Ocean acidification decreases the light-use efficiency in an Antarctic diatom under dynamic but not constant light

The tolerance of two marine diatoms to diurnal pH fluctuation under dynamic light condition and ocean acidification scenario

Coastal waters undergo dynamic changes in seawater carbonate chemistry due to natural and anthropogenic factors. Despite this, our current understanding of how coastal phytoplankton respond to fluctuating pH is limited. In the present study, we investigated the physiological responses of two coastal diatoms Thalassiosira pseudonana and Thalassiosira weissflogii to seawater acidification and diurnally fluctuating pH under natural solar irradiance. Seawater acidification did not significantly impact the growth, maximum and effective quantum yield of PSII, and photosynthetic rates of the two species. However, it did increase the maximum relative electron transport rate of T. weissflogii by 11%. Overall, fluctuating pH had neutral or positive effects on both species. It enhanced the light-saturated photosynthetic rate of T. weissflogii by 20% compared to cells grown under seawater acidification condition. Results from the short-term pH exposure experiment revealed that the photosynthetic rates of both species remained unaffected by acute pH changes, indicating their tolerance to varying pH. Nevertheless, it is crucial to consider dynamic pH when predicting changes in primary production in coastal waters, given the interplay of various environmental drivers.

Browning, nutrient inputs, and fast vertical mixing from simulated extreme rainfall and wind stress alter estuarine phytoplankton productivity

Browning and nutrient inputs from extreme rainfall, together with increased vertical mixing due to strong winds, are more frequent in coastal ecosystems; however, their interactive effects on phytoplankton are poorly understood. We conducted experiments to quantify how browning, together with different mixing speeds (fluctuating radiation), and a nutrient pulse alter primary productivity and photosynthetic efficiency in estuarine phytoplankton communities. Phytoplankton communities (grazers excluded) were exposed simultaneously to these drivers, and key photosynthetic targets were quantified: oxygen production, electron transport rates (ETRs), and carbon fixation immediately following collection and after a 2-d acclimation/adaptation period. Increasing mixing speeds in a turbid water column (e.g. browning) significantly decreased ETRs and carbon fixation in the short term. Acclimation/adaptation to this condition for 2 d resulted in an increase in nanoplanktonic diatoms and a community that was photosynthetically more efficient; however, this did not revert the decreasing trend in carbon fixation with increased mixing speed. The observed interactive effects (resulting from extreme rainfall and strong winds) may have profound implications in the trophodynamics of highly productive system such as the Southwest Atlantic Ocean due to changes in the size structure of the community and reduced productivity.

A story of resilience: Arctic diatom Chaetoceros gelidus exhibited high physiological plasticity to changing CO2 and light levels

Arctic phytoplankton are experiencing multifaceted stresses due to climate warming, ocean acidification, retreating sea ice, and associated changes in light availability, and that may have large ecological consequences. Multiple stressor studies on Arctic phytoplankton, particularly on the bloom-forming species, may help understand their fitness in response to future climate change, however, such studies are scarce. In the present study, a laboratory experiment was conducted on the bloom-forming Arctic diatom Chaetoceros gelidus (earlier C. socialis) under variable CO₂ (240 and 900 µatm) and light (50 and 100 µmol photons m^-2 s^-1) levels. The growth response was documented using the pre-acclimatized culture at 2°C in a closed batch system over 12 days until the dissolved inorganic nitrogen was depleted. Particulate organic carbon and nitrogen (POC and PON), pigments, cell density, and the maximum quantum yield of photosystem II (Fv/Fm) were measured on day 4 (D₄), 6 (D₆), 10 (D₁₀), and 12 (D₁₂). The overall growth response suggested that C. gelidus maintained a steady-state carboxylation rate with subsequent conversion to macromolecules as reflected in the per-cell POC contents under variable CO₂ and light levels. A substantial amount of POC buildup at the low CO₂ level (comparable to the high CO₂ treatment) indicated the possibility of existing carbon dioxide concentration mechanisms (CCMs) that needs further investigation. Pigment signatures revealed a high level of adaptability to variable irradiance in this species without any major CO₂ effect. PON contents per cell increased initially but decreased irrespective of CO₂ levels when nitrogen was limited (D₆ onward) possibly to recycle intracellular nitrogen resources resulting in enhanced C: N ratios. On D₁₂ the decreased dissolved organic nitrogen levels could be attributed to consumption under nitrogen starvation. Such physiological plasticity could make C. gelidus "ecologically resilient" in the future Arctic.

Synergistic promoting effect of increasing aquatic ammonium and CO2 on Microcystis aeruginosa

Owing to climate change and intensive agricultural development, freshwater bodies have been affected by increases in both CO₂ levels and chemically-reduced forms of N. However, little is known about how these changes affect cyanobacterial growth and blooms. This study explored a range of light conditions (30, 80, 130, or 200 μmol photons/m²/s) wherein Microcystis aeruginosa, a widespread bloom-forming species, was exposed to different concentrations of CO₂ (400 parts per million (ppm) and 1000 ppm) in a medium containing NH₄⁺ or NO₃－. The interactive effects of N sources and CO₂ levels on the C/N metabolic balance and energy balance were examined to assess changes in the growth of M. aeruginosa. When the light intensity was 80 μmol photons/m²/s, elevated CO₂ could reduce intracellular reactive oxygen species (ROS) in NH₄⁺-grown M. aeruginosa. Meanwhile, cell density and chlorophyll a (Chl a) increased with increasing CO₂ levels, and the increase in Chl a was significantly greater in NH₄⁺-grown M. aeruginosa than in NO₃－-grown M. aeruginosa. Under light conditions of 200 μmol photons/m²/s, elevated CO₂ concentration caused NO₃－-grown M. aeruginosa to be affected by a large amount of ROS, and the growth of NO₃－-grown M. aeruginosa was finally suppressed. However, NH₄⁺-grown M. aeruginosa had a smaller amount of ROS and showed improved growth as CO₂ was elevated. This difference can be attributed to the faster metabolic pathways in the NH₄⁺ environment, which manifested in a lower accumulation of 2-oxoglutarate and fatty acids as CO₂ was elevated. These findings suggest that the simultaneous increase in ammonium and CO₂ in aquatic ecosystems confers cyanobacteria with greater advantages than the combination of nitrate and CO₂, which may aggravate cyanobacterial blooms.

