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For: Jost JL, Drake JF, Fredrickson AG, Tsuchiya HM. Interactions of Tetrahymena pyriformis, Escherichia coli, Azotobacter vinelandii, and glucose in a minimal medium. J Bacteriol 1973;113:834-40. [PMID: 4632323 PMCID: PMC285298 DOI: 10.1128/jb.113.2.834-840.1973] [Citation(s) in RCA: 115] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]  Open
Number Cited by Other Article(s)
1
Summers JK, Kreft JU. The role of mathematical modelling in understanding prokaryotic predation. Front Microbiol 2022;13:1037407. [PMID: 36643414 PMCID: PMC9835096 DOI: 10.3389/fmicb.2022.1037407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Accepted: 11/23/2022] [Indexed: 12/30/2022]  Open
2
Plunder S, Burkard M, Lauer UM, Venturelli S, Marongiu L. Determination of phage load and administration time in simulated occurrences of antibacterial treatments. Front Med (Lausanne) 2022;9:1040457. [PMID: 36388928 PMCID: PMC9650209 DOI: 10.3389/fmed.2022.1040457] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 10/13/2022] [Indexed: 03/19/2024]  Open
3
Koshy-Chenthittayil S, Dimitrova E, Jenkins E, Dean B. A computational framework for finding parameter sets associated with chaotic dynamics. In Silico Biol 2021;14:41-51. [PMID: 33896838 PMCID: PMC8203228 DOI: 10.3233/isb-200476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
4
Higher-Order Interaction between Species Inhibits Bacterial Invasion of a Phototroph-Predator Microbial Community. Cell Syst 2019;9:521-533.e10. [PMID: 31838145 DOI: 10.1016/j.cels.2019.11.004] [Citation(s) in RCA: 60] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2019] [Revised: 07/26/2019] [Accepted: 11/07/2019] [Indexed: 12/15/2022]
5
Dolinšek J, Goldschmidt F, Johnson DR. Synthetic microbial ecology and the dynamic interplay between microbial genotypes. FEMS Microbiol Rev 2018;40:961-979. [PMID: 28201744 DOI: 10.1093/femsre/fuw024] [Citation(s) in RCA: 58] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Revised: 01/27/2016] [Accepted: 07/04/2016] [Indexed: 01/27/2023]  Open
6
Chaotic attractor in two-prey one-predator system originates from interplay of limit cycles. THEOR ECOL-NETH 2016. [DOI: 10.1007/s12080-016-0317-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
7
Kengwoung-Keumo JJ. Competition between a nonallelopathic phytoplankton and an allelopathic phytoplankton species under predation. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2016;13:787-812. [PMID: 27775385 DOI: 10.3934/mbe.2016018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
8
Bairagi N, Adak D. Complex dynamics of a predator–prey–parasite system: An interplay among infection rate, predator's reproductive gain and preference. ECOLOGICAL COMPLEXITY 2015. [DOI: 10.1016/j.ecocom.2015.01.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
9
Kengwoung-Keumo JJ. Dynamics of two phytoplankton populations under predation. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2014;11:1319-1336. [PMID: 25365603 DOI: 10.3934/mbe.2014.11.1319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
10
Jaberi-Douraki M, Schnell S, Pietropaolo M, Khadra A. Unraveling the contribution of pancreatic beta-cell suicide in autoimmune type 1 diabetes. J Theor Biol 2014;375:77-87. [PMID: 24831415 DOI: 10.1016/j.jtbi.2014.05.003] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2014] [Accepted: 05/01/2014] [Indexed: 12/26/2022]
11
Hiltunen T, Hairston NG, Hooker G, Jones LE, Ellner SP. A newly discovered role of evolution in previously published consumer-resource dynamics. Ecol Lett 2014;17:915-23. [DOI: 10.1111/ele.12291] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2013] [Revised: 01/20/2014] [Accepted: 04/08/2014] [Indexed: 11/28/2022]
12
Ali E, Asif M, Ajbar A. Study of chaotic behavior in predator–prey interactions in a chemostat. Ecol Modell 2013. [DOI: 10.1016/j.ecolmodel.2013.02.029] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
13
Identification of nested biological kinetic models using likelihood ratio tests. Chem Eng Sci 2012. [DOI: 10.1016/j.ces.2012.08.033] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
14
Reiss J, Forster J, Cássio F, Pascoal C, Stewart R, Hirst AG. When Microscopic Organisms Inform General Ecological Theory. ADV ECOL RES 2010. [DOI: 10.1016/b978-0-12-385005-8.00002-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
15
