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Tsypurskaya EV, Nikolaeva TN, Lapshin PV, Nechaeva TL, Yuorieva NO, Baranova EN, Derevyagina MK, Nazarenko LV, Goldenkova-Pavlova IV, Zagoskina NV. Response of Transgenic Potato Plants Expressing Heterologous Genes of ∆9- or ∆12-Acyl-lipid Desaturases to Phytophthora infestans Infection. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11030288. [PMID: 35161270 PMCID: PMC8840463 DOI: 10.3390/plants11030288] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Revised: 01/13/2022] [Accepted: 01/18/2022] [Indexed: 05/29/2023]
Abstract
Late blight is one of the most economically important diseases affecting potato and causing a significant loss in yield. The development of transgenic potato plants with enhanced resistance to infection by Phytophthora infestans may represent a possible approach to solving this issue. A comparative study of the leaf response in control potato plants (S.tuberosum L. cultivar Skoroplodnyi), control transgenic plants expressing the reporter gene of thermostable lichenase (transgenic licBM3 line) and transgenic plants expressing cyanobacterial hybrid genes ∆9-acyl-lipid desaturase (transgenic desC lines) and ∆12-acyl-lipid desaturase (transgenic desA lines) to infection with P. infestans has been performed. The expression of desaturase genes in potato plants enhanced their tolerance to potato late blight agents as compared with the control. The lipid peroxidation level raised in the leaves of the control and transgenic desA plants on third day after inoculation with P. infestans zoospores and remained the same in the transgenic desC plants. The number of total phenolic compounds was increased as early as on the second day after infection in all studied variants and continued to remain the same, except for transgenic desC plants. Accumulation of flavonoids, the main components of the potato leaf phenolic complex, raised on the second day in all studied variants, remained unchanged on the third day in the control plants and decreased in most transgenic plants expressing desaturase genes. The results obtained in our study demonstrate that the expression of genes of Δ9- and Δ12-acyl-lipid desaturases in potato plants enhanced their resistance to P. infestans as compared with the control non-transgenic plants due to concomitant accumulation of phenolic compounds, including flavonoids, in the leaves. All these changes were more pronounced in transgenic desC plants, which indicates that the Δ9-acyllipid desaturase gene appears to be a potential inducer of the production of biological antioxidants in plant cells.
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Affiliation(s)
- Elena V. Tsypurskaya
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia; (T.N.N.); (P.V.L.); (T.L.N.); (N.O.Y.); (I.V.G.-P.)
| | - Tatiana N. Nikolaeva
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia; (T.N.N.); (P.V.L.); (T.L.N.); (N.O.Y.); (I.V.G.-P.)
| | - Petr V. Lapshin
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia; (T.N.N.); (P.V.L.); (T.L.N.); (N.O.Y.); (I.V.G.-P.)
| | - Tatiana L. Nechaeva
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia; (T.N.N.); (P.V.L.); (T.L.N.); (N.O.Y.); (I.V.G.-P.)
| | - Natalya O. Yuorieva
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia; (T.N.N.); (P.V.L.); (T.L.N.); (N.O.Y.); (I.V.G.-P.)
| | - Ekaterina N. Baranova
- N.V. Tsitsin Main Botanical Garden of Russian Academy of Sciences, Botanicheskaya 4, 127276 Moscow, Russia
- All Russia Research Institute of Agricultural Biotechnology, Russian Academy of Agricultural Sciences, 127550 Moscow, Russia
| | | | - Lyudmila V. Nazarenko
- Department of Biology and Human Physiology, Institute of Natural Sciences and Sports Technologies, Moscow City Teachers’ Training University, 129226 Moscow, Russia;
| | - Irina V. Goldenkova-Pavlova
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia; (T.N.N.); (P.V.L.); (T.L.N.); (N.O.Y.); (I.V.G.-P.)
| | - Natalia V. Zagoskina
- K.A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia; (T.N.N.); (P.V.L.); (T.L.N.); (N.O.Y.); (I.V.G.-P.)