Exploring Variability of Trichodesmium Photophysiology Using Multi-Excitation Wavelength Fast Repetition Rate Fluorometry

Fast repetition rate fluorometry (FRRf) allows for rapid non-destructive assessment of phytoplankton photophysiology in situ yet has rarely been applied to Trichodesmium. This gap reflects long-standing concerns that Trichodesmium (and other cyanobacteria) contain pigments that are less effective at absorbing blue light which is often used as the sole excitation source in FRR fluorometers-potentially leading to underestimation of key fluorescence parameters. In this study, we use a multi-excitation FRR fluorometer (equipped with blue, green, and orange LEDs) to investigate photophysiological variability in Trichodesmium assemblages from two sites. Using a multi-LED measurement protocol (447+519+634 nm combined), we assessed maximum photochemical efficiency (F v /F m ), functional absorption cross section of PSII (σ PSII ), and electron transport rates (ETRs) for Trichodesmium assemblages in both the Northwest Pacific (NWP) and North Indian Ocean in the vicinity of Sri Lanka (NIO-SL). Evaluating fluorometer performance, we showed that use of a multi-LED measuring protocol yields a significant increase of F v /F m for Trichodesmium compared to blue-only excitation. We found distinct photophysiological differences for Trichodesmium at both locations with higher average F v /F m as well as lower σ PSII and non-photochemical quenching (NPQ NSV ) observed in the NWP compared to the NIO-SL (Kruskal-Wallis t-test df = 1, p < 0.05). Fluorescence light response curves (FLCs) further revealed differences in ETR response with a lower initial slope (α ETR ) and higher maximum electron turnover rate ( E T R P S I I m a x ) observed for Trichodesmium in the NWP compared to the NIO-SL, translating to a higher averaged light saturation E K (= E T R P S I I m a x /α ETR ) for cells at this location. Spatial variations in physiological parameters were both observed between and within regions, likely linked to nutrient supply and physiological stress. Finally, we applied an algorithm to estimate primary productivity of Trichodesmium using FRRf-derived fluorescence parameters, yielding an estimated carbon-fixation rate ranging from 7.8 to 21.1 mgC mg Chl-a-1 h-1 across this dataset. Overall, our findings demonstrate that capacity of multi-excitation FRRf to advance the application of Chl-a fluorescence techniques in phytoplankton assemblages dominated by cyanobacteria and reveals novel insight into environmental regulation of photoacclimation in natural Trichodesmium populations.

Ocean acidification alters the nutritional value of Antarctic diatoms

Primary production in the Southern Ocean is dominated by diatom-rich phytoplankton assemblages, whose individual physiological characteristics and community composition are strongly shaped by the environment, yet knowledge on how diatoms allocate cellular energy in response to ocean acidification (OA) is limited. Understanding such changes in allocation is integral to determining the nutritional quality of diatoms and the subsequent impacts on the trophic transfer of energy and nutrients. Using synchrotron-based Fourier transform infrared microspectroscopy, we analysed the macromolecular content of selected individual diatom taxa from a natural Antarctic phytoplankton community exposed to a gradient of fCO₂ levels (288-1263 µatm). Strong species-specific differences in macromolecular partitioning were observed under OA. Large taxa showed preferential energy allocation towards proteins, while smaller taxa increased both lipid and protein stores at high fCO₂ . If these changes are representative of future Antarctic diatom physiology, we may expect a shift away from lipid-rich large diatoms towards a community dominated by smaller taxa, but with higher lipid and protein stores than their present-day contemporaries, a response that could have cascading effects on food web dynamics in the Antarctic marine ecosystem.

Enhancement of diatom growth and phytoplankton productivity with reduced O2 availability is moderated by rising CO2

Many marine organisms are exposed to decreasing O₂ levels due to warming-induced expansion of hypoxic zones and ocean deoxygenation (DeO₂). Nevertheless, effects of DeO₂ on phytoplankton have been neglected due to technical bottlenecks on examining O₂ effects on O₂-producing organisms. Here we show that lowered O₂ levels increased primary productivity of a coastal phytoplankton assemblage, and enhanced photosynthesis and growth in the coastal diatom Thalassiosira weissflogii. Mechanistically, reduced O₂ suppressed mitochondrial respiration and photorespiration of T. weissflogii, but increased the efficiency of their CO₂ concentrating mechanisms (CCMs), effective quantum yield and improved light use efficiency, which was apparent under both ambient and elevated CO₂ concentrations leading to ocean acidification (OA). While the elevated CO₂ treatment partially counteracted the effect of low O₂ in terms of CCMs activity, reduced levels of O₂ still strongly enhanced phytoplankton primary productivity. This implies that decreased availability of O₂ with progressive DeO₂ could boost re-oxygenation by diatom-dominated phytoplankton communities, especially in hypoxic areas, with potentially profound consequences for marine ecosystem services in coastal and pelagic oceans.

Sun et al. investigate the effects of current ambient and potential future oxygen levels on phytoplankton growth and photosynthesis with field observations and mesocosm and lab experiments. Their results demonstrate positive effects of low O₂ on phytoplankton growth, photosynthesis, and inorganic carbon acquisition at current and future high levels of CO₂.

