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Burti S, Banzato T, Coghlan S, Wodzinski M, Bendazzoli M, Zotti A. Artificial intelligence in veterinary diagnostic imaging: Perspectives and limitations. Res Vet Sci 2024; 175:105317. [PMID: 38843690 DOI: 10.1016/j.rvsc.2024.105317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 05/22/2024] [Accepted: 05/29/2024] [Indexed: 06/17/2024]
Abstract
The field of veterinary diagnostic imaging is undergoing significant transformation with the integration of artificial intelligence (AI) tools. This manuscript provides an overview of the current state and future prospects of AI in veterinary diagnostic imaging. The manuscript delves into various applications of AI across different imaging modalities, such as radiology, ultrasound, computed tomography, and magnetic resonance imaging. Examples of AI applications in each modality are provided, ranging from orthopaedics to internal medicine, cardiology, and more. Notable studies are discussed, demonstrating AI's potential for improved accuracy in detecting and classifying various abnormalities. The ethical considerations of using AI in veterinary diagnostics are also explored, highlighting the need for transparent AI development, accurate training data, awareness of the limitations of AI models, and the importance of maintaining human expertise in the decision-making process. The manuscript underscores the significance of AI as a decision support tool rather than a replacement for human judgement. In conclusion, this comprehensive manuscript offers an assessment of the current landscape and future potential of AI in veterinary diagnostic imaging. It provides insights into the benefits and challenges of integrating AI into clinical practice while emphasizing the critical role of ethics and human expertise in ensuring the wellbeing of veterinary patients.
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Affiliation(s)
- Silvia Burti
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, Legnaro, 35020 Padua, Italy.
| | - Tommaso Banzato
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, Legnaro, 35020 Padua, Italy
| | - Simon Coghlan
- School of Computing and Information Systems, Centre for AI and Digital Ethics, Australian Research Council Centre of Excellence for Automated Decision-Making and Society, University of Melbourne, 3052 Melbourne, Australia
| | - Marek Wodzinski
- Faculty of Electrical Engineering, Automatics, Computer Science and Biomedical Engineering, AGH University of Krakow, 30059 Kraków, Poland; Information Systems Institute, University of Applied Sciences - Western Switzerland (HES-SO Valais), 3960 Sierre, Switzerland
| | - Margherita Bendazzoli
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, Legnaro, 35020 Padua, Italy
| | - Alessandro Zotti
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, Legnaro, 35020 Padua, Italy
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2
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Suksangvoravong H, Choisunirachon N, Tongloy T, Chuwongin S, Boonsang S, Kittichai V, Thanaboonnipat C. Automatic classification and grading of canine tracheal collapse on thoracic radiographs by using deep learning. Vet Radiol Ultrasound 2024. [PMID: 39012062 DOI: 10.1111/vru.13413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 06/27/2024] [Accepted: 07/05/2024] [Indexed: 07/17/2024] Open
Abstract
Tracheal collapse is a chronic and progressively worsening disease; the severity of clinical symptoms experienced by affected individuals depends on the degree of airway collapse. Cutting-edge automated tools are necessary to modernize disease screening using radiographs across various veterinary settings, such as animal clinics and hospitals. This is primarily due to the inherent challenges associated with interpreting uncertainties among veterinarians. In this study, an artificial intelligence model was developed to screen canine tracheal collapse using archived lateral cervicothoracic radiographs. This model can differentiate between a normal and collapsed trachea, ranging from early to severe degrees. The you-only-look-once (YOLO) models, including YOLO v3, YOLO v4, and YOLO v4 tiny, were used to train and test data sets under the in-house XXX platform. The results showed that the YOLO v4 tiny-416 model had satisfactory performance in screening among the normal trachea, grade 1-2 tracheal collapse, and grade 3-4 tracheal collapse with 98.30% sensitivity, 99.20% specificity, and 98.90% accuracy. The area under the curve of the precision-recall curve was >0.8, which demonstrated high diagnostic accuracy. The intraobserver agreement between deep learning and radiologists was κ = 0.975 (P < .001), with all observers having excellent agreement (κ = 1.00, P < .001). The intraclass correlation coefficient between observers was >0.90, which represented excellent consistency. Therefore, the deep learning model can be a useful and reliable method for effective screening and classification of the degree of tracheal collapse based on routine lateral cervicothoracic radiographs.
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Affiliation(s)
- Hathaiphat Suksangvoravong
- Department of Veterinary Surgery, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand
| | - Nan Choisunirachon
- Department of Veterinary Surgery, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand
| | - Teerawat Tongloy
- College of Advanced Manufacturing Innovation, King Mongkut's Institute of Technology Ladkrabang, Bangkok, Thailand
| | - Santhad Chuwongin
- College of Advanced Manufacturing Innovation, King Mongkut's Institute of Technology Ladkrabang, Bangkok, Thailand
| | - Siridech Boonsang
- Department of Electrical Engineering, Faculty of Engineering, King Mongkut's Institute of Technology Ladkrabang, Bangkok, Thailand
| | - Veerayuth Kittichai
- Faculty of Medicine, King Mongkut's Institute of Technology Ladkrabang, Bangkok, Thailand
| | - Chutimon Thanaboonnipat
- Department of Veterinary Surgery, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand
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3
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Chu CP. ChatGPT in veterinary medicine: a practical guidance of generative artificial intelligence in clinics, education, and research. Front Vet Sci 2024; 11:1395934. [PMID: 38911678 PMCID: PMC11192069 DOI: 10.3389/fvets.2024.1395934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 05/21/2024] [Indexed: 06/25/2024] Open
Abstract
ChatGPT, the most accessible generative artificial intelligence (AI) tool, offers considerable potential for veterinary medicine, yet a dedicated review of its specific applications is lacking. This review concisely synthesizes the latest research and practical applications of ChatGPT within the clinical, educational, and research domains of veterinary medicine. It intends to provide specific guidance and actionable examples of how generative AI can be directly utilized by veterinary professionals without a programming background. For practitioners, ChatGPT can extract patient data, generate progress notes, and potentially assist in diagnosing complex cases. Veterinary educators can create custom GPTs for student support, while students can utilize ChatGPT for exam preparation. ChatGPT can aid in academic writing tasks in research, but veterinary publishers have set specific requirements for authors to follow. Despite its transformative potential, careful use is essential to avoid pitfalls like hallucination. This review addresses ethical considerations, provides learning resources, and offers tangible examples to guide responsible implementation. A table of key takeaways was provided to summarize this review. By highlighting potential benefits and limitations, this review equips veterinarians, educators, and researchers to harness the power of ChatGPT effectively.
