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Bartolić P, Morgan EJ, Padilla-García N, Kolář F. Ploidy as a leaky reproductive barrier: mechanisms, rates and evolutionary significance of interploidy gene flow. ANNALS OF BOTANY 2024; 134:537-550. [PMID: 38868992 PMCID: PMC11523636 DOI: 10.1093/aob/mcae096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 06/12/2024] [Indexed: 06/14/2024]
Abstract
BACKGROUND Whole-genome duplication (polyploidization) is a dominant force in sympatric speciation, particularly in plants. Genome doubling instantly poses a barrier to gene flow owing to the strong crossing incompatibilities between individuals differing in ploidy. The strength of the barrier, however, varies from species to species and recent genetic investigations revealed cases of rampant interploidy introgression in multiple ploidy-variable species. SCOPE Here, we review novel insights into the frequency of interploidy gene flow in natural systems and summarize the underlying mechanisms promoting interploidy gene flow. Field surveys, occasionally complemented by crossing experiments, suggest frequent opportunities for interploidy gene flow, particularly in the direction from diploid to tetraploid, and between (higher) polyploids. However, a scarcity of accompanying population genetic evidence and a virtual lack of integration of these approaches leave the underlying mechanisms and levels of realized interploidy gene flow in nature largely unknown. Finally, we discuss potential consequences of interploidy genome permeability on polyploid speciation and adaptation and highlight novel avenues that have just recently been opened by the very first genomic studies of ploidy-variable species. Standing in stark contrast with rapidly accumulating evidence for evolutionary importance of homoploid introgression, similar cases in ploidy-variable systems are yet to be documented. CONCLUSIONS The genomics era provides novel opportunity to re-evaluate the role of interploidy introgression in speciation and adaptation. To achieve this goal, interdisciplinary studies bordering ecology and population genetics and genomics are needed.
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Affiliation(s)
- Paolo Bartolić
- Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, CZ-128 01 Prague, Czech Republic
| | - Emma J Morgan
- Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, CZ-128 01 Prague, Czech Republic
| | - Nélida Padilla-García
- Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, CZ-128 01 Prague, Czech Republic
- Departamento de Botánica y Fisiología Vegetal, University of Salamanca, 37007 Salamanca, Spain
| | - Filip Kolář
- Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, CZ-128 01 Prague, Czech Republic
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Vaz de Sousa D, Greve M, Oberlander KC. Friends without benefits: Extensive cytotype sympatry and polyploid persistence in an African geophyte. AMERICAN JOURNAL OF BOTANY 2024; 111:e16291. [PMID: 38439133 DOI: 10.1002/ajb2.16291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 12/08/2023] [Accepted: 12/08/2023] [Indexed: 03/06/2024]
Abstract
PREMISE Polyploidy is a major factor in plant adaptation and speciation. Multiple mechanisms contribute to autopolyploid frequency within populations, but uncertainties remain regarding mechanisms that facilitate polyploid establishment and persistence. Here we aimed to document and predict cytotype distributions of Oxalis obliquifolia Steud. ex A. Rich. across Gauteng, South Africa, and test for evidence of possible mechanisms, including morphological, phenological, and reproductive traits, that may potentially facilitate polyploid persistence. METHODS Over 320 O. obliquifolia plants from 25 sites were cytotyped using flow cytometry, and DNA ploidy was confirmed using meiotic chromosome squashes. Cytotypes were mapped and correlations with abiotic variables assessed using ordinations. To assess morphological and phenological associations with cytotype, we grew multiple cytotypes in a common garden, measured phenotypic traits and compared them using linear models and discriminant analyses. Intercytotype reproductive isolation was assessed using crossing experiments, and AMOVAs based on ITS DNA sequences tested for cytogeographic structure. RESULTS Six cytotypes were identified, and most sites had multiple cytotypes. Abiotic variables were not predictive of cytotype distribution. A clear gigas effect was present. Differences in flower size and phenology suggested pollinator interactions could play a role in polyploid persistence. Intercytotype crosses produced seed at low frequency. DNA data suggested diploids and polyploids were largely reproductively isolated in situ, and polyploidization events were not frequent enough to explain high cytotype sympatry. CONCLUSIONS Diploids and polyploids are behaving as separate species, despite little observable niche differentiation and non-zero potential intercytotype seed set. Tests on biotic interactions and intercytotype F1 fitness may provide insights into diploid and polyploid coexistence.
