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Al-Temeemy AA. The Methodology of Adaptive Levels of Interval for Laser Speckle Imaging. J Imaging 2024; 10:289. [PMID: 39590753 PMCID: PMC11595354 DOI: 10.3390/jimaging10110289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2024] [Revised: 11/01/2024] [Accepted: 11/06/2024] [Indexed: 11/28/2024] Open
Abstract
A methodology is proposed for use in the laser speckle imaging field. This methodology modified the graphical and numerical speckle pattern imaging methods to improve their extraction and discrimination capabilities when processing the embedded temporal activity in the images of laser speckle patterns. This is through enabling these methods to adapt the levels of speckle images' interval during processing to speed up the process and overcome the lack of discrimination when they deal with a complex scattering medium having regions of various scales of activity. The impact of using the new methodology on the imaging methods' performance was evaluated using graphical and numerical evaluation tests, in addition, an exceptional laser speckle imaging system was designed and implemented to undertake a series of experimental validation tests on this methodology. The evaluation and experimental validation tests show the effectiveness of this methodology on the extraction and discrimination capabilities for the standard imaging speckle pattern methods and prove its ability to provide high performance with the real images of speckle patterns. The results also show an improvement in the processing speed for both graphical and numerical methods when the adaptive levels methodology is applied to them, which reaches 78% for the graphical and 87% for the numerical speckle processing methods.
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Affiliation(s)
- Ali A. Al-Temeemy
- Laser and Optoelectronics Engineering Department, College of Engineering, Al-Nahrain University, Baghdad 64040, Iraq; or
- Electrical Engineering and Electronics Department, Faculty of Science and Engineering, University of Liverpool, Liverpool L69 3GJ, UK
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2
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Qureshi MM, Allam N, Im J, Kwon HS, Chung E, Vitkin IA. Advances in laser speckle imaging: From qualitative to quantitative hemodynamic assessment. JOURNAL OF BIOPHOTONICS 2024; 17:e202300126. [PMID: 37545037 DOI: 10.1002/jbio.202300126] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Revised: 07/03/2023] [Accepted: 07/27/2023] [Indexed: 08/08/2023]
Abstract
Laser speckle imaging (LSI) techniques have emerged as a promising method for visualizing functional blood vessels and tissue perfusion by analyzing the speckle patterns generated by coherent light interacting with living biological tissue. These patterns carry important biophysical tissue information including blood flow dynamics. The noninvasive, label-free, and wide-field attributes along with relatively simple instrumental schematics make it an appealing imaging modality in preclinical and clinical applications. The review outlines the fundamentals of speckle physics and the three categories of LSI techniques based on their degree of quantification: qualitative, semi-quantitative and quantitative. Qualitative LSI produces microvascular maps by capturing speckle contrast variations between blood vessels containing moving red blood cells and the surrounding static tissue. Semi-quantitative techniques provide a more accurate analysis of blood flow dynamics by accounting for the effect of static scattering on spatiotemporal parameters. Quantitative LSI such as optical speckle image velocimetry provides quantitative flow velocity measurements, which is inspired by the particle image velocimetry in fluid mechanics. Additionally, discussions regarding the prospects of future innovations in LSI techniques for optimizing the vascular flow quantification with associated clinical outlook are presented.
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Affiliation(s)
- Muhammad Mohsin Qureshi
- Division of Biophysics and Bioimaging, Princess Margaret Cancer Centre, University Health Network, Toronto, Canada
| | - Nader Allam
- Division of Biophysics and Bioimaging, Princess Margaret Cancer Centre, University Health Network, Toronto, Canada
- Department of Medical Biophysics, University of Toronto, Toronto, Canada
| | - Jeongmyo Im
- Department of Biomedical Science and Engineering, Gwangju Institute of Science and Technology, Gwangju, Republic of Korea
| | - Hyuk-Sang Kwon
- Department of Biomedical Science and Engineering, Gwangju Institute of Science and Technology, Gwangju, Republic of Korea
| | - Euiheon Chung
- Department of Biomedical Science and Engineering, Gwangju Institute of Science and Technology, Gwangju, Republic of Korea
- AI Graduate School, Gwangju Institute of Science and Technology, Gwangju, Republic of Korea
| | - I Alex Vitkin
- Division of Biophysics and Bioimaging, Princess Margaret Cancer Centre, University Health Network, Toronto, Canada
- Department of Medical Biophysics, University of Toronto, Toronto, Canada
- Department of Radiation Oncology, University of Toronto, Toronto, Canada
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3
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Liu HL, Yuan Y, Han L, Bi Y, Yu WY, Yu Y. Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging. JOURNAL OF BIOMEDICAL OPTICS 2024; 29:016009. [PMID: 38283936 PMCID: PMC10821768 DOI: 10.1117/1.jbo.29.1.016009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 01/04/2024] [Accepted: 01/08/2024] [Indexed: 01/30/2024]
Abstract
Significance Laser speckle contrast imaging (LSCI) is a real-time wide-field technique that is applied to visualize blood flow in biomedical applications. However, there is currently a lack of relevant research to demonstrate that it can measure velocities over a wide dynamic range (WDR), which is critical for monitoring much higher and more pulsatile blood flow in larger size myocardial vessels, such as the coronary artery bypass graft, and visualizing the spatio-temporal evolution of myocardial blood flow perfusion in cardiac surgery. Aim We aim to demonstrate that the LSCI technique enables measuring velocities over a WDR from phantom experiments to animal experiments. In addition, LSCI is preliminarily applied to imaging myocardial blood flow distribution in vivo on rabbits. Approach Phantom and animal experiments are performed to verify that the LSCI method has the ability to measure blood velocities over a wide range. Our method is also validated by transit time flow measurement, which is the gold standard for blood flow measurement in cardiac surgery. Results Our method is demonstrated to measure the blood flow over a wide range from 0.2 to 635 mm / s . To validate the phantom results, the varying blood flow rate from 0 to 320 mm / s is detected in the rat carotid artery. Additionally, our technique also obtains blood flow maps of different myocardial vessels, such as superficial large/small veins, veins surrounded by fat, and myocardial deeper arteriole. Conclusions Our study has the potential to visualize the spatio-temporal evolution of myocardial perfusion in coronary artery bypass grafting, which would be of great benefit for future research in the life sciences and clinical medicine.
