Contrasting effects of local environment and grazing pressure on the genetic diversity and structure of Artemisia frigida

Drylands count among the most globally extensive biomes, and while many desert and dry rangeland ecosystems are under threat, genetic structures of dryland species are still rarely studied. Artemisia frigida is one of the most widely distributed plant species in the temperate rangelands of Eurasia and North America, and it also dominates in many habitats of Mongolia due to its tolerance to low temperatures, drought and disturbance. Local environmental conditions and grazing pressure can influence species performance and affect spatial patterns of genetic diversity in contrasting ways, and our study set out to evaluate such effects on the genetic diversity and structure of A. frigida. We first developed new species-specific Simple Sequence Repeats (SSRs) markers using whole genome sequencing. We then analysed 11 populations of A. frigida that had been sampled along a large climatic gradient in Mongolia, which were sub-structured according to three levels of grazing intensity. Estimates of genetic diversity at the population level were high (HO = 0.56, HE = 0.73) and tended to increase with higher precipitation and soil nutrient availability. Grazing had no effect on genetic diversity, however, a high number of grazing-specific indicator alleles was found at grazed sites. Genetic differentiation among populations was extremely low (global GST = 0.034). Analysis of Molecular Variance revealed 5% variance between populations along the climatic gradient, with 3% of the variance being partitioned among different grazing intensity levels. We found no relationship between geographic and genetic distances, and thus no isolation by distance in this widely distributed species. The relatively low genetic structuring suggests that considerable gene flow exists among A. frigida populations across the rangelands of Mongolia, in spite of the pervasive grazing in the region.

Plant traits and phenotypic variability effect on the phytomass production of Stipagrostis ciliata (Desf.) De Winter

A process of continuous degradation of plant communities, due mainly to long-term overgrazing has been revealed by most ecological studies in North African arid climate. Notably, this degradation appeared across the depletion of perennial grass species exhibiting low density in the majority of range ecosystems. This study aimed to examine the phenology and the aboveground phytomass production of Stipagrostis ciliata (Desf.) De Winter accessions, a perennial grass, growing under the same environment but coming from different climates of Tunisia. Additionally, the extent of genetic variation in phenological parameters, root and shoot phytomass productivity and the correlations among these parameters were also analyzed. Significant differences in all morphological parameters of S. ciliata accessions were revealed by ANOVA test and were corroborated with significant and positive correlation indicated by Pearson’s correlation analysis. Plant diameter, biovolume, root biomass with protective sleeve and spike number exhibited significant differences and high distinctiveness between S. ciliata accessions. Tukey’s HDS tests indicated the presence of three groups of accessions. Principal component analysis (PCA) applied on a table with eight observations and 13 variables, and dispersion of S. ciliata accessions on the first two axes of PCA confirmed the presence of three groups of accessions. Trait variability in the field for the five accessions is more likely to be the result of phenotypic plasticity rather than of genetic differentiation between accessions. Overall, the characterization of S. ciliata accessions exhibited significant differences in terms of morphological and biomass productivity.

Bioclimatic regions influence genetic structure of four Jordanian Stipa species

Strong environmental gradients can affect the genetic structure of plant populations, but little is known as to whether closely related species respond similarly or idiosyncratically to ecogeographic variation. We analysed the extent to which gradients in temperature and rainfall shape the genetic structure of four Stipa species in four bioclimatic regions in Jordan. Genetic diversity, differentiation and structure of Stipa species were investigated using amplified fragment length polymorphism (AFLP) molecular markers. For each of the four study species, we sampled 120 individuals from ten populations situated in distinct bioclimatic regions and assessed the degree of genetic diversity and genetic differentiation within and among populations. The widespread ruderals Stipa capensis and S. parviflora had higher genetic diversity than the geographically restricted semi-desert species S. arabica and S. lagascae. In three of the four species, genetic diversity strongly decreased with precipitation, while genetic diversity increased with temperature in S. capensis. Most genetic diversity resided among populations in the semi-desert species (Φ(ST) = 0.572/0.595 in S. arabica/lagascae) but within populations in the ruderal species (Φ(ST) = 0.355/0.387 S. capensis/parviflora). Principal coordinate analysis (PCoA) and STRUCTURE analysis showed that Stipa populations of all species clustered ecogeographically. A genome scan revealed that divergent selection at particular AFLP loci contributed to genetic differentiation. Irrespective of their different life histories, Stipa species responded similarly to the bioclimatic gradient in Jordan. We conclude that, in addition to predominant random processes, steep climatic gradients might shape the genetic structure of plant populations.