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Browning CM, Mayes S, Deal J, Arshad A, Mayes SG, Parker M, Rich TC, Leavesley SJ. Sensitivity analysis of a multibranched light guide for real time hyperspectral imaging systems. PROCEEDINGS OF SPIE--THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING 2019; 10871. [PMID: 34092891 DOI: 10.1117/12.2510506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Academic Contribution Register] [Indexed: 11/14/2022]
Abstract
Hyperspectral imaging (HSI) is a spectroscopic technique which captures images at a high contrast over a wide range of wavelengths to show pixel specific composition. Traditional uses of HSI include: satellite imagery, food distribution quality control and digital archaeological reconstruction. Our lab has focused on developing applications of HSI fluorescence imaging systems to study molecule-specific detection for rapid cell signaling events or real-time endoscopic screening. Previously, we have developed a prototype spectral light source, using our modified imaging technique, excitation-scanning hyperspectral imaging (HIFEX), coupled to a commercial colonoscope for feasibility testing. The 16 wavelength LED array was combined, using a multi-branched solid light guide, to couple to the scope's optical input. The prototype acquired a spectral scan at near video-rate speeds (∼8 fps). The prototype could operate at very rapid wavelength switch speeds, limited to the on/off rates of the LEDs (∼10 μs), but imaging speed was limited due to optical transmission losses (∼98%) through the solid light guide. Here we present a continuation of our previous work in performing an in-depth analysis of the solid light guide to optimize the optical intensity throughput. The parameters evaluated include: LED intensity input, geometry (branch curvature and combination) and light propagation using outer claddings. Simulations were conducted using a Monte Carlo ray tracing software (TracePro). Results show that transmission within the branched light guide may be optimized through LED focusing lenses, bend radii and smooth tangential branch merges. Future work will test a new fabricated light guide from the optimized model framework.
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Affiliation(s)
- Craig M Browning
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688.,Systems Engineering, University of South Alabama, AL 36688
| | - Samuel Mayes
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688.,Systems Engineering, University of South Alabama, AL 36688
| | - Joshua Deal
- Pharmacology, University of South Alabama, AL 36688.,Center for Lung Biology, University of South Alabama, AL 36688
| | - Arslan Arshad
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688
| | - Samantha Gunn Mayes
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688
| | - Marina Parker
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688.,Systems Engineering, University of South Alabama, AL 36688
| | - Thomas C Rich
- Pharmacology, University of South Alabama, AL 36688.,Center for Lung Biology, University of South Alabama, AL 36688
| | - Silas J Leavesley
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688.,Pharmacology, University of South Alabama, AL 36688.,Center for Lung Biology, University of South Alabama, AL 36688
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Browning CM, Mayes S, Rich TC, Leavesley SJ. Endoscopic hyperspectral imaging: light guide optimization for spectral light source. PROCEEDINGS OF SPIE--THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING 2018; 10487:104870H. [PMID: 34092888 PMCID: PMC8176564 DOI: 10.1117/12.2290615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Academic Contribution Register] [Indexed: 11/14/2022]
Abstract
Hyperspectral imaging (HSI) is a technology used in remote sensing, food processing and documentation recovery. Recently, this approach has been applied in the medical field to spectrally interrogate regions of interest within respective substrates. In spectral imaging, a two (spatial) dimensional image is collected, at many different (spectral) wavelengths, to sample spectral signatures from different regions and/or components within a sample. Here, we report on the use of hyperspectral imaging for endoscopic applications. Colorectal cancer is the 3rd leading cancer for incidences and deaths in the US. One factor of severity is the miss rate of precancerous/flat lesions (~65% accuracy). Integrating HSI into colonoscopy procedures could minimize misdiagnosis and unnecessary resections. We have previously reported a working prototype light source with 16 high-powered light emitting diodes (LEDs) capable of high speed cycling and imaging. In recent testing, we have found our current prototype is limited by transmission loss (~99%) through the multi-furcated solid light guide (lightpipe) and the desired framerate (20-30 fps) could not be achieved. Here, we report on a series of experimental and modeling studies to better optimize the lightpipe and the spectral endoscopy system as a whole. The lightpipe was experimentally evaluated using an integrating sphere and spectrometer (Ocean Optics). Modeling the lightpipe was performed using Monte Carlo optical ray tracing in TracePro (Lambda Research Corp.). Results of these optimization studies will aid in manufacturing a revised prototype with the newly designed light guide and increased sensitivity. Once the desired optical output (5-10 mW) is achieved then the HIS endoscope system will be able to be implemented without adding onto the procedure time.
