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Li X, Fan W, Shao X, Fang W, Zhang DH, Zhou M, Francisco JS, Zeng X. Photochemistry of Microsolvated Nitrous Acid: Observation of the Water-Separated Complex of Nitric Oxide and Hydroxyl Radical. J Phys Chem Lett 2025; 16:1320-1326. [PMID: 39873450 DOI: 10.1021/acs.jpclett.4c03483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2025]
Abstract
The photochemistry of nitrous acid (HONO) plays a crucial role in atmospheric chemistry as it serves as a key source of hydroxyl radicals (OH) in the atmosphere; however, our comprehension of the underlying mechanism for the photochemistry of HONO especially in the presence of water is far from being complete as the transient intermediates in the photoreactions have not been observed. Herein, we report the photochemistry of microsolvated HONO by water in a cryogenic N2 matrix. Specifically, the 1:1 hydrogen-bonded water complex of HONO was facially prepared in the matrix through stepwise photolytic O2 oxidation of the water complex of imidogen (NH-H2O) via the intermediacy of the elusive water complex of peroxyl isomer HNOO. Upon photolysis at 193 nm, the matrix-isolated HONO-H2O complex decomposes by yielding the ternary water complex of OH and NO due to the matrix cage effect. The identification of this rare water-separated radical pair (OH-H2O-NO) with matrix-isolation infrared and ultraviolet-visible spectroscopy is aided by D, 15N, and 18O isotope labeling and quantum chemical calculations at the (U)CCSD/AVTZ level of theory, and its most stable structure exhibits separate hydrogen bonding interactions of the OH and NO radicals with H2O via OH···OH2 and ON···HOH contacts, respectively. This ternary complex is extremely unstable, as it undergoes spontaneous radical recombination to reform the HONO-H2O complex in the temperature range of 4-12 K through quantum-mechanical tunneling with 16/18O, H/D, 14/15N kinetic isotopic effects of 1.43, 2.33, and 0.91, respectively. At increased temperatures from 15 to 21 K, the recombination proceeds predominantly by overcoming the activation barrier with an estimated height of 0.12(1) kcal/mol.
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Affiliation(s)
- Xiaolong Li
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Wenbin Fan
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Xin Shao
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Wei Fang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Dong H Zhang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Mingfei Zhou
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Joseph S Francisco
- Department of Earth and Environmental Science, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6243, United States
| | - Xiaoqing Zeng
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
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Li X, Fan W, Wang L, Jiang J, Du Y, Fang W, Trabelsi T, Francisco JS, Yang J, Li J, Zhou M, Zeng X. Direct Observation of HOON Intermediate in the Photochemistry of HONO. J Am Chem Soc 2024; 146:20494-20499. [PMID: 39001838 DOI: 10.1021/jacs.4c06851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/15/2024]
Abstract
The photochemistry of nitrous acid (HONO), encompassing dissociation into OH and NO as well as the reverse association reaction, plays a pivotal role in atmospheric chemistry. Here, we report the direct observation of nitrosyl-O-hydroxide (HOON) in the photochemistry of HONO, employing matrix-isolation IR and UV-vis spectroscopy. Despite a barrier of approximately 30 kJ/mol, HOON undergoes spontaneous rearrangement to the more stable HONO isomer through quantum mechanical tunneling, with a half-life of 28 min at 4 K. Kinetic isotope effects and instanton theory calculations reveal that the tunneling process involves the concerted motion of the NO moiety (65.2%) and the hydrogen atom (32.3%). Our findings underscore the significance of HOON as a key intermediate in the photolytic dissociation-association cycle of HONO at low temperatures.