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Yaroshko OM. TRANSIENT EXPRESSION OF REPORTER GENES IN CULTIVARS OF Amaranthus caudatus L. BIOTECHNOLOGIA ACTA 2021. [DOI: 10.15407/biotech14.04.053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Local cultivars of A. caudatus: Helios and Karmin were used as plant material. Amaranth is a new pseudocereal introduced in Ukraine. The plant biomass of amaranth is used in medicine, food industry and cosmetology industry. Aim. The purpose of the work was to identify the optimal conditions for the transient expression of reporter genes in Amaranthus caudatus cultivars. Methods. Biochemical and microscopy methods were used in the following work. Seedlings and adult plants of different age were infiltrated with agrobacterial suspensions separately (genetic vector pCBV19 with a uidA gene and genetic vector pNMD2501 with a gfp gene in Agrobacterium tumefaciens GV3101 strain). Results. Transient expression of the uidA and gfp genes was obtained in amaranth plants after conduction series of experiments. The most intensive transient expression of gfp and uidA genes was observed in seedlings infiltrated at the age of 1 day. The maximum fluorescence of the GFP protein was observed on 5th–6th days. Conclusions. It was shown that the cultivar Helios was more susceptible to agrobacterial infection than the cultivar Karmin. The effectiveness of Agrobacterium mediated transformation was from 16% to 95% for the Helios cultivar and from 12% to 93% for the Karmin cultivar. The obtained results indicate that the studied amaranth cultivars can potentially be used for obtaining transient expression of target genes and synthesizing target proteins in their tissues in the future.
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Tyurin AA, Suhorukova AV, Kabardaeva KV, Goldenkova-Pavlova IV. Transient Gene Expression is an Effective Experimental Tool for the Research into the Fine Mechanisms of Plant Gene Function: Advantages, Limitations, and Solutions. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1187. [PMID: 32933006 PMCID: PMC7569937 DOI: 10.3390/plants9091187] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 08/31/2020] [Accepted: 09/08/2020] [Indexed: 12/16/2022]
Abstract
A large data array on plant gene expression accumulated thanks to comparative omic studies directs the efforts of researchers to the specific or fine effects of the target gene functions and, as a consequence, elaboration of relatively simple and concurrently effective approaches allowing for the insight into the physiological role of gene products. Numerous studies have convincingly demonstrated the efficacy of transient expression strategy for characterization of the plant gene functions. The review goals are (i) to consider the advantages and limitations of different plant systems and methods of transient expression used to find out the role of gene products; (ii) to summarize the current data on the use of the transient expression approaches for the insight into fine mechanisms underlying the gene function; and (iii) to outline the accomplishments in efficient transient expression of plant genes. In general, the review discusses the main and critical steps in each of the methods of transient gene expression in plants; areas of their application; main results obtained using plant objects; their contribution to our knowledge about the fine mechanisms of the plant gene functions underlying plant growth and development; and clarification of the mechanisms regulating complex metabolic pathways.
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Affiliation(s)
| | | | | | - Irina V. Goldenkova-Pavlova
- Timiryazev Institute of Plant Physiology, Russian Academy of Sciences (IPP RAS), Moscow 127276, Russia; (A.A.T.); (A.V.S.); (K.V.K.)
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Miguel S, Nisse E, Biteau F, Rottloff S, Mignard B, Gontier E, Hehn A, Bourgaud F. Assessing Carnivorous Plants for the Production of Recombinant Proteins. FRONTIERS IN PLANT SCIENCE 2019; 10:793. [PMID: 31275341 PMCID: PMC6593082 DOI: 10.3389/fpls.2019.00793] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2018] [Accepted: 05/31/2019] [Indexed: 05/16/2023]
Abstract
The recovery of recombinant proteins from plant tissues is an expensive and time-consuming process involving plant harvesting, tissue extraction, and subsequent protein purification. The downstream process costs can represent up to 80% of the total cost of production. Secretion-based systems of carnivorous plants might help circumvent this problem. Drosera and Nepenthes can produce and excrete out of their tissues a digestive fluid containing up to 200 mg. L-1 of natural proteins. Based on the properties of these natural bioreactors, we have evaluated the possibility to use carnivorous plants for the production of recombinant proteins. In this context, we have set up original protocols of stable and transient genetic transformation for both Drosera and Nepenthes sp. The two major drawbacks concerning the proteases naturally present in the secretions and a polysaccharidic network composing the Drosera glue were overcome by modulating the pH of the plant secretions. At alkaline pH, digestive enzymes are inactive and the interactions between the polysaccharidic network and proteins in the case of Drosera are subdued allowing the release of the recombinant proteins. For D. capensis, a concentration of 25 μg of GFP/ml of secretion (2% of the total soluble proteins from the glue) was obtained for stable transformants. For N. alata, a concentration of 0.5 ng of GFP/ml secretions (0.5% of total soluble proteins from secretions) was reached, corresponding to 12 ng in one pitcher after 14 days for transiently transformed plants. This plant-based expression system shows the potentiality of biomimetic approaches leading to an original production of recombinant proteins, although the yields obtained here were low and did not allow to qualify these plants for an industrial platform project.
