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Tinglan L, Jun Q, Guihe Q, Weili S, Wentao Z. Liver segmentation network based on detail enhancement and multi-scale feature fusion. Sci Rep 2025; 15:683. [PMID: 39753603 PMCID: PMC11699127 DOI: 10.1038/s41598-024-78917-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2024] [Accepted: 11/05/2024] [Indexed: 01/06/2025] Open
Abstract
Due to the low contrast of abdominal CT (Computer Tomography) images and the similar color and shape of the liver to other organs such as the spleen, stomach, and kidneys, liver segmentation presents significant challenges. Additionally, 2D CT images obtained from different angles (such as sagittal, coronal, and transverse planes) increase the diversity of liver morphology and the complexity of segmentation. To address these issues, this paper proposes a Detail Enhanced Convolution (DE Conv) to improve liver feature learning and thereby enhance liver segmentation performance. Furthermore, to enable the model to better learn liver features at different scales, a Multi-Scale Feature Fusion module (MSFF) is added to the skip connections in the model. The MSFF module enhances the capture of global features, thus improving the accuracy of the liver segmentation model. Through the aforementioned research, this paper proposes a liver segmentation network based on detail enhancement and multi-scale feature fusion (DEMF-Net). We conducted extensive experiments on the LiTS17 dataset, and the results demonstrate that the DEMF-Net model achieved significant improvements across various evaluation metrics. Therefore, the proposed DEMF-Net model can achieve precise liver segmentation.
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Affiliation(s)
- Lu Tinglan
- Changchun University of Science and Technology, Changchun, China
| | - Qin Jun
- Changchun University of Science and Technology, Changchun, China.
| | | | - Shi Weili
- Changchun University of Science and Technology, Changchun, China
| | - Zhang Wentao
- Zhongshan Institute of Changchun University of Science and Technology, Changchun, China
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Guo H, Liu H, Zhu H, Li M, Yu H, Zhu Y, Chen X, Xu Y, Gao L, Zhang Q, Shentu Y. Exploring a novel HE image segmentation technique for glioblastoma: A hybrid slime mould and differential evolution approach. Comput Biol Med 2024; 168:107653. [PMID: 37984200 DOI: 10.1016/j.compbiomed.2023.107653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2023] [Revised: 10/12/2023] [Accepted: 10/31/2023] [Indexed: 11/22/2023]
Abstract
Glioblastoma is a primary brain tumor with high incidence and mortality rates, posing a significant threat to human health. It is crucial to provide necessary diagnostic assistance for its management. Among them, Multi-threshold Image Segmentation (MIS) is considered the most efficient and intuitive method in image processing. In recent years, many scholars have combined different metaheuristic algorithms with MIS to improve the quality of Image Segmentation (IS). Slime Mould Algorithm (SMA) is a metaheuristic approach inspired by the foraging behavior of slime mould populations in nature. In this investigation, we introduce a hybridized variant named BDSMA, aimed at overcoming the inherent limitations of the original algorithm. These limitations encompass inadequate exploitation capacity and a tendency to converge prematurely towards local optima when dealing with complex multidimensional problems. To bolster the algorithm's optimization prowess, we integrate the original algorithm with a robust exploitative operator called Differential Evolution (DE). Additionally, we introduce a strategy for handling solutions that surpass boundaries. The incorporation of an advanced cooperative mixing model accelerates the convergence of BDSMA, refining its precision and preventing it from becoming trapped in local optima. To substantiate the effectiveness of our proposed approach, we conduct a comprehensive series of comparative experiments involving 30 benchmark functions. The results of these experiments demonstrate the superiority of our method in terms of both convergence speed and precision. Moreover, within this study, we propose a MIS technique. This technique is subsequently employed to conduct experiments on IS at both low and high threshold levels. The effectiveness of the BDSMA-based MIS technique is further showcased through its successful application to the medical image of brain glioblastoma. The evaluation of these experimental outcomes, utilizing image quality metrics, conclusively underscores the exceptional efficacy of the algorithm we have put forth.