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Affiliation(s)
- Hong Li Liu
- Beijing Anzhen Hospital of Capital Medical University, Department of Cardiovascular Surgery, Beijing, China
| | - Yuan Yuan
- Chinese Academy of Sciences, Technical Institute of Physics and Chemistry, Center of Applied Laser, Beijing, China
| | - Li Han
- Chinese Academy of Sciences, Technical Institute of Physics and Chemistry, Center of Applied Laser, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Yong Bi
- Chinese Academy of Sciences, Technical Institute of Physics and Chemistry, Center of Applied Laser, Beijing, China
| | - Wen Yuan Yu
- Beijing Anzhen Hospital of Capital Medical University, Department of Cardiovascular Surgery, Beijing, China
| | - Yang Yu
- Beijing Anzhen Hospital of Capital Medical University, Department of Cardiovascular Surgery, Beijing, China
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Raj R, Firoz Khan M, Shariq M, Ahsan N, Singh R, Kumar Basoya P. Point-of-care optical devices in clinical imaging and screening: A review on the state of the art. JOURNAL OF BIOPHOTONICS 2023; 16:e202200386. [PMID: 36906735 DOI: 10.1002/jbio.202200386] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 02/07/2023] [Accepted: 03/09/2023] [Indexed: 06/07/2023]
Abstract
Integration of optical technologies in biomedical sciences permitted light manipulation at smaller time-length scales for specific detection and imaging of biological entities. Similarly, advances in consumer electronics and wireless telecommunications strengthened the development of affordable and portable point-of-care (POC) optical devices, circumventing the necessity of conventional clinical analyses by trained personnel. However, many of the POC optical technologies translated from bench to bedside require industrial support for their commercialization and dissemination to the population. This review aims to demonstrate the intriguing progress and challenges of emerging POC devices utilizing optics for clinical imaging (depth-resolved and perfusion imaging) and screening (infections, cancer, cardiac health, and haematologic disorders) with a focus on research studies over the previous 3 years. Special attention is given to POC optical devices that can be utilized in resource-constrained environments.
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Affiliation(s)
- Reshmi Raj
- Division of Quantum Biophotonics, QuantLase Laboratory, Abu Dhabi, United Arab Emirates
| | - Mohammad Firoz Khan
- Division of Quantum Biophotonics, QuantLase Laboratory, Abu Dhabi, United Arab Emirates
| | - Mohd Shariq
- Division of Quantum Biophotonics, QuantLase Laboratory, Abu Dhabi, United Arab Emirates
| | - Nuzhat Ahsan
- Division of Quantum Biophotonics, QuantLase Laboratory, Abu Dhabi, United Arab Emirates
| | - Rinky Singh
- Division of Quantum Biophotonics, QuantLase Laboratory, Abu Dhabi, United Arab Emirates
| | - Pramod Kumar Basoya
- Division of Quantum Biophotonics, QuantLase Laboratory, Abu Dhabi, United Arab Emirates
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Chizari A, Tsong W, Knop T, Steenbergen W. Prediction of motion artifacts caused by translation in handheld laser speckle contrast imaging. JOURNAL OF BIOMEDICAL OPTICS 2023; 28:046005. [PMID: 37082096 PMCID: PMC10112282 DOI: 10.1117/1.jbo.28.4.046005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Accepted: 03/24/2023] [Indexed: 05/03/2023]
Abstract
Significance In handheld laser speckle contrast imaging (LSCI), motion artifacts (MA) are inevitable. Suppression of MA leads to a valid and objective assessment of tissue perfusion in a wide range of medical applications including dermatology and burns. Our study shines light on the sources of these artifacts, which have not yet been explored. We propose a model based on optical Doppler effect to predict speckle contrast drop as an indication of MA. Aim We aim to theoretically model MA when an LSCI system measuring on static scattering media is subject to translational displacements. We validate the model using both simulation and experiments. This is the crucial first step toward creating robustness against MA. Approach Our model calculates optical Doppler shifts in order to predict intensity correlation function and contrast of the time-integrated intensity as functions of applied speed based on illumination and detection wavevectors. To validate the theoretical predictions, computer simulation of the dynamic speckles has been carried out. Then experiments are performed by both high-speed and low-framerate imaging. The employed samples for the experiments are a highly scattering matte surface and a Delrin plate of finite scattering level in which volume scattering occurs. Results An agreement has been found between theoretical prediction, simulation, and experimental results of both intensity correlation functions and speckle contrast. Coefficients in the proposed model have been linked to the physical parameters according to the experimental setups. Conclusions The proposed model provides a quantitative description of the influence of the types of illumination and media in the creation of MA. The accurate prediction of MA caused by translation based on Doppler shifts makes our model suitable to study the influence of rotation. Also the model can be extended for the case of dynamic media, such as live tissue.
