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Rajagopal S, Bogaard HJ, Elbaz MSM, Freed BH, Remy-Jardin M, van Beek EJR, Gopalan D, Kiely DG. Emerging multimodality imaging techniques for the pulmonary circulation. Eur Respir J 2024:2401128. [PMID: 39209480 DOI: 10.1183/13993003.01128-2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Accepted: 06/11/2024] [Indexed: 09/04/2024]
Abstract
Pulmonary hypertension (PH) remains a challenging condition to diagnose, classify and treat. Current approaches to the assessment of PH include echocardiography, ventilation/perfusion scintigraphy, cross-sectional imaging using computed tomography and magnetic resonance imaging, and right heart catheterisation. However, these approaches only provide an indirect readout of the primary pathology of the disease: abnormal vascular remodelling in the pulmonary circulation. With the advent of newer imaging techniques, there is a shift toward increased utilisation of noninvasive high-resolution modalities that offer a more comprehensive cardiopulmonary assessment and improved visualisation of the different components of the pulmonary circulation. In this review, we explore advances in imaging of the pulmonary vasculature and their potential clinical translation. These include advances in diagnosis and assessing treatment response, as well as strategies that allow reduced radiation exposure and implementation of artificial intelligence technology. These emerging modalities hold the promise of developing a deeper understanding of pulmonary vascular disease and the impact of comorbidities. They also have the potential to improve patient outcomes by reducing time to diagnosis, refining classification, monitoring treatment response and improving our understanding of disease mechanisms.
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Affiliation(s)
| | - Harm J Bogaard
- Department of Pulmonology, Amsterdam University Medical Center, Location VU Medical Center, Amsterdam, The Netherlands
| | - Mohammed S M Elbaz
- Department of Radiology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA
| | - Benjamin H Freed
- Feinberg School of Medicine, Northwestern University, Chicago, IL, USA
| | | | - Edwin J R van Beek
- Edinburgh Imaging, Queens Medical Research Institute, University of Edinburgh, Edinburgh, UK
| | - Deepa Gopalan
- Department of Radiology, Imperial College Healthcare NHS Trust, London, UK
| | - David G Kiely
- Sheffield Pulmonary Vascular Disease Unit and NIHR Biomedical Research Centre Sheffield, Royal Hallamshire Hospital, Sheffield, UK
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2
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Grass DM, Malek G, Taïeb HM, Ittah E, Richard H, Reznikov N, Laverty S. Characterization and quantification of in-vitro equine bone resorption in 3D using μCT and deep learning-aided feature segmentation. Bone 2024; 185:117131. [PMID: 38777311 DOI: 10.1016/j.bone.2024.117131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Revised: 05/18/2024] [Accepted: 05/19/2024] [Indexed: 05/25/2024]
Abstract
High cyclic strains induce formation of microcracks in bone, triggering targeted bone remodeling, which entails osteoclastic resorption. Racehorse bone is an ideal model for studying the effects of high-intensity loading, as it is subject to focal formation of microcracks and subsequent bone resorption. The volume of resorption in vitro is considered a direct indicator of osteoclast activity but indirect 2D measurements are used more often. Our objective was to develop an accurate, high-throughput method to quantify equine osteoclast resorption volume in μCT 3D images. Here, equine osteoclasts were cultured on equine bone slices and imaged with μCT pre- and postculture. Individual resorption events were then isolated and analyzed in 3D. Modal volume, maximum depth, and aspect ratio of resorption events were calculated. A convolutional neural network (CNN U-Net-like) was subsequently trained to identify resorption events on post-culture μCT images alone, without the need for pre-culture imaging, using archival bone slices with known resorption areas and paired CTX-I biomarker levels in culture media. 3D resorption volume measurements strongly correlated with both the CTX-I levels (p < 0.001) and area measurements (p < 0.001). Our 3D analysis shows that the shapes of resorption events form a continuous spectrum, rather than previously reported pit and trench categories. With more extensive resorption, shapes of increasing complexity appear, although simpler resorption cavity morphologies (small, rounded) remain most common, in acord with the left-hand limit paradigm. Finally, we show that 2D measurements of in vitro osteoclastic resorption are a robust and reliable proxy.
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Affiliation(s)
- Debora M Grass
- Comparative Orthopaedic Research Laboratory, Department of Clinical Sciences, Faculty of Veterinary Medicine, University of Montreal, 3200 Sicotte, St-Hyacinthe, QC J2S 2M2, Canada
| | - Gwladys Malek
- Comparative Orthopaedic Research Laboratory, Department of Clinical Sciences, Faculty of Veterinary Medicine, University of Montreal, 3200 Sicotte, St-Hyacinthe, QC J2S 2M2, Canada
| | - Hubert M Taïeb
- Department of Bioengineering, Faculty of Engineering, McGill University, 3480 University Street, Montreal, Quebec H3A 0E9, Canada
| | - Eran Ittah
- Department of Bioengineering, Faculty of Engineering, McGill University, 3480 University Street, Montreal, Quebec H3A 0E9, Canada
| | - Hélène Richard
- Comparative Orthopaedic Research Laboratory, Department of Clinical Sciences, Faculty of Veterinary Medicine, University of Montreal, 3200 Sicotte, St-Hyacinthe, QC J2S 2M2, Canada
| | - Natalie Reznikov
- Department of Bioengineering, Faculty of Engineering, McGill University, 3480 University Street, Montreal, Quebec H3A 0E9, Canada
| | - Sheila Laverty
- Comparative Orthopaedic Research Laboratory, Department of Clinical Sciences, Faculty of Veterinary Medicine, University of Montreal, 3200 Sicotte, St-Hyacinthe, QC J2S 2M2, Canada.
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Hu Y, Chen X, Chu Z, Tian Q, Luo L, Gan Z, Zhong J, Yuan Z, Zhu B, Dong W. Micro-Computed Tomography Analysis and Histological Observation of the Screw-Bone Interface of Novel Porous Scaffold Core Pedicle Screws and Hollow Lateral Hole Pedicle Screws: A Comparative Study in Bama Pigs. World Neurosurg 2024:S1878-8750(24)01263-4. [PMID: 39059721 DOI: 10.1016/j.wneu.2024.07.123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2024] [Accepted: 07/17/2024] [Indexed: 07/28/2024]
Abstract
OBJECTIVE Screw loosening is a common complication of pedicle screw internal fixation surgery. This study aimed to investigate whether the application of a porous scaffold structure can increase the contact area between screws and bone tissue by comparing the bone ingrowth and screw-bone interface of porous scaffold core pedicle screws (PSCPSs) and hollow lateral hole pedicle screws (HLHPSs) in the lumbar spine of Bama pigs. METHODS Sixteen pedicle screws of both types were implanted into the bilateral pedicles of the L1-4 vertebrae of 2 Bama pigs. All Bama pigs were sacrificed and the lumbar spine was freed into individual vertebrae at 16 weeks postoperatively. After the vertebrae were made into screw-centered specimens, micro-computed tomography analysis and histological observation were performed to assess the screw-bone interface and bone growth around and within the screws. RESULTS We found that the bone condition around PSCPSs and HLHPSs did not show significant differences on micro-computed tomography three-dimensional reconstruction images. CT transverse views showed different bone growth inside the 2 screws. In PSCPSs, bone tissue was seen to fill the internal pores and was evenly distributed around each strut. Inside HLHPSs, bone growth was confined to 1 side of the screw and did not fill the entire cavity. Osteometric analysis showed that bone volume fraction and trabecular number, the parameters representing bone mass, were higher in PSCPSs than in HLHPSs. These differences were not statistically significant (P > 0.05). Histological observations visualized that the osseointegration within PSCPSs was superior to that of HLHPSs, and the tight integration of bone tissue with the porous scaffold resulted in a larger screw-bone integration area in PSCPSs than in HLHPSs. CONCLUSIONS Compared with HLHPSs, PSCPSs possessing a porous scaffold core could promote bone ingrowth and osseointegration, resulting in an effective enhancement of the combined area of the screw-bone interface.