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Affiliation(s)
- Hongliang Guo
- College of Information Technology, Jilin Agricultural University, Changchun 130118, China.
| | - Hanbo Liu
- College of Information Technology, Jilin Agricultural University, Changchun 130118, China.
| | - Hong Zhu
- Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China.
| | - Mingyang Li
- College of Information Technology, Jilin Agricultural University, Changchun 130118, China.
| | - Helong Yu
- College of Information Technology, Jilin Agricultural University, Changchun 130118, China.
| | - Yun Zhu
- Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China.
| | - Xiaoxiao Chen
- Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China.
| | - Yujia Xu
- Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China.
| | - Lianxing Gao
- College of Engineering and Technology, Jilin Agricultural University, Changchun 130118, China.
| | - Qiongying Zhang
- Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China.
| | - Yangping Shentu
- Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China.
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Zhu W, Fang L, Ye X, Medani M, Escorcia-Gutierrez J. IDRM: Brain tumor image segmentation with boosted RIME optimization. Comput Biol Med 2023; 166:107551. [PMID: 37832284 DOI: 10.1016/j.compbiomed.2023.107551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 09/13/2023] [Accepted: 09/28/2023] [Indexed: 10/15/2023]
Abstract
Timely diagnosis of medical conditions can significantly mitigate the risks they pose to human life. Consequently, there is an urgent demand for an effective auxiliary model that assists physicians in accurately diagnosing medical conditions based on imaging data. While multi-threshold image segmentation models have garnered considerable attention due to their simplicity and ease of implementation, the selection of threshold combinations greatly influences the segmentation performance. Traditional optimization algorithms often require substantial time to address multi-threshold image segmentation problems, and their segmentation accuracy is frequently unsatisfactory. As a result, metaheuristic algorithms have been employed in this domain. However, several algorithms suffer from drawbacks such as premature convergence and inadequate exploration of the solution space when it comes to threshold selection. For instance, the recently proposed optimization algorithm RIME, inspired by the physical phenomenon of rime-ice, falls short in terms of avoiding local optima and fully exploring the solution space. Therefore, this study introduces an enhanced version of RIME, called IDRM, which incorporates an interactive mechanism and Gaussian diffusion strategy. The interactive mechanism facilitates information exchange among agents, enabling them to evolve towards more promising directions and increasing the likelihood of discovering the optimal solution. Additionally, the Gaussian diffusion strategy enhances the agents' local exploration capabilities and expands their search within the solution space, effectively preventing them from becoming trapped in local optima. Experimental results on 30 benchmark test functions demonstrate that IDRM exhibits favorable optimization performance across various optimization functions, showcasing its robustness and convergence properties. Furthermore, the algorithm is applied to select threshold combinations for brain tumor image segmentation, and the results are evaluated using metrics such as Peak Signal-to-Noise Ratio (PSNR) and Structural Similarity Index Measure (SSIM). The overall findings consistently highlight the exceptional performance of this approach, further validating the effectiveness of IDRM in addressing image segmentation problems.
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Affiliation(s)
- Wei Zhu
- School of Resources and Safety Engineering, Central South University, Changsha, 410083, China.
| | - Liming Fang
- School of Humanities and Communication, Zhejiang Gongshang University, Hangzhou, 310000, China.
| | - Xia Ye
- School of the 1st Clinical Medical Sciences(School of Information and Engineering), Wenzhou Medical University, Wenzhou, 325000, China.
| | - Mohamed Medani
- Department of Computer Science, College of Science and Art at Mahayil, King Khalid University, Muhayil Aseer, 62529, Saudi Arabia.
| | - José Escorcia-Gutierrez
- Department of Computational Science and Electronics, Universidad de la Costa, CUC, Barranquilla, 080002, Colombia.