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Affiliation(s)
- Ata Chizari
- University of Twente, Technical Medical Centre, Faculty of Science and Technology, Biomedical Photonic Imaging Group, Enschede, The Netherlands
- Address all correspondence to Ata Chizari,
| | - Wilson Tsong
- University of Twente, Technical Medical Centre, Faculty of Science and Technology, Biomedical Photonic Imaging Group, Enschede, The Netherlands
| | - Tom Knop
- University of Twente, Technical Medical Centre, Faculty of Science and Technology, Biomedical Photonic Imaging Group, Enschede, The Netherlands
| | - Wiendelt Steenbergen
- University of Twente, Technical Medical Centre, Faculty of Science and Technology, Biomedical Photonic Imaging Group, Enschede, The Netherlands
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6
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Chizari A, Knop T, Sirmacek B, van der Heijden F, Steenbergen W. Exploration of movement artefacts in handheld laser speckle contrast perfusion imaging. BIOMEDICAL OPTICS EXPRESS 2020; 11:2352-2365. [PMID: 32499928 PMCID: PMC7249814 DOI: 10.1364/boe.387252] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2020] [Revised: 03/20/2020] [Accepted: 03/30/2020] [Indexed: 05/19/2023]
Abstract
Functional performance of handheld laser speckle contrast imaging (LSCI) is compromised by movement artefacts. Here we quantify the movements of a handheld LSCI system employing electromagnetic (EM) tracking and measure the applied translational, tilt and on-surface laser beam speeds. By observing speckle contrast on static objects, the magnitudes of translation and tilt of wavefronts are explored for various scattering levels of the objects. We conclude that for tissue mimicking static phantoms, on-surface speeds play a dominant role to wavefront tilt speed in creation of movement artefacts. The ratio depends on the optical properties of the phantom. Furthermore, with the same applied speed, the drop in the speckle contrast increases with decreasing reduced scattering coefficient, and hence the related movement artefact increases.
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Affiliation(s)
- Ata Chizari
- University of Twente, Biomedical Photonic Imaging, Technical Medical Centre, Faculty of Science and Technology, Enschede, P.O. Box 217, 7500 AE, The Netherlands
| | - Tom Knop
- University of Twente, Biomedical Photonic Imaging, Technical Medical Centre, Faculty of Science and Technology, Enschede, P.O. Box 217, 7500 AE, The Netherlands
| | - Beril Sirmacek
- University of Twente, Robotics and Mechatronics, Technical Medical Centre, Faculty of Electrical Engineering, Mathematics and Computer Science, Enschede, P.O. Box 217, 7500 AE, The Netherlands
| | - Ferdinand van der Heijden
- University of Twente, Robotics and Mechatronics, Technical Medical Centre, Faculty of Electrical Engineering, Mathematics and Computer Science, Enschede, P.O. Box 217, 7500 AE, The Netherlands
| | - Wiendelt Steenbergen
- University of Twente, Biomedical Photonic Imaging, Technical Medical Centre, Faculty of Science and Technology, Enschede, P.O. Box 217, 7500 AE, The Netherlands
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Optical study of laser biospeckle activity in leaves of Jatropha curcas L.: a non-invasive and indirect assessment of foliar endophyte colonization. Mycol Prog 2020. [DOI: 10.1007/s11557-020-01563-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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8
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Bloygrund H, Franjy-Tal Y, Rosenzweig T, Abookasis D. Multiparameter wide-field integrated optical imaging system-based spatially modulated illumination and laser speckles in model of tissue injuries. JOURNAL OF BIOPHOTONICS 2019; 12:e201900141. [PMID: 31187933 DOI: 10.1002/jbio.201900141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2019] [Revised: 06/03/2019] [Accepted: 06/07/2019] [Indexed: 06/09/2023]
Abstract
In this report, an integrated optical platform based on spatial illumination together with laser speckle contrast technique was utilized to measure multiple parameters in live tissue including absorption, scattering, saturation, composition, metabolism, and blood flow. Measurements in three models of tissue injury including drug toxicity, artery occlusion, and acute hyperglycemia were used to test the efficacy of this system. With this hybrid apparatus, a series of structured light patterns at low and high spatial frequencies are projected onto the tissue surface and diffuse reflected light is captured by a CCD camera. A six position filter wheel, equipped with four bandpass filters centered at wavelengths of 650, 690, 800 and 880 nm is placed in front of the camera. Then, light patterns are blocked and a laser source at 650 nm illuminates the tissue while the diffusely reflected light is captured by the camera through the two remaining open holes in the wheel. In this manner, near-infrared (NIR) and laser speckle images are captured and stored together in the computer for off-line processing to reconstruct the tissue's properties. Spatial patterns are used to differentiate the effects of tissue scattering from those of absorption, allowing accurate quantification of tissue hemodynamics and morphology, while a coherent light source is used to study blood flow changes, a feature which cannot be measured with the NIR structured light. This combined configuration utilizes the strengths of each system in a complementary way, thus collecting a larger range of sample properties. In addition, once the flow and hemodynamics are measured, tissue oxygen metabolism can be calculated, a property which cannot be measured independently. Therefore, this merged platform can be considered a multiparameter wide-field imaging and spectroscopy modality. Overall, experiments demonstrate the capability of this spatially coregistered imaging setup to provide complementary, useful information of various tissue metrics in a simple and noncontact manner, making it attractive for use in a variety of biomedical applications.