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Affiliation(s)
- Yong Hu
- Department of Spine Surgery, Ningbo No. 6 Hospital of Ningbo University, Ningbo, China.
| | - Xijiong Chen
- Health Science Center, Ningbo University, Ningbo, China
| | - Zhentao Chu
- Health Science Center, Ningbo University, Ningbo, China
| | - Quanliang Tian
- Department of Spine Surgery, Qianxinan Autonomous Prefecture Hospital of TCM, Xingyi, China
| | - Linwei Luo
- Health Science Center, Ningbo University, Ningbo, China
| | - Zhiwei Gan
- Health Science Center, Ningbo University, Ningbo, China
| | - Jianbin Zhong
- Department of Spine Surgery, Ningbo No. 6 Hospital of Ningbo University, Ningbo, China
| | - Zhenshan Yuan
- Department of Spine Surgery, Ningbo No. 6 Hospital of Ningbo University, Ningbo, China
| | - Bingke Zhu
- Department of Spine Surgery, Ningbo No. 6 Hospital of Ningbo University, Ningbo, China
| | - Weixin Dong
- Department of Spine Surgery, Ningbo No. 6 Hospital of Ningbo University, Ningbo, China
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4
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Groß M, Mail M, Wrigley O, Debastiani R, Scherer T, Amelung W, Braun M. Plastic Fruit Stickers in Industrial Composting─Surface and Structural Alterations Revealed by Electron Microscopy and Computed Tomography. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2024; 58:7124-7132. [PMID: 38599582 PMCID: PMC11044595 DOI: 10.1021/acs.est.3c08734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 02/15/2024] [Accepted: 02/26/2024] [Indexed: 04/12/2024]
Abstract
Often large quantities of plastics are found in compost, with price look-up stickers being a major but little-explored component in the contamination path. Stickers glued to fruit or vegetable peels usually remain attached to the organic material despite sorting processes in the composting plant. Here, we investigated the effects of industrial composting on the structural alterations of these stickers. Commercial polypropylene (PP) stickers on banana peels were added to a typical organic material mixture for processing in an industrial composting plant and successfully resampled after a prerotting (11 days) and main rotting step (25 days). Afterward, both composted and original stickers were analyzed for surface and structural changes via scanning electron microscopy, Fourier-transform infrared spectroscopy, and micro- and nano-X-ray computed tomography (CT) combined with deep learning approaches. The composting resulted in substantial surface changes and degradation in the form of microbial colonization, deformation, and occurrence of cracks in all stickers. Their pore volumes increased from 16.7% in the original sticker to 26.3% at the end of the compost process. In a similar way, the carbonyl index of the stickers increased. Micro-CT images additionally revealed structural changes in the form of large adhesions that penetrated the surface of the sticker. These changes were accompanied by delamination after 25 days of composting, thus overall hinting at the degradation of the stickers and the subsequent formation of smaller microplastic pieces.
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Affiliation(s)
- Max Groß
- Institute
of Crop Science and Resource Conservation (INRES), Soil Science and
Soil Ecology, University of Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Matthias Mail
- Institute
of Nanotechnology (INT), Karlsruhe Institute
of Technology (KIT), Kaiserstr. 12, 76131 Karlsruhe, Germany
- Karlsruhe
Nano Micro Facility (KNMFi), Karlsruhe Institute
of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Olivia Wrigley
- Institute
of Crop Science and Resource Conservation (INRES), Soil Science and
Soil Ecology, University of Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Rafaela Debastiani
- Institute
of Nanotechnology (INT), Karlsruhe Institute
of Technology (KIT), Kaiserstr. 12, 76131 Karlsruhe, Germany
- Karlsruhe
Nano Micro Facility (KNMFi), Karlsruhe Institute
of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Torsten Scherer
- Institute
of Nanotechnology (INT), Karlsruhe Institute
of Technology (KIT), Kaiserstr. 12, 76131 Karlsruhe, Germany
- Karlsruhe
Nano Micro Facility (KNMFi), Karlsruhe Institute
of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Wulf Amelung
- Institute
of Crop Science and Resource Conservation (INRES), Soil Science and
Soil Ecology, University of Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Melanie Braun
- Institute
of Crop Science and Resource Conservation (INRES), Soil Science and
Soil Ecology, University of Bonn, Nussallee 13, 53115 Bonn, Germany
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Nitschke BM, Beltran FO, Hahn MS, Grunlan MA. Trends in bioactivity: inducing and detecting mineralization of regenerative polymeric scaffolds. J Mater Chem B 2024; 12:2720-2736. [PMID: 38410921 PMCID: PMC10935659 DOI: 10.1039/d3tb02674d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Accepted: 02/14/2024] [Indexed: 02/28/2024]
Abstract
Due to limitations of biological and alloplastic grafts, regenerative engineering has emerged as a promising alternative to treat bone defects. Bioactive polymeric scaffolds are an integral part of such an approach. Bioactivity importantly induces hydroxyapatite mineralization that promotes osteoinductivity and osseointegration with surrounding bone tissue. Strategies to confer bioactivity to polymeric scaffolds utilize bioceramic fillers, coatings and surface treatments, and additives. These approaches can also favorably impact mechanical and degradation properties. A variety of fabrication methods are utilized to prepare scaffolds with requisite morphological features. The bioactivity of scaffolds may be evaluated with a broad set of techniques, including in vitro (acellular and cellular) and in vivo methods. Herein, we highlight contemporary and emerging approaches to prepare and assess scaffold bioactivity, as well as existing challenges.
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Affiliation(s)
- Brandon M Nitschke
- Department of Biomedical Engineering, Texas A&M University, College Station, TX 77843, USA.
| | - Felipe O Beltran
- Department of Materials Science & Engineering, Texas A&M University, College Station, TX 77843, USA
| | - Mariah S Hahn
- Department of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - Melissa A Grunlan
- Department of Biomedical Engineering, Texas A&M University, College Station, TX 77843, USA.
- Department of Materials Science & Engineering, Texas A&M University, College Station, TX 77843, USA
- Department of Chemistry, Texas A&M University, College Station, TX 77843, USA
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6
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Zhang G, Jia X, Li Z, Wang Q, Gu H, Liu Y, Bai Z, Mao H. Comprehensively characterizing heterogeneous and transversely isotropic properties of femur cortical bones. J Mech Behav Biomed Mater 2024; 151:106387. [PMID: 38246092 DOI: 10.1016/j.jmbbm.2024.106387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 12/23/2023] [Accepted: 01/07/2024] [Indexed: 01/23/2024]
Abstract
Comprehensive characterization of the transversely isotropic mechanical properties of long bones along both the longitudinal and circumferential gradients is crucial for developing accurate mathematical models and studying bone biomechanics. In addition, mechanical testing to derive elastic, plastic, and failure properties of bones is essential for modeling plastic deformation and failure of bones. To achieve these, we machined a total of 336 cortical specimens, including 168 transverse and 168 longitudinal specimens, from four different quadrants of seven different sections of 3 bovine femurs. We conducted three-point bending tests of these specimens at a loading rate of 0.02 mm/s. Young's modulus, yield stress, tangential modulus, and effective plastic strain for each specimen were derived from correction equations based on classical beam theory. Our statistical analysis reveals that the longitudinal gradient has a significant effect on the Young's modulus, yield stress, and tangential modulus of both longitudinal and transverse specimens, whereas the circumferential gradient significantly influences the Young's modulus, yield stress, and tangential modulus of transverse specimens only. The differences in Young's modulus and yield stress between longitudinal specimens from different sections are greater than 40%, whereas those between transverse specimens are approximately 30%. The Young's modulus and yield stress of transverse specimens in the anterior quadrant were 18.81%/15.46% and 18.34%/14.88% higher than those in the posterior and lateral quadrants, respectively. There is no significant interaction between the longitudinal gradient and the circumferential gradient. Considering the transverse isotropy, it is crucial to consider loading direction when investigating the impact of circumferential gradients in the anterior, lateral, medial, and posterior directions. Our findings indicate that the conventional assumption of homogeneity in simulating the cortical bone of long bones may have limitations, and researchers should consider the anatomical position and loading direction of femur specimens for precise prediction of mechanical responses.
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Affiliation(s)
- Guanjun Zhang
- State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha, 410082, China
| | - Xiaohang Jia
- State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha, 410082, China
| | - Zhentao Li
- State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha, 410082, China
| | - Qinhuai Wang
- State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha, 410082, China
| | - Hongyue Gu
- State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha, 410082, China
| | - Yu Liu
- State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha, 410082, China
| | - Zhonghao Bai
- State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha, 410082, China
| | - Haojie Mao
- Department of Mechanical and Materials Engineering, Faculty of Engineering, School of Biomedical Engineering, Western University, London, ON, N6A 5B9, Canada.
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Fu SJ, Yang EC. Neuroplasticity in honey bee brains: An enhanced micro-computed tomography protocol for precise mushroom body volume measurement. J Neurosci Methods 2024; 403:110040. [PMID: 38135123 DOI: 10.1016/j.jneumeth.2023.110040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Revised: 10/31/2023] [Accepted: 12/17/2023] [Indexed: 12/24/2023]
Abstract
BACKGROUND In insect brains, mushroom bodies are associated with memory and learning behavior. It has been demonstrated that the volume of the mushroom bodies in the brain of a worker honey bee changes during the adult stage. Changes in mushroom body volume imply high neuroplasticity in the brains and may be related to the age polyethism of honey bees. A suitable volume measurement method is needed to understand the correlation between behavioral changes and mushroom body volume changes in honey bees. NEW METHOD We developed a new protocol for insect micro-computed tomography by modifying a previously reported method. Permount™ mounting medium was used as the embedding medium for micro-computed tomography scanning. RESULTS This protocol can generate images with high contrast inside the brain and reduce the marked shape changes during specimen processing. From the resulting high-contrast images, we used freeware to generate a three-dimensional model and calculate the volumes of the mushroom bodies in honey bees. The measured volumes of the mushroom bodies were larger than the values reported in most previous studies. There was no significant difference between the left and right mushroom body volumes, but the volumes of honey bee mushroom bodies significantly increased with age. COMPARISON WITH EXISTING METHODS Previous protocols for micro-computed tomography using dried samples would cause brain shrinkage; protocols using ethanol-preserved or resin-embedded samples generated images with lower contrast. CONCLUSIONS The embedding protocol for micro-computed tomography is suitable for calculating volume of the mushroom bodies in honey bee brains.