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Hou L, Li R, Mafarja M, Heidari AA, Liu L, Jin C, Zhou S, Chen H, Cai Z, Li C. Image segmentation of Intracerebral hemorrhage patients based on enhanced hunger Games search Optimizer. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2022.104511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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Zhao S, Wang P, Heidari AA, Zhao X, Chen H. Boosted crow search algorithm for handling multi-threshold image problems with application to X-ray images of COVID-19. EXPERT SYSTEMS WITH APPLICATIONS 2023; 213:119095. [PMID: 36313263 PMCID: PMC9595503 DOI: 10.1016/j.eswa.2022.119095] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Revised: 10/11/2022] [Accepted: 10/18/2022] [Indexed: 06/16/2023]
Abstract
COVID-19 is pervasive and threatens the safety of people around the world. Therefore, now, a method is needed to diagnose COVID-19 accurately. The identification of COVID-19 by X-ray images is a common method. The target area is extracted from the X-ray images by image segmentation to improve classification efficiency and help doctors make a diagnosis. In this paper, we propose an improved crow search algorithm (CSA) based on variable neighborhood descent (VND) and information exchange mutation (IEM) strategies, called VMCSA. The original CSA quickly falls into the local optimum, and the possibility of finding the best solution is significantly reduced. Therefore, to help the algorithm avoid falling into local optimality and improve the global search capability of the algorithm, we introduce VND and IEM into CSA. Comparative experiments are conducted at CEC2014 and CEC'21 to demonstrate the better performance of the proposed algorithm in optimization. We also apply the proposed algorithm to multi-level thresholding image segmentation using Renyi's entropy as the objective function to find the optimal threshold, where we construct 2-D histograms with grayscale images and non-local mean images and maximize the Renyi's entropy on top of the 2-D histogram. The proposed segmentation method is evaluated on X-ray images of COVID-19 and compared with some algorithms. VMCSA has a significant advantage in segmentation results and obtains better robustness than other algorithms. The available extra info can be found at https://github.com/1234zsw/VMCSA.
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Affiliation(s)
- Songwei Zhao
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang 325035, China
| | - Pengjun Wang
- College of Electrical and Electronic Engineering, Wenzhou University, Wenzhou 325035, China
| | - Ali Asghar Heidari
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang 325035, China
- School of Surveying and Geospatial Engineering, College of Engineering, University of Tehran, Tehran, Iran
| | - Xuehua Zhao
- School of Digital Media, Shenzhen Institute of Information Technology, Shenzhen 518172, China
| | - Huiling Chen
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang 325035, China
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Yuan D, Zhang D, Yang Y, Yang S. Automatic construction of filter tree by genetic programming for ultrasound guidance image segmentation. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103641] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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7
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A method for eliminating the disturbance of pseudo-textural-direction in ultrasound image feature extraction. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103176] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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8
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Zhao S, Wang P, Heidari AA, Chen H, He W, Xu S. Performance optimization of salp swarm algorithm for multi-threshold image segmentation: Comprehensive study of breast cancer microscopy. Comput Biol Med 2021; 139:105015. [PMID: 34800808 DOI: 10.1016/j.compbiomed.2021.105015] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Revised: 11/01/2021] [Accepted: 11/01/2021] [Indexed: 11/30/2022]
Abstract
Multi-threshold image segmentation (MIS) is now a well known image segmentation technique, and many researchers have applied intelligent algorithms to it, but these methods suffer from local optimal drawbacks. This paper presented a novel approach to improve the Salp Swarm Algorithm (SSA), namely EHSSA, and applied it to MIS. Knowing the inaccuracies and discussions on implementation of this method, a new efficient mechanism is proposed to improve global search capability of the algorithm and avoid falling into a local optimum. Moreover, the excellence of the proposed algorithm was proved by comparative experiments at IEEE CEC2014. Afterward, the performance of EHSSA was demonstrated by testing a set of images selected from the Berkeley segmentation data set 500 (BSDS500), and the experimental results were analyzed by evaluating the parameters, which proved the efficiency of the proposed algorithm in MIS. Furthermore, EHSSA was applied to the microscopic image segmentation of breast cancer. Medical image segmentation is the study of how to quickly extract objects of interest (human organs) from various images to perform qualitative and quantitative analysis of diseased tissues and improve the accuracy of their diagnosis, which assists the physician in making more informed decisions and patient rehabilitation. The results of this set of experiments also proved its superior performance. For any info about this paper, readers can refer to https://aliasgharheidari.com.