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Affiliation(s)
- Candice P. Chu
- Department of Veterinary Pathobiology, College of Veterinary Medicine & Biomedical Sciences, Texas A&M University, College Station, TX, United States
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Nyquist ML, Fink LA, Mauldin GE, Coffman CR. Evaluation of a Novel Veterinary Dental Radiography Artificial Intelligence Software Program. J Vet Dent 2024:8987564231221071. [PMID: 38321886 DOI: 10.1177/08987564231221071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2024]
Abstract
There is a growing trend of artificial intelligence (AI) applications in veterinary medicine, with the potential to assist veterinarians in clinical decisions. A commercially available, AI-based software program (AISP) for detecting common radiographic dental pathologies in dogs and cats was assessed for agreement with two human evaluators. Furcation bone loss, periapical lucency, resorptive lesion, retained tooth root, attachment (alveolar bone) loss and tooth fracture were assessed. The AISP does not attempt to diagnose or provide treatment recommendations, nor has it been trained to identify other types of radiographic pathology. Inter-rater reliability for detecting pathologies was measured by absolute percent agreement and Gwet's agreement coefficient. There was good to excellent inter-rater reliability among all raters, suggesting the AISP performs similarly at detecting the specified pathologies compared to human evaluators. Sensitivity and specificity for the AISP were assessed using human evaluators as the reference standard. The results revealed a trend of low sensitivity and high specificity, suggesting the AISP may produce a high rate of false negatives and may not be a good tool for initial screening. However, the low rate of false positives produced by the AISP suggests it may be beneficial as a "second set of eyes" because if it detects the specific pathology, there is a high likelihood that the pathology is present. With an understanding of the AISP, as an aid and not a substitute for veterinarians, the technology may increase dental radiography utilization and diagnostic potential.
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Affiliation(s)
| | - Lisa A Fink
- Arizona Veterinary Dental Specialists, Scottsdale, AZ, USA
| | | | - Curt R Coffman
- Arizona Veterinary Dental Specialists, Scottsdale, AZ, USA
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5
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Celniak W, Wodziński M, Jurgas A, Burti S, Zotti A, Atzori M, Müller H, Banzato T. Improving the classification of veterinary thoracic radiographs through inter-species and inter-pathology self-supervised pre-training of deep learning models. Sci Rep 2023; 13:19518. [PMID: 37945653 PMCID: PMC10636209 DOI: 10.1038/s41598-023-46345-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2023] [Accepted: 10/31/2023] [Indexed: 11/12/2023] Open
Abstract
The analysis of veterinary radiographic imaging data is an essential step in the diagnosis of many thoracic lesions. Given the limited time that physicians can devote to a single patient, it would be valuable to implement an automated system to help clinicians make faster but still accurate diagnoses. Currently, most of such systems are based on supervised deep learning approaches. However, the problem with these solutions is that they need a large database of labeled data. Access to such data is often limited, as it requires a great investment of both time and money. Therefore, in this work we present a solution that allows higher classification scores to be obtained using knowledge transfer from inter-species and inter-pathology self-supervised learning methods. Before training the network for classification, pretraining of the model was performed using self-supervised learning approaches on publicly available unlabeled radiographic data of human and dog images, which allowed substantially increasing the number of images for this phase. The self-supervised learning approaches included the Beta Variational Autoencoder, the Soft-Introspective Variational Autoencoder, and a Simple Framework for Contrastive Learning of Visual Representations. After the initial pretraining, fine-tuning was performed for the collected veterinary dataset using 20% of the available data. Next, a latent space exploration was performed for each model after which the encoding part of the model was fine-tuned again, this time in a supervised manner for classification. Simple Framework for Contrastive Learning of Visual Representations proved to be the most beneficial pretraining method. Therefore, it was for this method that experiments with various fine-tuning methods were carried out. We achieved a mean ROC AUC score of 0.77 and 0.66, respectively, for the laterolateral and dorsoventral projection datasets. The results show significant improvement compared to using the model without any pretraining approach.
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Affiliation(s)
- Weronika Celniak
- University of Applied Sciences Western Switzerland (HES-SO), 3960, Sierre, Switzerland.
- Faculty of Electrical Engineering, Automatics, Computer Science and Biomedical Engineering, AGH University of Krakow, 30059, Kraków, Poland.