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Affiliation(s)
- Damian Vaz de Sousa
- Department of Plant and Soil Science, University of Pretoria, Private Bag X20, Hatfield, 0028, Pretoria, South Africa
- H.G.W.J. Schweickerdt Herbarium, Department of Plant and Soil Science, University of Pretoria, Pretoria, South Africa
| | - Michelle Greve
- Department of Plant and Soil Science, University of Pretoria, Private Bag X20, Hatfield, 0028, Pretoria, South Africa
| | - Kenneth C Oberlander
- H.G.W.J. Schweickerdt Herbarium, Department of Plant and Soil Science, University of Pretoria, Pretoria, South Africa
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Duchoslav M, Jandová M, Kobrlová L, Šafářová L, Brus J, Vojtěchová K. Intricate Distribution Patterns of Six Cytotypes of Allium oleraceum at a Continental Scale: Niche Expansion and Innovation Followed by Niche Contraction With Increasing Ploidy Level. FRONTIERS IN PLANT SCIENCE 2020; 11:591137. [PMID: 33362819 PMCID: PMC7755979 DOI: 10.3389/fpls.2020.591137] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2020] [Accepted: 11/06/2020] [Indexed: 05/23/2023]
Abstract
The establishment and success of polyploids are thought to often be facilitated by ecological niche differentiation from diploids. Unfortunately, most studies compared diploids and polyploids, ignoring variation in ploidy level in polyploids. To fill this gap, we performed a large-scale study of 11,163 samples from 1,283 populations of the polyploid perennial geophyte Allium oleraceum with reported mixed-ploidy populations, revealed distribution ranges of cytotypes, assessed their niches and explored the pattern of niche change with increasing ploidy level. Altogether, six ploidy levels (3x-8x) were identified. The most common were pentaploids (53.6%) followed by hexaploids (22.7%) and tetraploids (21.6%). Higher cytotype diversity was found at lower latitudes than at higher latitudes (>52° N), where only tetraploids and pentaploids occurred. We detected 17.4% of mixed-ploidy populations, usually as a combination of two, rarely of three, cytotypes. The majority of mixed-ploidy populations were found in zones of sympatry of the participating cytotypes, suggesting they have arisen through migration (secondary contact zone). Using coarse-grained variables (climate, soil), we found evidence of both niche expansion and innovation in tetraploids related to triploids, whereas higher ploidy levels showed almost zero niche expansion, but a trend of increased niche unfilling of tetraploids. Niche unfilling in higher ploidy levels was caused by a contraction of niche envelopes toward lower continentality of the climate and resulted in a gradual decrease of niche breadth and a gradual shift in niche optima. Field-recorded data indicated wide habitat breadth of tetraploids and pentaploids, but also a pattern of increasing synanthropy in higher ploidy levels. Wide niche breadth of tetra- and pentaploids might be related to their multiple origins from different environmental conditions, higher "age", and retained sexuality, which likely preserve their adaptive potential. In contrast, other cytotypes with narrower niches are mostly asexual, probably originating from a limited range of contrasting environments. Persistence of local ploidy mixtures could be enabled by the perenniality of A. oleraceum and its prevalence of vegetative reproduction, facilitating the establishment and decreasing exclusion of minority cytotype due to its reproductive costs. Vegetative reproduction might also significantly accelerate colonization of new areas, including recolonization of previously glaciated areas.