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Affiliation(s)
- Hadas Bloygrund
- Department of Electrical and Electronics Engineering, Ariel University, Ariel, Israel
| | - Yarden Franjy-Tal
- Department of Electrical and Electronics Engineering, Ariel University, Ariel, Israel
| | - Tovit Rosenzweig
- Department of Molecular Biology and Nutritional Studies, Ariel University, Ariel, Israel
| | - David Abookasis
- Department of Electrical and Electronics Engineering, Ariel University, Ariel, Israel
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9
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B A, Rao S, Pandya HJ. Engineering approaches for characterizing soft tissue mechanical properties: A review. Clin Biomech (Bristol, Avon) 2019; 69:127-140. [PMID: 31344655 DOI: 10.1016/j.clinbiomech.2019.07.016] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/31/2018] [Revised: 03/14/2019] [Accepted: 07/15/2019] [Indexed: 02/07/2023]
Abstract
From cancer diagnosis to detailed characterization of arterial wall biomechanics, the elastic property of tissues is widely studied as an early sign of disease onset. The fibrous structural features of tissues are a direct measure of its health and functionality. Alterations in the structural features of tissues are often manifested as local stiffening and are early signs for diagnosing a disease. These elastic properties are measured ex vivo in conventional mechanical testing regimes, however, the heterogeneous microstructure of tissues can be accurately resolved over relatively smaller length scales with enhanced spatial resolution using techniques such as micro-indentation, microelectromechanical (MEMS) based cantilever sensors and optical catheters which also facilitate in vivo assessment of mechanical properties. In this review, we describe several probing strategies (qualitative and quantitative) based on the spatial scale of mechanical assessment and also discuss the potential use of machine learning techniques to compute the mechanical properties of soft tissues. This work details state of the art advancement in probing strategies, associated challenges toward quantitative characterization of tissue biomechanics both from an engineering and clinical standpoint.
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Affiliation(s)
- Alekya B
- Biomedical and Electronic (10(-6)-10(-9)) Engineering Systems Laboratory, Department of Electronic Systems Engineering, Indian Institute of Science, Bangalore 12, India
| | - Sanjay Rao
- Department of Pediatric Surgery, Mazumdar Shaw Multispecialty Hospital, Narayana Health, Bangalore 99, India
| | - Hardik J Pandya
- Biomedical and Electronic (10(-6)-10(-9)) Engineering Systems Laboratory, Department of Electronic Systems Engineering, Indian Institute of Science, Bangalore 12, India.
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Lertsakdadet B, Dunn C, Bahani A, Crouzet C, Choi B. Handheld motion stabilized laser speckle imaging. BIOMEDICAL OPTICS EXPRESS 2019; 10:5149-5158. [PMID: 31646037 PMCID: PMC6788584 DOI: 10.1364/boe.10.005149] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2019] [Revised: 07/31/2019] [Accepted: 09/03/2019] [Indexed: 05/19/2023]
Abstract
Laser speckle imaging (LSI) is a wide-field, noninvasive optical technique that allows researchers and clinicians to quantify blood flow in a variety of applications. However, traditional LSI devices are cart or tripod based mounted systems that are bulky and potentially difficult to maneuver in a clinical setting. We previously showed that the use of a handheld LSI device with the use of a fiducial marker (FM) to account for motion artifact is a viable alternative to mounted systems. Here we incorporated a handheld gimbal stabilizer (HGS) to produce a motion stabilized LSI (msLSI) device to further improve the quality of data acquired in handheld configurations. We evaluated the msLSI device in vitro using flow phantom experiments and in vivo using a dorsal window chamber model. For in vitro experiments, we quantified the speckle contrast of the FM (KFM) using the mounted data set and tested 80% and 85% of KFM as thresholds for useable images (KFM,Mounted,80% and KFM,Mounted,85%). Handheld data sets using the msLSI device (stabilized handheld) and handheld data sets without the HGS (handheld) were collected. Using KFM,Mounted,80% and KFM,Mounted,85% as the threshold, the number of images above the threshold for stabilized handheld (38 ± 7 and 10 ± 2) was significantly greater (p = 0.031) than for handheld operation (16 ± 2 and 4 ± 1). We quantified a region of interest within the flow region (KFLOW), which led to a percent difference of 8.5% ± 2.9% and 7.8% ± 3.1% between stabilized handheld and handheld configurations at each threshold. For in vivo experiments, we quantified the speckle contrast of the window chamber (KWC) using the mounted data set and tested 80% of KWC (KWC,Mounted,80%). Stabilized handheld operation provided 53 ± 24 images above KWC,Mounted,80%, while handheld operation provided only 23 ± 13 images. We quantified the speckle flow index (SFI) of the vessels and the background to calculate a signal-to-background ratio (SBR) of the window chamber. Stabilized handheld operation provided a greater SBR (2.32 ± 0.29) compared to handheld operation (1.83 ± 0.21). Both the number of images above threshold and SBR were statistically significantly greater in the stabilized handheld data sets (p = 0.0312). These results display the improved usability of handheld data acquired with an msLSI device.