| | - Marek Wodziński
- University of Applied Sciences Western Switzerland (HES-SO), 3960, Sierre, Switzerland
- Faculty of Electrical Engineering, Automatics, Computer Science and Biomedical Engineering, AGH University of Krakow, 30059, Kraków, Poland
| | - Artur Jurgas
- University of Applied Sciences Western Switzerland (HES-SO), 3960, Sierre, Switzerland
- Faculty of Electrical Engineering, Automatics, Computer Science and Biomedical Engineering, AGH University of Krakow, 30059, Kraków, Poland
| | - Silvia Burti
- Department of Animal Medicine, Productions, and Health, Legnaro (PD), University of Padua, 35020, Padua, Italy
| | - Alessandro Zotti
- Department of Animal Medicine, Productions, and Health, Legnaro (PD), University of Padua, 35020, Padua, Italy
| | - Manfredo Atzori
- University of Applied Sciences Western Switzerland (HES-SO), 3960, Sierre, Switzerland
- Department of Neuroscience, University of Padua, 35121, Padua, IT, Italy
- Padova Neuroscience Center, University of Padova, Via Orus 2/B, 35129, Padova, Italy
| | - Henning Müller
- University of Applied Sciences Western Switzerland (HES-SO), 3960, Sierre, Switzerland
- Medical Faculty, University of Geneva, 1206, Geneva, Switzerland
- The Sense Research and Innovation Insitute, 1950, Sion, Switzerland
| | - Tommaso Banzato
- Department of Animal Medicine, Productions, and Health, Legnaro (PD), University of Padua, 35020, Padua, Italy
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6
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Banzato T, Wodzinski M, Burti S, Vettore E, Muller H, Zotti A. An AI-based algorithm for the automatic evaluation of image quality in canine thoracic radiographs. Sci Rep 2023; 13:17024. [PMID: 37813976 PMCID: PMC10562412 DOI: 10.1038/s41598-023-44089-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 10/03/2023] [Indexed: 10/11/2023] Open
Abstract
The aim of this study was to develop and test an artificial intelligence (AI)-based algorithm for detecting common technical errors in canine thoracic radiography. The algorithm was trained using a database of thoracic radiographs from three veterinary clinics in Italy, which were evaluated for image quality by three experienced veterinary diagnostic imagers. The algorithm was designed to classify the images as correct or having one or more of the following errors: rotation, underexposure, overexposure, incorrect limb positioning, incorrect neck positioning, blurriness, cut-off, or the presence of foreign objects, or medical devices. The algorithm was able to correctly identify errors in thoracic radiographs with an overall accuracy of 81.5% in latero-lateral and 75.7% in sagittal images. The most accurately identified errors were limb mispositioning and underexposure both in latero-lateral and sagittal images. The accuracy of the developed model in the classification of technically correct radiographs was fair in latero-lateral and good in sagittal images. The authors conclude that their AI-based algorithm is a promising tool for improving the accuracy of radiographic interpretation by identifying technical errors in canine thoracic radiographs.
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Affiliation(s)
- Tommaso Banzato
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, 35020, Legnaro, Padua, Italy.
| | - Marek Wodzinski
- Department of Measurement and Electronics, AGH University of Krakow, PL32059, Krakow, Poland
- Information Systems Institute, University of Applied Sciences - Western Switzerland (HES-SO Valais), 3960, Sierre, Switzerland
| | - Silvia Burti
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, 35020, Legnaro, Padua, Italy
| | - Eleonora Vettore
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, 35020, Legnaro, Padua, Italy
| | - Henning Muller
- Information Systems Institute, University of Applied Sciences - Western Switzerland (HES-SO Valais), 3960, Sierre, Switzerland
| | - Alessandro Zotti
- Department of Animal Medicine, Production and Health, University of Padua, Viale dell'Università 16, 35020, Legnaro, Padua, Italy
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7
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Valente C, Wodzinski M, Guglielmini C, Poser H, Chiavegato D, Zotti A, Venturini R, Banzato T. Development of an artificial intelligence-based method for the diagnosis of the severity of myxomatous mitral valve disease from canine chest radiographs. Front Vet Sci 2023; 10:1227009. [PMID: 37808107 PMCID: PMC10556456 DOI: 10.3389/fvets.2023.1227009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Accepted: 09/12/2023] [Indexed: 10/10/2023] Open
Abstract
An algorithm based on artificial intelligence (AI) was developed and tested to classify different stages of myxomatous mitral valve disease (MMVD) from canine thoracic radiographs. The radiographs were selected from the medical databases of two different institutions, considering dogs over 6 years of age that had undergone chest X-ray and echocardiographic examination. Only radiographs clearly showing the cardiac silhouette were considered. The convolutional neural network (CNN) was trained on both the right and left lateral and/or ventro-dorsal or dorso-ventral views. Each dog was classified according to the American College of Veterinary Internal Medicine (ACVIM) guidelines as stage B1, B2 or C + D. ResNet18 CNN was used as a classification network, and the results were evaluated using confusion matrices, receiver operating characteristic curves, and t-SNE and UMAP projections. The area under the curve (AUC) showed good heart-CNN performance in determining the MMVD stage from the lateral views with an AUC of 0.87, 0.77, and 0.88 for stages B1, B2, and C + D, respectively. The high accuracy of the algorithm in predicting the MMVD stage suggests that it could stand as a useful support tool in the interpretation of canine thoracic radiographs.
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Affiliation(s)
- Carlotta Valente
- Department of Animal Medicine, Production and Health, University of Padua, Padua, Italy
| | - Marek Wodzinski
- Department of Measurement and Electronics, AGH University of Science and Technology, Krakow, Poland
- Information Systems Institute, University of Applied Sciences—Western Switzerland (HES-SO Valais), Sierre, Switzerland
| | - Carlo Guglielmini
- Department of Animal Medicine, Production and Health, University of Padua, Padua, Italy
| | - Helen Poser
- Department of Animal Medicine, Production and Health, University of Padua, Padua, Italy
| | | | - Alessandro Zotti
- Department of Animal Medicine, Production and Health, University of Padua, Padua, Italy
| | | | - Tommaso Banzato
- Department of Animal Medicine, Production and Health, University of Padua, Padua, Italy
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8
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Pomerantz LK, Solano M, Kalosa-Kenyon E. Performance of a commercially available artificial intelligence software for the detection of confirmed pulmonary nodules and masses in canine thoracic radiography. Vet Radiol Ultrasound 2023; 64:881-889. [PMID: 37549965 DOI: 10.1111/vru.13287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Revised: 06/29/2023] [Accepted: 06/30/2023] [Indexed: 08/09/2023] Open
Abstract
Advancements in the field of artificial intelligence (AI) are modest in veterinary medicine relative to their substantial growth in human medicine. However, interest in this field is increasing, and commercially available veterinary AI products are already on the market. In this retrospective, diagnostic accuracy study, the accuracy of a commercially available convolutional neural network AI product (Vetology AI®) is assessed on 56 thoracic radiographic studies of pulmonary nodules and masses, as well as 32 control cases. Positive cases were confirmed to have pulmonary pathology consistent with a nodule/mass either by CT, cytology, or histopathology. The AI software detected pulmonary nodules/masses in 31 of 56 confirmed cases and correctly classified 30 of 32 control cases. The AI model accuracy is 69.3%, balanced accuracy 74.6%, F1-score 0.7, sensitivity 55.4%, and specificity 93.75%. Building on these results, both the current clinical relevance of AI and how veterinarians can be expected to use available commercial products are discussed.