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Affiliation(s)
- Xiaolong Li
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Wenbin Fan
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Lina Wang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Junjie Jiang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Yanqi Du
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Wei Fang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Tarek Trabelsi
- Department of Earth and Environment Science, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6243, United States
| | - Joseph S Francisco
- Department of Earth and Environment Science, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6243, United States
| | - Jiawei Yang
- School of Chemistry and Chemical Engineering and Chongqing Key Laboratory of Theoretical and Computational Chemistry, Chongqing University, Chongqing 401331, China
| | - Jun Li
- School of Chemistry and Chemical Engineering and Chongqing Key Laboratory of Theoretical and Computational Chemistry, Chongqing University, Chongqing 401331, China
| | - Mingfei Zhou
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
| | - Xiaoqing Zeng
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
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3
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Miller SA. The location of the chemical bond. Application of long covalent bond theory to the structure of silica. Front Chem 2023; 11:1123322. [PMID: 36874065 PMCID: PMC9978528 DOI: 10.3389/fchem.2023.1123322] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Accepted: 01/17/2023] [Indexed: 02/18/2023] Open
Abstract
Oxygen is the most abundant terrestrial element and is found in a variety of materials, but still wanting is a universal theory for the stability and structural organization it confers. Herein, a computational molecular orbital analysis elucidates the structure, stability, and cooperative bonding of α-quartz silica (SiO2). Despite geminal oxygen-oxygen distances of 2.61-2.64 Å, silica model complexes exhibit anomalously large O-O bond orders (Mulliken, Wiberg, Mayer) that increase with increasing cluster size-as the silicon-oxygen bond orders decrease. The average O-O bond order in bulk silica computes to 0.47 while that for Si-O computes to 0.64. Thereby, for each silicate tetrahedron, the six O-O bonds employ 52% (5.61 electrons) of the valence electrons, while the four Si-O bonds employ 48% (5.12 electrons), rendering the O-O bond the most abundant bond in the Earth's crust. The isodesmic deconstruction of silica clusters reveals cooperative O-O bonding with an O-O bond dissociation energy of 4.4 kcal/mol. These unorthodox, long covalent bonds are rationalized by an excess of O 2p-O 2p bonding versus anti-bonding interactions within the valence molecular orbitals of the SiO4 unit (48 vs. 24) and the Si6O6 ring (90 vs. 18). Within quartz silica, oxygen 2p orbitals contort and organize to avoid molecular orbital nodes, inducing the chirality of silica and resulting in Möbius aromatic Si6O6 rings, the most prevalent form of aromaticity on Earth. This long covalent bond theory (LCBT) relocates one-third of Earth's valence electrons and indicates that non-canonical O-O bonds play a subtle, but crucial role in the structure and stability of Earth's most abundant material.
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Affiliation(s)
- Stephen A Miller
- The George and Josephine Butler Laboratory for Polymer Research, Department of Chemistry, University of Florida, Gainesville, FL, United States
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4
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Khursan SL, Ovchinnikov MY, Yarullin AR, Teregulova AN, Safiullin RL. Global Kinetics and Spectral Modeling of p-Methoxyphenyl Azide Photooxidation. J Phys Chem A 2022; 126:8188-8195. [DOI: 10.1021/acs.jpca.2c05711] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Sergey L. Khursan
- Ufa Institute of Chemistry, Ufa Federal Research Center of the Russian Academy of Sciences, 71 pr. Oktyabrya, Ufa450054, Russian Federation
| | - Mikhail Yu. Ovchinnikov
- Ufa Institute of Chemistry, Ufa Federal Research Center of the Russian Academy of Sciences, 71 pr. Oktyabrya, Ufa450054, Russian Federation
| | - Aidar R. Yarullin
- Ufa Institute of Chemistry, Ufa Federal Research Center of the Russian Academy of Sciences, 71 pr. Oktyabrya, Ufa450054, Russian Federation
| | - Aigul N. Teregulova
- Ufa Institute of Chemistry, Ufa Federal Research Center of the Russian Academy of Sciences, 71 pr. Oktyabrya, Ufa450054, Russian Federation
| | - Rustam L. Safiullin
- Ufa Institute of Chemistry, Ufa Federal Research Center of the Russian Academy of Sciences, 71 pr. Oktyabrya, Ufa450054, Russian Federation
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5
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Senanayake PS, Syrlybaeva RR, Talipov MR. Unusual In-plane Aromaticity Facilitates Intramolecular Hydrogen Transfer in Long-Bonded cis-Isonitrosyl Methoxide. J Phys Chem A 2022; 126:6826-6833. [PMID: 36049165 DOI: 10.1021/acs.jpca.2c03315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The hydrogen-atom transfer from methoxy radical to nitric oxide, leading to the formation of formaldehyde and nitroxyl, represents a secondary reaction of photodissociation of methyl nitrite, which is used as rocket fuel. In this study, we explored the potential energy profile of the hydrogen-atom transfer using the electronic structure calculations at the DLPNO-CCSD(T)/aug-cc-pVTZ level of theory for two isomeric forms (cis and trans) of the pre-reaction complex. The cis-oriented pre-reaction complex has a weak elongated O─O bond, which gets further elongated in the hydrogen transfer transition state. This O─O bond stabilizes the pre-reaction complex by 32.9 kJ/mol. The O─O-induced stabilization is even greater for the transition state (48.2 kJ/mol), which was unexpected because of the larger O─O distance in the transition state structure. To address this paradox, we performed the electronic structure analysis of the reaction participants using the valence bond (VB) theory, natural resonance theory, topological analysis of the electron density and its derivatives, and analysis of the electron localization function distribution. This combined analysis led to the conclusion that the cis-transition state for hydrogen transfer, instead of being directly stabilized by the O─O interaction, gained substantial stabilization from the in-plane five-center six-electron aromaticity.