Development of photosynthetic carbon fixation model using multi-excitation wavelength fast repetition rate fluorometry in Lake Biwa

Direct measurements of gross primary productivity (GPP) in the water column are essential, but can be spatially and temporally restrictive. Fast repetition rate fluorometry (FRRf) is a bio-optical technique based on chlorophyll a (Chl-a) fluorescence that can estimate the electron transport rate (ETR_PSII) at photosystem II (PSII) of phytoplankton in real time. However, the derivation of phytoplankton GPP in carbon units from ETR_PSII remains challenging because the electron requirement for carbon fixation (Ф_e,C), which is mechanistically 4 mol e⁻ mol C⁻¹ or above, can vary depending on multiple factors. In addition, FRRf studies are limited in freshwater lakes where phosphorus limitation and cyanobacterial blooms are common. The goal of the present study is to construct a robust Ф_e,C model for freshwater ecosystems using simultaneous measurements of ETR_PSII by FRRf with multi-excitation wavelengths coupled with a traditional carbon fixation rate by the ¹³C method. The study was conducted in oligotrophic and mesotrophic parts of Lake Biwa from July 2018 to May 2019. The combination of excitation light at 444, 512 and 633 nm correctly estimated ETR_PSII of cyanobacteria. The apparent range of Ф_e,C in the phytoplankton community was 1.1–31.0 mol e⁻ mol C⁻¹ during the study period. A generalised linear model showed that the best fit including 12 physicochemical and biological factors explained 67% of the variance in Ф_e,C. Among all factors, water temperature was the most significant, while photosynthetically active radiation intensity was not. This study quantifies the in situ FRRf method in a freshwater ecosystem, discusses core issues in the methodology to calculate Ф_e,C, and assesses the applicability of the method for lake GPP prediction.

Taxonomic Variability in the Electron Requirement for Carbon Fixation Across Marine Phytoplankton

Fast Repetition Rate fluorometry (FRRf) has been increasingly used to measure marine primary productivity by oceanographers to understand how carbon (C) uptake patterns vary over space and time in the global ocean. As FRRf measures electron transport rates through photosystem II (ETR_PSII ), a critical, but difficult to predict conversion factor termed the "electron requirement for carbon fixation" (Φ_e,C ) is needed to scale ETR_PSII to C-fixation rates. Recent studies have generally focused on understanding environmental regulation of Φ_e,C , while taxonomic control has been explored by only a handful of laboratory studies encompassing a limited diversity of phytoplankton species. We therefore assessed Φ_e,C for a wide range of marine phytoplankton (n = 17 strains) spanning multiple taxonomic and size classes. Data mined from previous studies were further considered to determine whether Φ_e,C variability could be explained by taxonomy versus other phenotypic traits influencing growth and physiological performance (e.g., cell size). We found that Φ_e,C exhibited considerable variability (~4-10 mol e^-  · [mol C]^-1 ) and was negatively correlated with growth rate (R²  = 0.7, P < 0.01). Diatoms exhibited a lower Φ_e,C compared to chlorophytes during steady-state, nutrient-replete growth. Inclusion of meta-analysis data did not find significant relationships between Φ_e,C and class, or growth rate, although confounding factors inherent to methodological inconsistencies between studies likely contributed to this. Knowledge of empirical relationships between Φ_e,C and growth rate coupled with recent improvements in quantifying phytoplankton growth rates in situ, facilitate up-scaling of FRRf campaigns to routinely derive Φ_e,C needed to assess ocean C-cycling.

Effects of rising atmospheric CO2 levels on physiological response of cyanobacteria and cyanobacterial bloom development: A review

Increasing atmospheric CO₂ concentration negatively impacts aquatic ecosystems and may exacerbate the problem of undesirable cyanobacterial bloom development in freshwater ecosystems. Elevated levels of atmospheric CO₂ may increase the levels of dissolved CO₂ in freshwater systems, via air-water exchanges, enhancing primary production in the water and catchments. Although high CO₂ levels improve cyanobacterial growth and increase cyanobacterial biomass, the impacts on their internal physiological processes can be more complex. Here, we have reviewed previous studies to evaluate the physiological responses of cyanobacteria to high concentrations of CO₂. In response to high CO₂ concentrations, the pressures of inorganic carbon absorption are reduced, and carbon concentration mechanisms are downregulated, affecting the intracellular metabolic processes and competitiveness of the cyanobacteria. Nitrogen and phosphorus metabolism and light utilization are closely related to CO₂ assimilation, and these processes are likely to be affected by resource and energy reallocation when CO₂ levels are high. Additionally, the responses of diazotrophic and toxic cyanobacteria to elevated CO₂ levels were specifically reviewed. The responses of diazotrophic cyanobacteria to elevated CO₂ concentrations were found to be inconsistent, probably because of differences in other factors in experimental designs. Toxic cyanobacteria tended to be superior to non-toxic strains at low levels of CO₂; however, the specific effects of microcystin on the regulation require further investigation. Furthermore, the effects of increasing CO₂ levels on cyanobacterial competitiveness in phytoplankton communities and nutrient cycling in aquatic ecosystems were reviewed. High CO₂ concentrations may make cyanobacteria less competitive relative to other algal taxa; however, due to the complexity of natural systems and the specificity of algal species, the dominant positions of the cyanobacteria do not seems to be changed. To better understand cyanobacterial responses to elevated CO₂ levels and help control cyanobacterial bloom developments, this review has identified key areas for future research.

Ocean acidification interacts with growth light to suppress CO2 acquisition efficiency and enhance mitochondrial respiration in a coastal diatom

Diatom responses to ocean acidification have been documented with variable and controversial results. We grew the coastal diatom Thalassiosira weissflogii under 410 (LC, pH 8.13) vs 1000 μatm (HC, pH 7.83) pCO₂ and at different levels of light (80, 140, 220 μmol photons m^-2 s^-1), and found that light level alters physiological responses to OA. CO₂ concentrating mechanisms (CCMs) were down-regulated in the HC-grown cells across all the light levels, as reflected by lowered activity of the periplasmic carbonic anhydrase and decreased photosynthetic affinity for CO₂ or dissolved inorganic carbon. The specific growth rate was, however, enhanced significantly by 9.2% only at the limiting low light level. These results indicate that rather than CO₂ "fertilization", the energy saved from down-regulation of CCMs promoted the growth rate of the diatom when light availability is low, in parallel with enhanced respiration under OA to cope with the acidic stress by providing extra energy.

