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Turina P. Modulation of the H+/ATP coupling ratio by ADP and ATP as a possible regulatory feature in the F-type ATP synthases. Front Mol Biosci 2022; 9:1023031. [PMID: 36275634 PMCID: PMC9583940 DOI: 10.3389/fmolb.2022.1023031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2022] [Accepted: 09/12/2022] [Indexed: 11/13/2022] Open
Abstract
F-type ATP synthases are transmembrane enzymes, which play a central role in the metabolism of all aerobic and photosynthetic cells and organisms, being the major source of their ATP synthesis. Catalysis occurs via a rotary mechanism, in which the free energy of a transmembrane electrochemical ion gradient is converted into the free energy of ATP phosphorylation from ADP and Pi, and vice versa. An ADP, tightly bound to one of the three catalytic sites on the stator head, is associated with catalysis inhibition, which is relieved by the transmembrane proton gradient and by ATP. By preventing wasteful ATP hydrolysis in times of low osmotic energy and low ATP/ADP ratio, such inhibition constitutes a classical regulatory feedback effect, likely to be an integral component of in vivo regulation. The present miniview focuses on an additional putative regulatory phenomenon, which has drawn so far little attention, consisting in a substrate-induced tuning of the H+/ATP coupling ratio during catalysis, which might represent an additional key to energy homeostasis in the cell. Experimental pieces of evidence in support of such a phenomenon are reviewed.
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Gober JW, Kashket ER. K regulates bacteroid-associated functions of Bradyrhizobium. Proc Natl Acad Sci U S A 2010; 84:4650-4. [PMID: 16593858 PMCID: PMC305148 DOI: 10.1073/pnas.84.13.4650] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Cowpea Bradyrhizobium 32H1 cells, when grown under 0.2% O(2), synthesize nitrogenase, as well as a methylammonium (ammonium) transport system and an electrogenic K(+)/H(+) antiporter. This effect was seen in growth medium containing 8-12 mM K(+) but not with 50 muM K(+). Addition of K(+) to cells growing under low O(2) tensions in low-K(+) medium led to various phenotypic properties associated with bacteroids, including the ability to reduce acetylene, induction of an ammonium transport carrier and the K(+)/H(+) antiporter, and increased synthesis of two heme-biosynthetic enzymes, delta-aminolevulinate synthase and delta-aminolevulinate dehydratase. K(+) addition caused the repression of glutamine synthetase and of capsular polysaccharide synthesis, functions related to the free-living state. A similar pattern of regulation was observed in Bradyrhizobium japonicum. In addition, K(+)-mediated depression in Bradyrhizobium 32H1 was inhibited by exudate of Vigna unguiculata, its host plant. We conclude that K(+) ions, in addition to low O(2) tension, are needed for the expression of several bacteroid-related functions in bradyrhizobia and thus are a major controlling influence in bacteroid development.
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Affiliation(s)
- J W Gober
- Department of Microbiology, Boston University School of Medicine, 80 East Concord Street, Boston, MA 02118
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Gober JW, Kashket ER. Role of DNA Superhelicity in Regulation of Bacteroid-Associated Functions of Bradyrhizobium sp. Strain 32H1. Appl Environ Microbiol 2010; 55:1420-5. [PMID: 16347935 PMCID: PMC202881 DOI: 10.1128/aem.55.6.1420-1425.1989] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Bradyrhizobium sp. strain 32H1 cells express a number of bacteroid-associated functions and repress some functions related to the free-living state when grown ex planta under conditions of low (0.2%) oxygen tension and relatively high levels (>8 mM) of medium K. Expression of the bacteroid-associated phenotype was blocked by the DNA gyrase inhibitor novobiocin. Because the degree of negative supercoiling of DNA is the result of the activities of both DNA gyrase and topoisomerase I, we measured these enzymes in cells grown under nitrogen-fixing (low O(2), high K) and non-nitrogen-fixing conditions (low O(2), low [50 muM] K or high O(2), high K). Lower topoisomerase I activities were seen in extracts from nitrogen-fixing cells than in those from non-nitrogen-fixing cells. In contrast, DNA gyrase levels were lower in high-O(2)-grown cells than under the other conditions tested. These differences are consistent with an increase in DNA superhelicity associated with growth under low-O(2), high-K conditions. A spontaneous mutant resistant to the DNA gyrase inhibitor ciprofloxacin was found to be constitutive with respect to the K requirement, because it expressed the bacteroid-associated phenotype when grown under low-O(2), low-K conditions. The mutant cells gave rise to effective nodules on Macroptilium atropurpureum and possessed the low topoisomerase I activities and high DNA gyrase levels of low-O(2)-, high-K-grown wild-type cells. Our data suggest that changes in DNA supercoiling resulting from low O(2) tension and a high K concentration exert a major influence on the expression of the bacteroid-associated phenotype.