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Affiliation(s)
- Shang-Jui Fu
- Department of Entomology, National Taiwan University, Taiwan
| | - En-Cheng Yang
- Department of Entomology, National Taiwan University, Taiwan.
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8
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Li K, Yang Y, Wang P, Song H, Ma C, Zhang Y, Dang X, Shi J, Zhang S, Li Z, Wang X. Exploring the micromorphological characteristics of adult lower cervical vertebrae based on micro-computed tomography. Sci Rep 2023; 13:12400. [PMID: 37524928 PMCID: PMC10390556 DOI: 10.1038/s41598-023-39703-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Accepted: 07/29/2023] [Indexed: 08/02/2023] Open
Abstract
We will use micro-computed tomography to scan 31 sets of the adult lower cervical vertebrae (155 vertebrae) to observe the morphological characteristics and direction of trabeculae in the lower cervical vertebrae by outlining and reconstructing the regions of interest and to calculate the variation laws of the microstructure in the regions of interest to reveal their structural characteristics and weak areas. As a result, the images showed that the trabeculae in the lower cervical pedicle near the medial and lateral cortices were relatively dense, and their bone plates were lamellar. There were cavities between the superior and inferior articular processes where the ossification centers had not been absorbed after ossified. The lamellar trabeculae in the vertebral plates near the cortical bones were only 1-2 layers, extended and transformed into rod-shaped trabeculae in a radial shape toward the medullary space. The lamellar trabeculae of the vertebral plate extend over the spinous process near the cortical bone. The statistical results of the trabeculae's morphological parameters showed significant differences in bone volume fraction values among the four parts (P < 0.05). There were substantial differences in BS/BV, except for no differences between the pedicle and the vertebral plate (P < 0.05). There was a significant difference in trabecular pattern factor values between the articular process, the spinous process, and the vertebral plate (P < 0.05) and a significant difference between the pedicle, the spinous process, and the vertebral plate (P < 0.05). There were no significant differences in trabecular bone thickness and trabecular space values among the four parts (P < 0.05). The anatomical microstructural perspective confirms that the optimal choice is internal fixation via the pedicle. If using pedicle screws, the nail tract needs to be placed into the spinous process to increase its holding power and resistance to extraction.
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Affiliation(s)
- Kun Li
- School of Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing, 100029, China
- Human Anatomy Teaching and Research Section, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Yang Yang
- Graduate School, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Peng Wang
- School of Clinical Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Haoyu Song
- School of Clinical Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Chunying Ma
- School of Clinical Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Yansong Zhang
- School of Clinical Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Xingye Dang
- School of Clinical Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Jun Shi
- Physiology Teaching and Research Section, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Shaojie Zhang
- Human Anatomy Teaching and Research Section, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
- Digital Medicine Center, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Zhijun Li
- School of Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing, 100029, China
- Human Anatomy Teaching and Research Section, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China
| | - Xing Wang
- Human Anatomy Teaching and Research Section, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China.
- Digital Medicine Center, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, 010059, Inner Mongolia, China.
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Papazoglou AS, Karagiannidis E, Liatsos A, Bompoti A, Moysidis DV, Arvanitidis C, Tsolaki F, Tsagkaropoulos S, Theocharis S, Tagarakis G, Michaelson JS, Herrmann MD. Volumetric Tissue Imaging of Surgical Tissue Specimens Using Micro-Computed Tomography: An Emerging Digital Pathology Modality for Nondestructive, Slide-Free Microscopy-Clinical Applications of Digital Pathology in 3 Dimensions. Am J Clin Pathol 2023; 159:242-254. [PMID: 36478204 DOI: 10.1093/ajcp/aqac143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Accepted: 10/14/2022] [Indexed: 12/14/2022] Open
Abstract
OBJECTIVES Micro-computed tomography (micro-CT) is a novel, nondestructive, slide-free digital imaging modality that enables the acquisition of high-resolution, volumetric images of intact surgical tissue specimens. The aim of this systematic mapping review is to provide a comprehensive overview of the available literature on clinical applications of micro-CT tissue imaging and to assess its relevance and readiness for pathology practice. METHODS A computerized literature search was performed in the PubMed, Scopus, Web of Science, and CENTRAL databases. To gain insight into regulatory and financial considerations for performing and examining micro-CT imaging procedures in a clinical setting, additional searches were performed in medical device databases. RESULTS Our search identified 141 scientific articles published between 2000 and 2021 that described clinical applications of micro-CT tissue imaging. The number of relevant publications is progressively increasing, with the specialties of pulmonology, cardiology, otolaryngology, and oncology being most commonly concerned. The included studies were mostly performed in pathology departments. Current micro-CT devices have already been cleared for clinical use, and a Current Procedural Terminology (CPT) code exists for reimbursement of micro-CT imaging procedures. CONCLUSIONS Micro-CT tissue imaging enables accurate volumetric measurements and evaluations of entire surgical specimens at microscopic resolution across a wide range of clinical applications.
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Affiliation(s)
| | - Efstratios Karagiannidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Alexandros Liatsos
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Andreana Bompoti
- Diagnostic Imaging, Peterborough City Hospital, North West Anglia NHS Foundation Trust, Peterborough, UK
| | - Dimitrios V Moysidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Christos Arvanitidis
- Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Heraklion, Crete, Greece.,LifeWatch ERIC, Sector II-II, Seville, Spain
| | - Fani Tsolaki
- Department of Cardiothoracic Surgery, AHEPA University Hospital, Thessaloniki, Greece
| | | | - Stamatios Theocharis
- First Department of Pathology, National and Kapoditrian University of Athens, Athens, Greece
| | - Georgios Tagarakis
- Department of Cardiothoracic Surgery, AHEPA University Hospital, Thessaloniki, Greece
| | - James S Michaelson
- Department of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA
| | - Markus D Herrmann
- Department of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA
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10
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Muro S, Akita K. Novel combination method of wide-range serial sectioning and 3D reconstruction visualizing both macro-level dynamics and micro-level interactions in an attempt to analyze the female pelvic floor. Anat Sci Int 2023:10.1007/s12565-023-00710-0. [PMID: 36882587 DOI: 10.1007/s12565-023-00710-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 02/23/2023] [Indexed: 03/09/2023]
Abstract
The present report presents details of the method for combining wide-range serial sectioning and 3D reconstruction using an adult cadaver. For several decades, anatomists have utilized a variety of non-destructive three-dimensional (3D) visualization methods to complement gross anatomical analysis methods. These include vascular casting for the visualization of vascular morphology and micro-CT for the visualization of bone morphology. However, these conventional methods are restricted by the properties and sizes of the target structures. Here, we introduce a method to conduct 3D reconstruction based on wide-range serial histological sections from adult cadavers, which overcomes previous restrictions. An attempt at 3D visualization of the female pelvic floor muscles provides a detailed description of the procedure. Supplemental video and 3D PDF files allow multifaceted observation of 3D images. Wide-range serial sectioning visualizes morphology beyond the scope of conventional methods, while 3D reconstruction enables non-destructive 3D visualization of any structure that can be observed on a histological section, including skeletal muscle, smooth muscle, ligaments, cartilage, connective tissue, blood vessels, nerves, lymph nodes, and glands. The novel combination of both methods is instrumental in meso-anatomy, a discipline intermediate between macro-anatomy and micro-anatomy.
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Affiliation(s)
- Satoru Muro
- Department of Clinical Anatomy, Tokyo Medical and Dental University, 1-5-45 Yushima, Bunkyo-ku, Tokyo, 113-8510, Japan.
| | - Keiichi Akita
- Department of Clinical Anatomy, Tokyo Medical and Dental University, 1-5-45 Yushima, Bunkyo-ku, Tokyo, 113-8510, Japan
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Robinson JA, Rennie M, Clearwater M, Holland DJ, van den Berg AK, Watson M. Examination of embolisms in maple and birch saplings utilising microCT. Micron 2023; 168:103438. [PMID: 36889230 DOI: 10.1016/j.micron.2023.103438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Revised: 02/27/2023] [Accepted: 02/27/2023] [Indexed: 03/05/2023]
Abstract
We demonstrate the application of synchrotron x-ray microtomography (microCT) to non-invasively examine the internal structure of a maple and birch sapling. We show that, through the use of standard image analysis techniques, embolised vessels can be extracted from reconstructed slices of the stem. By combining these thresholded images with connectivity analysis, we map out the embolisms within the sapling in three dimensions and evaluate the size distribution, showing that large embolisms over 0.005 mm3 in volume compose the majority of the saplings' total embolised volume. Finally we evaluate the radial distribution of embolisms, showing that in maple fewer embolisms are present towards the cambium, while birch has a more uniform distribution.