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Affiliation(s)
- Ben Lertsakdadet
- Beckman Laser Institute and Medical Clinic, University of California-Irvine, 1002 Health Sciences Road East, Irvine, CA 92612, USA
- Department of Biomedical Engineering, University of California, Irvine, 3120 Natural Sciences II, Irvine, CA 92697, USA
| | - Cody Dunn
- Beckman Laser Institute and Medical Clinic, University of California-Irvine, 1002 Health Sciences Road East, Irvine, CA 92612, USA
- Department of Biomedical Engineering, University of California, Irvine, 3120 Natural Sciences II, Irvine, CA 92697, USA
- Edwards Lifesciences Center for Advanced Cardiovascular Technology, University of California, Irvine, 2400 Engineering Hall, Irvine, CA 92697, USA
| | - Adrian Bahani
- Beckman Laser Institute and Medical Clinic, University of California-Irvine, 1002 Health Sciences Road East, Irvine, CA 92612, USA
- Department of Biomedical Engineering, University of California, Irvine, 3120 Natural Sciences II, Irvine, CA 92697, USA
| | - Christian Crouzet
- Beckman Laser Institute and Medical Clinic, University of California-Irvine, 1002 Health Sciences Road East, Irvine, CA 92612, USA
- Department of Biomedical Engineering, University of California, Irvine, 3120 Natural Sciences II, Irvine, CA 92697, USA
| | - Bernard Choi
- Beckman Laser Institute and Medical Clinic, University of California-Irvine, 1002 Health Sciences Road East, Irvine, CA 92612, USA
- Department of Biomedical Engineering, University of California, Irvine, 3120 Natural Sciences II, Irvine, CA 92697, USA
- Edwards Lifesciences Center for Advanced Cardiovascular Technology, University of California, Irvine, 2400 Engineering Hall, Irvine, CA 92697, USA
- Department of Surgery, University of California, Irvine, 333 City Boulevard West, Suite 1600, Orange, CA 92868, USA
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11
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Buijs J, Gucht JVD, Sprakel J. Fourier transforms for fast and quantitative Laser Speckle Imaging. Sci Rep 2019; 9:13279. [PMID: 31527699 PMCID: PMC6746788 DOI: 10.1038/s41598-019-49570-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Accepted: 08/28/2019] [Indexed: 11/19/2022] Open
Abstract
Laser speckle imaging is a powerful imaging technique that visualizes microscopic motion within turbid materials. At current two methods are widely used to analyze speckle data: one is fast but qualitative, the other quantitative but computationally expensive. We have developed a new processing algorithm based on the fast Fourier transform, which converts raw speckle patterns into maps of microscopic motion and is both fast and quantitative, providing a dynamnic spectrum of the material over a frequency range spanning several decades. In this article we show how to apply this algorithm and how to measure a diffusion coefficient with it. We show that this method is quantitative and several orders of magnitude faster than the existing quantitative method. Finally we harness the potential of this new approach by constructing a portable laser speckle imaging setup that performs quantitative data processing in real-time on a tablet.
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Affiliation(s)
- J Buijs
- Physical Chemistry and Soft Matter, Wageningen University & Research, Stippeneng 4, 6708WE, Wageningen, The Netherlands
| | - J van der Gucht
- Physical Chemistry and Soft Matter, Wageningen University & Research, Stippeneng 4, 6708WE, Wageningen, The Netherlands
| | - J Sprakel
- Physical Chemistry and Soft Matter, Wageningen University & Research, Stippeneng 4, 6708WE, Wageningen, The Netherlands.