Meta-analysis of multiple driver effects on marine phytoplankton highlights modulating role of pCO2

Responses of marine primary production to a changing climate are determined by a concert of multiple environmental changes, for example in temperature, light, pCO₂ , nutrients, and grazing. To make robust projections of future global marine primary production, it is crucial to understand multiple driver effects on phytoplankton. This meta-analysis quantifies individual and interactive effects of dual driver combinations on marine phytoplankton growth rates. Almost 50% of the single-species laboratory studies were excluded because central data and metadata (growth rates, carbonate system, experimental treatments) were insufficiently reported. The remaining data (42 studies) allowed for the analysis of interactions of pCO₂ with temperature, light, and nutrients, respectively. Growth rates mostly respond non-additively, whereby the interaction with increased pCO₂ profusely dampens growth-enhancing effects of high temperature and high light. Multiple and single driver effects on coccolithophores differ from other phytoplankton groups, especially in their high sensitivity to increasing pCO₂ . Polar species decrease their growth rate in response to high pCO₂ , while temperate and tropical species benefit under these conditions. Based on the observed interactions and projected changes, we anticipate primary productivity to: (a) first increase but eventually decrease in the Arctic Ocean once nutrient limitation outweighs the benefits of higher light availability; (b) decrease in the tropics and mid-latitudes due to intensifying nutrient limitation, possibly amplified by elevated pCO₂ ; and (c) increase in the Southern Ocean in view of higher nutrient availability and synergistic interaction with increasing pCO₂ . Growth-enhancing effect of high light and warming to coccolithophores, mainly Emiliania huxleyi, might increase their relative abundance as long as not offset by acidification. Dinoflagellates are expected to increase their relative abundance due to their positive growth response to increasing pCO₂ and light levels. Our analysis reveals gaps in the knowledge on multiple driver responses and provides recommendations for future work on phytoplankton.

Elevated CO2 concentration alleviates UVR-induced inhibition of photosynthetic light reactions and growth in an intertidal red macroalga

The commercially important red macroalga Pyropia (formerly Porphyra) yezoensis is, in its natural intertidal environment, subjected to high levels of both photosynthetically active and ultraviolet radiation (PAR and UVR, respectively). In the present work, we investigated the effects of a plausibly increased global CO₂ concentration on quantum yields of photosystems II (PSII) and I (PSI), as well as photosynthetic and growth rates of P. yezoensis grown under natural solar irradiance regimes with or without the presence of UV-A and/or UV-B. Our results showed that the high-CO₂ treatment (~1000 μbar, which also caused a drop of 0.3 pH units in the seawater) significantly increased both CO₂ assimilation rates (by 35%) and growth (by 18%), as compared with ambient air of ~400 μbar CO₂. The inhibition of growth by UV-A (by 26%) was reduced to 15% by high-CO₂ concentration, while the inhibition by UV-B remained at ~6% under both CO₂ concentrations. Homologous results were also found for the maximal relative photosynthetic electron transport rates (rETR_max), the maximum quantum yield of PSII (F_v/F_m), as well as the midday decrease in effective quantum yield of PSII (YII) and concomitant increased non-photochemical quenching (NPQ). A two-way ANOVA analysis showed an interaction between CO₂ concentration and irradiance quality, reflecting that UVR-induced inhibition of both growth and YII were alleviated under the high-CO₂ treatment. Contrary to PSII, the effective quantum yield of PSI (YI) showed higher values under high-CO₂ condition, and was not significantly affected by the presence of UVR, indicating that it was well protected from this radiation. Both the elevated CO₂ concentration and presence of UVR significantly induced UV-absorbing compounds. These results suggest that future increasing CO₂ conditions will be beneficial for photosynthesis and growth of P. yezoensis even if UVR should remain at high levels.

Rising atmospheric CO2 levels result in an earlier cyanobacterial bloom-maintenance phase with higher algal biomass

The effect of rising atmospheric CO₂ on freshwater lakes is a subject of considerable debate. However, it is not clear how rising CO₂ concentration affects cyanobacterial bloom development under potential nutrient limitation conditions and if CO₂ should be taken into account in making nutrient reduction strategy. To fill the knowledge gaps, this study investigated the spatiotemporal variability in aquatic CO₂ concentration (pCO₂) from 2006 to 2016 in Lake Taihu, where cyanobacterial blooms often occurred from late spring to the early fall. Lake Taihu is an atmospheric CO₂ source in May and November, with only 18% and 11% pCO₂-undersaturated areas, respectively. During cyanobacterial bloom in August, 81% of the lake areas are pCO₂-undersaturated, absorbing ~ 0.53 t C/h of atmospheric CO₂. The results demonstrated that CO₂ transfer across air-water interface was important in supporting cyanobacterial bloom development. Besides, Field investigation showed that the chlorophyll a level is significantly positively correlated with supersaturated pCO₂ (>13.56 µmol/L) in May, but pCO₂ decreases with high chlorophyll a levels in August, suggesting that cyanobacterial growth would be promoted by high pCO₂ over a threshold. These observations suggested that the effect of rising atmospheric CO₂ on freshwater lakes and cyanobacterial blooms should be paid attention to. Further, when the N- and P-levels are >0.3 mg/L and >0.02 mg/L, respectively, high-pCO₂ conditions allow a more rapid growth rate of cyanobacteria via improved nutrient-use efficiency. Moreover, cyanobacteria afford maximum N- or P-use efficiency at lower N- or P-concentrations with high CO₂ concentration. This improvement would result in an earlier bloom-maintenance phase and higher cyanobacterial biomass. In this case, nutrient reduction is more imperative under future high CO₂ conditions.