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Affiliation(s)
- Craig M Browning
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688
- Systems Engineering, University of South Alabama, AL 36688
| | - Samuel Mayes
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688
- Systems Engineering, University of South Alabama, AL 36688
| | - Thomas C Rich
- Pharmacology, University of South Alabama, AL 36688
- Center for Lung Biology, University of South Alabama, AL 36688
| | - Silas J Leavesley
- Chemical and Biomolecular Engineering, University of South Alabama, AL 36688
- Pharmacology, University of South Alabama, AL 36688
- Center for Lung Biology, University of South Alabama, AL 36688
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Deal J, Favreau PF, Lopez C, Lall M, Weber DS, Rich TC, Leavesley SJ. Excitation-Scanning Hyperspectral Imaging as a Means to Discriminate Various Tissues Types. PROCEEDINGS OF SPIE--THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING 2017; 10068:1006816. [PMID: 34092886 PMCID: PMC8173709 DOI: 10.1117/12.2251682] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Academic Contribution Register] [Indexed: 11/14/2022]
Abstract
Little is currently known about the fluorescence excitation spectra of disparate tissues and how these spectra change with pathological state. Current imaging diagnostic techniques have limited capacity to investigate fluorescence excitation spectral characteristics. This study utilized excitation-scanning hyperspectral imaging to perform a comprehensive assessment of fluorescence spectral signatures of various tissues. Immediately following tissue harvest, a custom inverted microscope (TE-2000, Nikon Instruments) with Xe arc lamp and thin film tunable filter array (VersaChrome, Semrock, Inc.) were used to acquire hyperspectral image data from each sample. Scans utilized excitation wavelengths from 340 nm to 550 nm in 5 nm increments. Hyperspectral images were analyzed with custom Matlab scripts including linear spectral unmixing (LSU), principal component analysis (PCA), and Gaussian mixture modeling (GMM). Spectra were examined for potential characteristic features such as consistent intensity peaks at specific wavelengths or intensity ratios among significant wavelengths. The resultant spectral features were conserved among tissues of similar molecular composition. Additionally, excitation spectra appear to be a mixture of pure endmembers with commonalities across tissues of varied molecular composition, potentially identifiable through GMM. These results suggest the presence of common autofluorescent molecules in most tissues and that excitation-scanning hyperspectral imaging may serve as an approach for characterizing tissue composition as well as pathologic state. Future work will test the feasibility of excitation-scanning hyperspectral imaging as a contrast mode for discriminating normal and pathological tissues.
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Affiliation(s)
- Joshua Deal
- Chemical & Biomolecular Engineering, University of South Alabama
- Center for Lung Biology, University of South Alabama
| | - Peter F Favreau
- Medical Engineering, Morgridge Institute for Research, University of Wisconsin
| | - Carmen Lopez
- College of Medicine, University of South Alabama
| | - Malvika Lall
- Department of Biomedical Sciences, University of South Alabama
| | - David S Weber
- Physiology & Cell Biology, University of South Alabama
| | - Thomas C Rich
- Center for Lung Biology, University of South Alabama
- Pharmacology, University of South Alabama
| | - Silas J Leavesley
- Chemical & Biomolecular Engineering, University of South Alabama
- Center for Lung Biology, University of South Alabama
- Pharmacology, University of South Alabama
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