Shiga toxin as a bacterial defense against a eukaryotic predator, Tetrahymena thermophila. J Bacteriol 2009;191:5116-22. [PMID: 19502393 DOI: 10.1128/jb.00508-09] [Citation(s) in RCA: 92] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
16
Vasiliadou I, Pavlou S, Vayenas D. Dynamics of a chemostat with three competitive hydrogen oxidizing denitrifying microbial populations and their efficiency for denitrification. Ecol Modell 2009. [DOI: 10.1016/j.ecolmodel.2009.02.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
17
Gaki A, Theodorou A, Vayenas DV, Pavlou S. Complex dynamics of microbial competition in the gradostat. J Biotechnol 2008;139:38-46. [PMID: 18809443 DOI: 10.1016/j.jbiotec.2008.08.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2008] [Accepted: 08/21/2008] [Indexed: 10/21/2022]
18
FRY JC, HUMPHREY NCB, ILES TC. A Review Time-series Analysis for Identifying Cyclic Components in Microbiological Data. ACTA ACUST UNITED AC 2008. [DOI: 10.1111/j.1365-2672.1981.tb00884.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
19
Yoon H, Blanch HW. Competition for double growth-limiting nutrients in continuous culture. ACTA ACUST UNITED AC 2007. [DOI: 10.1002/jctb.5020270139] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
20
Wilson JB, Spijkerman E, Huisman J. Is there really insufficient support for Tilman's R* concept? A comment on Miller et al. Am Nat 2007;169:700-6. [PMID: 17427140 DOI: 10.1086/513113] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2006] [Accepted: 09/22/2006] [Indexed: 11/03/2022]
21
Mankin R, Laas T, Sauga A, Ainsaar A, Reiter E. Colored-noise-induced Hopf bifurcations in predator-prey communities. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2006;74:021101. [PMID: 17025387 DOI: 10.1103/physreve.74.021101] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2006] [Indexed: 05/12/2023]
22
Becks L, Hilker FM, Malchow H, Jürgens K, Arndt H. Experimental demonstration of chaos in a microbial food web. Nature 2005;435:1226-9. [PMID: 15988524 DOI: 10.1038/nature03627] [Citation(s) in RCA: 129] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2005] [Accepted: 04/12/2005] [Indexed: 11/09/2022]
23
Alhumazi K, Ajbar A. Dynamics of Predator-Prey Interactions in Continuous Cultures. Eng Life Sci 2005. [DOI: 10.1002/elsc.200420062] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]  Open
24
Ecological and Evolutionary Dynamics of Experimental Plankton Communities. ADV ECOL RES 2005. [DOI: 10.1016/s0065-2504(04)37007-8] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
25
Competition of three aggregated microbial species for four substrates in the rumen. Ecol Modell 2003. [DOI: 10.1016/s0304-3800(02)00383-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
26
Competition in Well-Mixed Habitats: From Competitive Exclusion to Competitive Chaos. COMPETITION AND COEXISTENCE 2002. [DOI: 10.1007/978-3-642-56166-5_2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
27
Vayenas DV, Pavlou S. Chaotic dynamics of a microbial system of coupled food chains. Ecol Modell 2001. [DOI: 10.1016/s0304-3800(00)00437-3] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
28
Fussmann GF, Ellner SP, Shertzer KW, Hairston NG. Crossing the hopf bifurcation in a live predator-prey system. Science 2000;290:1358-60. [PMID: 11082063 DOI: 10.1126/science.290.5495.1358] [Citation(s) in RCA: 307] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
29
Jang SR, Baglama J. Qualitative behavior of a variable-yield simple food chain with an inhibiting nutrient. Math Biosci 2000;164:65-80. [PMID: 10704638 DOI: 10.1016/s0025-5564(99)00064-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
30
Vayenas DV, Pavlou S. Chaotic dynamics of a food web in a chemostat. Math Biosci 1999;162:69-84. [PMID: 10616281 DOI: 10.1016/s0025-5564(99)00044-9] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
31
Vayenas DV, Pavlou S. Coexistence of three microbial populations competing for three complementary nutrients in a chemostat. Math Biosci 1999;161:1-13. [PMID: 10546438 DOI: 10.1016/s0025-5564(99)00040-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
32
Pavlou S. Computing operating diagrams of bioreactors. J Biotechnol 1999;71:7-16. [PMID: 10483097 DOI: 10.1016/s0168-1656(99)00011-5] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
33
Thomopoulos NA, Vayenas DV, Pavlou S. On the coexistence of three microbial populations competing for two complementary substrates in configurations of interconnected chemostats. Math Biosci 1998;154:87-102. [PMID: 9949649 DOI: 10.1016/s0025-5564(98)10047-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