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12
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Chen H, Miao P, Bo B, Li Y, Tong S. A prototype system of portable laser speckle imager based on embedded graphics processing unit platform. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2019; 2019:3919-3922. [PMID: 31946729 DOI: 10.1109/embc.2019.8857273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Laser speckle contrast imaging (LSCI) is a high-resolution full-field optical technique for measuring blood flow, which has been widely used in clinical and biomedical research. However, most of the current LSCI instruments are bulky, limiting their application settings. In this work, we proposed a prototype system of portable laser speckle imager. Different from the desktop laser speckle systems that utilize personal computer (PC), our system was designed with embedded GPU system (Jetson TX2, NVIDIA, USA) and a LCD touch screen (16.5 × 12.4 cm in size, 380 g in weight). In-vivo experiments showed that the portable GPU-based system had comparable performance with our laboratory LSCI system. Such a portable LSCI imager could be potentially used in a situation that requires for easy operation and installation, such as intraoperative monitoring or bedside diagnosis.
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13
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Hendrikx D, Smits A, Lavanga M, De Wel O, Thewissen L, Jansen K, Caicedo A, Van Huffel S, Naulaers G. Measurement of Neurovascular Coupling in Neonates. Front Physiol 2019; 10:65. [PMID: 30833901 PMCID: PMC6387909 DOI: 10.3389/fphys.2019.00065] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2018] [Accepted: 01/21/2019] [Indexed: 01/01/2023] Open
Abstract
Neurovascular coupling refers to the mechanism that links the transient neural activity to the subsequent change in cerebral blood flow, which is regulated by both chemical signals and mechanical effects. Recent studies suggest that neurovascular coupling in neonates and preterm born infants is different compared to adults. The hemodynamic response after a stimulus is later and less pronounced and the stimulus might even result in a negative (hypoxic) signal. In addition, studies both in animals and neonates confirm the presence of a short hypoxic period after a stimulus in preterm infants. In clinical practice, different methodologies exist to study neurovascular coupling. The combination of functional magnetic resonance imaging or functional near-infrared spectroscopy (brain hemodynamics) with EEG (brain function) is most commonly used in neonates. Especially near-infrared spectroscopy is of interest, since it is a non-invasive method that can be integrated easily in clinical care and is able to provide results concerning longer periods of time. Therefore, near-infrared spectroscopy can be used to develop a continuous non-invasive measurement system, that could be used to study neonates in different clinical settings, or neonates with different pathologies. The main challenge for the development of a continuous marker for neurovascular coupling is how the coupling between the signals can be described. In practice, a wide range of signal interaction measures exist. Moreover, biomedical signals often operate on different time scales. In a more general setting, other variables also have to be taken into account, such as oxygen saturation, carbon dioxide and blood pressure in order to describe neurovascular coupling in a concise manner. Recently, new mathematical techniques were developed to give an answer to these questions. This review discusses these recent developments.
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Affiliation(s)
- Dries Hendrikx
- Department of Electrical Engineering, KU Leuven, Leuven, Belgium
- imec, Leuven, Belgium
| | - Anne Smits
- Department of Development and Regeneration, KU Leuven, Leuven, Belgium
- Neonatal Intensive Care Unit, University Hospitals Leuven, Leuven, Belgium
| | - Mario Lavanga
- Department of Electrical Engineering, KU Leuven, Leuven, Belgium
- imec, Leuven, Belgium
| | - Ofelie De Wel
- Department of Electrical Engineering, KU Leuven, Leuven, Belgium
- imec, Leuven, Belgium
| | - Liesbeth Thewissen
- Department of Development and Regeneration, KU Leuven, Leuven, Belgium
- Neonatal Intensive Care Unit, University Hospitals Leuven, Leuven, Belgium
| | - Katrien Jansen
- Department of Development and Regeneration, KU Leuven, Leuven, Belgium
- Neonatal Intensive Care Unit, University Hospitals Leuven, Leuven, Belgium
- Child Neurology, University Hospitals Leuven, Leuven, Belgium
| | - Alexander Caicedo
- Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Bogotá, Colombia
| | - Sabine Van Huffel
- Department of Electrical Engineering, KU Leuven, Leuven, Belgium
- imec, Leuven, Belgium
| | - Gunnar Naulaers
- Department of Development and Regeneration, KU Leuven, Leuven, Belgium
- Neonatal Intensive Care Unit, University Hospitals Leuven, Leuven, Belgium
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14
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Remer I, Pierre-Destine LF, Tay D, Golightly LM, Bilenca A. In vivo noninvasive visualization of retinal perfusion dysfunction in murine cerebral malaria by camera-phone laser speckle imaging. JOURNAL OF BIOPHOTONICS 2019; 12:e201800098. [PMID: 29900690 DOI: 10.1002/jbio.201800098] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2018] [Revised: 06/08/2018] [Accepted: 06/11/2018] [Indexed: 05/12/2023]
Abstract
Cerebral malaria (CM) is a severe complication of Plasmodium falciparum infection associated with impaired cerebral blood flow. Visualization of the eye vasculature, which is embryologically derived from that of the brain, is used clinically to diagnose the syndrome. Here, we introduce camera-phone laser speckle imaging as a new tool for in vivo, noncontact two-dimensional mapping of blood flow dynamics in the experimental cerebral malaria (ECM) murine model of Plasmodium berghei ANKA. In a longitudinal study, we show that the camera-phone imager can detect an overall decrease in the retinal blood-flow-speed (BFS) as ECM develops in P. berghei ANKA infected mice, with no similar change observed in uninfected control mice or mice infected with a non-ECM inducing strain (P. berghei NK65). Furthermore, by analyzing relative alterations in the BFS of individual retinal vessels during the progression of ECM, we illustrate the strength of our imager in identifying different BFS-change heterogeneities in the retinas of ECM and uninfected mice. The technique creates new possibilities for objective investigations into the diagnosis and pathogenesis of CM noninvasively through the eye. The camera-phone laser speckle imager along with measured spatial blood perfusion maps of the retina of a mouse infected with P. berghei ANKA-a fatal ECM model-on different days during the progression of the infection (top, day 3 after infection; middle, day 5 after infection; and bottom, day 7 after infection).