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Affiliation(s)
- Martin Duchoslav
- Plant Biosystematics and Ecology RG, Department of Botany, Faculty of Science, Palacký University, Olomouc, Czechia
| | - Michaela Jandová
- Plant Biosystematics and Ecology RG, Department of Botany, Faculty of Science, Palacký University, Olomouc, Czechia
- Institute of Botany, Czech Academy of Sciences, Pruhonice, Czechia
| | - Lucie Kobrlová
- Plant Biosystematics and Ecology RG, Department of Botany, Faculty of Science, Palacký University, Olomouc, Czechia
| | - Lenka Šafářová
- Plant Biosystematics and Ecology RG, Department of Botany, Faculty of Science, Palacký University, Olomouc, Czechia
| | - Jan Brus
- Department of Geoinformatics, Faculty of Science, Palacký University, Olomouc, Czechia
| | - Kateřina Vojtěchová
- Plant Biosystematics and Ecology RG, Department of Botany, Faculty of Science, Palacký University, Olomouc, Czechia
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Papini A, Signorini MA, Foggi B, Della Giovampaola E, Ongaro L, Vivona L, Santosuosso U, Tani C, Bruschi P. History vs. legend: Retracing invasion and spread of Oxalis pes-caprae L. in Europe and the Mediterranean area. PLoS One 2017; 12:e0190237. [PMID: 29287103 PMCID: PMC5747460 DOI: 10.1371/journal.pone.0190237] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2017] [Accepted: 12/10/2017] [Indexed: 11/18/2022] Open
Abstract
Oxalis pes-caprae L. is a South African geophyte that behaves as an invasive in the eurimediterranean area. According to a long-established hypothesis, O. pes-caprae may have invaded Europe and the Mediterranean area starting from a single plant introduced in the Botanical Garden of Malta at the beginning of the 19th century. The aim of this work was to test this hypothesis, to track the arrival of O. pes-caprae in different countries of the Euro-Mediterranean area and to understand the pathways of spreading and particularly its starting point(s). Historical data attesting the presence of the plant in the whole Euro-Mediterranean region were collected from different sources: herbarium specimens, Floras and other botanical papers, plant lists of gardens, catalogs of plant nurseries and plant dealers. First records of the plant (both cultivated and wild) for each Territorial Unit (3rd level of NUTS) were selected and used to draw up a diachronic map and an animated graphic. Both documents clearly show that oldest records are scattered throughout the whole area, proving that the plant arrived in Europe and in the Mediterranean region more times independently and that its spreading started in different times from several different centers of invasion. Botanical gardens and other public or private gardens, nurseries and plant dealers, and above all seaside towns and harbors seemingly played a strategic role as a source of either intentional and unintentional introduction or spread. A geographic profiling analysis was performed to analyse the data. We used also techniques (Silhouette, Kmeans and Voronoi tessellation) capable of verifying the presence of more than one independent clusters of data on the basis of their geographical distribution. Microsatellites were employed for a preliminary analysis of genetic variation in the Mediterranean. Even if the sampling was insufficient, particularly among the populations of the original area, our data supported three main groups of populations, one of them corresponding to the central group of populations identified by GP analysis, and the other two corresponding, respectively, to the western and the eastern cluster of data. The most probable areas of origin of the invasion in the three clusters of observations are characterized by the presence of localities where the invasive plant was cultivated, with the exception of the Iberian cluster of observation where the observations in the field predate the data about known cultivation localities. Alternative possible reasons are also suggested, to explain the current prevalence of pentaploid short-styled plants in the Euro-Mediterranean area.