34
Lenas P, Thomopoulos NA, Vayenas DV, Pavlou S. Oscillations of two competing microbial populations in configurations of two interconnected chemostats. Math Biosci 1998;148:43-63. [PMID: 9597824 DOI: 10.1016/s0025-5564(97)10002-5] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
35
Jaworska JS, Hallam TG, Schultz TW. A community model of ciliate Tetrahymena and bacteria E coli: Part II. interactions in a batch system. Bull Math Biol 1996;58:265-83. [PMID: 8713660 DOI: 10.1007/bf02458309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
36
Lenas P, Pavlou S. Coexistence of three competing microbial populations in a chemostat with periodically varying dilution rate. Math Biosci 1995;129:111-42. [PMID: 7549217 DOI: 10.1016/0025-5564(94)00056-6] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
37
Dykhuizen DE, Dean AM. Predicted fitness changes along an environmental gradient. Evol Ecol 1994. [DOI: 10.1007/bf01238256] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
38
Hsu SB, Waltman P, Wolkowicz GSK. Global analysis of a model of plasmid-bearing, plasmid-free competition in a chemostat. J Math Biol 1994. [DOI: 10.1007/bf00163024] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
39
Taylor MA, Pavlou S, Kevrekidis IG. Microbial predation in coupled chemostats: a global study of two coupled nonlinear oscillators. Math Biosci 1994;122:25-66. [PMID: 8081048 DOI: 10.1016/0025-5564(94)90081-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
40
Lenas P, Pavlou S. Periodic, quasi-periodic, and chaotic coexistence of two competing microbial populations in a periodically operated chemostat. Math Biosci 1994;121:61-110. [PMID: 8204991 DOI: 10.1016/0025-5564(94)90032-9] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
41
Hatzis C, Srienc F, Fredrickson AG. Feeding heterogeneity in ciliate populations: Effects of culture age and nutritional state. Biotechnol Bioeng 1994;43:371-80. [DOI: 10.1002/bit.260430505] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
42
Hatzis C, Sweeney PJ, Srienc F, Fredrickson AG. Determination of cellular rate distributions in microbial cell populations: Feeding rates of ciliated protozoa. Biotechnol Bioeng 1993;42:284-94. [DOI: 10.1002/bit.260420304] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
43
Implications of Resource-Ratio Theory for Microbial Ecology. ACTA ACUST UNITED AC 1993. [DOI: 10.1007/978-1-4615-2858-6_1] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/11/2023]
44
Complex dynamics in a model microbial system. Bull Math Biol 1992. [DOI: 10.1007/bf02459637] [Citation(s) in RCA: 50] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
45
Schmidt SK, Smith R, Sheker D, Hess TF, Silverstein J, Radehaus PM. Interactions of bacteria and microflagellates in sequencing batch reactors exhibiting enhanced mineralization of toxic organic chemicals. MICROBIAL ECOLOGY 1992;23:127-142. [PMID: 24192859 DOI: 10.1007/bf00172635] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/1991] [Revised: 11/22/1991] [Indexed: 06/02/2023]
46
Pavlou S, Kevrekidis IG. Microbial predation in a periodically operated chemostat: a global study of the interaction between natural and externally imposed frequencies. Math Biosci 1992;108:1-55. [PMID: 1550993 DOI: 10.1016/0025-5564(92)90002-e] [Citation(s) in RCA: 47] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
47
Chaotic Response of a Periodically Forced System of Two Competing Microbial Species. ACTA ACUST UNITED AC 1992. [DOI: 10.1007/978-1-4615-3464-8_26] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
48
Fredrickson AG. Segregated, structured, distributed models and their role in microbial ecology: A case study based on work done on the filter-feeding ciliateTetrahymena pyriformis. MICROBIAL ECOLOGY 1991;22:139-159. [PMID: 24194333 DOI: 10.1007/bf02540220] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/1990] [Revised: 02/12/1991] [Indexed: 06/02/2023]
49
Tsangaropoulou E, Pavlou S. Effects of spatial heterogeneity on the dynamics of a microbial feeding interaction. Biotechnol Bioeng 1990;35:1024-33. [PMID: 18588248 DOI: 10.1002/bit.260351010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
50
Pavlou S, Kevrekidis IG, Lyberatos G. On the coexistence of competing microbial species in a chemostat under cycling. Biotechnol Bioeng 1990;35:224-32. [DOI: 10.1002/bit.260350303] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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