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Affiliation(s)
- J W Gober
- Department of Microbiology, Boston University School of Medicine, 80 E. Concord St., Boston, Massachusetts 02118-2394
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Botero LM, Al-Niemi TS, McDermott TR. Characterization of two inducible phosphate transport systems in Rhizobium tropici. Appl Environ Microbiol 2000; 66:15-22. [PMID: 10618197 PMCID: PMC91779 DOI: 10.1128/aem.66.1.15-22.2000] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Rhizobium tropici forms nitrogen-fixing nodules on the roots of the common bean (Phaseolus vulgaris). Like other legume-Rhizobium symbioses, the bean-R. tropici association is sensitive to the availability of phosphate (P(i)). To better understand phosphorus movement between the bacteroid and the host plant, P(i) transport was characterized in R. tropici. We observed two P(i) transport systems, a high-affinity system and a low-affinity system. To facilitate the study of these transport systems, a Tn5B22 transposon mutant lacking expression of the high-affinity transport system was isolated and used to characterize the low-affinity transport system in the absence of the high-affinity system. The K(m) and V(max) values for the low-affinity system were estimated to be 34 +/- 3 microM P(i) and 118 +/- 8 nmol of P(i) x min(-1) x mg (dry weight) of cells(-1), respectively, and the K(m) and V(max) values for the high-affinity system were 0.45 +/- 0.01 microM P(i) and 86 +/- 5 nmol of P(i) x min(-1) x mg (dry weight) of cells(-1), respectively. Both systems were inducible by P(i) starvation and were also shock sensitive, which indicated that there was a periplasmic binding-protein component. Neither transport system appeared to be sensitive to the proton motive force dissipator carbonyl cyanide m-chlorophenylhydrazone, but P(i) transport through both systems was eliminated by the ATPase inhibitor N,N'-dicyclohexylcarbodiimide; the P(i) transport rate was correlated with the intracellular ATP concentration. Also, P(i) movement through both systems appeared to be unidirectional, as no efflux or exchange was observed with either the wild-type strain or the mutant. These properties suggest that both P(i) transport systems are ABC type systems. Analysis of the transposon insertion site revealed that the interrupted gene exhibited a high level of homology with kdpE, which in several bacteria encodes a cytoplasmic response regulator that governs responses to low potassium contents and/or changes in medium osmolarity.
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Affiliation(s)
- L M Botero
- Department of Land Resources and Environmental Sciences, Montana State University, Bozeman, Montana 59717, USA
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A new model for the rapid effects of non-invasive treatments on nitrogenase and respiratory activity in legume nodules. J Theor Biol 1995. [DOI: 10.1006/jtbi.1995.0110] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Bulthuis BA, Koningstein GM, Stouthamer AH, van Verseveld HW. The relation of proton motive force, adenylate energy charge and phosphorylation potential to the specific growth rate and efficiency of energy transduction in Bacillus licheniformis under aerobic growth conditions. Antonie Van Leeuwenhoek 1993; 63:1-16. [PMID: 8386914 DOI: 10.1007/bf00871725] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
The magnitude of the proton motive force (delta p) and its constituents, the electrical (delta psi) and chemical potential (-Z delta pH), were established for chemostat cultures of a protease-producing, relaxed (rel-) variant and a not protease-producing, stringent (rel+) variant of an industrial strain of Bacillus licheniformis (respectively referred to as the A- and the B-type). For both types, an inverse relation of delta p with the specific growth rate mu was found. The calculated intracellular pH (pHin) was not constant but inversely related to mu. This change in pHin might be related to regulatory functions of metabolism but a regulatory role for pHin itself could not be envisaged. Measurement of the adenylate energy charge (EC) showed a direct relation with mu for glucose-limited chemostat cultures; in nitrogen-limited chemostat cultures, the EC showed an approximately constant value at low mu and an increased value at higher mu. For both limitations, the ATP/ADP ratio was directly related to mu. The phosphorylation potential (delta G'p) was invariant with mu. From the values for delta G'p and delta p, a variable -->H+/ATP-stoichiometry was inferred: -->H+/ATP = 1.83 +/- 0.52 mu, so that at a given -->H+/O-ratio of four (4), the apparent P/O-ratio (inferred from regression analysis) showed a decline of 2.16 to 1.87 for mu = 0 to mu max (we discuss how more than half of this decline will be independent of any change in internal cell-volume). We propose that the constancy of delta G'p and the decrease in the efficiency of energy-conservation (P/O-value) with increasing mu are a way in which the cells try to cope with an apparent less than perfect coordination between anabolism and catabolism to keep up the highest possible mu with a minimum loss of growth-efficiency. Protease production in nitrogen-limited cultures as compared to glucose-limited cultures, and the difference between the A- and B-type, could not be explained by a different energy-status of the cells.