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Affiliation(s)
- Leah Kathleen Pomerantz
- Department of Clinical Sciences, Tufts University Cummings School of Veterinary Medicine, North Grafton, Massachusetts, USA
| | - Mauricio Solano
- Department of Clinical Sciences, Tufts University Cummings School of Veterinary Medicine, North Grafton, Massachusetts, USA
| | - Eric Kalosa-Kenyon
- Department of Clinical Sciences, Tufts University Cummings School of Veterinary Medicine, North Grafton, Massachusetts, USA
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9
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Pereira AI, Franco-Gonçalo P, Leite P, Ribeiro A, Alves-Pimenta MS, Colaço B, Loureiro C, Gonçalves L, Filipe V, Ginja M. Artificial Intelligence in Veterinary Imaging: An Overview. Vet Sci 2023; 10:vetsci10050320. [PMID: 37235403 DOI: 10.3390/vetsci10050320] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Revised: 04/21/2023] [Accepted: 04/25/2023] [Indexed: 05/28/2023] Open
Abstract
Artificial intelligence and machine learning have been increasingly used in the medical imaging field in the past few years. The evaluation of medical images is very subjective and complex, and therefore the application of artificial intelligence and deep learning methods to automatize the analysis process would be very beneficial. A lot of researchers have been applying these methods to image analysis diagnosis, developing software capable of assisting veterinary doctors or radiologists in their daily practice. This article details the main methodologies used to develop software applications on machine learning and how veterinarians with an interest in this field can benefit from such methodologies. The main goal of this study is to offer veterinary professionals a simple guide to enable them to understand the basics of artificial intelligence and machine learning and the concepts such as deep learning, convolutional neural networks, transfer learning, and the performance evaluation method. The language is adapted for medical technicians, and the work already published in this field is reviewed for application in the imaging diagnosis of different animal body systems: musculoskeletal, thoracic, nervous, and abdominal.
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Affiliation(s)
- Ana Inês Pereira
- Department of Veterinary Science, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
| | - Pedro Franco-Gonçalo
- Department of Veterinary Science, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Veterinary and Animal Research Centre (CECAV), University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Associate Laboratory for Animal and Veterinary Sciences (AL4AnimalS), 5000-801 Vila Real, Portugal
| | - Pedro Leite
- Neadvance Machine Vision SA, 4705-002 Braga, Portugal
| | | | - Maria Sofia Alves-Pimenta
- Veterinary and Animal Research Centre (CECAV), University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Associate Laboratory for Animal and Veterinary Sciences (AL4AnimalS), 5000-801 Vila Real, Portugal
- Department of Animal Science, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
| | - Bruno Colaço
- Veterinary and Animal Research Centre (CECAV), University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Associate Laboratory for Animal and Veterinary Sciences (AL4AnimalS), 5000-801 Vila Real, Portugal
- Department of Animal Science, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
| | - Cátia Loureiro
- School of Science and Technology, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Department of Engineering, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
| | - Lio Gonçalves
- School of Science and Technology, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Department of Engineering, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Institute for Systems and Computer Engineering (INESC-TEC), Technology and Science, 4200-465 Porto, Portugal
| | - Vítor Filipe
- School of Science and Technology, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Department of Engineering, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Institute for Systems and Computer Engineering (INESC-TEC), Technology and Science, 4200-465 Porto, Portugal
| | - Mário Ginja
- Department of Veterinary Science, University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Veterinary and Animal Research Centre (CECAV), University of Trás-os-Montes and Alto Douro (UTAD), 5000-801 Vila Real, Portugal
- Associate Laboratory for Animal and Veterinary Sciences (AL4AnimalS), 5000-801 Vila Real, Portugal
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10
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Hespel AM, Zhang Y, Basran PS. Artificial intelligence 101 for veterinary diagnostic imaging. Vet Radiol Ultrasound 2022; 63 Suppl 1:817-827. [PMID: 36514230 DOI: 10.1111/vru.13160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Revised: 01/18/2022] [Accepted: 02/08/2022] [Indexed: 12/15/2022] Open
Abstract
The prevalence and pervasiveness of artificial intelligence (AI) with medical images in veterinary and human medicine is rapidly increasing. This article provides essential definitions of AI with medical images with a focus on veterinary radiology. Machine learning methods common in medical image analysis are compared, and a detailed description of convolutional neural networks commonly used in deep learning classification and regression models is provided. A brief introduction to natural language processing (NLP) and its utility in machine learning is also provided. NLP can economize the creation of "truth-data" needed when training AI systems for both diagnostic radiology and radiation oncology applications. The goal of this publication is to provide veterinarians, veterinary radiologists, and radiation oncologists the necessary background needed to understand and comprehend AI-focused research projects and publications.
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Affiliation(s)
- Adrien-Maxence Hespel
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
| | - Youshan Zhang
- Department of Clinical Sciences, Cornell University, Ithaca, New York, USA
| | - Parminder S Basran
- Department of Clinical Sciences, Cornell University, Ithaca, New York, USA
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11
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Hennessey E, DiFazio M, Hennessey R, Cassel N. Artificial intelligence in veterinary diagnostic imaging: A literature review. Vet Radiol Ultrasound 2022; 63 Suppl 1:851-870. [PMID: 36468206 DOI: 10.1111/vru.13163] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Revised: 05/05/2022] [Accepted: 07/07/2022] [Indexed: 12/09/2022] Open
Abstract
Artificial intelligence in veterinary medicine is an emerging field. Machine learning, a subfield of artificial intelligence, allows computer programs to analyze large imaging datasets and learn to perform tasks relevant to veterinary diagnostic imaging. This review summarizes the small, yet growing body of artificial intelligence literature in veterinary imaging, provides necessary background to understand these papers, and provides author commentary on the state of the field. To date, less than 40 peer-reviewed publications have utilized machine learning to perform imaging-associated tasks across multiple anatomic regions in veterinary clinical and biomedical research. Major challenges in this field include collection and cleaning of sufficient image data, selection of high-quality ground truth labels, formation of relationships between veterinary and machine learning professionals, and closure of the gap between academic uses of artificial intelligence and currently available commercial products. Further development of artificial intelligence has the potential to help meet the growing need for radiological services through applications in workflow, quality control, and image interpretation for both general practitioners and radiologists.