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Affiliation(s)
- James A Robinson
- Biomolecular Interaction Center & Chemical and Process Engineering Department, University of Canterbury, Christchurch, New Zealand.
| | - Matt Rennie
- Biomolecular Interaction Center & Chemical and Process Engineering Department, University of Canterbury, Christchurch, New Zealand
| | - Mike Clearwater
- School of Science, University of Waikato, Hamilton, New Zealand
| | - Daniel J Holland
- Biomolecular Interaction Center & Chemical and Process Engineering Department, University of Canterbury, Christchurch, New Zealand
| | - Abby K van den Berg
- Proctor Maple Research Center, University of Vermont, Underhill, VT, United States
| | - Matthew Watson
- Biomolecular Interaction Center & Chemical and Process Engineering Department, University of Canterbury, Christchurch, New Zealand
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12
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Mahani H, Taheri A, Askari M. Detection performance of pixelated lutetium-yttrium oxyorthosilicate (LYSO) scintillators for high-resolution photon-counting CT imaging. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2023; 94:023308. [PMID: 36859068 DOI: 10.1063/5.0125952] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Accepted: 02/02/2023] [Indexed: 06/18/2023]
Abstract
High-resolution photon-counting detector (PCD) computed tomography (CT) imaging is increasingly used for several applications. Recent technological advances in CT instrumentation have introduced various types of radiation detectors. Therefore, this work aims at evaluating the lutetium-yttrium oxyorthosilicate (LYSO) scintillator for use in PCD CT from a detector point of view. To do so, a mini-CT prototype was designed and constructed based on the pixelated LYSO blocks. The detector comprises four 10 × 10 linearly arranged LYSO blocks coupled with four position-sensitive photomultiplier tubes. The prototype utilizes a point gamma-ray source along with a cone-beam collimator. An in-home MATLAB-based data processing software package was also developed for storing the list-mode data, event positioning, and energy windowing. A set of experiments were conducted to assess the performance of the constructed energy-resolved LYSO:Ce detector for mini-CT imaging. The results show good crystal identification for all blocks with a maximum peak-to-valley ratio of 3.48. In addition, the findings confirm that the developed detector is position-sensitive. The 20% energy window provides an optimal performance by simultaneously providing good crystal identification and a scatter removal factor of 0.71. A 96% uniformity was also observed when the detector was irradiated with a uniform flood. The spatial resolution of the mini-CT prototype in the x- and y-directions was calculated to be 0.9 and 0.93 mm, respectively, corrected for a magnification factor of 2.5. It is concluded that the pixelated LYSO crystal is a promising alternative to the current detectors and would be the scintillator of choice for high-resolution PCD CT imaging tasks.
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Affiliation(s)
- Hojjat Mahani
- Radiation Applications Research School, Nuclear Science and Technology Research Institute, P.O. Box 14395-836, Tehran, Iran
| | - Ali Taheri
- Radiation Applications Research School, Nuclear Science and Technology Research Institute, P.O. Box 14395-836, Tehran, Iran
| | - Mojtaba Askari
- Radiation Applications Research School, Nuclear Science and Technology Research Institute, P.O. Box 14395-836, Tehran, Iran
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13
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Zwiauer-Wolfbeisser V, Handschuh S, Tichy A, Nell B. Morphology and volume of Meibomian glands ex vivo pre and post partial tarsal plate excision, cryotherapy and laser therapy in the dog using microCT. Vet Ophthalmol 2023; 26 Suppl 1:98-108. [PMID: 36692053 DOI: 10.1111/vop.13057] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Revised: 12/14/2022] [Accepted: 12/22/2022] [Indexed: 01/25/2023]
Abstract
OBJECTIVE To determine the morphology and volume of Meibomian glands (MG) of dogs with microCT before and after partial tarsal plate excision (PTPE), cryotherapy, and laser therapy. PROCEDURE MicroCT scans were made of 12 upper lids (ULs) and lower lids (LLs) of 12 dogs. After undergoing PTPE, 10 ULs and LLs were scanned again, and one UL and one LL was scanned after laser therapy and one UL and one LL after cryotherapy. RESULTS The length of the area containing MGs did not change pre- and post-PTPE, and cryo- or laser therapy. The mean number of MGs in the ULs and LLs was 30.50 and 29.42, respectively, and did not change during the procedures. The average length of one individual MG was 2.60 mm. The mean volume of MGs in the 10 ULs and LLs pre-PTPE was 21.45 and 17.2 mm3 , respectively, and 12.84 and 11.25 mm3 in the UL and LL after PTPE, respectively. The mean volume of MGs decreased from 29.78 mm3 precryotherapy to 28.91 mm3 post-treatment and in the lower eyelid from 22.87 to 22.4 mm3 after cryotherapy. The mean volume of MGs in the UL and LL before laser therapy was 8.95 and 6.78 mm3 , respectively, and after 9.25 and 6.38 mm3 , respectively. CONCLUSION MicroCT is a valuable tool to determine the morphology and the volume of MGs and to demonstrate changes that occur after PTPE, laser-, and cryotherapy. There is no need for additional preparation, such as staining, of the specimen prior to scanning.
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Affiliation(s)
| | - Stephan Handschuh
- VetCore Facility for Research, University of Veterinary Medicine, Vienna, Austria
| | - Alexander Tichy
- Department of Biomedical Sciences, University of Veterinary Medicine, Vienna, Austria
| | - Barbara Nell
- Department of Companion Animals and Horses, University of Veterinary Medicine, Vienna, Austria
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14
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Li K, Ji Y, Shi J, Zhang S, Song H, Wang P, Ma C, Zhang Y, Dang Y, Ma Y, Wang X, Li Z. Examination of the microstructures of the lower cervical facet based on micro-computed tomography: A cadaver study. Medicine (Baltimore) 2022; 101:e31805. [PMID: 36550803 PMCID: PMC9771288 DOI: 10.1097/md.0000000000031805] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
The cervical facet has complicated 3D microstructures and inhomogeneities. The cervical facet joint, which also participates in the formation, plays a certain role in regulating and limiting the movement of the spine. Correct identification and evaluation of its microstructure can help in the diagnosis of orthopedic disease and predict early phases of fracture risk. To evaluate the safety of the cervical spine by measuring and analyzing the microstructures and morphometric parameters of bone trabeculae in the normal cervical facet with high-resolution 3D micro-computed tomography. Thirty-one sets of C3 to C7 lower cervical vertebrae (155 vertebrae) were scanned using micro-computed tomography. The morphological characteristics and direction of trabecular bone in the facet of the lower cervical vertebrae were observed by selecting and rebuilding the areas of interest, and the changes in the microstructure of the areas of interest were calculated to reveal the structural characteristics and weak areas. Images indicated an ossified center between the superior and inferior articular processes of the lower cervical spine. The cellular bone trabeculae of the articular process had complex reticular microstructures. The trabecular bone plate near the cortical bone was lamellar and relatively dense, and it extended around and transformed into a network structure, and then into the rod-shaped trabecular bone. The rod-shaped trabeculae converged with the plate-shaped trabeculae with only 1 to 2 layers surrounding the trabeculae cavity. Statistical results of the morphological parameters of the trabecular bone showed that trabecular bone volume fraction values were significantly higher for C7 than for C3 to C6 (P < .05). There were significant differences between C7 and C3 to C5 and between C6 and C4 in bone surface area/bone volume (P < .05). There was a significant difference between C7 and C3 to C6 in trabecular bone thickness values (P < .05). The degree of anisotropy value was significantly smaller for C3 than for C6 and C7 (P < .05). The changes in the C3 to C7 microstructure were summarized in this study. The loading capacity and stress of the C7 articular process tended to be limited, and the risk of injury tended to be higher for the C7 articular process.
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Affiliation(s)
- Kun Li
- Beijing University of Chinese Medicine School of Traditional Chinese Medicine, Beijing, China
- Human Anatomy Teaching and Research Section (Digital Medical Center), Inner Mongolia Medical University Basic Medical College, Hohhot, China
| | - Yucheng Ji
- Human Anatomy Teaching and Research Section (Digital Medical Center), Inner Mongolia Medical University Basic Medical College, Hohhot, China
| | - Jun Shi
- Department of Physiology, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, China
| | - Shaojie Zhang
- Human Anatomy Teaching and Research Section (Digital Medical Center), Inner Mongolia Medical University Basic Medical College, Hohhot, China
| | - Haoyu Song
- Department of Physiology, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, China
| | - Peng Wang
- Department of Physiology, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, China
| | - Chunying Ma
- Department of Physiology, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, China
| | - Yansong Zhang
- Department of Physiology, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, China
| | - Yexing Dang
- Department of Physiology, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, China
| | - Yuan Ma
- Department of Physiology, School of Basic Medicine, Inner Mongolia Medical University, Hohhot, China
| | - Xing Wang
- Beijing University of Chinese Medicine School of Traditional Chinese Medicine, Beijing, China
- Human Anatomy Teaching and Research Section (Digital Medical Center), Inner Mongolia Medical University Basic Medical College, Hohhot, China
| | - Zhijun Li
- Beijing University of Chinese Medicine School of Traditional Chinese Medicine, Beijing, China
- Human Anatomy Teaching and Research Section (Digital Medical Center), Inner Mongolia Medical University Basic Medical College, Hohhot, China
- *Correspondence: Zhijun Li and Xing Wang, Beijing University of Chinese Medicine School of Traditional Chinese Medicine, Yangguang South Street, Fangshan District, Beijing 100029, China (e-mail: and )
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15
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Handschuh S, Glösmann M. Mouse embryo phenotyping using X-ray microCT. Front Cell Dev Biol 2022; 10:949184. [PMID: 36187491 PMCID: PMC9523164 DOI: 10.3389/fcell.2022.949184] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Accepted: 08/22/2022] [Indexed: 11/30/2022] Open
Abstract
Microscopic X-ray computed tomography (microCT) is a structural ex vivo imaging technique providing genuine isotropic 3D images from biological samples at micron resolution. MicroCT imaging is non-destructive and combines well with other modalities such as light and electron microscopy in correlative imaging workflows. Protocols for staining embryos with X-ray dense contrast agents enable the acquisition of high-contrast and high-resolution datasets of whole embryos and specific organ systems. High sample throughput is achieved with dedicated setups. Consequently, microCT has gained enormous importance for both qualitative and quantitative phenotyping of mouse development. We here summarize state-of-the-art protocols of sample preparation and imaging procedures, showcase contemporary applications, and discuss possible pitfalls and sources for artefacts. In addition, we give an outlook on phenotyping workflows using microscopic dual energy CT (microDECT) and tissue-specific contrast agents.