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Affiliation(s)
- Punhasa S Senanayake
- Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, United States
| | - Raulia R Syrlybaeva
- Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, United States
| | - Marat R Talipov
- Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, United States
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6
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Delgado AAA, Humason A, Kalescky R, Freindorf M, Kraka E. Exceptionally Long Covalent CC Bonds-A Local Vibrational Mode Study. Molecules 2021; 26:molecules26040950. [PMID: 33670107 PMCID: PMC7916873 DOI: 10.3390/molecules26040950] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2021] [Revised: 02/04/2021] [Accepted: 02/07/2021] [Indexed: 01/29/2023] Open
Abstract
For decades one has strived to synthesize a compound with the longest covalent C−C bond applying predominantly steric hindrance and/or strain to achieve this goal. On the other hand electronic effects have been added to the repertoire, such as realized in the electron deficient ethane radical cation in its D3d form. Recently, negative hyperconjugation effects occurring in diamino-o-carborane analogs such as di-N,N-dimethylamino-o-carborane have been held responsible for their long C−C bonds. In this work we systematically analyzed CC bonding in a diverse set of 53 molecules including clamped bonds, highly sterically strained complexes such as diamondoid dimers, electron deficient species, and di-N,N-dimethylamino-o-carborane to cover the whole spectrum of possibilities for elongating a covalent C−C bond to the limit. As a quantitative intrinsic bond strength measure, we utilized local vibrational CC stretching force constants ka(CC) and related bond strength orders BSO n(CC), computed at the ωB97X-D/aug-cc-pVTZ level of theory. Our systematic study quantifies for the first time that whereas steric hindrance and/or strain definitely elongate a C−C bond, electronic effects can lead to even longer and weaker C−C bonds. Within our set of molecules the electron deficient ethane radical cation, in D3d symmetry, acquires the longest C−C bond with a length of 1.935 Å followed by di-N,N-dimethylamino-o-carborane with a bond length of 1.930 Å. However, the C−C bond in di-N,N-dimethylamino-o-carborane is the weakest with a BSO n value of 0.209 compared to 0.286 for the ethane radical cation; another example that the longer bond is not always the weaker bond. Based on our findings we provide new guidelines for the general characterization of CC bonds based on local vibrational CC stretching force constants and for future design of compounds with long C−C bonds.
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7
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Chu X, Qian W, Lu B, Wang L, Qin J, Li J, Rauhut G, Trabelsi T, Francisco JS, Zeng X. The Triplet Hydroxyl Radical Complex of Phosphorus Monoxide. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202011512] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Xianxu Chu
- College of Chemistry Chemical Engineering and Materials Science Soochow University Suzhou 215123 China
| | - Weiyu Qian
- College of Chemistry Chemical Engineering and Materials Science Soochow University Suzhou 215123 China
| | - Bo Lu
- College of Chemistry Chemical Engineering and Materials Science Soochow University Suzhou 215123 China
| | - Lina Wang
- Department of Chemistry Fudan University Shanghai 200433 China
| | - Jie Qin
- School of Chemistry and Chemical Engineering and Chongqing Key Laboratory of Theoretical and Computational Chemistry Chongqing University Chongqing 401331 China
| | - Jun Li
- School of Chemistry and Chemical Engineering and Chongqing Key Laboratory of Theoretical and Computational Chemistry Chongqing University Chongqing 401331 China
| | - Guntram Rauhut
- Institute for Theoretical Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Tarek Trabelsi
- Department of Earth and Environment Science and Department of Chemistry University of Pennsylvania Philadelphia Pennsylvania 19104-6243 USA
| | - Joseph S. Francisco
- Department of Earth and Environment Science and Department of Chemistry University of Pennsylvania Philadelphia Pennsylvania 19104-6243 USA
| | - Xiaoqing Zeng
- College of Chemistry Chemical Engineering and Materials Science Soochow University Suzhou 215123 China
- Department of Chemistry Fudan University Shanghai 200433 China
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8
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Chu X, Qian W, Lu B, Wang L, Qin J, Li J, Rauhut G, Trabelsi T, Francisco JS, Zeng X. The Triplet Hydroxyl Radical Complex of Phosphorus Monoxide. Angew Chem Int Ed Engl 2020; 59:21949-21953. [PMID: 33073924 DOI: 10.1002/anie.202011512] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2020] [Indexed: 01/07/2023]
Abstract
Phosphorus monoxide (. PO) is a key intermediate in phosphorus chemistry, and its association with the hydroxyl radical (. OH) to yield metaphosphorous acid (cis-HOPO) contributes to the chemiluminescence in the combustion of phosphines. When photolyzing cis-HOPO in an Ar-matrix at 2.8 K, the simplest dioxophosphorane HPO2 and an elusive hydroxyl radical complex (HRC) of . PO form. This prototypical radical-radical complex reforms into cis-HOPO at above 12.0 K by overcoming a barrier of 0.28±0.02 kcal mol-1 . The vibrational spectra of this HRC and its D- and 18 O-isotopologues suggest a structure of . OH⋅⋅⋅OP. , for which a triplet spin multiplicity with a binding energy of -3.20 kcal mol-1 has been computed at the UCCSD(T)-F12a/aug-cc-pVTZ level.
