1959-a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Affiliation(s)
- Weier Cui
- Department of Plant Health, Faculty of Agricultural Sciences, University of Chile, Santiago, Chile
| | - Nicola Fiore
- Department of Plant Health, Faculty of Agricultural Sciences, University of Chile, Santiago, Chile
| | - Alan Zamorano
- Department of Plant Health, Faculty of Agricultural Sciences, University of Chile, Santiago, Chile
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Marin MV, Seijo TE, Druffel K, Deng Z, Peres NA. First Report of Leaf Rust on Blackberry ( Rubus spp.) Caused by Kuehneola uredinis in Florida. Plant Dis 2022; 106:2528. [PMID: 35166560 DOI: 10.1094/pdis-11-21-2580-pdn] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
During the fall of 2020 and summer of 2021, symptoms of leaf rust were observed on blackberry plants of 'Kiowa', and breeding line 1734 (progeny of 'Natchez' and Arapaho') in a field trial at the University of Florida, Wimauma, FL. Symptoms consisted of small chlorotic spots (1 to 3 mm) on the upper side of the leaf, while the underside had yellow-orange pustules. Disease incidence was up to 100% on both 'Kiowa' and the breeding line 1734, and severity was up to 20% with most of the symptoms observed on older leaves. Two isolates were collected from 'Kiowa' and one from the breeding line 1734 for further investigation. Isolates were maintained and multiplied on healthy 'Kiowa' plants in growth chambers (25 ºC and 12-12 h photoperiod). Uredinia (n=30) were erumpent and ranged from 90 to 320 µm (Average=285 µm, SD=5.3 µm) in diameter. Urediniospores (n=50) were obovoid, yellow, and ranged from 24 to 36 μm long (Average=32 µm, SD=3.2 µm) and 22 to 30 μm wide (Average=28 µm, SD=2.5 µm). Based on morphology and literature, the pathogen was tentatively identified as Kuehneola uredinis (Link) Arth (Arthur 1906; Shands et al., 2018). Spores from a single uredinium of each isolate were collected with a needle and suspended in 50 µL of molecular biology-grade water yielding a final concentration of approximately 5 x 104 spores/mL. Two µL of each spore suspension was used for the PCR reactions. Two DNA fragments were amplified using the primers Rust2inv and LR6, and Rust18S-R and NS1 for the 5.8S-ITS2-28S gene region of rDNA (1,755 bp) and partial 18S gene region of rDNA (2,684 bp), respectively. The amplified products of the partial 28S gene region were sequenced with the primers LR3 and LR0R, and the 18S gene region with NS5, NS6, and NS4 (Aime 2006). DNA sequences were deposited in GenBank (accession nos. OK509845 - OK509848). BLASTn searches revealed that the isolates were 100% identical to K. uredinis reported causing leaf rust on blackberry in California (1044/1044bp, and 1540/1540bp for accession numbers MF158087, and MF158088, respectively). To test for pathogenicity, blackberry cultivars Kiowa, Natchez, Osage, Ouachita, Ponca, Prime-Ark® 45, Prime-Ark® Freedom, Prime-Ark® Traveler, and Prime-Ark® Horizon were inoculated. Five plants of each cultivar were inoculated with a mixture of spores of the three isolates, and two plants of each cultivar were used as controls. Spores were washed from leaves of 'Kiowa' exhibiting sporulation using a suspension of 1% Tween 20 in deionized water. The final concentration of the inoculum was adjusted to 104 spores/mL. Plants were inoculated in the greenhouse with a spray bottle until run-off and kept inside clear plastic boxes for 48 h. Controls were sprayed with sterile deionized water. Plants were watered by mists of 3 s every 10 min twice a week. Disease incidence and severity were evaluated weekly on five leaves per plant that had been tagged before inoculation. The experiment was repeated once. Symptoms identical to the original were only observed in 'Kiowa' and 'Prime-Ark® Freedom'. One week after inoculation, disease incidence was already 100% in both cultivars, with at least one pustule on all the inoculated leaves, and six weeks later disease severity was up to 50% (Average= 35%, SD=2.4%). To our knowledge, this is the first report of K. uredinis causing leaf rust on blackberry in Florida. This disease was reported on Rubus spp. in several U.S. states, and recently in California on Rubus ursinus (Farr and Rossman 2021; Shands et al. 2018). Blackberry is an emerging crop in Florida and efforts should be implemented to monitor the occurrence and spread of leaf rust considering that urediniospores disperse long distances by wind, especially if growers choose the susceptible cultivars 'Kiowa' and 'Prime-Ark Freedom'. The apparent resistance observed in other commercial cultivars such as 'Osage', 'Ouachita', and 'Ponca' may serve as valuable breeding parents for developing new blackberry cultivars with resistance to leaf rust.
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Affiliation(s)
- Marcus Vinicius Marin
- University of Florida, Plant Pathology, 14625 County Roady 672, Wimauma, Florida, United States, 33598;
| | - Teresa E Seijo
- University of Florida, GCREC, 14625 CR672, Wimauma, Florida, United States, 33598;
| | - Keri Druffel
- University of Florida, Wimauma, Florida, United States;
| | - Zhanao Deng
- University of Florida, Department of Environmental Horticulture, 14625 County Road 672, Gulf Coast Research and Education Center, Wimauma, Florida, United States, 33598
- University of Florida;
| | - Natalia A Peres
- University of Florida, GCREC, Plant Pathology, 14625 CR 672, Wimauma, Florida, United States, 33598
- United States;
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