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16
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Giovannetti G, Guerrini A, Minozzi S, Panetta D, Salvadori PA. Computer tomography and magnetic resonance for multimodal imaging of fossils and mummies. Magn Reson Imaging 2022; 94:7-17. [PMID: 36084902 DOI: 10.1016/j.mri.2022.08.019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 08/26/2022] [Accepted: 08/31/2022] [Indexed: 11/24/2022]
Abstract
The study of fossils and mummies has largely benefited from the use of modern noninvasive and nondestructive imaging technologies and represents a fast developing area. In this review, we describe the emerging role of imaging based on Magnetic Resonance (MR) and Computer Tomography (CT) employed for the study of ancient remains and mummies. For each methodology, the state of the art in paleoradiology applications is described, by emphasizing new technologies developed in the field of both CT, such as micro- and nano-CT, dual-energy and multi-energy CT, and MR, with the description of novel dedicated sequences, radiofrequency coils and gradients. The complementarity of CT and MR in paleoradiology is also discussed, by pointing out what MR provides in addition to CT, with an overview on the state of the art of emerging strategies in the use of CT/MR combination for the study of a sample following a multimodal integrated approach.
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Affiliation(s)
- Giulio Giovannetti
- Institute of Clinical Physiology, National Council of Research, via G. Moruzzi 1, 56124 Pisa, Italy.
| | - Andrea Guerrini
- Gruppo Archeologico e Paleontologico Livornese, Museo di Storia Naturale del Mediterraneo, via Roma, 234, 57127 Leghorn, Italy
| | - Simona Minozzi
- Division of Paleopathology, Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, Via Roma 57, 56100 Pisa, Italy
| | - Daniele Panetta
- Institute of Clinical Physiology, National Council of Research, via G. Moruzzi 1, 56124 Pisa, Italy
| | - Piero A Salvadori
- Institute of Clinical Physiology, National Council of Research, via G. Moruzzi 1, 56124 Pisa, Italy
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17
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Han S, Lee D, Kim S, Kim HH, Jeong S, Kim J. Contrast Agents for Photoacoustic Imaging: A Review Focusing on the Wavelength Range. BIOSENSORS 2022; 12:bios12080594. [PMID: 36004990 PMCID: PMC9406114 DOI: 10.3390/bios12080594] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 07/29/2022] [Accepted: 07/31/2022] [Indexed: 11/16/2022]
Abstract
Photoacoustic imaging using endogenous chromophores as a contrast has been widely applied in biomedical studies owing to its functional imaging capability at the molecular level. Various exogenous contrast agents have also been investigated for use in contrast-enhanced imaging and functional analyses. This review focuses on contrast agents, particularly in the wavelength range, for use in photoacoustic imaging. The basic principles of photoacoustic imaging regarding light absorption and acoustic release are introduced, and the optical characteristics of tissues are summarized according to the wavelength region. Various types of contrast agents, including organic dyes, semiconducting polymeric nanoparticles, gold nanoparticles, and other inorganic nanoparticles, are explored in terms of their light absorption range in the near-infrared region. An overview of the contrast-enhancing capacity and other functional characteristics of each agent is provided to help researchers gain insights into the development of contrast agents in photoacoustic imaging.
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Affiliation(s)
- Seongyi Han
- Departments of Cogno-Mechatronics Engineering and Optics & Mechatronics Engineering, Pusan National University, Busan 46241, Korea;
| | - Dakyeon Lee
- School of Biomedical Convergence Engineering, Pusan National University, Yangsan 50612, Korea;
- Department of Chemistry, Pohang University of Science and Technology (POSTECH), Pohang 37673, Korea;
| | - Sungjee Kim
- Department of Chemistry, Pohang University of Science and Technology (POSTECH), Pohang 37673, Korea;
| | - Hyung-Hoi Kim
- Department of Laboratory Medicine and Biomedical Research Institute, Pusan National University Hospital, Pusan National University School of Medicine, Busan 49241, Korea
- Correspondence: (H.-H.K.); (S.J.); (J.K.)
| | - Sanghwa Jeong
- School of Biomedical Convergence Engineering, Pusan National University, Yangsan 50612, Korea;
- Correspondence: (H.-H.K.); (S.J.); (J.K.)
| | - Jeesu Kim
- Departments of Cogno-Mechatronics Engineering and Optics & Mechatronics Engineering, Pusan National University, Busan 46241, Korea;
- Correspondence: (H.-H.K.); (S.J.); (J.K.)
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18
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A pilot study of micro-CT-based whole tissue imaging (WTI) on endoscopic submucosal dissection (ESD) specimens. Sci Rep 2022; 12:9889. [PMID: 35701447 PMCID: PMC9198046 DOI: 10.1038/s41598-022-13907-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Accepted: 05/30/2022] [Indexed: 12/25/2022] Open
Abstract
Endoscopic submucosal dissection can remove large superficial gastrointestinal lesions in en bloc. A detailed pathological evaluation of the resected specimen is required to assess the risk of recurrence after treatment. However, the current method of sectioning specimens to a thickness of a few millimeters does not provide information between the sections that are lost during the preparation. In this study, we have produced three-dimensional images of the entire dissected lesion for nine samples by using micro-CT imaging system. Although it was difficult to diagnose histological type on micro-CT images, it successfully evaluates the extent of the lesion and its surgical margins. Micro-CT images can depict sites that cannot be observed by the conventional pathological diagnostic process, suggesting that it may be useful to use in a complementary manner.
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19
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Synchrotron X-ray biosample imaging: opportunities and challenges. Biophys Rev 2022; 14:625-633. [DOI: 10.1007/s12551-022-00964-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Accepted: 05/25/2022] [Indexed: 12/17/2022] Open
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20
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Xian RP, Walsh CL, Verleden SE, Wagner WL, Bellier A, Marussi S, Ackermann M, Jonigk DD, Jacob J, Lee PD, Tafforeau P. A multiscale X-ray phase-contrast tomography dataset of a whole human left lung. Sci Data 2022; 9:264. [PMID: 35654864 PMCID: PMC9163096 DOI: 10.1038/s41597-022-01353-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Accepted: 05/03/2022] [Indexed: 11/09/2022] Open
Abstract
Technological advancements in X-ray imaging using bright and coherent synchrotron sources now allows the decoupling of sample size and resolution while maintaining high sensitivity to the microstructures of soft, partially dehydrated tissues. The continuous developments in multiscale X-ray imaging resulted in hierarchical phase-contrast tomography, a comprehensive approach to address the challenge of organ-scale (up to tens of centimeters) soft tissue imaging with resolution and sensitivity down to the cellular level. Using this technique, we imaged ex vivo an entire human left lung at an isotropic voxel size of 25.08 μm along with local zooms down to 6.05-6.5 μm and 2.45-2.5 μm in voxel size. The high tissue contrast offered by the fourth-generation synchrotron source at the European Synchrotron Radiation Facility reveals the complex multiscale anatomical constitution of the human lung from the macroscopic (centimeter) down to the microscopic (micrometer) scale. The dataset provides comprehensive organ-scale 3D information of the secondary pulmonary lobules and delineates the microstructure of lung nodules with unprecedented detail.
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Affiliation(s)
- R Patrick Xian
- Department of Mechanical Engineering, University College London, London, UK.
| | - Claire L Walsh
- Department of Mechanical Engineering, University College London, London, UK
| | - Stijn E Verleden
- Antwerp Surgical Training, Anatomy and Research Centre (ASTARC), University of Antwerp, Wilrijk, Belgium
| | - Willi L Wagner
- Department of Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
- Translational Lung Research Centre Heidelberg (TLRC), German Lung Research Centre (DZL), Heidelberg, Germany
| | - Alexandre Bellier
- Laboratoire d'Anatomie des Alpes Françaises (LADAF), Université Grenoble Alpes, Grenoble, France
| | - Sebastian Marussi
- Department of Mechanical Engineering, University College London, London, UK
| | - Maximilian Ackermann
- Institute of Pathology and Molecular Pathology, Helios University Clinic Wuppertal, University of Witten/Herdecke, Wuppertal, Germany
- Institute of Functional and Clinical Anatomy, University Medical Center of the Johannes Gutenberg-University Mainz, Mainz, Germany
| | - Danny D Jonigk
- Institute of Pathology, Hannover Medical School, Hannover, Germany
- Biomedical Research in End-stage and Obstructive Lung Disease Hannover (BREATH), German Lung Research Centre (DZL), Hannover, Germany
| | - Joseph Jacob
- Centre for Medical Image Computing, University College London, London, UK
- Department of Radiology, University College London Hospitals NHS Foundation Trust, London, UK
| | - Peter D Lee
- Department of Mechanical Engineering, University College London, London, UK.
| | - Paul Tafforeau
- European Synchrotron Radiation Facility, Grenoble, France.