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Affiliation(s)
- Songwei Zhao
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China.
| | - Pengjun Wang
- College of Electrical and Electronic Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Ali Asghar Heidari
- School of Surveying and Geospatial Engineering, College of Engineering, University of Tehran, Tehran, Iran.
| | - Huiling Chen
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China.
| | - Wenming He
- The Affiliated Hospital of Medical School, Ningbo University, Ningbo, 315020, China.
| | - Suling Xu
- The Affiliated Hospital of Medical School, Ningbo University, Ningbo, 315020, China.
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Zhao S, Wang P, Heidari AA, Chen H, Turabieh H, Mafarja M, Li C. Multilevel threshold image segmentation with diffusion association slime mould algorithm and Renyi's entropy for chronic obstructive pulmonary disease. Comput Biol Med 2021; 134:104427. [PMID: 34020128 DOI: 10.1016/j.compbiomed.2021.104427] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Revised: 04/16/2021] [Accepted: 04/20/2021] [Indexed: 01/11/2023]
Abstract
Image segmentation is an essential pre-processing step and is an indispensable part of image analysis. This paper proposes Renyi's entropy multi-threshold image segmentation based on an improved Slime Mould Algorithm (DASMA). First, we introduce the diffusion mechanism (DM) into the original SMA to increase the population's diversity so that the variants can better avoid falling into local optima. The association strategy (AS) is then added to help the algorithm find the optimal solution faster. Finally, the proposed algorithm is applied to Renyi's entropy multilevel threshold image segmentation based on non-local means 2D histogram. The proposed method's effectiveness is demonstrated on the Berkeley segmentation dataset and benchmark (BSD) by comparing it with some well-known algorithms. The DASMA-based multilevel threshold segmentation technique is also successfully applied to the CT image segmentation of chronic obstructive pulmonary disease (COPD). The experimental results are evaluated by image quality metrics, which show the proposed algorithm's extraordinary performance. This means that it can help doctors analyze the lesion tissue qualitatively and quantitatively, improve its diagnostic accuracy and make the right treatment plan. The supplementary material and info about this article will be available at https://aliasgharheidari.com.
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Affiliation(s)
- Songwei Zhao
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China.
| | - Pengjun Wang
- College of Electrical and Electronic Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Ali Asghar Heidari
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China; Department of Computer Science, School of Computing, National University of Singapore, Singapore.
| | - Huiling Chen
- College of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, Zhejiang, 325035, China.
| | - Hamza Turabieh
- Department of Information Technology, College of Computers and Information Technology, P.O. Box11099, Taif, 21944, Taif University, Taif, Saudi Arabia.
| | - Majdi Mafarja
- Department of Computer Science, Birzeit University, Birzeit 72439, Palestine.
| | - Chengye Li
- Department of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, China.
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3D Shape-Weighted Level Set Method for Breast MRI 3D Tumor Segmentation. JOURNAL OF HEALTHCARE ENGINEERING 2018; 2018:7097498. [PMID: 30008992 PMCID: PMC6020458 DOI: 10.1155/2018/7097498] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/23/2017] [Accepted: 04/30/2018] [Indexed: 11/23/2022]
Abstract
Three-dimensional (3D) medical image segmentation is used to segment the target (a lesion or an organ) in 3D medical images. Through this process, 3D target information is obtained; hence, this technology is an important auxiliary tool for medical diagnosis. Although some methods have proved to be successful for two-dimensional (2D) image segmentation, their direct use in the 3D case has been unsatisfactory. To obtain more precise tumor segmentation results from 3D MR images, in this paper, we propose a method known as the 3D shape-weighted level set method (3D-SLSM). The proposed method first converts the LSM, which is superior with respect to 2D image segmentation, into a 3D algorithm that is suitable for overall calculations in 3D image models, and which improves the efficiency and accuracy of calculations. A 3D shape-weighted value is then added for each 3D-SLSM iterative process according to the changes in volume. Besides increasing the convergence rate and eliminating background noise, this shape-weighted value also brings the segmented contour closer to the actual tumor margins. To perform a quantitative analysis of 3D-SLSM and to examine its feasibility in clinical applications, we have divided our experiments into computer-simulated sequence images and actual breast MRI cases. Subsequently, we simultaneously compared various existing 3D segmentation methods. The experimental results demonstrated that 3D-SLSM exhibited precise segmentation results for both types of experimental images. In addition, 3D-SLSM showed better results for quantitative data compared with existing 3D segmentation methods.