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Affiliation(s)
- Erin Hennessey
- Department of Clinical Sciences, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, USA.,Army Medical Department, Student Detachment, San Antonio, Texas, USA
| | - Matthew DiFazio
- Department of Clinical Sciences, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, USA
| | - Ryan Hennessey
- Department of Computer Science, College of Engineering, Kansas State University, Manhattan, Kansas, USA
| | - Nicky Cassel
- Department of Clinical Sciences, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, USA
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12
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A Review of Radiomics and Artificial Intelligence and Their Application in Veterinary Diagnostic Imaging. Vet Sci 2022; 9:vetsci9110620. [PMID: 36356097 PMCID: PMC9693121 DOI: 10.3390/vetsci9110620] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Revised: 10/31/2022] [Accepted: 10/31/2022] [Indexed: 11/09/2022] Open
Abstract
Simple Summary The goal of this paper is to provide an overview of current radiomic and AI applications in veterinary diagnostic imaging. We discuss the essential elements of AI for veterinary practitioners with the aim of helping them make informed decisions in applying AI technologies to their practices and that veterinarians will play an integral role in ensuring the appropriate uses and suitable curation of data. The expertise of veterinary professionals will be vital to ensuring suitable data and, subsequently, AI that meets the needs of the profession. Abstract Great advances have been made in human health care in the application of radiomics and artificial intelligence (AI) in a variety of areas, ranging from hospital management and virtual assistants to remote patient monitoring and medical diagnostics and imaging. To improve accuracy and reproducibility, there has been a recent move to integrate radiomics and AI as tools to assist clinical decision making and to incorporate it into routine clinical workflows and diagnosis. Although lagging behind human medicine, the use of radiomics and AI in veterinary diagnostic imaging is becoming more frequent with an increasing number of reported applications. The goal of this paper is to provide an overview of current radiomic and AI applications in veterinary diagnostic imaging.
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Dumortier L, Guépin F, Delignette-Muller ML, Boulocher C, Grenier T. Deep learning in veterinary medicine, an approach based on CNN to detect pulmonary abnormalities from lateral thoracic radiographs in cats. Sci Rep 2022; 12:11418. [PMID: 35794167 PMCID: PMC9258008 DOI: 10.1038/s41598-022-14993-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Accepted: 06/16/2022] [Indexed: 12/03/2022] Open
Abstract
Thoracic radiograph (TR) is a complementary exam widely used in small animal medicine which requires a sharp analysis to take full advantage of Radiographic Pulmonary Pattern (RPP). Although promising advances have been made in deep learning for veterinary imaging, the development of a Convolutional Neural Networks (CNN) to detect specifically RPP from feline TR images has not been investigated. Here, a CNN based on ResNet50V2 and pre-trained on ImageNet is first fine-tuned on human Chest X-rays and then fine-tuned again on 500 annotated TR images from the veterinary campus of VetAgro Sup (Lyon, France). The impact of manual segmentation of TR’s intrathoracic area and enhancing contrast method on the CNN’s performances has been compared. To improve classification performances, 200 networks were trained on random shuffles of training set and validation set. A voting approach over these 200 networks trained on segmented TR images produced the best classification performances and achieved mean Accuracy, F1-Score, Specificity, Positive Predictive Value and Sensitivity of 82%, 85%, 75%, 81% and 88% respectively on the test set. Finally, the classification schemes were discussed in the light of an ensemble method of class activation maps and confirmed that the proposed approach is helpful for veterinarians.
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Abstract
Artificial intelligence (AI) is a branch of computer science in which computer systems are designed to perform tasks that mimic human intelligence. Today, AI is reshaping day-to-day life and has numerous emerging medical applications poised to profoundly reshape the practice of veterinary medicine. In this Currents in One Health, we discuss the essential elements of AI for veterinary practitioners with the aim to help them make informed decisions in applying AI technologies into their practices. Veterinarians will play an integral role in ensuring the appropriate uses and good curation of data. The expertise of veterinary professionals will be vital to ensuring good data and, subsequently, AI that meets the needs of the profession. Readers interested in an in-depth description of AI and veterinary medicine are invited to explore a complementary manuscript of this Currents in One Health available in the May 2022 issue of the American Journal of Veterinary Research.
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Affiliation(s)
- Ryan B Appleby
- Department of Clinical Studies, Ontario Veterinary College, University of Guelph, Guelph, ON, Canada
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15
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Basran PS, Appleby RB. The unmet potential of artificial intelligence in veterinary medicine. Am J Vet Res 2022; 83:385-392. [PMID: 35353711 DOI: 10.2460/ajvr.22.03.0038] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Veterinary medicine is a broad and growing discipline that includes topics such as companion animal health, population medicine and zoonotic diseases, and agriculture. In this article, we provide insight on how artificial intelligence works and how it is currently applied in veterinary medicine. We also discuss its potential in veterinary medicine. Given the rapid pace of research and commercial product developments in this area, the next several years will pose challenges to understanding, interpreting, and adopting this powerful and evolving technology. Artificial intelligence has the potential to enable veterinarians to perform tasks more efficiently while providing new insights for the management and treatment of disorders. It is our hope that this will translate to better quality of life for animals and those who care for them.