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21
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Experimental Study and Numerical Analysis of the Tensile Behavior of 3D Woven Ceramic Composites. MACHINES 2022. [DOI: 10.3390/machines10060434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
In this work, the tensile responses of 3D woven quartz fiber silica matrix composites were experimentally and numerically investigated. The ceramic composites reinforced by 3D layer-to-layer angle interlock woven preforms were manufactured and tested under warp direction tension. A numerical method is proposed to model the mechanical response of the ceramic composites under tension. The method is based on a mesoscopic single layer unit cell for the composites, using a progressive damage analysis approach to account for damage evolution. The predicted results are compared with experimental data, and good agreement in the stress–strain response up to the ultimate tensile strength of the composites is obtained. It has been demonstrated that the proposed numerical model based on a simple single layer unit cell is both efficient and effective in characterization of the mechanical behavior of the 3D layer-to-layer woven ceramic composites.
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22
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Experimental Study on the Characterization of Orientation of Polyester Short Fibers in Rubber Composites by an X-ray Three-Dimensional Microscope. MATERIALS 2022; 15:ma15103726. [PMID: 35629752 PMCID: PMC9147132 DOI: 10.3390/ma15103726] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Revised: 05/02/2022] [Accepted: 05/03/2022] [Indexed: 11/17/2022]
Abstract
Polyester-short-fiber-reinforced rubber composites have been detected by an X-ray three-dimensional microscope, and then the three-dimensional reconstruction of the image has been carried out to characterize the orientation of polyester short fibers in the composites for the first time. Based on the summary of three traditional methods and mechanisms of characterizing the orientation of polyester short fibers by the numerical parameter method, the direct test method, and the indirect test method, the method and mechanism of the X-ray three-dimensional microscope applied to the orientation characterization of polyester short fibers have been studied. The combination of the center point and threshold segmentation methods has been used to distinguish which fiber section belongs to the same fiber, and the identification of the whole short fiber in different slice images has been realized for the first time. Moreover, Avizo software has been used to realize the three-dimensional reconstruction of a polyester short fiber scanning image. The obtained data have been integrated and the orientation angle and orientation degree have been quantitatively characterized for the first time. This has filled the key technical problem of quantitative characterization of the orientation angle and orientation degree of polyester fibers. The image has been verified by 3Dmed software, and furthermore, the accuracy of the three-dimensional reconstruction results has been verified.
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23
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von Reumont BM, Anderluh G, Antunes A, Ayvazyan N, Beis D, Caliskan F, Crnković A, Damm M, Dutertre S, Ellgaard L, Gajski G, German H, Halassy B, Hempel BF, Hucho T, Igci N, Ikonomopoulou MP, Karbat I, Klapa MI, Koludarov I, Kool J, Lüddecke T, Ben Mansour R, Vittoria Modica M, Moran Y, Nalbantsoy A, Ibáñez MEP, Panagiotopoulos A, Reuveny E, Céspedes JS, Sombke A, Surm JM, Undheim EAB, Verdes A, Zancolli G. Modern venomics-Current insights, novel methods, and future perspectives in biological and applied animal venom research. Gigascience 2022; 11:giac048. [PMID: 35640874 PMCID: PMC9155608 DOI: 10.1093/gigascience/giac048] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Revised: 04/10/2022] [Accepted: 04/12/2022] [Indexed: 12/11/2022] Open
Abstract
Venoms have evolved >100 times in all major animal groups, and their components, known as toxins, have been fine-tuned over millions of years into highly effective biochemical weapons. There are many outstanding questions on the evolution of toxin arsenals, such as how venom genes originate, how venom contributes to the fitness of venomous species, and which modifications at the genomic, transcriptomic, and protein level drive their evolution. These questions have received particularly little attention outside of snakes, cone snails, spiders, and scorpions. Venom compounds have further become a source of inspiration for translational research using their diverse bioactivities for various applications. We highlight here recent advances and new strategies in modern venomics and discuss how recent technological innovations and multi-omic methods dramatically improve research on venomous animals. The study of genomes and their modifications through CRISPR and knockdown technologies will increase our understanding of how toxins evolve and which functions they have in the different ontogenetic stages during the development of venomous animals. Mass spectrometry imaging combined with spatial transcriptomics, in situ hybridization techniques, and modern computer tomography gives us further insights into the spatial distribution of toxins in the venom system and the function of the venom apparatus. All these evolutionary and biological insights contribute to more efficiently identify venom compounds, which can then be synthesized or produced in adapted expression systems to test their bioactivity. Finally, we critically discuss recent agrochemical, pharmaceutical, therapeutic, and diagnostic (so-called translational) aspects of venoms from which humans benefit.
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Affiliation(s)
- Bjoern M von Reumont
- Goethe University Frankfurt, Institute for Cell Biology and Neuroscience, Department for Applied Bioinformatics, 60438 Frankfurt am Main, Germany
- LOEWE Centre for Translational Biodiversity Genomics, Senckenberg Frankfurt, Senckenberganlage 25, 60235 Frankfurt, Germany
- Justus Liebig University Giessen, Institute for Insectbiotechnology, Heinrich Buff Ring 26-32, 35396 Giessen, Germany
| | - Gregor Anderluh
- Department of Molecular Biology and Nanobiotechnology, National Institute of Chemistry, 1000 Ljubljana, Slovenia
| | - Agostinho Antunes
- CIIMAR/CIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos, s/n, 4450–208 Porto, Portugal
- Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal
| | - Naira Ayvazyan
- Orbeli Institute of Physiology of NAS RA, Orbeli ave. 22, 0028 Yerevan, Armenia
| | - Dimitris Beis
- Developmental Biology, Centre for Clinical, Experimental Surgery and Translational Research, Biomedical Research Foundation Academy of Athens, Athens 11527, Greece
| | - Figen Caliskan
- Department of Biology, Faculty of Science and Letters, Eskisehir Osmangazi University, TR-26040 Eskisehir, Turkey
| | - Ana Crnković
- Department of Molecular Biology and Nanobiotechnology, National Institute of Chemistry, 1000 Ljubljana, Slovenia
| | - Maik Damm
- Technische Universität Berlin, Department of Chemistry, Straße des 17. Juni 135, 10623 Berlin, Germany
| | | | - Lars Ellgaard
- Department of Biology, University of Copenhagen, DK-2200 Copenhagen, Denmark
| | - Goran Gajski
- Institute for Medical Research and Occupational Health, Mutagenesis Unit, Ksaverska cesta 2, 10000 Zagreb, Croatia
| | - Hannah German
- Amsterdam Institute of Molecular and Life Sciences, Division of BioAnalytical Chemistry, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1085, 1081HV Amsterdam, The Netherlands
| | - Beata Halassy
- University of Zagreb, Centre for Research and Knowledge Transfer in Biotechnology, Trg Republike Hrvatske 14, 10000 Zagreb, Croatia
| | - Benjamin-Florian Hempel
- BIH Center for Regenerative Therapies BCRT, Charité - Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - Tim Hucho
- Translational Pain Research, Department of Anesthesiology and Intensive Care Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, 50931 Cologne, Germany
| | - Nasit Igci
- Nevsehir Haci Bektas Veli University, Faculty of Arts and Sciences, Department of Molecular Biology and Genetics, 50300 Nevsehir, Turkey
| | - Maria P Ikonomopoulou
- Madrid Institute for Advanced Studies in Food, Madrid,E28049, Spain
- The University of Queensland, St Lucia, QLD 4072, Australia
| | - Izhar Karbat
- Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Maria I Klapa
- Metabolic Engineering and Systems Biology Laboratory, Institute of Chemical Engineering Sciences, Foundation for Research & Technology Hellas (FORTH/ICE-HT), Patras GR-26504, Greece
| | - Ivan Koludarov
- Justus Liebig University Giessen, Institute for Insectbiotechnology, Heinrich Buff Ring 26-32, 35396 Giessen, Germany
| | - Jeroen Kool
- Amsterdam Institute of Molecular and Life Sciences, Division of BioAnalytical Chemistry, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1085, 1081HV Amsterdam, The Netherlands
| | - Tim Lüddecke
- LOEWE Centre for Translational Biodiversity Genomics, Senckenberg Frankfurt, Senckenberganlage 25, 60235 Frankfurt, Germany
- Department of Bioresources, Fraunhofer Institute for Molecular Biology and Applied Ecology, 35392 Gießen, Germany
| | - Riadh Ben Mansour
- Department of Life Sciences, Faculty of Sciences, Gafsa University, Campus Universitaire Siidi Ahmed Zarrouk, 2112 Gafsa, Tunisia
| | - Maria Vittoria Modica
- Dept. of Biology and Evolution of Marine Organisms (BEOM), Stazione Zoologica Anton Dohrn, Via Po 25c, I-00198 Roma, Italy
| | - Yehu Moran
- Department of Ecology, Evolution and Behavior, Alexander Silberman Institute of Life Sciences, Faculty of Science, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel