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Affiliation(s)
- Xianxu Chu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
| | - Weiyu Qian
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
| | - Bo Lu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
| | - Lina Wang
- Department of Chemistry, Fudan University, Shanghai, 200433, China
| | - Jie Qin
- School of Chemistry and Chemical Engineering and Chongqing Key Laboratory of Theoretical and Computational Chemistry, Chongqing University, Chongqing, 401331, China
| | - Jun Li
- School of Chemistry and Chemical Engineering and Chongqing Key Laboratory of Theoretical and Computational Chemistry, Chongqing University, Chongqing, 401331, China
| | - Guntram Rauhut
- Institute for Theoretical Chemistry, University of Stuttgart, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Tarek Trabelsi
- Department of Earth and Environment Science and Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania, 19104-6243, USA
| | - Joseph S Francisco
- Department of Earth and Environment Science and Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania, 19104-6243, USA
| | - Xiaoqing Zeng
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
- Department of Chemistry, Fudan University, Shanghai, 200433, China
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9
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Qian W, Chu X, Song C, Wu Z, Jiao M, Liu H, Zou B, Rauhut G, Tew DP, Wang L, Zeng X. Hydrogen-Atom Tunneling in Metaphosphorous Acid. Chemistry 2020; 26:8205-8209. [PMID: 32302021 DOI: 10.1002/chem.202000844] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Indexed: 11/08/2022]
Abstract
Metaphosphorous acid (HOPO), a key intermediate in phosphorus chemistry, has been generated in syn- and anti-conformations in the gas phase by high-vacuum flash pyrolysis (HVFP) of a molecular precursor ethoxyphosphinidene oxide (EtOPO→C2 H4 +HOPO) at ca. 1000 K and subsequently trapped in an N2 -matrix at 2.8 K. Unlike the two conformers of the nitrogen analogue HONO, the anti-conformer of HOPO undergoes spontaneous rotamerization at 2.8 K via hydrogen-atom tunneling (HAT) with noticeable kinetic isotope effects for H/D (>104 for DOPO) and 16 O/18 O (1.19 for H18 OPO and 1.06 for HOP18 O) in N2 -matrices.
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Affiliation(s)
- Weiyu Qian
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China
| | - Xianxu Chu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China
| | - Chao Song
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China
| | - Zhuang Wu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China
| | - Mengqi Jiao
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China
| | - Hanwen Liu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China
| | - Bin Zou
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China
| | - Guntram Rauhut
- Institute for Theoretical Chemistry, University of Stuttgart, Pfaffenwaldring 55, Stuttgart, 70569, Germany
| | - David P Tew
- Max-Planck Institute for Solid State Research, Heisenbergstraße 1, Stuttgart, 70569, Germany
| | - Lina Wang
- Department of Chemistry, Fudan University, Shanghai, 200433, China
| | - Xiaoqing Zeng
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123, Suzhou, China.,Department of Chemistry, Fudan University, Shanghai, 200433, China
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10
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Paradigms and paradoxes: revisiting the relation of oxidation state and acidity of polyhydride cations. Struct Chem 2019. [DOI: 10.1007/s11224-019-01402-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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11
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Wu Z, Chen C, Liu J, Lu Y, Xu J, Liu X, Cui G, Trabelsi T, Francisco JS, Mardyukov A, Eckhardt AK, Schreiner PR, Zeng X. Caged Nitric Oxide-Thiyl Radical Pairs. J Am Chem Soc 2019; 141:3361-3365. [PMID: 30758958 DOI: 10.1021/jacs.8b12746] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
S-Nitrosothiols (RSNO) are exogenous and endogenous sources of nitric oxide in biological systems due to facile homolytic cleavage of the S-N bonds. By following the photolytic decomposition of prototypical RSNO (R = Me and Et) in Ne, Ar, and N2 matrixes (<10 K), elusive caged radical pairs consisting of nitric oxide (NO•) and thiyl radicals (RS•), bridged by O···S and H···N connections, were identified with IR and UV/vis spectroscopy. Upon red-light irradiation, both caged radical pairs (RS•···•ON) vanish and reform RSNO. According to the calculation at the CASPT2(10,8)/cc-pVDZ level (298.15 K), the dissociation energy of MeS•···•ON amounts to 4.7 kcal mol-1.