Ocean acidification interacts with variable light to decrease growth but increase particulate organic nitrogen production in a diatom

Phytoplankton in the upper oceans are exposed to changing light levels due to mixing, diurnal solar cycles and weather conditions. Consequently, effects of ocean acidification are superimposed upon responses to variable light levels. We therefore grew a model diatom Thalassiosira pseudonana under either constant or variable light but at the same daily photon dose, with current low (400 μatm, LC) and future high CO₂ (1000 μatm, HC) treatments. Variable light, compared with the constant light regime, decreased the growth rate, Chl a, Chl c, and carotenoid contents under both LC and HC conditions. Cells grown under variable light appeared more tolerant of high light as indicated by higher maximum relative electron transport rate and saturation light. Light variation interacted with high CO₂/lowered pH to decrease the carbon fixation rate, but increased particulate organic carbon (POC) and particularly nitrogen (PON) per cell, which drove a decrease in C/N ratio, reflecting changes in the efficiency of energy transfer from photo-chemistry to net biomass production. Our results imply that elevated pCO₂ under varying light conditions can lead to less primary productivity but more PON per biomass of the diatom, which might improve the food quality of diatoms and thereby influence biogeochemical nitrogen cycles.

Physiological and Ecological Responses of Photosynthetic Processes to Oceanic Properties and Phytoplankton Communities in the Oligotrophic Western Pacific Ocean

Understanding the dynamics of primary productivity in a rapidly changing marine environment requires mechanistic insight into the photosynthetic processes (light absorption characteristics and electron transport) in response to the variability of environmental conditions and algal species. Here, we examined the photosynthetic performance and related physiological and ecological responses to oceanic properties [temperature, salinity, light, size-fractionated chlorophyll a (Chl a) and nutrients] and phytoplankton communities in the oligotrophic Western Pacific Ocean (WPO). Our results revealed high variability in the maximum (F_v/F_m; 0.08–0.26) and effective (F_q′/F_m′; 0.02–0.22) photochemical efficiency, the efficiency of charge separation (F_q′/F_v′; 0.19–1.06), the photosynthetic electron transfer rates (ETR_RCII; 0.02–5.89 mol e^– mol RCII^–1 s^–1) and the maximum of primary production [PP_max; 0.04–8.59 mg C (mg chl a)^–1 h^–1]. All these photosynthetic characteristics showed a depth-specific dependency based on respective nonlinear regression models. On physiological scales, variability in light absorption parameters F_v/F_m and F_q′/F_m′ notably correlated with light availability and size-fractionated Chl a, while both ETR_RCII and PP_max were correlated to temperature, light, and ambient nutrient concentration. Since the presence of nonphotochemical quenching (NPQ_NSV; 2.33–12.31) and increasing reductant are used for functions other than carbon fixation, we observed nonparallel changes in the ETR_RCII and F_v/F_m, F_q′/F_m′, F_q′/F_v′. In addition, we found that the important biotic variables influencing F_v/F_m were diatoms (cells > 2 μm), picosized Prochlorococcus, and eukaryotes, but the PP_max was closely related to large cyanobacteria (cells > 2 μm), dinoflagellates, and picosized Synechococcus. The implication is that, on ecological scales, an interaction among temperature, light, and nutrient availability may be key in driving the dynamics of primary productivity in the WPO, while large cyanobacteria, dinoflagellates, and picosized Synechococcus may have a high contribution to the primary production. Overall, the photosynthetic processes are interactively affected by complex abiotic and biotic variables in marine ecosystems, rather than by a single variable.

Higher sensitivity towards light stress and ocean acidification in an Arctic sea-ice-associated diatom compared to a pelagic diatom

Thalassiosira hyalina and Nitzschia frigida are important members of Arctic pelagic and sympagic (sea-ice-associated) diatom communities. We investigated the effects of light stress (shift from 20 to 380 µmol photons m^-2  s^-1 , resembling upwelling or ice break-up) under contemporary and future pCO₂ (400 vs 1000 µatm). The responses in growth, elemental composition, pigmentation and photophysiology were followed over 120 h and are discussed together with underlying gene expression patterns. Stress response and subsequent re-acclimation were efficiently facilitated by T. hyalina, which showed only moderate changes in photophysiology and elemental composition, and thrived under high light after 120 h. In N. frigida, photochemical damage and oxidative stress appeared to outweigh cellular defenses, causing dysfunctional photophysiology and reduced growth. pCO₂ alone did not specifically influence gene expression, but amplified the transcriptomic reactions to light stress, indicating that pCO₂ affects metabolic equilibria rather than sensitive genes. Large differences in acclimation capacities towards high light and high pCO₂ between T. hyalina and N. frigida indicate species-specific mechanisms in coping with the two stressors, which may reflect their respective ecological niches. This could potentially alter the balance between sympagic and pelagic primary production in a future Arctic.

Company matters: The presence of other genotypes alters traits and intraspecific selection in an Arctic diatom under climate change

Arctic phytoplankton and their response to future conditions shape one of the most rapidly changing ecosystems on the planet. We tested how much the phenotypic responses of strains from the same Arctic diatom population diverge and whether the physiology and intraspecific composition of multistrain populations differs from expectations based on single strain traits. To this end, we conducted incubation experiments with the diatom Thalassiosira hyalina under present-day and future temperature and pCO2 treatments. Six fresh isolates from the same Svalbard population were incubated as mono- and multistrain cultures. For the first time, we were able to closely follow intraspecific selection within an artificial population using microsatellites and allele-specific quantitative PCR. Our results showed not only that there is substantial variation in how strains of the same species cope with the tested environments but also that changes in genotype composition, production rates, and cellular quotas in the multistrain cultures are not predictable from monoculture performance. Nevertheless, the physiological responses as well as strain composition of the artificial populations were highly reproducible within each environment. Interestingly, we only detected significant strain sorting in those populations exposed to the future treatment. This study illustrates that the genetic composition of populations can change on very short timescales through selection from the intraspecific standing stock, indicating the potential for rapid population level adaptation to climate change. We further show that individuals adjust their phenotype not only in response to their physicochemical but also to their biological surroundings. Such intraspecific interactions need to be understood in order to realistically predict ecosystem responses to global change.