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Affiliation(s)
- B A Bulthuis
- Department of Microbiology, Vrije Universiteit, Amsterdam, The Netherlands
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Kannenberg EL, Brewin NJ. Expression of a cell surface antigen from Rhizobium leguminosarum 3841 is regulated by oxygen and pH. J Bacteriol 1989; 171:4543-8. [PMID: 2768181 PMCID: PMC210248 DOI: 10.1128/jb.171.9.4543-4548.1989] [Citation(s) in RCA: 66] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
Rhizobium leguminosarum bv. viciae 3841 was grown in liquid suspension culture to investigate how culture conditions could affect the expression of a developmentally regulated cell surface antigen associated with lipopolysaccharide. The antigen, which is recognized by monoclonal antibody AFRC MAC 203, was expressed when cultures were grown at neutral pH under low-oxygen conditions (less than 7.5% [vol/vol] O2 in the gas phase). Antigen was also expressed in aerobically grown cultures at pH values below 5.3. The nature of the nitrogen and the carbon sources had no effect on antigen expression except by indirect changes on the pH of the culture medium; similarly, growth in 0.3 M NaCl did not result in antigen expression. The induction of MAC 203 antigen by low-oxygen or low-pH culture conditions is discussed in the context of tissue-specific expression within the legume root nodule.
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O'hara GW, Goss TJ, Dilworth MJ, Glenn AR. Maintenance of Intracellular pH and Acid Tolerance in
Rhizobium meliloti. Appl Environ Microbiol 1989; 55:1870-1876. [PMID: 16347984 PMCID: PMC202972 DOI: 10.1128/aem.55.8.1870-1876.1989] [Citation(s) in RCA: 106] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
The development and function of the
Rhizobium meliloti-Medicago
sp. symbiosis are sensitive to soil acidity. Physiological criteria that can be measured in culture which serve to predict acid tolerance in soil would be valuable. The intracellular pH of
R. meliloti
was measured using either radioactively labeled weak acids (5,5-dimethyloxazolidine-2,4-dione and butyric acid) or pH-sensitive fluorescent compounds; both methods gave similar values. Six acid-tolerant strains (WSM419, WSM533, WSM539, WSM540, WSM852, and WSM870) maintained an alkaline intracellular pH when the external pH was between 5.6 and 7.2. In contrast, two Australian commercial inoculant strains (CC169 and U45) and four acid-sensitive strains from alkaline soils in Iraq (WSM244, WSM301, WSM365, and WSM367) maintained an alkaline intracellular pH when the external pH was ≥6.5, but had intracellular pH values of ≤6.8 when the external pH was ≤6.0. Four transposon Tn
5
-induced mutants of acid-tolerant strain WSM419, impaired in their ability to grow at pH 5.6, showed limited control over the intracellular pH. The ability to generate a large pH gradient under acid conditions may be a better indicator of acid tolerance in
R. meliloti
under field conditions than is growth on acidic agar plates.
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Affiliation(s)
- Graham W O'hara
- Nitrogen Fixation Research Group, School of Biological and Environmental Sciences, Murdoch University, Murdoch 6150, Western Australia, Australia
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O'Brian MR, Maier RJ. Molecular aspects of the energetics of nitrogen fixation in Rhizobium-legume symbioses. BIOCHIMICA ET BIOPHYSICA ACTA 1989; 974:229-46. [PMID: 2659085 DOI: 10.1016/s0005-2728(89)80239-7] [Citation(s) in RCA: 57] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- M R O'Brian
- Department of Biology, Johns Hopkins University, Baltimore, MD 21218
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Abstract
The energetics of motility in Synechococcus strain WH8113 were studied to understand the unique nonflagellar swimming of this cyanobacterium. There was a specific sodium requirement for motility such that cells were immotile below 10 mM external sodium and cell speed increased with increasing sodium levels above 10 mM to a maximum of about 15 microns/s at 150 to 250 mM sodium. The sodium motive force increased similarly with increasing external sodium from -120 to -165 mV, but other energetic parameters including proton motive force, electrical potential, the proton diffusion gradient, and the sodium diffusion gradient did not show such a correlation. Over a range of external sodium concentrations, cell speed was greater in alkaline environments than in neutral or acidic environments. Monensin and carbonyl cyanide m-chlorophenylhydrazone inhibited motility and affected components of sodium motive force but did not affect ATP levels. Cells were motile when incubated with 3-(3,4-dichlorophenyl)-1,1-dimethylurea and arsenate, which decreased cellular ATP to about 2% of control values. The results of this investigation are consistent with the conclusion that the direct source of energy for Synechococcus motility is a sodium motive force and that below a threshold of about -100 mV, cells are immotile.