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Meiburger KM, Acharya UR, Molinari F. Automated localization and segmentation techniques for B-mode ultrasound images: A review. Comput Biol Med 2017; 92:210-235. [PMID: 29247890 DOI: 10.1016/j.compbiomed.2017.11.018] [Citation(s) in RCA: 57] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2017] [Revised: 11/30/2017] [Accepted: 11/30/2017] [Indexed: 12/14/2022]
Abstract
B-mode ultrasound imaging is used extensively in medicine. Hence, there is a need to have efficient segmentation tools to aid in computer-aided diagnosis, image-guided interventions, and therapy. This paper presents a comprehensive review on automated localization and segmentation techniques for B-mode ultrasound images. The paper first describes the general characteristics of B-mode ultrasound images. Then insight on the localization and segmentation of tissues is provided, both in the case in which the organ/tissue localization provides the final segmentation and in the case in which a two-step segmentation process is needed, due to the desired boundaries being too fine to locate from within the entire ultrasound frame. Subsequenly, examples of some main techniques found in literature are shown, including but not limited to shape priors, superpixel and classification, local pixel statistics, active contours, edge-tracking, dynamic programming, and data mining. Ten selected applications (abdomen/kidney, breast, cardiology, thyroid, liver, vascular, musculoskeletal, obstetrics, gynecology, prostate) are then investigated in depth, and the performances of a few specific applications are compared. In conclusion, future perspectives for B-mode based segmentation, such as the integration of RF information, the employment of higher frequency probes when possible, the focus on completely automatic algorithms, and the increase in available data are discussed.
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Affiliation(s)
- Kristen M Meiburger
- Biolab, Department of Electronics and Telecommunications, Politecnico di Torino, Torino, Italy
| | - U Rajendra Acharya
- Department of Electronic & Computer Engineering, Ngee Ann Polytechnic, Singapore; Department of Biomedical Engineering, School of Science and Technology, SUSS University, Singapore; Department of Biomedical Imaging, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - Filippo Molinari
- Biolab, Department of Electronics and Telecommunications, Politecnico di Torino, Torino, Italy.
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Gui L, Yang X. Automatic renal lesion segmentation in ultrasound images based on saliency features, improved LBP, and an edge indicator under level set framework. Med Phys 2017; 45:223-235. [PMID: 29131363 DOI: 10.1002/mp.12661] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2017] [Revised: 10/09/2017] [Accepted: 10/11/2017] [Indexed: 12/11/2022] Open
Abstract
PURPOSE Segmentation of lesions in ultrasound images is widely used for preliminary diagnosis. In this paper, we develop an automatic segmentation algorithm for multiple types of lesions in ultrasound images. The proposed method is able to detect and segment lesions automatically as well as generate accurate segmentation results for lesion regions. METHODS In the detection step, two saliency detection frameworks which adopt global image information are designed to capture the differences between normal and abnormal organs as well as these between lesions and the normal tissues around them. In the segmentation step, three types of local information, i.e., image intensity, improved local binary patterns (LBP) features, and an edge indicator, are embedded into a modified level set framework to carry out the segmentation task. RESULTS The cyst and carcinoma regions in the ultrasound images of the human kidneys can be automatically detected and segmented by using the proposed method. The efficiency and accuracy of the method are validated by quantitative evaluations and comparative measurements with three well-recognized segmentation methods. Specifically, the average precision and dice coefficient of the proposed method in segmenting renal cysts are 95.33% and 90.16%, respectively, while those in segmenting renal carcinomas are 94.22% and 91.13%, respectively. The average precision and dice coefficient of the proposed method are higher than those of three compared segmentation methods. CONCLUSIONS The proposed method can efficiently detect and segment the renal lesions in ultrasound images. In addition, since the proposed method utilizes the differences between normal and abnormal organs as well as these between lesions and the normal tissues around them, it can be possibly extended to deal with lesions in other organs of ultrasound images as well as lesions in medical images of other modalities.
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Affiliation(s)
- Luying Gui
- Nanjing University of Science and Technology, Nanjing, Jiangsu, 210094, China
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