Fast Repetition Rate Fluorometry (FRRF) Derived Phytoplankton Primary Productivity in the Bay of Bengal

The approach of fast repetition rate fluorometry (FRRF) requires a conversion factor (Φ_{e : C}/n _PSII) to derive ecologically-relevant carbon uptake rates (PP _z,t). However, the required Φ_{e : C}/n _PSII is commonly measured by ¹⁴C assimilation and varies greatly across phytoplankton taxonomy and environmental conditions. Consequently, the use of FRRF to estimate gross primary productivity (GP _z,t), alone or in combination with other approaches, has been restricted by both inherent conversion and procedural inconsistencies. Within this study, based on a hypothesis that the non-photochemical quenching (NPQ_NSV) can be used as a proxy for the variability and magnitude of Φ_{e : C}/n _PSII, we thus proposed an independent field model coupling with the NPQ_NSV-based Φ_{e : C}/n _PSII for FRRF-derived carbon, without the need for additional Φ_{e : C}/n _PSII in the Bay of Bengal (BOB). Therewith, this robust algorithm was verified by the parallel measures of electron transport rates and ¹⁴C-uptake PP _z,t. NPQ_NSV is theoretically caused by the effects of excess irradiance pressure, however, it showed a light and depth-independent response on large spatial scales of the BOB. Trends observed for the maximum quantum efficiency (F_v/F_m), the quantum efficiency of energy conversion ( F q ' / F m ' ) and the efficiency of charge separation ( F q ' / F v ' ) were similar and representative, which displayed a relative maximum at the subsurface and were collectively limited by excess irradiance. In particular, most observed values of F_v/F_m in the BOB were only about half of the values expected for nutrient replete phytoplankton. FRRF-based estimates of electron transport at PSII (ETR_RCII) varied significantly, from 0.01 to 8.01 mol e^- mol RCII^-1 s^-1, and showed profound responses to depth and irradiance across the BOB, but fitting with the logistic model. N, P, and irradiance are key environmental drivers in explaining the broad-scale variability of photosynthetic parameters. Furthermore, taxonomic shifts and physiological changes may be better predictors of photosynthetic parameters, and facilitate the selection of better adapted species to optimize photosynthetic efficiency under any particular set of ambient light condition.

Insensitivities of a subtropical productive coastal plankton community and trophic transfer to ocean acidification: Results from a microcosm study

Ocean acidification (OA) has potential to affect marine phytoplankton in ways that are partly understood, but there is less knowledge about how it may alter the coupling to secondary producers. We investigated the effects of OA on phytoplankton primary production, and its trophic transfer to zooplankton in a subtropical eutrophic water (Wuyuan Bay, China) under present day (400 μatm) and projected end-of-century (1000 μatm) pCO₂ levels. Net primary production was unaffected, although OA did lead to small decreases in growth rates. OA had no measurable effect on micro-/mesozooplankton grazing rates. Elevated pCO₂ had no effect on phytoplankton fatty acid (FA) concentrations during exponential phase, but saturated FAs increased relative to the control during declining phase. FA profiles of mesozooplankton were unaffected. Our findings show that short-term exposure of plankton communities in eutrophic subtropical waters to projected end-of-century OA conditions has little effect on primary productivity and trophic linkage to mesozooplankton.

Size scaling of photophysiology and growth in four freshly isolated diatom species from Ryder Bay, western Antarctic peninsula

Diatoms are one of the dominant groups in phytoplankton communities of the western Antarctic Peninsula (WAP). Although generally well-studied, little is known about size dependent photophysiological responses in diatom bloom formation and succession. To increase this understanding, four Antarctic diatom species covering two orders of magnitude in cell size were isolated in northern Marguerite Bay (WAP). Fragilariopsis sp., Pseudo-nitzschia cf. subcurvata, Thalassiosira cf. antarctica, and Proboscia cf. alata were acclimated to three different irradiances after which photophysiology, electron transport, carbon fixation, and growth were assessed. The small species Fragilariopsis sp., Pseudo-nitzschia cf. subcurvata, and large species Proboscia cf. alata showed similar photoacclimation to higher irradiances with a decrease in cellular chlorophyll a and an increase in chlorophyll a specific absorption and xanthophyll cycle pigments and activity. In contrast, pigment concentrations and absorption remained unaffected by higher irradiances in the large species Thalassiosira cf. antarctica. Overall, the small species showed significantly higher growth rates compared to the large species, which was related to relatively high light harvesting capacity and electron transport rates in the smaller species. However, photophysiological responses related to photoinhibition and photoprotection and carbon fixation showed no relationship with cell size. This study supports the dominance of small diatoms at low irradiances during winter and early spring, but does not provide photophysiological evidence for the dominance of large diatoms during the phytoplankton bloom in the WAP. This suggests that other factors such as grazing and nutrient availability are likely to play a major role in diatom bloom formation.

In-situ behavioural and physiological responses of Antarctic microphytobenthos to ocean acidification

Ocean acidification (OA) is predicted to alter benthic marine community structure and function, however, there is a paucity of field experiments in benthic soft sediment communities and ecosystems. Benthic diatoms are important components of Antarctic coastal ecosystems, however very little is known of how they will respond to ocean acidification. Ocean acidification conditions were maintained by incremental computer controlled addition of high fCO₂ seawater representing OA conditions predicted for the year 2100. Respiration chambers and PAM fluorescence techniques were used to investigate acute behavioural, photosynthetic and net production responses of benthic microalgae communities to OA in in-situ field experiments. We demonstrate how OA can modify behavioural ecology, which changes photo-physiology and net production of benthic microalgae. Ocean acidification treatments significantly altered behavioural ecology, which in turn altered photo-physiology. The ecological trends presented here have the potential to manifest into significant ecological change over longer time periods.