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Affiliation(s)
- Itay Remer
- Biomedical Engineering Department, Ben-Gurion University of the Negev, Beersheba, Israel
| | | | - David Tay
- Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York
| | - Linnie M Golightly
- Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York
| | - Alberto Bilenca
- Biomedical Engineering Department, Ben-Gurion University of the Negev, Beersheba, Israel
- Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beersheba, Israel
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15
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Ringuette D, Nauenberg J, Monnier PP, Carlen PL, Levi O. Data compression and improved registration for laser speckle contrast imaging of rodent brains. BIOMEDICAL OPTICS EXPRESS 2018; 9:5615-5634. [PMID: 30460150 PMCID: PMC6238931 DOI: 10.1364/boe.9.005615] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Revised: 08/30/2018] [Accepted: 09/13/2018] [Indexed: 05/16/2023]
Abstract
Single-frame blood flow maps from laser speckle contrast imaging (LSCI) contain high spatiotemporal variation that obscures high spatial-frequency vascular features, making precise image registration for signal amplification challenging. In this work, novel bivariate standardized moment filters (BSMFs) were used to provide stable measures of vessel edge location, permitting more robust LSCI registration. Relatedly, BSMFs enabled the stable reconstruction of vessel edges from sparsely distributed blood flow map outliers, which were found to retain most of the temporal dynamics. Consequently, data discarding and BSMF-based reconstruction enable efficient real-time quantitative LSCI data compression. Smaller LSCI-kernels produced log-normal blood flow distributions, enhancing sparse-to-dense inference.
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Affiliation(s)
- Dene Ringuette
- The Institute of Biomaterials and Biomedical Engineering, University of Toronto, 164 College Street, Toronto, Ontario, M5S 3G9,
Canada
- Division of Fundamental Neurobiology, Toronto Western Research Institute, 60 Leonard Ave, Toronto, Ontario M5T 2S8,
Canada
| | - Jacob Nauenberg
- The Edward S. Rogers Sr. Department of Electrical and Computer Engineering, University of Toronto, 10 King’s College Road, Toronto, Ontario, M5S 3G4,
Canada
| | - Philippe P. Monnier
- Division of Fundamental Neurobiology, Toronto Western Research Institute, 60 Leonard Ave, Toronto, Ontario M5T 2S8,
Canada
| | - Peter L. Carlen
- The Institute of Biomaterials and Biomedical Engineering, University of Toronto, 164 College Street, Toronto, Ontario, M5S 3G9,
Canada
- Division of Fundamental Neurobiology, Toronto Western Research Institute, 60 Leonard Ave, Toronto, Ontario M5T 2S8,
Canada
| | - Ofer Levi
- The Institute of Biomaterials and Biomedical Engineering, University of Toronto, 164 College Street, Toronto, Ontario, M5S 3G9,
Canada
- The Edward S. Rogers Sr. Department of Electrical and Computer Engineering, University of Toronto, 10 King’s College Road, Toronto, Ontario, M5S 3G4,
Canada
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16
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Lertsakdadet B, Yang BY, Dunn CE, Ponticorvo A, Crouzet C, Bernal N, Durkin AJ, Choi B. Correcting for motion artifact in handheld laser speckle images. JOURNAL OF BIOMEDICAL OPTICS 2018; 23:1-7. [PMID: 29546735 PMCID: PMC5852319 DOI: 10.1117/1.jbo.23.3.036006] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Accepted: 02/21/2018] [Indexed: 05/03/2023]
Abstract
Laser speckle imaging (LSI) is a wide-field optical technique that enables superficial blood flow quantification. LSI is normally performed in a mounted configuration to decrease the likelihood of motion artifact. However, mounted LSI systems are cumbersome and difficult to transport quickly in a clinical setting for which portability is essential in providing bedside patient care. To address this issue, we created a handheld LSI device using scientific grade components. To account for motion artifact of the LSI device used in a handheld setup, we incorporated a fiducial marker (FM) into our imaging protocol and determined the difference between highest and lowest speckle contrast values for the FM within each data set (Kbest and Kworst). The difference between Kbest and Kworst in mounted and handheld setups was 8% and 52%, respectively, thereby reinforcing the need for motion artifact quantification. When using a threshold FM speckle contrast value (KFM) to identify a subset of images with an acceptable level of motion artifact, mounted and handheld LSI measurements of speckle contrast of a flow region (KFLOW) in in vitro flow phantom experiments differed by 8%. Without the use of the FM, mounted and handheld KFLOW values differed by 20%. To further validate our handheld LSI device, we compared mounted and handheld data from an in vivo porcine burn model of superficial and full thickness burns. The speckle contrast within the burn region (KBURN) of the mounted and handheld LSI data differed by <4 % when accounting for motion artifact using the FM, which is less than the speckle contrast difference between superficial and full thickness burns. Collectively, our results suggest the potential of handheld LSI with an FM as a suitable alternative to mounted LSI, especially in challenging clinical settings with space limitations such as the intensive care unit.