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Affiliation(s)
- Alessio Papini
- University of Florence, Dept. Biology (BIO), Florence, Italy
- * E-mail:
| | | | - Bruno Foggi
- University of Florence, Dept. Biology (BIO), Florence, Italy
| | | | - Luca Ongaro
- Istituto Agronomico per l’Oltremare (IAO), Florence, Italy
| | - Laura Vivona
- University of Florence, Dept. of AgriFood Production and Environmental Sciences (DISPAA), Florence, Italy
| | - Ugo Santosuosso
- University of Florence, Dept. of Clinical and experimental Medicine (DMSC), Florence, Italy
| | - Corrado Tani
- University of Florence, Dept. Biology (BIO), Florence, Italy
| | - Piero Bruschi
- University of Florence, Dept. of AgriFood Production and Environmental Sciences (DISPAA), Florence, Italy
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Sutherland BL, Galloway LF. Postzygotic isolation varies by ploidy level within a polyploid complex. THE NEW PHYTOLOGIST 2017; 213:404-412. [PMID: 27533526 DOI: 10.1111/nph.14116] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2016] [Accepted: 06/12/2016] [Indexed: 05/20/2023]
Abstract
Whole genome duplication is considered to be a significant contributor to angiosperm speciation due to accumulation of rapid, strong interploid reproductive isolation. However, recent work suggests that interploid reproductive isolation may not be complete, especially among higher order cytotypes. This study evaluates postzygotic reproductive isolation among three cytotypes within a polyploid complex. We conducted reciprocal crosses using two diploid and two hexaploid populations each crossed to tetraploid populations spanning the geographic and phylogenetic range of the Campanula rotundifolia polyploid complex. Interploid and intrapopulation crosses were scored for fruit set, seed number, germination proportion and pollen viability. Postzygotic isolation was calculated for each cross as the product of these fitness components. A subset of offspring was cytotyped via flow cytometry. Postzygotic isolation was significantly lower in tetraploid-hexaploid crosses than diploid-tetraploid crosses, mostly due to substantially higher germination among tetraploid-hexaploid crosses. Tetraploid-hexaploid crosses produced pentaploids exclusively, whereas diploid-tetraploid crosses produced both triploids and tetraploids in high frequencies. Postzygotic isolation was weaker among higher order polyploids than between diploids and tetraploids, and unreduced gametes may facilitate diploid-tetraploid reproduction. This incomplete postzygotic isolation could allow ongoing interploid gene flow, especially among higher order polyploids, which may slow divergence and speciation in polyploid complexes.
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Affiliation(s)
| | - Laura F Galloway
- Department of Biology, University of Virginia, Charlottesville, VA, 22904-4328, USA
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Castro S, Castro M, Ferrero V, Costa J, Tavares D, Navarro L, Loureiro J. Invasion Fosters Change: Independent Evolutionary Shifts in Reproductive Traits after Oxalis pes-caprae L. Introduction. FRONTIERS IN PLANT SCIENCE 2016; 7:874. [PMID: 27446109 PMCID: PMC4919335 DOI: 10.3389/fpls.2016.00874] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2016] [Accepted: 06/03/2016] [Indexed: 05/11/2023]
Abstract
Biological invasions offer optimal scenarios to study evolutionary changes under contemporary timescales. After long-distance dispersal, exotic species have to cope with strong mate limitation, and shifts toward uniparental reproduction have been hypothesized to be selectively advantageous. Oxalis pes-caprae is a clonal tristylous species native to South Africa, and invasive in Mediterranean regions worldwide. It reproduces sexually and asexually but the importance of each strategy differs between ranges. Native populations reproduce mostly sexually while in invasive ones asexual reproduction is the prevailing strategy due to the dominance of pentaploid monomorphic populations. Nevertheless, two contrasting scenarios have been observed after introduction: transition toward clonality, and re-acquisition of sexuality fueled by multiple introductions of compatible mates. Here, we aimed to assess evolutionary changes of reproductive traits in O. pes-caprae invasive populations and evaluate whether these traits could be related with invasion success and prevalence of certain forms in the western Mediterranean basin. Sexual and asexual reproduction traits were quantified under optimal conditions in a common garden experiment including native and invasive sexual, predominately asexual, and obligated asexual individuals. Different reproductive, ecological, and genetic constraints created by long-distance dispersal seem to have generated different selective pressures in sexual and asexual traits, with our results supporting evolutionary changes in invasive populations of O. pes-caprae. Native plants had higher sexual fitness, while a transition toward clonality was clear for invasive forms, supporting clonal reproduction as a major trait driving invasion. Differences were also observed among invasive plants, with sexual forms having increased dispersal potential; thus, they are expected to be in advantage in comparison with predominantly asexual and obligated asexual plants, and may become widespread in the future. Historical processes, like the initial introduction of predominantly asexual forms followed by sexual forms more recently, could be in the origin of current distribution patterns of O. pes-caprae in the western Mediterranean. This study shows that invasion processes are very dynamic and that ecological and genetic constraints determined by the invasion process may originate different reproductive strategies that are likely to determine invasion success.