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Affiliation(s)
- Parminder S Basran
- Department of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, NY
| | - Ryan B Appleby
- Department of Clinical Studies, Ontario Veterinary College, University of Guelph, Guelph, ON, Canada
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Adrien-Maxence H, Emilie B, Alois DLC, Michelle A, Kate A, Mylene A, David B, Marie DS, Jason F, Eric G, Séamus H, Kevin K, Alison L, Megan M, Hester M, Jaime RJ, Zhu X, Micaela Z, Federica M. Comparison of error rates between four pretrained DenseNet convolutional neural network models and 13 board-certified veterinary radiologists when evaluating 15 labels of canine thoracic radiographs. Vet Radiol Ultrasound 2022; 63:456-468. [PMID: 35137490 DOI: 10.1111/vru.13069] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Revised: 12/15/2021] [Accepted: 12/21/2021] [Indexed: 11/29/2022] Open
Abstract
Convolutional neural networks (CNNs) are commonly used as artificial intelligence (AI) tools for evaluating radiographs, but published studies testing their performance in veterinary patients are currently lacking. The purpose of this retrospective, secondary analysis, diagnostic accuracy study was to compare the error rates of four CNNs to the error rates of 13 veterinary radiologists for evaluating canine thoracic radiographs using an independent gold standard. Radiographs acquired at a referral institution were used to evaluate the four CNNs sharing a common architecture. Fifty radiographic studies were selected at random. The studies were evaluated independently by three board-certified veterinary radiologists for the presence or absence of 15 thoracic labels, thus creating the gold standard through the majority rule. The labels included "cardiovascular," "pulmonary," "pleural," "airway," and "other categories." The error rates for each of the CNNs and for 13 additional board-certified veterinary radiologists were calculated on those same studies. There was no statistical difference in the error rates among the four CNNs for the majority of the labels. However, the CNN's training method impacted the overall error rate for three of 15 labels. The veterinary radiologists had a statistically lower error rate than all four CNNs overall and for five labels (33%). There was only one label ("esophageal dilation") for which two CNNs were superior to the veterinary radiologists. Findings from the current study raise numerous questions that need to be addressed to further develop and standardize AI in the veterinary radiology environment and to optimize patient care.
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Affiliation(s)
- Hespel Adrien-Maxence
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
| | | | | | - Acierno Michelle
- Michelle Acierno Veterinary Radiology Consulting, Kirkland, WA and Summit Veterinary Referral Center, Tacoma, Washington, USA
| | - Alexander Kate
- DMV Veterinary Center, Diagnostic Imaging, Montreal, Quebec, Canada
| | | | - Biller David
- Kansas State University College of Veterinary Medicine, Clinical Sciences, Manhattan, Kansas, USA
| | | | | | - Green Eric
- The Ohio State University, Veterinary Clinical Sciences, Columbus, Ohio, USA
| | - Hoey Séamus
- University College Dublin, Veterinary Diagnostic Imaging, Dublin, Ireland
| | | | - Lee Alison
- Mississippi State University College of Veterinary Medicine, Department of Clinical Sciences, Starkville, Mississippi, USA
| | - MacLellan Megan
- BluePearl, Veterinary Partners, Elden Prairie, Minnesota, USA
| | - McAllister Hester
- University College Dublin, Veterinary Diagnostic Imaging, Dublin, Ireland
| | | | - Xiaojuan Zhu
- Office of Information Technology, The University of Tennessee, Knoxville, Tennessee, USA
| | | | - Morandi Federica
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
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Kim E, Fischetti AJ, Sreetharan P, Weltman JG, Fox PR. Comparison of artificial intelligence to the veterinary radiologist's diagnosis of canine cardiogenic pulmonary edema. Vet Radiol Ultrasound 2022; 63:292-297. [PMID: 35048445 DOI: 10.1111/vru.13062] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Revised: 12/08/2021] [Accepted: 12/08/2021] [Indexed: 11/29/2022] Open
Abstract
Application of artificial intelligence (AI) to improve clinical diagnosis is a burgeoning field in human and veterinary medicine. The objective of this prospective, diagnostic accuracy study was to determine the accuracy, sensitivity, and specificity of an AI-based software for diagnosing canine cardiogenic pulmonary edema from thoracic radiographs, using an American College of Veterinary Radiology-certified veterinary radiologist's interpretation as the reference standard. Five hundred consecutive canine thoracic radiographs made after-hours by a veterinary Emergency Department were retrieved. A total of 481 of 500 cases were technically analyzable. Based on the radiologist's assessment, 46 (10.4%) of these 481 dogs were diagnosed with cardiogenic pulmonary edema (CPE+). Of these cases, the AI software designated 42 of 46 as CPE+ and four of 46 as cardiogenic pulmonary edema negative (CPE-). Accuracy, sensitivity, and specificity of the AI-based software compared to radiologist diagnosis were 92.3%, 91.3%, and 92.4%, respectively (positive predictive value, 56%; negative predictive value, 99%). Findings supported using AI software screening for thoracic radiographs of dogs with suspected cardiogenic pulmonary edema to assist with short-term decision-making when a radiologist is unavailable.
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Affiliation(s)
- Eunbee Kim
- Department of Diagnostic Imaging, The Animal Medical Center, New York, New York, USA
| | - Anthony J Fischetti
- Department of Diagnostic Imaging, The Animal Medical Center, New York, New York, USA
| | | | - Joel G Weltman
- Department of Emergency and Critical Care, The Animal Medical Center, New York, New York, USA
| | - Philip R Fox
- Department of Cardiology, The Animal Medical Center, New York, New York, USA
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Schmid D, Scholz VB, Kircher PR, Lautenschlaeger IE. Employing deep convolutional neural networks for segmenting the medial retropharyngeal lymph nodes in CT studies of dogs. Vet Radiol Ultrasound 2022; 63:763-770. [PMID: 35877815 PMCID: PMC9796347 DOI: 10.1111/vru.13132] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Revised: 05/04/2022] [Accepted: 05/20/2022] [Indexed: 01/01/2023] Open
Abstract
While still in its infancy, the application of deep convolutional neural networks in veterinary diagnostic imaging is a rapidly growing field. The preferred deep learning architecture to be employed is convolutional neural networks, as these provide the structure preferably used for the analysis of medical images. With this retrospective exploratory study, the applicability of such networks for the task of delineating certain organs with respect to their surrounding tissues was tested. More precisely, a deep convolutional neural network was trained to segment medial retropharyngeal lymph nodes in a study dataset consisting of CT scans of canine heads. With a limited dataset of 40 patients, the network in conjunction with image augmentation techniques achieved an intersection-overunion of overall fair performance (median 39%, 25 percentiles at 22%, 75 percentiles at 51%). The results indicate that these architectures can indeed be trained to segment anatomic structures in anatomically complicated and breed-related variating areas such as the head, possibly even using just small training sets. As these conditions are quite common in veterinary medical imaging, all routines were published as an open-source Python package with the hope of simplifying future research projects in the community.