| | - Ayse Nalbantsoy
- Department of Bioengineering, Faculty of Engineering, Ege University, 35100 Bornova, Izmir, Turkey
| | - María Eugenia Pachón Ibáñez
- Unit of Infectious Diseases, Microbiology, and Preventive Medicine, Virgen del Rocío University Hospital, Institute of Biomedicine of Seville, 41013 Sevilla, Spain
- CIBER de Enfermedades Infecciosas, Instituto de Salud Carlos III, Madrid, Spain
| | - Alexios Panagiotopoulos
- Metabolic Engineering and Systems Biology Laboratory, Institute of Chemical Engineering Sciences, Foundation for Research & Technology Hellas (FORTH/ICE-HT), Patras GR-26504, Greece
- Animal Biology Division, Department of Biology, University of Patras, Patras, GR-26500, Greece
| | - Eitan Reuveny
- Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Javier Sánchez Céspedes
- Unit of Infectious Diseases, Microbiology, and Preventive Medicine, Virgen del Rocío University Hospital, Institute of Biomedicine of Seville, 41013 Sevilla, Spain
- CIBER de Enfermedades Infecciosas, Instituto de Salud Carlos III, Madrid, Spain
| | - Andy Sombke
- Department of Evolutionary Biology, University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria
| | - Joachim M Surm
- Department of Ecology, Evolution and Behavior, Alexander Silberman Institute of Life Sciences, Faculty of Science, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel
| | - Eivind A B Undheim
- University of Oslo, Centre for Ecological and Evolutionary Synthesis, Postboks 1066 Blindern 0316 Oslo, Norway
| | - Aida Verdes
- Department of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales, José Gutiérrez Abascal 2, 28006 Madrid, Spain
| | - Giulia Zancolli
- Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland
- Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland
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AbdullGaffar B. Quantum Mechanics and Surgical Pathology: A Brief Introduction. Adv Anat Pathol 2022; 29:108-116. [PMID: 34799487 DOI: 10.1097/pap.0000000000000328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Quantum mechanics (QM) and surgical pathology might seem totally unrelated fields of science. Because QM or particle physics explains the very basic structure and function of nature, there are growing interconnections between the fundamentals and applications of QM and biologic sciences. QM is not only applied to the structure of atoms but also probes the structure of biologic molecules, explains their mutational changes and has provided an insight into the basic mechanisms of many different biologic systems. Many of the current applications in biologic sciences, medicine, and surgical pathology rely on the principles of QM. Because surgical pathology uses quantum phenomena such as light and studies disease's alterations that are ultimately governed by quantum changes at nanoscale levels, QM will have potential future implications for the progress of surgical pathology. These might include quantum-enhanced refinements in light, ancillary tools, and interpretation assistance computerized systems. The future of applying the concepts, discoveries, and tools of QM in surgical pathology might create something analogous to quantum biology; that is, quantum pathology or "QuPath."
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Lopez Marquez A, Gareis IE, Dias FJ, Gerhard C, Lezcano MF. Methods to Characterize Electrospun Scaffold Morphology: A Critical Review. Polymers (Basel) 2022; 14:467. [PMID: 35160457 PMCID: PMC8839183 DOI: 10.3390/polym14030467] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/06/2022] [Accepted: 01/19/2022] [Indexed: 12/10/2022] Open
Abstract
Electrospun scaffolds can imitate the hierarchical structures present in the extracellular matrix, representing one of the main concerns of modern tissue engineering. They are characterized in order to evaluate their capability to support cells or to provide guidelines for reproducibility. The issues with widely used methods for morphological characterization are discussed in order to provide insight into a desirable methodology for electrospun scaffold characterization. Reported methods include imaging and physical measurements. Characterization methods harbor inherent limitations and benefits, and these are discussed and presented in a comprehensive selection matrix to provide researchers with the adequate tools and insights required to characterize their electrospun scaffolds. It is shown that imaging methods present the most benefits, with drawbacks being limited to required costs and expertise. By making use of more appropriate characterization, researchers will avoid measurements that do not represent their scaffolds and perhaps might discover that they can extract more characteristics from their scaffold at no further cost.
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Affiliation(s)
- Alex Lopez Marquez
- Faculty of Engineering and Health, University of Applied Sciences and Arts, 37085 Gottingen, Germany; (A.L.M.); (C.G.)
| | - Iván Emilio Gareis
- Laboratorio de Cibernética, Departamento de Bioingeniería, Facultad de Ingeniería, Universidad Nacional de Entre Ríos, Oro Verde 3100, Argentina;
| | - Fernando José Dias
- Research Centre for Dental Sciences CICO, Department of Integral Adults Dentistry, Dental School, Universidad de La Frontera, Temuco 4811230, Chile;
| | - Christoph Gerhard
- Faculty of Engineering and Health, University of Applied Sciences and Arts, 37085 Gottingen, Germany; (A.L.M.); (C.G.)
| | - María Florencia Lezcano
- Laboratorio de Cibernética, Departamento de Bioingeniería, Facultad de Ingeniería, Universidad Nacional de Entre Ríos, Oro Verde 3100, Argentina;
- Research Centre for Dental Sciences CICO, Department of Integral Adults Dentistry, Dental School, Universidad de La Frontera, Temuco 4811230, Chile;
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Tan C, Yu H, Xi Y, Li L, Liao M, Liu F, Duan L. Multi source translation based projection completion for interior region of interest tomography with CBCT. OPTICS EXPRESS 2022; 30:2963-2980. [PMID: 35209426 DOI: 10.1364/oe.442287] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Accepted: 12/29/2021] [Indexed: 06/14/2023]
Abstract
Interior tomography by rotary computed tomography (RCT) is an effective method to improve the detection efficiency and achieve high-resolution imaging for the region of interest (ROI) within a large-scale object. However, because only the X-rays through the ROI can be received by detector, the projection data is inevitably truncated, resulting in truncation artifacts in the reconstructed image. When the ROI is totally within the object, the solution of the problem is not unique, which is named interior problem. Fortunately, projection completion (PC) is an effective technique to solve the interior problem. In this study, we proposed a multi source translation CT based PC method (mSTCT-PC) to cope with the interior problem. Firstly, mSTCT-PC employs multi-source translation to sparsely obtain the global projection which covered the whole object. Secondly, the sparse global projection is utilized to fill up the truncated projection of ROI. The global projection and truncated projection are obtained under the same geometric parameters. Therefore, it omits the registration of projection. To verify the feasibility of this method, simulation and practical experiments were implemented. Compared with the results of ROI reconstructed by filtered back-projection (FBP), simultaneous iterative reconstruction technique-total variation (SIRT-TV) and the multi-resolution based method (mR-PC), the proposed mSTCT-PC is good at mitigating truncation artifacts, preserving details and improving the accuracy of ROI images.
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Ghavami-Lahiji M, Davalloo RT, Tajziehchi G, Shams P. Micro-computed tomography in preventive and restorative dental research: A review. Imaging Sci Dent 2022; 51:341-350. [PMID: 34987994 PMCID: PMC8695474 DOI: 10.5624/isd.20210087] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Revised: 07/04/2021] [Accepted: 07/09/2021] [Indexed: 01/15/2023] Open
Abstract
Purpose The use of micro-computed tomography (micro-CT) scans in biomedical and dental research is growing rapidly. This study aimed to explore the scientific literature on approaches and applications of micro-CT in restorative dentistry. Materials and Methods An electronic search of publications from January 2009 to March 2021 was conducted using ScienceDirect, PubMed, and Google Scholar. The search included only English-language articles. Therefore, only studies that addressed recent advances and the potential uses of micro-CT in restorative and preventive dentistry were selected. Results Micro-CT is a tool that enables 3-dimensional imaging on a small scale with very high resolution. In this method, there is no need for sample preparation or slicing. Therefore, it is possible to examine the internal structure of tissue and the internal adaptation of materials to surfaces without destroying them. Due to these advantages, micro-CT has been recommended as a standard imaging tool in dental research for many applications such as tissue engineering, endodontics, restorative dentistry, and research on the mineral density of hard tissues and bone growth. However, the high costs of micro-CT, the time necessary for scanning and reconstruction, computer expertise requirements, and the enormous volume of information are drawbacks. Conclusion The potential of micro-CT as an emerging, accurate, non-destructive approach is clear, and the valuable research findings reported in the literature provide an impetus for researchers to perform future studies focusing on employing this method in dental research.