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Affiliation(s)
- Sílvia Castro
- Centre for Functional Ecology and Department of Life Sciences, University of CoimbraCoimbra, Portugal
- *Correspondence: Sílvia Castro,
| | - Mariana Castro
- Centre for Functional Ecology and Department of Life Sciences, University of CoimbraCoimbra, Portugal
| | - Victoria Ferrero
- Department of Plant Biology, Faculty of Science, University of VigoVigo, Spain
- Department of Ecology and Evolutionary Biology, University of TorontoToronto, ON, Canada
| | - Joana Costa
- Centre for Functional Ecology and Department of Life Sciences, University of CoimbraCoimbra, Portugal
| | - Daniela Tavares
- Centre for Functional Ecology and Department of Life Sciences, University of CoimbraCoimbra, Portugal
| | - Luis Navarro
- Department of Plant Biology, Faculty of Science, University of VigoVigo, Spain
| | - João Loureiro
- Centre for Functional Ecology and Department of Life Sciences, University of CoimbraCoimbra, Portugal
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Abstract
Flowering plants possess an unrivaled diversity of mechanisms for achieving sexual and asexual reproduction, often simultaneously. The commonest type of asexual reproduction is clonal growth (vegetative propagation) in which parental genotypes (genets) produce vegetative modules (ramets) that are capable of independent growth, reproduction, and often dispersal. Clonal growth leads to an expansion in the size of genets and increased fitness because large floral displays increase fertility and opportunities for outcrossing. Moreover, the clonal dispersal of vegetative propagules can assist "mate finding," particularly in aquatic plants. However, there are ecological circumstances in which functional antagonism between sexual and asexual reproductive modes can negatively affect the fitness of clonal plants. Populations of heterostylous and dioecious species have a small number of mating groups (two or three), which should occur at equal frequency in equilibrium populations. Extensive clonal growth and vegetative dispersal can disrupt the functioning of these sexual polymorphisms, resulting in biased morph ratios and populations with a single mating group, with consequences for fertility and mating. In populations in which clonal propagation predominates, mutations reducing fertility may lead to sexual dysfunction and even the loss of sex. Recent evidence suggests that somatic mutations can play a significant role in influencing fitness in clonal plants and may also help explain the occurrence of genetic diversity in sterile clonal populations. Highly polymorphic genetic markers offer outstanding opportunities for gaining novel insights into functional interactions between sexual and clonal reproduction in flowering plants.
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Affiliation(s)
- Spencer C H Barrett
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2
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Ferrero V, Barrett SCH, Castro S, Caldeirinha P, Navarro L, Loureiro J, Rodríguez-Echeverría S. Invasion genetics of the Bermuda buttercup (Oxalis pes-caprae): complex intercontinental patterns of genetic diversity, polyploidy and heterostyly characterize both native and introduced populations. Mol Ecol 2015; 24:2143-55. [DOI: 10.1111/mec.13056] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2014] [Revised: 12/15/2014] [Accepted: 12/20/2014] [Indexed: 01/16/2023]
Affiliation(s)
- Victoria Ferrero
- Department of Ecology and Evolutionary Biology; University of Toronto; 25 Willcocks Street M5S 3B2 Toronto ON Canada
- Department of Plant Biology; Faculty of Science; University of Vigo; As Lagoas-Marcosende 36200 Vigo Spain
| | - Spencer C. H. Barrett
- Department of Ecology and Evolutionary Biology; University of Toronto; 25 Willcocks Street M5S 3B2 Toronto ON Canada
| | - Sílvia Castro
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
| | - Patrícia Caldeirinha
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
| | - Luis Navarro
- Department of Plant Biology; Faculty of Science; University of Vigo; As Lagoas-Marcosende 36200 Vigo Spain
| | - João Loureiro
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
| | - Susana Rodríguez-Echeverría
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
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Reproductive strategy of the invasive Oxalis pes-caprae: distribution patterns of floral morphs, ploidy levels and sexual reproduction. Biol Invasions 2013. [DOI: 10.1007/s10530-013-0414-2] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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