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Affiliation(s)
- Ben Lertsakdadet
- Beckman Laser Institute and Medical Clinic, Irvine, California, United States
- University of California, Department of Biomedical Engineering, Irvine, California, United States
- University of California, Irvine, California, United States
| | - Bruce Y. Yang
- Beckman Laser Institute and Medical Clinic, Irvine, California, United States
- University of California, Irvine, California, United States
| | - Cody E. Dunn
- Beckman Laser Institute and Medical Clinic, Irvine, California, United States
- University of California, Department of Biomedical Engineering, Irvine, California, United States
- University of California, Irvine, California, United States
| | - Adrien Ponticorvo
- Beckman Laser Institute and Medical Clinic, Irvine, California, United States
- University of California, Irvine, California, United States
| | - Christian Crouzet
- Beckman Laser Institute and Medical Clinic, Irvine, California, United States
- University of California, Department of Biomedical Engineering, Irvine, California, United States
- University of California, Irvine, California, United States
| | - Nicole Bernal
- University of California, Irvine, California, United States
- University of California, Department of Surgery, Irvine, California, United States
| | - Anthony J. Durkin
- Beckman Laser Institute and Medical Clinic, Irvine, California, United States
- University of California, Department of Biomedical Engineering, Irvine, California, United States
- University of California, Irvine, California, United States
| | - Bernard Choi
- Beckman Laser Institute and Medical Clinic, Irvine, California, United States
- University of California, Department of Biomedical Engineering, Irvine, California, United States
- University of California, Irvine, California, United States
- Address all correspondence to: Bernard Choi, E-mail:
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17
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Regan C, White SM, Yang BY, Takesh T, Ho J, Wink C, Wilder-Smith P, Choi B. Design and evaluation of a miniature laser speckle imaging device to assess gingival health. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:104002. [PMID: 27787545 PMCID: PMC5081569 DOI: 10.1117/1.jbo.21.10.104002] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2016] [Accepted: 10/03/2016] [Indexed: 05/10/2023]
Abstract
Current methods used to assess gingivitis are qualitative and subjective. We hypothesized that gingival perfusion measurements could provide a quantitative metric of disease severity. We constructed a compact laser speckle imaging (LSI) system that could be mounted in custom-made oral molds. Rigid fixation of the LSI system in the oral cavity enabled measurement of blood flow in the gingiva. In vitro validation performed in controlled flow phantoms demonstrated that the compact LSI system had comparable accuracy and linearity compared to a conventional bench-top LSI setup. In vivo validation demonstrated that the compact LSI system was capable of measuring expected blood flow dynamics during a standard postocclusive reactive hyperemia and that the compact LSI system could be used to measure gingival blood flow repeatedly without significant variation in measured blood flow values (p<0.05). Finally, compact LSI system measurements were collected from the interdental papilla of nine subjects and compared to a clinical assessment of gingival bleeding on probing. A statistically significant correlation (?=0.53; p<0.005) was found between these variables, indicating that quantitative gingival perfusion measurements performed using our system may aid in the diagnosis and prognosis of periodontal disease.
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Affiliation(s)
- Caitlin Regan
- University of California, Irvine, Department of Biomedical Engineering, 3120 Natural Sciences II, Irvine, California 92697, United States
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road East, Irvine, California 92612, United States
| | - Sean M. White
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road East, Irvine, California 92612, United States
| | - Bruce Y. Yang
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road East, Irvine, California 92612, United States
| | - Thair Takesh
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road East, Irvine, California 92612, United States
| | - Jessica Ho
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road East, Irvine, California 92612, United States
| | - Cherie Wink
- Concorde Career College, 12951 Euclid Street, Garden Grove, California 92840, United States
| | - Petra Wilder-Smith
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road East, Irvine, California 92612, United States
- University of California, Irvine Medical Center, Department of Surgery, 333 City Boulevard West, Suite 700, Orange, California 92868, United States
| | - Bernard Choi
- University of California, Irvine, Department of Biomedical Engineering, 3120 Natural Sciences II, Irvine, California 92697, United States
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road East, Irvine, California 92612, United States
- University of California, Irvine Medical Center, Department of Surgery, 333 City Boulevard West, Suite 700, Orange, California 92868, United States
- University of California, Irvine, Edwards Lifesciences Center for Advanced Cardiovascular Technology, 2400 Engineering Hall, Irvine, California 92697, United States
- CHOC Children’s Hospital, 1201 West La Veta Avenue, Orange, California 92868, United States
- Address all correspondence to: Bernard Choi, E-mail:
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