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Affiliation(s)
- Sissi Miguel
- Plant Advanced Technologies SA, Vandoeuvre-lès-Nancy, France
| | - Estelle Nisse
- Plant Advanced Technologies SA, Vandoeuvre-lès-Nancy, France
| | - Flore Biteau
- Laboratoire Agronomie et Environnement, INRA, Université de Lorraine, Vandoeuvre-lès-Nancy, France
| | - Sandy Rottloff
- Laboratoire Agronomie et Environnement, INRA, Université de Lorraine, Vandoeuvre-lès-Nancy, France
| | - Benoit Mignard
- Plant Advanced Technologies SA, Vandoeuvre-lès-Nancy, France
| | - Eric Gontier
- Laboratoire Biopi, Université de Picardie Jules Verne, Amiens, France
| | - Alain Hehn
- Laboratoire Agronomie et Environnement, INRA, Université de Lorraine, Vandoeuvre-lès-Nancy, France
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Goldenkova-Pavlova IV, Pavlenko OS, Mustafaev ON, Deyneko IV, Kabardaeva KV, Tyurin AA. Computational and Experimental Tools to Monitor the Changes in Translation Efficiency of Plant mRNA on a Genome-Wide Scale: Advantages, Limitations, and Solutions. Int J Mol Sci 2018; 20:E33. [PMID: 30577638 PMCID: PMC6337405 DOI: 10.3390/ijms20010033] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2018] [Revised: 12/17/2018] [Accepted: 12/19/2018] [Indexed: 02/06/2023] Open
Abstract
The control of translation in the course of gene expression regulation plays a crucial role in plants' cellular events and, particularly, in responses to environmental factors. The paradox of the great variance between levels of mRNAs and their protein products in eukaryotic cells, including plants, requires thorough investigation of the regulatory mechanisms of translation. A wide and amazingly complex network of mechanisms decoding the plant genome into proteome challenges researchers to design new methods for genome-wide analysis of translational control, develop computational algorithms detecting regulatory mRNA contexts, and to establish rules underlying differential translation. The aims of this review are to (i) describe the experimental approaches for investigation of differential translation in plants on a genome-wide scale; (ii) summarize the current data on computational algorithms for detection of specific structure⁻function features and key determinants in plant mRNAs and their correlation with translation efficiency; (iii) highlight the methods for experimental verification of existed and theoretically predicted features within plant mRNAs important for their differential translation; and finally (iv) to discuss the perspectives of discovering the specific structural features of plant mRNA that mediate differential translation control by the combination of computational and experimental approaches.
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Affiliation(s)
- Irina V Goldenkova-Pavlova
- Group of Functional Genomics, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya str. 35, Moscow 127276, Russia.
| | - Olga S Pavlenko
- Group of Functional Genomics, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya str. 35, Moscow 127276, Russia.
| | - Orkhan N Mustafaev
- Department of Biophysics and Molecular Biology, Baku State University, Zahid Khalilov Str. 23, Baku AZ 1148, Azerbaijan.
| | - Igor V Deyneko
- Group of Functional Genomics, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya str. 35, Moscow 127276, Russia.
| | - Ksenya V Kabardaeva
- Group of Functional Genomics, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya str. 35, Moscow 127276, Russia.
| | - Alexander A Tyurin
- Group of Functional Genomics, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya str. 35, Moscow 127276, Russia.
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Zhang C, Wu X, Zhang B, Chen Q, Liu M, Xin D, Qi Z, Li S, Ma Y, Wang L, Jin Y, Li W, Wu X, Su AY. Functional analysis of the GmESR1 gene associated with soybean regeneration. PLoS One 2017; 12:e0175656. [PMID: 28403182 PMCID: PMC5389854 DOI: 10.1371/journal.pone.0175656] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2016] [Accepted: 03/29/2017] [Indexed: 11/19/2022] Open
Abstract
Plant regeneration can occur via in vitro tissue culture through somatic embryogenesis or de novo shoot organogenesis. Transformation of soybean (Glycine max) is difficult, hence optimization of the transformation system for soybean regeneration is required. This study investigated ENHANCER OF SHOOT REGENERATION 1 (GmESR1), a soybean transcription factor that targets regeneration-associated genes. Sequence analysis showed that GmESR1 contained a conserved 57 amino acid APETALA 2 (AP2)/ETHYLENE RESPONSE FACTOR (ERF) DNA-binding domain. The relative expression level of GmESR1 was highest in young embryos, flowers and stems in the soybean cultivar 'Dongnong 50'. To examine the function of GmESR1, transgenic Arabidopsis (Arabidopsis thaliana) and soybean plants overexpressing GmESR1 were generated. In Arabidopsis, overexpression of GmESR1 resulted in accelerated seed germination, and seedling shoot and root elongation. In soybean overexpression of GmESR1 also led to faster seed germination, and shoot and root elongation. GmESR1 specifically bound to the GCC-box. The results provide a foundation for the establishment of an efficient and stable transformation system for soybean.