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Affiliation(s)
- Zhuang Wu
- College of Chemistry, Chemical Engineering and Materials Science , Soochow University , Suzhou 215123 , China
| | - Changyun Chen
- College of Chemistry, Chemical Engineering and Materials Science , Soochow University , Suzhou 215123 , China
| | - Jie Liu
- College of Chemistry, Chemical Engineering and Materials Science , Soochow University , Suzhou 215123 , China
| | - Yan Lu
- College of Chemistry, Chemical Engineering and Materials Science , Soochow University , Suzhou 215123 , China
| | - Jian Xu
- College of Chemistry, Chemical Engineering and Materials Science , Soochow University , Suzhou 215123 , China
| | - Xiangyang Liu
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry , Beijing Normal University , Beijing 100875 , China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry , Beijing Normal University , Beijing 100875 , China
| | - Tarek Trabelsi
- Department of Earth and Environmental Science and Department of Chemistry , University of Pennsylvania , Philadelphia , Pennsylvania 19104 , United States
| | - Joseph S Francisco
- Department of Earth and Environmental Science and Department of Chemistry , University of Pennsylvania , Philadelphia , Pennsylvania 19104 , United States
| | - Artur Mardyukov
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - André K Eckhardt
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - Peter R Schreiner
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - Xiaoqing Zeng
- College of Chemistry, Chemical Engineering and Materials Science , Soochow University , Suzhou 215123 , China
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12
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Syrlybaeva RR, Talipov MR. Ab Initio Study Predicts That Enigmatic Isonitrosyl Fluoride Should Be Stable at Low Temperatures yet Unnoticeable Due to Its Photoreactivity. J Phys Chem A 2018; 122:1027-1033. [DOI: 10.1021/acs.jpca.7b12130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Raulia R. Syrlybaeva
- Department of Chemistry and
Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, United States
| | - Marat R. Talipov
- Department of Chemistry and
Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, United States
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13
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Baraban JH, Martin‐Drumel M, Changala PB, Eibenberger S, Nava M, Patterson D, Stanton JF, Ellison GB, McCarthy MC. The Molecular Structure of
gauche
‐1,3‐Butadiene: Experimental Establishment of Non‐planarity. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201709966] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Joshua H. Baraban
- Department of Chemistry and Biochemistry University of Colorado Boulder CO 80309 USA
- Current address: Dept. of Chemistry Ben-Gurion University of the Negev Beer-Sheva 84105 Israel
| | - Marie‐Aline Martin‐Drumel
- Harvard-Smithsonian Center for Astrophysics and School of Engineering & Applied Sciences Harvard University Cambridge Massachusetts 02138 USA
- Current address: Institut des Sciences Moléculaires d'Orsay, CNRS Univ. Paris-Sud, Université Paris-Saclay Orsay France
| | - P. Bryan Changala
- JILA, National Institute of Standards and Technology and Department of Physics University of Colorado Boulder CO 80309 USA
| | | | - Matthew Nava
- Department of Chemistry Massachusetts Institute of Technology Cambridge Massachusetts 02139 USA
- Current address: Department of Chemistry Harvard University Cambridge MA 02138 USA
| | - David Patterson
- Department of Physics Harvard University Cambridge MA 02138 USA
- Current address: Department of Physics University of California Santa Barbara CA 93106 USA
| | - John F. Stanton
- Quantum Theory Project Depts. of Chemistry and Physics Univ. of Florida Gainesville FL 32611 USA
| | - G. Barney Ellison
- Department of Chemistry and Biochemistry University of Colorado Boulder CO 80309 USA
| | - Michael C. McCarthy
- Harvard-Smithsonian Center for Astrophysics and School of Engineering & Applied Sciences Harvard University Cambridge Massachusetts 02138 USA
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14
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Baraban JH, Martin‐Drumel M, Changala PB, Eibenberger S, Nava M, Patterson D, Stanton JF, Ellison GB, McCarthy MC. The Molecular Structure of
gauche
‐1,3‐Butadiene: Experimental Establishment of Non‐planarity. Angew Chem Int Ed Engl 2018; 57:1821-1825. [DOI: 10.1002/anie.201709966] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2017] [Indexed: 11/10/2022]
Affiliation(s)
- Joshua H. Baraban
- Department of Chemistry and Biochemistry University of Colorado Boulder CO 80309 USA
- Current address: Dept. of Chemistry Ben-Gurion University of the Negev Beer-Sheva 84105 Israel
| | - Marie‐Aline Martin‐Drumel
- Harvard-Smithsonian Center for Astrophysics and School of Engineering & Applied Sciences Harvard University Cambridge Massachusetts 02138 USA
- Current address: Institut des Sciences Moléculaires d'Orsay, CNRS Univ. Paris-Sud, Université Paris-Saclay Orsay France
| | - P. Bryan Changala
- JILA, National Institute of Standards and Technology and Department of Physics University of Colorado Boulder CO 80309 USA
| | | | - Matthew Nava
- Department of Chemistry Massachusetts Institute of Technology Cambridge Massachusetts 02139 USA
- Current address: Department of Chemistry Harvard University Cambridge MA 02138 USA