Roadmaps and Detours: Active Chlorophyll- a Assessments of Primary Productivity Across Marine and Freshwater Systems

Assessing phytoplankton productivity over space and time remains a core goal for oceanographers and limnologists. Fast Repetition Rate fluorometry (FRRf) provides a potential means to realize this goal with unprecedented resolution and scale yet has not become the "go-to" method despite high expectations. A major obstacle is difficulty converting electron transfer rates to equivalent rates of C-fixation most relevant for studies of biogeochemical C-fluxes. Such difficulty stems from methodological inconsistencies and our limited understanding of how the electron requirement for C-fixation (Φ_e,C) is influenced by the environment and by differences in the composition and physiology of phytoplankton assemblages. We outline a "roadmap" for limiting methodological bias and to develop a more mechanistic understanding of the ecophysiology underlying Φ_e,C. We 1) re-evaluate core physiological processes governing how microalgae invest photosynthetic electron transport-derived energy and reductant into stored carbon versus alternative sinks. Then, we 2) outline steps to facilitate broader uptake and exploitation of FRRf, which could transform our knowledge of aquatic primary productivity. We argue it is time to 3) revise our historic methodological focus on carbon as the currency of choice, to 4) better appreciate that electron transport fundamentally drives ecosystem biogeochemistry, modulates cell-to-cell interactions, and ultimately modifies community biomass and structure.

Ocean acidification stimulates particulate organic carbon accumulation in two Antarctic diatom species under moderate and high natural solar radiation

Impacts of rising atmospheric CO2 concentrations and increased daily irradiances from enhanced surface water stratification on phytoplankton physiology in the coastal Southern Ocean remain still unclear. Therefore, in the two Antarctic diatoms Fragilariopsis curta and Odontella weissflogii, the effects of moderate and high natural solar radiation combined with either ambient or future pCO2 on cellular particulate organic carbon (POC) contents and photophysiology were investigated. Results showed that increasing CO2 concentrations had greater impacts on diatom physiology than exposure to increasing solar radiation. Irrespective of the applied solar radiation regime, cellular POC quotas increased with future pCO2 in both diatoms. Lowered maximum quantum yields of photochemistry in PSII (Fv /Fm ) indicated a higher photosensitivity under these conditions, being counteracted by increased cellular concentrations of functional photosynthetic reaction centers. Overall, our results suggest that both bloom-forming Antarctic coastal diatoms might increase carbon contents under future pCO2 conditions despite reduced physiological fitness. This indicates a higher potential for primary productivity by the two diatom species with important implications for the CO2 sequestration potential of diatom communities in the future coastal Southern Ocean.

Specific eukaryotic plankton are good predictors of net community production in the Western Antarctic Peninsula

Despite our current realization of the tremendous diversity that exists in plankton communities, we have little understanding of how this biodiversity influences the biological carbon pump other than broad paradigms such as diatoms contributing disproportionally to carbon export. Here we combine high-resolution underway O₂/Ar, which provides an estimate of net community production, with high-throughput 18 S ribosomal DNA sequencing to elucidate the relationship between eukaryotic plankton community structure and carbon export potential at the Western Antarctica Peninsula (WAP), a region which has experienced rapid warming and ecosystem changes. Our results show that in a diverse plankton system comprised of ~464 operational taxonomic units (OTUs) with at least 97% 18 S identity, as few as two or three key OTUs, i.e. large diatoms, Phaeocystis, and mixotrophic/phagotrophic dinoflagellates, can explain a large majority of the spatial variability in the carbon export potential (76-92%). Moreover, we find based on a community co-occurrence network analysis that ecosystems with lower export potential have more tightly coupled communities. Our results indicate that defining plankton communities at a deeper taxonomic resolution than by functional groups and accounting for the differences in size and coupling between groups can substantially improve organic carbon flux predictions.

Resistance of Arctic phytoplankton to ocean acidification and enhanced irradiance

The Arctic Ocean is a region particularly prone to ongoing ocean acidification (OA) and climate-driven changes. The influence of these changes on Arctic phytoplankton assemblages, however, remains poorly understood. In order to understand how OA and enhanced irradiances (e.g., resulting from sea–ice retreat) will alter the species composition, primary production, and eco-physiology of Arctic phytoplankton, we conducted an incubation experiment with an assemblage from Baffin Bay (71°N, 68°W) under different carbonate chemistry and irradiance regimes. Seawater was collected from just below the deep Chl a maximum, and the resident phytoplankton were exposed to 380 and 1000 µatm pCO₂ at both 15 and 35% incident irradiance. On-deck incubations, in which temperatures were 6 °C above in situ conditions, were monitored for phytoplankton growth, biomass stoichiometry, net primary production, photo-physiology, and taxonomic composition. During the 8-day experiment, taxonomic diversity decreased and the diatom Chaetoceros socialis became increasingly dominant irrespective of light or CO₂ levels. We found no statistically significant effects from either higher CO₂ or light on physiological properties of phytoplankton during the experiment. We did, however, observe an initial 2-day stress response in all treatments, and slight photo-physiological responses to higher CO₂ and light during the first five days of the incubation. Our results thus indicate high resistance of Arctic phytoplankton to OA and enhanced irradiance levels, challenging the commonly predicted stimulatory effects of enhanced CO₂ and light availability for primary production.

Two Southern Ocean diatoms are more sensitive to ocean acidification and changes in irradiance than the prymnesiophyte Phaeocystis antarctica

To better understand the impact of ocean acidification (OA) and changes in light availability on Southern Ocean phytoplankton physiology, we investigated the effects of pCO₂ (380 and 800 µatm) in combination with low and high irradiance (20 or 50 and 200 µmol photons m^-2  s^-1 ) on growth, particulate organic carbon (POC) fixation and photophysiology in the three ecologically relevant species Chaetoceros debilis, Fragilariopsis kerguelensis and Phaeocystis antarctica. Irrespective of the light scenario, neither growth nor POC per cell was stimulated by OA in any of the tested species and the two diatoms even displayed negative responses in growth (e.g. C. debilis) or POC content (e.g. F. kerguelensis) under OA in conjunction with high light. For both diatoms, also maximum quantum yields of photosystem II (F_v /F_m ) were decreased under these conditions, indicating lowered photochemical efficiencies. To counteract the negative effects by OA and high light, the two diatoms showed diverging photoacclimation strategies. While cellular chlorophyll a (Chl a) and fucoxanthin contents were enhanced in C. debilis to potentially maximize light absorption, F. kerguelensis exhibited reduced Chl a per cell, increased disconnection of antennae from photosystem II reaction centers and strongly lowered absolute electron transport rates (ETR). The decline in ETRs in F. kerguelensis might be explained in terms of different species-specific strategies for tuning the available flux of adenosine triphosphate and nicotinamide adenine dinucleotide phosphate. Overall, our results revealed that P. antarctica was more tolerant to OA and changes in irradiance than the two diatoms, which may have important implications for biogeochemical cycling.