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Affiliation(s)
- Chao Zhang
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Xiaodong Wu
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Binbin Zhang
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Qingshan Chen
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Ming Liu
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Dawei Xin
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Zhaoming Qi
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Sinan Li
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Yanlong Ma
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Lingshuang Wang
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Yangmei Jin
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Wenbin Li
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - Xiaoxia Wu
- Soybean Research Institute, Key Laboratory of Soybean Biology of Chinese Education Ministry, Northeast Agricultural University, Harbin, Heilongjiang province, People’s Republic of China
| | - An-yu Su
- College of Resources and Environment, Northeast Agricultural University. Harbin, Heilongjiang province, People’s Republic of China
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Permyakova NV, Uvarova EA, Deineko EV. State of research in the field of the creation of plant vaccines for veterinary use. RUSSIAN JOURNAL OF PLANT PHYSIOLOGY: A COMPREHENSIVE RUSSIAN JOURNAL ON MODERN PHYTOPHYSIOLOGY 2015; 62:23-38. [PMID: 32214753 PMCID: PMC7089518 DOI: 10.1134/s1021443715010100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2014] [Indexed: 06/08/2023]
Abstract
Transgenic plants as an alternative of costly systems of recombinant immunogenic protein expression are the source for the production of cheap and highly efficient biotherapeuticals of new generation, including plant vaccines. In the present review, possibilities of plant system application for the production of recombinant proteins for veterinary use are considered, the history of the "edible vaccine" concept is briefly summarized, advantages and disadvantages of various plant systems for the expression of recombinant immunogenic proteins are discussed. The list of recombinant plant vaccines for veterinary use, which are at different stages of clinical trials, is presented.
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Affiliation(s)
- N. V. Permyakova
- Institute of Cytology and Genetics, Rusian Academy of Sciences, Siberian Branch, pr. Lavrent’eva 10, Novosibirsk, 630090 Russia
| | - E. A. Uvarova
- Institute of Cytology and Genetics, Rusian Academy of Sciences, Siberian Branch, pr. Lavrent’eva 10, Novosibirsk, 630090 Russia
| | - E. V. Deineko
- Institute of Cytology and Genetics, Rusian Academy of Sciences, Siberian Branch, pr. Lavrent’eva 10, Novosibirsk, 630090 Russia
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Zagoskina NV, Pryadekhina EV, Lapshin PV, Yur’eva NO, Goldenkova-Pavlova IV. Morphophysiological and biochemical characteristics of potato plants with various expression rates of the Δ12 acyl-lipid desaturase gene. BIOL BULL+ 2014. [DOI: 10.1134/s1062359014020101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Motte H, Vereecke D, Geelen D, Werbrouck S. The molecular path to in vitro shoot regeneration. Biotechnol Adv 2014; 32:107-21. [DOI: 10.1016/j.biotechadv.2013.12.002] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 11/20/2013] [Accepted: 12/08/2013] [Indexed: 10/25/2022]
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Tarkowski P, Vereecke D. Threats and opportunities of plant pathogenic bacteria. Biotechnol Adv 2013; 32:215-29. [PMID: 24216222 DOI: 10.1016/j.biotechadv.2013.11.001] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2013] [Revised: 10/22/2013] [Accepted: 11/03/2013] [Indexed: 02/08/2023]
Abstract
Plant pathogenic bacteria can have devastating effects on plant productivity and yield. Nevertheless, because these often soil-dwelling bacteria have evolved to interact with eukaryotes, they generally exhibit a strong adaptivity, a versatile metabolism, and ingenious mechanisms tailored to modify the development of their hosts. Consequently, besides being a threat for agricultural practices, phytopathogens may also represent opportunities for plant production or be useful for specific biotechnological applications. Here, we illustrate this idea by reviewing the pathogenic strategies and the (potential) uses of five very different (hemi)biotrophic plant pathogenic bacteria: Agrobacterium tumefaciens, A. rhizogenes, Rhodococcus fascians, scab-inducing Streptomyces spp., and Pseudomonas syringae.
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Affiliation(s)
- Petr Tarkowski
- Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 11, CZ-78371 Olomouc, Czech Republic.
| | - Danny Vereecke
- Department of Applied Biosciences, Faculty of Bioscience Engineering, Ghent University, Valentin Vaerwyckweg 1, BE-9000 Ghent, Belgium.
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