| | - David Patterson
- Department of Physics Harvard University Cambridge MA 02138 USA
- Current address: Department of Physics University of California Santa Barbara CA 93106 USA
| | - John F. Stanton
- Quantum Theory Project Depts. of Chemistry and Physics Univ. of Florida Gainesville FL 32611 USA
| | - G. Barney Ellison
- Department of Chemistry and Biochemistry University of Colorado Boulder CO 80309 USA
| | - Michael C. McCarthy
- Harvard-Smithsonian Center for Astrophysics and School of Engineering & Applied Sciences Harvard University Cambridge Massachusetts 02138 USA
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Laws BA, Cavanagh SJ, Lewis BR, Gibson ST. NOO Peroxy Isomer Exposed with Velocity-Map Imaging. J Phys Chem Lett 2017; 8:4397-4401. [PMID: 28854335 DOI: 10.1021/acs.jpclett.7b02183] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The chemistry of NO2, a key atmospheric trace gas, has historically been interpreted in terms of the C2v isomer ONO, with the peroxy isomer NOO only postulated to be stable. In this work, a velocity-map-imaged photoelectron spectrum of the nitrite anion, NO2-, reveals energetic-electron structure that may only occur by photodetachment from the NOO-(X̃1A') isomer. This measurement defines NOO(X̃2A') bond frequencies and an electron affinity of only 335(30) cm-1, which, supported by ab initio calculations, confirm the first observation of this important reactive species.
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Affiliation(s)
- B A Laws
- Research School of Physics and Engineering, The Australian National University , Canberra ACT 2601, Australia
| | - S J Cavanagh
- Research School of Physics and Engineering, The Australian National University , Canberra ACT 2601, Australia
| | - B R Lewis
- Research School of Physics and Engineering, The Australian National University , Canberra ACT 2601, Australia
| | - S T Gibson
- Research School of Physics and Engineering, The Australian National University , Canberra ACT 2601, Australia
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16
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Nava M, Martin-Drumel MA, Lopez CA, Crabtree KN, Womack CC, Nguyen TL, Thorwirth S, Cummins CC, Stanton JF, McCarthy MC. Spontaneous and Selective Formation of HSNO, a Crucial Intermediate Linking H2S and Nitroso Chemistries. J Am Chem Soc 2016; 138:11441-4. [DOI: 10.1021/jacs.6b05886] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Matthew Nava
- Department
of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Marie-Aline Martin-Drumel
- Harvard-Smithsonian
Center for Astrophysics and School of Engineering
and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Christopher A. Lopez
- Institute
for Theoretical Chemistry, Department of Chemistry, University of Texas, Austin, Texas 78712, United States
| | - Kyle N. Crabtree
- Harvard-Smithsonian
Center for Astrophysics and School of Engineering
and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Caroline C. Womack
- Department
of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Thanh L. Nguyen
- Institute
for Theoretical Chemistry, Department of Chemistry, University of Texas, Austin, Texas 78712, United States
| | - Sven Thorwirth
- I. Physikalisches
Institut, Universität zu Köln, 50937 Köln, Germany
| | - Christopher C. Cummins
- Department
of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - John F. Stanton
- Institute
for Theoretical Chemistry, Department of Chemistry, University of Texas, Austin, Texas 78712, United States
| | - Michael C. McCarthy
- Harvard-Smithsonian
Center for Astrophysics and School of Engineering
and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138, United States
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17
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Crabtree KN, Martin-Drumel MA, Brown GG, Gaster SA, Hall TM, McCarthy MC. Microwave spectral taxonomy: A semi-automated combination of chirped-pulse and cavity Fourier-transform microwave spectroscopy. J Chem Phys 2016; 144:124201. [PMID: 27036440 DOI: 10.1063/1.4944072] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Because of its structural specificity, rotational spectroscopy has great potential as an analytical tool for characterizing the chemical composition of complex gas mixtures. However, disentangling the individual molecular constituents of a rotational spectrum, especially if many of the lines are entirely new or unknown, remains challenging. In this paper, we describe an empirical approach that combines the complementary strengths of two techniques, broadband chirped-pulse Fourier transform microwave spectroscopy and narrowband cavity Fourier transform microwave spectroscopy, to characterize and assign lines. This procedure, called microwave spectral taxonomy, involves acquiring a broadband rotational spectrum of a rich mixture, categorizing individual lines based on their relative intensities under series of assays, and finally, linking rotational transitions of individual chemical compounds within each category using double resonance techniques. The power of this procedure is demonstrated for two test cases: a stable molecule with a rich spectrum, 3,4-difluorobenzaldehyde, and products formed in an electrical discharge through a dilute mixture of C2H2 and CS2, in which spectral taxonomy has enabled the identification of propynethial, HC(S)CCH.