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Affiliation(s)
- David Schmid
- Clinic of Diagnostic ImagingVetsuisse FacultyUniversity of ZurichZurichSwitzerland
| | - Volkher B. Scholz
- Clinic of Diagnostic ImagingVetsuisse FacultyUniversity of ZurichZurichSwitzerland
| | - Patrick R. Kircher
- Clinic of Diagnostic ImagingVetsuisse FacultyUniversity of ZurichZurichSwitzerland
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Boissady E, De La Comble A, Zhu X, Abbott J, Adrien-Maxence H. Comparison of a Deep Learning Algorithm vs. Humans for Vertebral Heart Scale Measurements in Cats and Dogs Shows a High Degree of Agreement Among Readers. Front Vet Sci 2021; 8:764570. [PMID: 34957280 PMCID: PMC8695672 DOI: 10.3389/fvets.2021.764570] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Accepted: 10/26/2021] [Indexed: 11/13/2022] Open
Abstract
Heart disease is a leading cause of death among cats and dogs. Vertebral heart scale (VHS) is one tool to quantify radiographic cardiac enlargement and to predict the occurrence of congestive heart failure. The aim of this study was to evaluate the performance of artificial intelligence (AI) performing VHS measurements when compared with two board-certified specialists. Ground truth consisted of the average of constituent VHS measurements performed by board-certified specialists. Thirty canine and 30 feline thoracic lateral radiographs were evaluated by each operator, using two different methods for determination of the cardiac short axis on dogs' radiographs: the original approach published by Buchanan and the modified approach proposed by the EPIC trial authors, and only Buchanan's method for cats' radiographs. Overall, the VHS calculated by the AI, radiologist, and cardiologist had a high degree of agreement in both canine and feline patients (intraclass correlation coefficient (ICC) = 0.998). In canine patients, when comparing methods used to calculate VHS by specialists, there was also a high degree of agreement (ICC = 0.999). When evaluating specifically the results of the AI VHS vs. the two specialists' readings, the agreement was excellent for both canine (ICC = 0.998) and feline radiographs (ICC = 0.998). Performance of AI trained to locate VHS reference points agreed with manual calculation by specialists in both cats and dogs. Such a computer-aided technique might be an important asset for veterinarians in general practice to limit interobserver variability and obtain more comparable VHS reading over time.
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Affiliation(s)
| | | | - Xiajuan Zhu
- Office of Information Technology, The University of Tennessee, Knoxville, Knoxville, TN, United States
| | - Jonathan Abbott
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Knoxville, TN, United States
| | - Hespel Adrien-Maxence
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Knoxville, TN, United States
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Lembersky Z, de Swarte M, Aisa J, Johnson K, Zhu X, Hespel AM. Repeatability and accuracy of a novel, quantitative radiographic method for differentiating normal canine sacroiliac joints from joints with subluxation or luxation: Pilot study. Vet Radiol Ultrasound 2021; 63:148-155. [PMID: 34870358 DOI: 10.1111/vru.13045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 08/23/2021] [Accepted: 08/30/2021] [Indexed: 11/30/2022] Open
Abstract
Canine sacroiliac (SI) joint subluxation or luxation is most commonly diagnosed based on qualitative radiographic assessments. Aims of this two-part, retrospective, diagnostic accuracy, pilot study were to develop and evaluate a novel quantitative method based on measuring the angle between a line connecting the iliac wings and parallel lines across three anatomical landmarks (cranial endplate of L7, caudal endplate of L6, cranial endplate of L6) on a single ventrodorsal radiograph. For the first part of the study, angle measurements from a single observer were compared for 20 normal canine pelvic radiographs and 20 pelvic radiographs with SI luxation or subluxation. Mean values significantly differed between datasets (P < 0.001). The angles for the normal pelves ranged from 0.6° to 1.5°, while abnormal angles ranged from 3.8° to 7.1°. For the second part of the study, a dataset of 25 normal and 25 abnormal canine pelvic radiographs was evaluated using the novel technique by three blinded readers with varying levels of expertise at two different time points. There was excellent reliability among the three readers with an intraclass correlation (ICC) value of 0.90 and an excellent agreement between day 0 and day 30 readings with an ICC value of 0.91. It was also determined that a cut-off angle of 2.0°, using the line parallel to the cranial endplate of L6, provided overall the best accuracy, sensitivity, and specificity to differentiate normal versus abnormal pelves. These findings may be helpful for clinical cases with equivocal diagnoses and for future development of automated diagnostic tools.