Effects of ocean acidification on primary production in a coastal North Sea phytoplankton community

We studied the effect of ocean acidification (OA) on a coastal North Sea plankton community in a long-term mesocosm CO₂-enrichment experiment (BIOACID II long-term mesocosm study). From March to July 2013, 10 mesocosms of 19 m length with a volume of 47.5 to 55.9 m³ were deployed in the Gullmar Fjord, Sweden. CO₂ concentrations were enriched in five mesocosms to reach average CO₂ partial pressures (pCO₂) of 760 μatm. The remaining five mesocosms were used as control at ambient pCO₂ of 380 μatm. Our paper is part of a PLOS collection on this long-term mesocosm experiment. Here, we here tested the effect of OA on total primary production (PP_T) by performing ¹⁴C-based bottle incubations for 24 h. Furthermore, photoacclimation was assessed by conducting ¹⁴C-based photosynthesis-irradiance response (P/I) curves. Changes in chlorophyll a concentrations over time were reflected in the development of PP_T, and showed higher phytoplankton biomass build-up under OA. We observed two subsequent phytoplankton blooms in all mesocosms, with peaks in PP_T around day 33 and day 56. OA had no significant effect on PP_T, except for a marginal increase during the second phytoplankton bloom when inorganic nutrients were already depleted. Maximum light use efficiencies and light saturation indices calculated from the P/I curves changed simultaneously in all mesocosms, and suggest that OA did not alter phytoplankton photoacclimation. Despite large variability in time-integrated productivity estimates among replicates, our overall results indicate that coastal phytoplankton communities can be affected by OA at certain times of the seasonal succession with potential consequences for ecosystem functioning.

Leads in Arctic pack ice enable early phytoplankton blooms below snow-covered sea ice

The Arctic icescape is rapidly transforming from a thicker multiyear ice cover to a thinner and largely seasonal first-year ice cover with significant consequences for Arctic primary production. One critical challenge is to understand how productivity will change within the next decades. Recent studies have reported extensive phytoplankton blooms beneath ponded sea ice during summer, indicating that satellite-based Arctic annual primary production estimates may be significantly underestimated. Here we present a unique time-series of a phytoplankton spring bloom observed beneath snow-covered Arctic pack ice. The bloom, dominated by the haptophyte algae Phaeocystis pouchetii, caused near depletion of the surface nitrate inventory and a decline in dissolved inorganic carbon by 16 ± 6 g C m^-2. Ocean circulation characteristics in the area indicated that the bloom developed in situ despite the snow-covered sea ice. Leads in the dynamic ice cover provided added sunlight necessary to initiate and sustain the bloom. Phytoplankton blooms beneath snow-covered ice might become more common and widespread in the future Arctic Ocean with frequent lead formation due to thinner and more dynamic sea ice despite projected increases in high-Arctic snowfall. This could alter productivity, marine food webs and carbon sequestration in the Arctic Ocean.

Southern Ocean phytoplankton physiology in a changing climate

The Southern Ocean (SO) is a major sink for anthropogenic atmospheric carbon dioxide (CO₂), potentially harbouring even greater potential for additional sequestration of CO₂ through enhanced phytoplankton productivity. In the SO, primary productivity is primarily driven by bottom up processes (physical and chemical conditions) which are spatially and temporally heterogeneous. Due to a paucity of trace metals (such as iron) and high variability in light, much of the SO is characterised by an ecological paradox of high macronutrient concentrations yet uncharacteristically low chlorophyll concentrations. It is expected that with increased anthropogenic CO₂ emissions and the coincident warming, the major physical and chemical process that govern the SO will alter, influencing the biological capacity and functioning of the ecosystem. This review focuses on the SO primary producers and the bottom up processes that underpin their health and productivity. It looks at the major physico-chemical drivers of change in the SO, and based on current physiological knowledge, explores how these changes will likely manifest in phytoplankton, specifically, what are the physiological changes and floristic shifts that are likely to ensue and how this may translate into changes in the carbon sink capacity, net primary productivity and functionality of the SO.

Acidification, not carbonation, is the major regulator of carbon fluxes in the coccolithophore Emiliania huxleyi

A combined increase in seawater [CO2 ] and [H(+) ] was recently shown to induce a shift from photosynthetic HCO3 (-) to CO2 uptake in Emiliania huxleyi. This shift occurred within minutes, whereas acclimation to ocean acidification (OA) did not affect the carbon source. To identify the driver of this shift, we exposed low- and high-light acclimated E. huxleyi to a matrix of two levels of dissolved inorganic carbon (1400, 2800 μmol kg(-1) ) and pH (8.15, 7.85) and directly measured cellular O2 , CO2 and HCO3 (-) fluxes under these conditions. Exposure to increased [CO2 ] had little effect on the photosynthetic fluxes, whereas increased [H(+) ] led to a significant decline in HCO3 (-) uptake. Low-light acclimated cells overcompensated for the inhibition of HCO3 (-) uptake by increasing CO2 uptake. High-light acclimated cells, relying on higher proportions of HCO3 (-) uptake, could not increase CO2 uptake and photosynthetic O2 evolution consequently became carbon-limited. These regulations indicate that OA responses in photosynthesis are caused by [H(+) ] rather than by [CO2 ]. The impaired HCO3 (-) uptake also provides a mechanistic explanation for lowered calcification under OA. Moreover, it explains the OA-dependent decrease in photosynthesis observed in high-light grown phytoplankton.