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Affiliation(s)
- Kyle N Crabtree
- Department of Chemistry, University of California, Davis, Davis, California 95616, USA
| | - Marie-Aline Martin-Drumel
- Harvard-Smithsonian Center for Astrophysics, Cambridge, Massachusetts 02138, USA and School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138, USA
| | | | | | - Taylor M Hall
- Coker College, Hartsville, South Carolina 29550, USA
| | - Michael C McCarthy
- Harvard-Smithsonian Center for Astrophysics, Cambridge, Massachusetts 02138, USA and School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138, USA
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18
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Takeshita TY, Dunning TH. Generalized Valence Bond Description of Chalcogen-Nitrogen Compounds. III. Why the NO-OH and NS-OH Bonds Are So Different. J Phys Chem A 2016; 120:6846-50. [PMID: 27501366 DOI: 10.1021/acs.jpca.6b06283] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Crabtree et al. recently reported the microwave spectrum of nitrosyl-O-hydroxide (trans-NOOH), an isomer of nitrous acid, and found that this molecule has the longest O-O bond ever observed: 1.9149 Å ± 0.0005 Å. This is in marked contrast to the structure of the valence isoelectronic trans-NSOH molecule, which has a normal NS-OH bond length and strength. Generalized valence bond calculations show that the long bond in trans-NOOH is the result of a weak through-pair interaction that singlet couples the spins of the electrons in singly occupied orbitals on the hydroxyl radical and nitrogen atom, an interaction that is enhanced by the intervening lone pair of the oxygen atom in NO. The NS-OH bond is the result of the formation of a stable recoupled pair bond dyad, which accounts for both its length and strength.
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Affiliation(s)
- Tyler Y Takeshita
- Department of Chemistry, University of Illinois at Urbana-Champaign , 600 South Mathews Avenue, Urbana, Illinois 61801, United States
| | - Thom H Dunning
- Department of Chemistry, University of Illinois at Urbana-Champaign , 600 South Mathews Avenue, Urbana, Illinois 61801, United States
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19
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Bhasi P, Nhlabatsi ZP, Sitha S. Expanding the applicability of electrostatic potentials to the realm of transition states. Phys Chem Chem Phys 2016; 18:13002-9. [PMID: 27108668 DOI: 10.1039/c6cp01506a] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Central to any reaction mechanism study, and sometimes a challenging job, is tracing a transition state in a reaction path. For the first time, electrostatic potentials (ESP) of the reactants were used as guiding tactics to predict whether there is a possibility of any transition state in a reaction surface. The main motive behind this strategy is to see whether the directionality nature of the transition state has something to do with the anisotropic natures of the ESP with their embedded directionalities. Strategically, some atmospherically important, but simple, reactions have been chosen for this study, which heretofore were believed to be barrierless. By carefully analysing the ESP maps of the reactants, regions of possible interactions were located. Using the bilinear interpolation of the 2D grids of the ESP surfaces, search co-ordinates were fine-tuned for a local gradient based approach for the search of a transition state. Out of the three reactions studied in this work, we were able to successfully locate transition states, for the first time, in two cases and the third one still proved to be barrierless. This gives a clear indication that though ESP maps can qualitatively predict the possibility of a transition state; it is not always true that there should definitely be a transition state, as some of the reaction surfaces may genuinely be barrierless. But, nevertheless this strategy definitely has credential to be tested for many more reactions, either new or already established, and may be applied to create the initial search co-ordinates for any well-established transition state search method. Moreover, we have observed that the analysis of the ESP maps of the reactants were very much useful in explaining the nature of interactions existing in those observed transition states and we hope the same can also be extended to any transition state in an electrostatically driven reaction potential energy surface.
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Affiliation(s)
- Priya Bhasi
- Department of Chemistry, University of Johannesburg, PO Box 524, Auckland Park, Johannesburg, 2006, South Africa.