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Škrdleta V, Lisá L, Němcová M. Comparison of peas nodulated with a hydrogen-uptake positive or negative Strain ofRhizobium leguminosarum. Folia Microbiol (Praha) 1987. [DOI: 10.1007/bf02881105] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Stam H, Stouthamer AH, Verseveld HW. Hydrogen metabolism and energy costs of nitrogen fixation. FEMS Microbiol Lett 1987. [DOI: 10.1111/j.1574-6968.1987.tb02453.x] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Gober JW, Kashket ER. Effects of K+ on the proton motive force of Bradyrhizobium sp. strain 32H1. J Bacteriol 1986; 166:618-22. [PMID: 3009414 PMCID: PMC214649 DOI: 10.1128/jb.166.2.618-622.1986] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
In previous studies, respiring Bradyrhizobium sp. strain 32H1 cells grown under 0.2% O2, conditions that derepress N2 fixation, were found to have a low proton motive force of less than -121 mV, because of a low membrane potential (delta psi). In contrast, cells grown under 21% O2, which do not fix N2, had high proton motive force values of -175 mV or more, which are typical of respiring bacteria, because of high delta psi values. In the present study, we found that a delta psi of 0 mV in respiring cells requires growth in relatively high-[K+] media (8 mM), low O2 tension, and high internal [K+]. When low-[O2], high-[K+]-grown cells were partially depleted of K+, the delta psi was high. When cells were grown under 21% O2 or in media low in K+ (50 microM K+), the delta psi was again high. The transmembrane pH gradient was affected only slightly by varying the growth or assay conditions. In addition, low-[O2], high-[K+]-grown cells had a greater proton permeability than did high-[O2]-grown cells. To explain these findings, we postulate that cells grown under conditions that derepress N2 fixation contain an electrogenic K+/H+ antiporter that is responsible for the dissipation of the delta psi. The consequence of this alteration in K+ cycling is rerouting of proton circuits so that the putative antiporter becomes the major pathway for H+ influx, rather than the H+-ATP synthase.
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Bhandari B, Nicholas DJ. Proton motive force in washed cells of Rhizobium japonicum and bacteroids from Glycine max. J Bacteriol 1985; 164:1383-5. [PMID: 2999086 PMCID: PMC219346 DOI: 10.1128/jb.164.3.1383-1385.1985] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
The components of the proton motive force (delta p), namely the membrane potential and the transmembrane pH gradient, were measured in washed cells of Rhizobium japonicum CC705 grown in cultures (5% O2-95% N2) in the presence of 10 mM KNO3 and in bacteroids from Glycine max. The delta p and its components remained reasonably constant in cells as well as in bacteroids at various stages of growth. The effects of uncouplers and ATPase inhibitors on the delta p and its components were determined in both cultured cells and bacteroids. The data indicated that a respiration-driven H+ translocation is the source of the delta p in both cultured cells and bacteroids.
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Gober JW, Kashket ER. Measurement of the proton motive force in Rhizobium meliloti with the Escherichia coli lacY gene product. J Bacteriol 1985; 164:929-31. [PMID: 2997139 PMCID: PMC214343 DOI: 10.1128/jb.164.2.929-931.1985] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
An Escherichia coli lac operon constitutive for lacY was subcloned into the EcoRI site of a wide-host-range plasmid of the Q incompatibility group, and the resulting recombinant plasmid was introduced into Tn5-generated Lac- mutants of Rhizobium meliloti. The R. meliloti transconjugants accumulated lactose about 1,000-fold, equivalent to a proton motive force of -170 to -180 mV, not significantly different from the values calculated from the distributions of weak acids and lipophilic cations.
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Bergersen F, Turner G. Measurement of components of proton motive force and related parameters in steady, microaerobic conditions. J Microbiol Methods 1985. [DOI: 10.1016/0167-7012(85)90003-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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