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Affiliation(s)
- Zachary Lembersky
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
| | - Marie de Swarte
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
| | - Josep Aisa
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
| | - Kryssa Johnson
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
| | - Xiaojuan Zhu
- Office of Information Technology, The University of Tennessee, Knoxville, Tennessee, USA
| | - Adrien-Maxence Hespel
- Department of Small Animal Clinical Sciences, University of Tennessee, Knoxville, Tennessee, USA
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21
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Biercher A, Meller S, Wendt J, Caspari N, Schmidt-Mosig J, De Decker S, Volk HA. Using Deep Learning to Detect Spinal Cord Diseases on Thoracolumbar Magnetic Resonance Images of Dogs. Front Vet Sci 2021; 8:721167. [PMID: 34796224 PMCID: PMC8593183 DOI: 10.3389/fvets.2021.721167] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2021] [Accepted: 10/08/2021] [Indexed: 12/12/2022] Open
Abstract
Deep Learning based Convolutional Neural Networks (CNNs) are the state-of-the-art machine learning technique with medical image data. They have the ability to process large amounts of data and learn image features directly from the raw data. Based on their training, these networks are ultimately able to classify unknown data and make predictions. Magnetic resonance imaging (MRI) is the imaging modality of choice for many spinal cord disorders. Proper interpretation requires time and expertise from radiologists, so there is great interest in using artificial intelligence to more quickly interpret and diagnose medical imaging data. In this study, a CNN was trained and tested using thoracolumbar MR images from 500 dogs. T1- and T2-weighted MR images in sagittal and transverse planes were used. The network was trained with unremarkable images as well as with images showing the following spinal cord pathologies: intervertebral disc extrusion (IVDE), intervertebral disc protrusion (IVDP), fibrocartilaginous embolism (FCE)/acute non-compressive nucleus pulposus extrusion (ANNPE), syringomyelia and neoplasia. 2,693 MR images from 375 dogs were used for network training. The network was tested using 7,695 MR images from 125 dogs. The network performed best in detecting IVDPs on sagittal T1-weighted images, with a sensitivity of 100% and specificity of 95.1%. The network also performed very well in detecting IVDEs, especially on sagittal T2-weighted images, with a sensitivity of 90.8% and specificity of 98.98%. The network detected FCEs and ANNPEs with a sensitivity of 62.22% and a specificity of 97.90% on sagittal T2-weighted images and with a sensitivity of 91% and a specificity of 90% on transverse T2-weighted images. In detecting neoplasms and syringomyelia, the CNN did not perform well because of insufficient training data or because the network had problems differentiating different hyperintensities on T2-weighted images and thus made incorrect predictions. This study has shown that it is possible to train a CNN in terms of recognizing and differentiating various spinal cord pathologies on canine MR images. CNNs therefore have great potential to act as a “second eye” for imagers in the future, providing a faster focus on the altered image area and thus increasing workflow in radiology.
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Affiliation(s)
- Anika Biercher
- Department of Small Animal Medicine and Surgery, University of Veterinary Medicine, Hannover, Germany
| | - Sebastian Meller
- Department of Small Animal Medicine and Surgery, University of Veterinary Medicine, Hannover, Germany
| | - Jakob Wendt
- Caspari, Schmidt-Mosig u. Wendt-vetvise GbR, Hannover, Germany
| | - Norman Caspari
- Caspari, Schmidt-Mosig u. Wendt-vetvise GbR, Hannover, Germany
| | | | - Steven De Decker
- Department of Clinical Science and Services, Royal Veterinary College, London, United Kingdom
| | - Holger Andreas Volk
- Department of Small Animal Medicine and Surgery, University of Veterinary Medicine, Hannover, Germany
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Banzato T, Wodzinski M, Tauceri F, Donà C, Scavazza F, Müller H, Zotti A. An AI-Based Algorithm for the Automatic Classification of Thoracic Radiographs in Cats. Front Vet Sci 2021; 8:731936. [PMID: 34722699 PMCID: PMC8554083 DOI: 10.3389/fvets.2021.731936] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Accepted: 09/21/2021] [Indexed: 01/31/2023] Open
Abstract
An artificial intelligence (AI)-based computer-aided detection (CAD) algorithm to detect some of the most common radiographic findings in the feline thorax was developed and tested. The database used for training comprised radiographs acquired at two different institutions. Only correctly exposed and positioned radiographs were included in the database used for training. The presence of several radiographic findings was recorded. Consequenly, the radiographic findings included for training were: no findings, bronchial pattern, pleural effusion, mass, alveolar pattern, pneumothorax, cardiomegaly. Multi-label convolutional neural networks (CNNs) were used to develop the CAD algorithm, and the performance of two different CNN architectures, ResNet 50 and Inception V3, was compared. Both architectures had an area under the receiver operating characteristic curve (AUC) above 0.9 for alveolar pattern, bronchial pattern and pleural effusion, an AUC above 0.8 for no findings and pneumothorax, and an AUC above 0.7 for cardiomegaly. The AUC for mass was low (above 0.5) for both architectures. No significant differences were evident in the diagnostic accuracy of either architecture.
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Affiliation(s)
- Tommaso Banzato
- Department of Animal Medicine, Production and Health, University of Padua, Legnaro, Italy
| | - Marek Wodzinski
- Department of Measurement and Electronics, AGH University of Science and Technology, Krakow, Poland.,Information Systems Institute, University of Applied Sciences - Western Switzerland (HES-SO Valais), Sierre, Switzerland
| | - Federico Tauceri
- Department of Animal Medicine, Production and Health, University of Padua, Legnaro, Italy
| | - Chiara Donà
- Department of Animal Medicine, Production and Health, University of Padua, Legnaro, Italy
| | - Filippo Scavazza
- Department of Animal Medicine, Production and Health, University of Padua, Legnaro, Italy
| | - Henning Müller
- Information Systems Institute, University of Applied Sciences - Western Switzerland (HES-SO Valais), Sierre, Switzerland
| | - Alessandro Zotti
- Department of Animal Medicine, Production and Health, University of Padua, Legnaro, Italy
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Imaging the Equine Foot. Vet Clin North Am Equine Pract 2021; 37:563-579. [PMID: 34674912 DOI: 10.1016/j.cveq.2021.07.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Over the past 5 years, advancements in diagnostic imaging technology have led to improvement of radiographic technique and development of standing computed tomography (CT) and PET-CT scanners. Although these modalities are in their initial stages of development and clinical applications, they are meant to revolutionize the diagnosis and management of diseases of the foot in the standing patient, in particular detecting subclinical lesions, and the establishment of computer-assisted surgical suits. This article also reviews the improved radiographic projections of the equine foot and benefits of high-field and contrast magnetic resonance imaging (MRI) in diagnosis of cartilage and ligamentous pathologies.
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