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Simmie JM. A Database of Formation Enthalpies of Nitrogen Species by Compound Methods (CBS-QB3, CBS-APNO, G3, G4). J Phys Chem A 2015; 119:10511-26. [PMID: 26421747 DOI: 10.1021/acs.jpca.5b06054] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Accurate thermochemical data for compounds containing C/H/N/O are required to underpin kinetics simulation and modeling of the reactions of these species in different environments. There is a dearth of experimental data so computational quantum chemistry has stepped in to fill this breach and to verify whether particular experiments are in need of revision. A number of composite model chemistries (CBS-QB3, CBS-APNO, G3, and G4) are used to compute theoretical atomization energies and hence enthalpies of formation at 0 and 298.15 K, and these are benchmarked against the best available compendium of values, the Active Thermochemical Tables or ATcT. In general the agreement is very good for some 28 species with the only discrepancy being for hydrazine. It is shown that, although individually the methods do not perform that well, collectively the mean unsigned error is <1.7 kJ mol(-1); hence, this approach provides a useful tool to screen published values and validate new experimental results. Using multiple model chemistries does have some drawbacks but can produce good results even for challenging molecules like HOON and CN2O2. The results for these smaller validated molecules are then used as anchors for determining the formation enthalpies of larger species such as methylated hydrazines and diazenes, five- and six-membered heterocyclics via carefully chosen isodesmic working reactions with the aim of resolving some discrepancies in the literature and establishing a properly validated database. This expanded database could be useful in testing the performance of computationally less-demanding density function methods with newer functionals that have the capacity to treat much larger systems than those tested here.
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Affiliation(s)
- John M Simmie
- Combustion Chemistry Centre & School of Chemistry, National University of Ireland , Galway H91 TK33, Ireland
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21
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Velasco V, Aguilà D, Barrios LA, Borilovic I, Roubeau O, Ribas-Ariño J, Fumanal M, Teat SJ, Aromí G. New coordination features; a bridging pyridine and the forced shortest non-covalent distance between two CO 32- species. Chem Sci 2015; 6:123-131. [PMID: 28616127 PMCID: PMC5461881 DOI: 10.1039/c4sc02491e] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2014] [Accepted: 09/28/2014] [Indexed: 12/27/2022] Open
Abstract
The aerobic reaction of the multidentate ligand 2,6-bis-(3-oxo-3-(2-hydroxyphenyl)-propionyl)-pyridine, H4L, with Co(ii) salts in strong basic conditions produces the clusters [Co4(L)2(OH)(py)7]NO3 (1) and [Co8Na4(L)4(OH)2(CO3)2(py)10](BF4)2 (2). Analysis of their structure unveils unusual coordination features including a very rare bridging pyridine ligand or two trapped carbonate anions within one coordination cage, forced to stay at an extremely close distance (dO···O = 1.946 Å). This unprecedented non-bonding proximity represents a meeting point between long covalent interactions and "intermolecular" contacts. These original motifs have been analysed here through DFT calculations, which have yielded interaction energies and the reduced repulsion energy experimented by both CO32- anions when located in close proximity inside the coordination cage.
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Affiliation(s)
- V Velasco
- Departament de Química Inorgànica , Universitat de Barcelona , Diagonal 645 , 08028 Barcelona , Spain . ; Tel: +34 934039760
| | - D Aguilà
- Departament de Química Inorgànica , Universitat de Barcelona , Diagonal 645 , 08028 Barcelona , Spain . ; Tel: +34 934039760
| | - L A Barrios
- Departament de Química Inorgànica , Universitat de Barcelona , Diagonal 645 , 08028 Barcelona , Spain . ; Tel: +34 934039760
| | - I Borilovic
- Departament de Química Inorgànica , Universitat de Barcelona , Diagonal 645 , 08028 Barcelona , Spain . ; Tel: +34 934039760
| | - O Roubeau
- Instituto de Ciencia de Materiales de Aragón (ICMA) , CSIC and Universidad de Zaragoza , Plaza San Francisco s/n , 50009 , Zaragoza , Spain
| | - J Ribas-Ariño
- Departament de Química Física and IQTCUB , Universitat de Barcelona , Diagonal 645 , 08028 Barcelona , Spain
| | - M Fumanal
- Departament de Química Física and IQTCUB , Universitat de Barcelona , Diagonal 645 , 08028 Barcelona , Spain
| | - S J Teat
- Advanced Light Source , Berkeley Laboratory , 1 Cyclotron Road , Berkeley , California 94720 , USA
| | - G Aromí
- Departament de Química Inorgànica , Universitat de Barcelona , Diagonal 645 , 08028 Barcelona , Spain . ; Tel: +34 934039760
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Denis PA, Huelmo CP. New trends along hydrogen polyoxides: unusually long oxygen–oxygen bonds in H2O6and H2O7. Mol Phys 2014. [DOI: 10.1080/00268976.2014.928385] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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