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Affiliation(s)
- Mehrsima Ghavami-Lahiji
- Dental Sciences Research Center, School of Dentistry, Guilan University of Medical Sciences, Rasht, Iran.,Department of Restorative Dentistry, School of Dentistry, Guilan University of Medical Sciences, Rasht, Iran
| | - Reza Tayefeh Davalloo
- Department of Restorative Dentistry, School of Dentistry, Guilan University of Medical Sciences, Rasht, Iran
| | - Gelareh Tajziehchi
- Department of Restorative Dentistry, School of Dentistry, Guilan University of Medical Sciences, Rasht, Iran
| | - Paria Shams
- Department of Restorative Dentistry, School of Dentistry, Guilan University of Medical Sciences, Rasht, Iran
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Lee H, Kim J, Kim HH, Kim CS, Kim J. Review on Optical Imaging Techniques for Multispectral Analysis of Nanomaterials. Nanotheranostics 2022; 6:50-61. [PMID: 34976580 PMCID: PMC8671957 DOI: 10.7150/ntno.63222] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Accepted: 07/11/2021] [Indexed: 11/26/2022] Open
Abstract
Biomedical imaging is an essential tool for investigating biological responses in vivo. Among the several imaging techniques, optical imaging systems with multispectral analysis of nanoparticles have been widely investigated due to their ability to distinguish the substances in biological tissues in vivo. This review article focus on multispectral optical imaging techniques that can provide molecular functional information. We summarize the basic principle of the spectral unmixing technique that enables the delineation of optical chromophores. Then, we explore the principle, typical system configuration, and biomedical applications of the representative optical imaging techniques, which are fluorescence imaging, two-photon microscopy, and photoacoustic imaging. The results in the recent studies show the great potential of the multispectral analysis techniques for monitoring responses of biological systems in vivo.
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Affiliation(s)
- Haeni Lee
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Republic of Korea
| | - Jaeheung Kim
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Republic of Korea
| | - Hyung-Hoi Kim
- Department of Laboratory Medicine and Biomedical Research Institute, Pusan National University Hospital and Pusan National University School of Medicine, Busan 49241, Republic of Korea
| | - Chang-Seok Kim
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Republic of Korea
| | - Jeesu Kim
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Republic of Korea
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Li H, Cheng W, Chen B, Pu S, Fan N, Zhang X, Jiao D, Shi D, Guo J, Li Z, Qing Y, Jia B, Zhao HY, Wei HJ. Efficient Generation of P53 Biallelic Mutations in Diannan Miniature Pigs Using RNA-Guided Base Editing. Life (Basel) 2021; 11:life11121417. [PMID: 34947951 PMCID: PMC8706133 DOI: 10.3390/life11121417] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2021] [Revised: 12/09/2021] [Accepted: 12/10/2021] [Indexed: 12/30/2022] Open
Abstract
The base editing 3 (BE3) system, a single-base gene editing technology developed using CRISPR/Cas9n, has a broad range of applications for human disease model construction and gene therapy, as it is highly efficient, accurate, and non-destructive. P53 mutations are present in more than 50% of human malignancies. Due to the similarities between humans and pigs at the molecular level, pig models carrying P53 mutations can be used to research the mechanism of tumorigenesis and improve tumor diagnosis and treatment. According to pathogenic mutations of the human P53 gene at W146* and Q100*, sgRNAs were designed to target exon 4 and exon 5 of the porcine P53 gene. The target editing efficiencies of the two sgRNAs were 61.9% and 50.0%, respectively. The editing efficiency of the BE3 system was highest (about 60%) when C (or G) was at the 5th base. Puromycin screening revealed that 75.0% (21/28) and 68.7% (22/32) of cell colonies contained a P53 mutation at sgRNA-Exon5 and sgRNA-Exon4, respectively. The reconstructed embryos from sgRNA-Exon5-5# were transferred into six recipient gilts, all of which aborted. The reconstructed embryos from sgRNA-Exon4-7# were transferred into 6 recipient gilts, 3 of which became pregnant, resulting in 14 live and 3 dead piglets. Sequencing analyses of the target site confirmed 1 P53 monoallelic mutation and 16 biallelic mutations. The qPCR analysis showed that the P53 mRNA expression level was significantly decreased in different tissues of the P53 mutant piglets (p < 0.05). Additionally, confocal microscopy and western blot analysis revealed an absence of P53 expression in the P53 mutant fibroblasts, livers, and lung tissues. In conclusion, a porcine cancer model with a P53 point mutation can be obtained via the BE3 system and somatic cell nuclear transfer (SCNT).
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Affiliation(s)
- Honghui Li
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China
| | - Wenmin Cheng
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China
| | - Bowei Chen
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- College of Veterinary Medicine, Yunnan Agricultural University, Kunming 650201, China
| | - Shaoxia Pu
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- College of Veterinary Medicine, Yunnan Agricultural University, Kunming 650201, China
| | - Ninglin Fan
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China
| | - Xiaolin Zhang
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China
| | - Deling Jiao
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China
| | - Dejia Shi
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China
| | - Jianxiong Guo
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
| | - Zhuo Li
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming 650201, China
| | - Yubo Qing
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- College of Veterinary Medicine, Yunnan Agricultural University, Kunming 650201, China
| | - Baoyu Jia
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- College of Veterinary Medicine, Yunnan Agricultural University, Kunming 650201, China
| | - Hong-Ye Zhao
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- College of Plant Protection, Yunnan Agricultural University, Kunming 650201, China
- Correspondence: (H.-Y.Z.); (H.-J.W.)
| | - Hong-Jiang Wei
- Yunnan Key Laboratory of Porcine Gene Editing and Xenotransplantation, Kunming 650201, China; (H.L.); (W.C.); (B.C.); (S.P.); (N.F.); (X.Z.); (D.J.); (D.S.); (J.G.); (Z.L.); (Y.Q.); (B.J.)
- College of Veterinary Medicine, Yunnan Agricultural University, Kunming 650201, China
- Correspondence: (H.-Y.Z.); (H.-J.W.)
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Panetta D, Tollapi L, Paolicchi A, Marri E, Aringhieri G, Caramella D. Comparative structural analysis of polyurethane and silicone catheters of totally implantable venous access devices by micro-computed tomography. SAGE Open Med 2021; 9:20503121211059949. [PMID: 34881041 PMCID: PMC8646823 DOI: 10.1177/20503121211059949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Accepted: 10/27/2021] [Indexed: 11/15/2022] Open
Abstract
Objectives: To investigate microstructural alterations of explanted long-term central venous catheters of totally implantable venous access devices, using micro-computed tomography. Methods: A total of 16 catheters (9 made of silicone and 7 made of polyurethane), all non-fractured, have been analyzed in this study. Eight catheters were implanted for an average duration of 994 days (min–max: 98–2731 days), while the remaining eight catheters (four for each material, forming the SIref and PUref control groups) were analyzed before implant and used as a reference. X-ray micro-computed tomography was used to reconstruct the three-dimensional geometry of selected segments of each catheter (ca. 10 cm per sample). Results: Morphometric analysis of the catheters revealed increases wall thickness and section area in the polyurethane group as compared with the reference central venous catheters of the same materials (wall thickness: 403 ± 12 μm in the polyurethane (PU) group vs 382 ± 4 μm in PUref, p = 0.014; wall cross-section area: 2.04 ± 0.09 mm2 in PU vs 1.91 ± 0.03 mm2 in PUref, p = 0.04), whereas implanted silicone catheters showed a larger luminal cross section as compared with their controls (lumen cross-section area = 0.851 ± 0.020 mm2 in silicone (SI) group vs 0.811 ± 0.007 mm2 in SIref, p = 0.007). All analyzed samples in this study presented some type of alteration in the catheter walls, namely, hyperdense spots (below 0.1 mm size), air gaps/bubbles and displacements of inner and outer axes causing heterogeneous wall thickness. The incidence of air gaps showed no difference with respect to both material type and duration of implant, whereas the SI group revealed more hyperdense spots as compared to all other groups. Conclusion: Morphological change and local structural alteration can occur in both silicone and polyurethane catheters. This evidence suggests the need for further studies connecting those morphological changes with modification of mechanical robustness, which ultimately can play a role for patient safety.
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Affiliation(s)
| | - Lara Tollapi
- Anesthesiology and Pain Therapy Unit - Vascular Access Team, University Hospital of Pisa, Pisa, Italy
| | - Adriana Paolicchi
- Anesthesiology and Pain Therapy Unit - Vascular Access Team, University Hospital of Pisa, Pisa, Italy
| | - Elisa Marri
- Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, Pisa, Italy
| | - Giacomo Aringhieri
- Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, Pisa, Italy
| | - Davide Caramella
- Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, Pisa, Italy
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Chen T, Xiao D, Li Y, Shi S, Yang X, Peng S, Guo B, Cai X. Tetrahedral framework nucleic acids regulate osteogenic differentiation potential of osteoporotic adipose-derived stem cells. CHINESE CHEM LETT 2021. [DOI: 10.1016/j.cclet.2021.11.090] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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Bompoti A, Papazoglou AS, Moysidis DV, Otountzidis N, Karagiannidis E, Stalikas N, Panteris E, Ganesh V, Sanctuary T, Arvanitidis C, Sianos G, Michaelson JS, Herrmann MD. Volumetric Imaging of Lung Tissue at Micrometer Resolution: Clinical Applications of Micro-CT for the Diagnosis of Pulmonary Diseases. Diagnostics (Basel) 2021; 11:diagnostics11112075. [PMID: 34829422 PMCID: PMC8625264 DOI: 10.3390/diagnostics11112075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Revised: 11/04/2021] [Accepted: 11/05/2021] [Indexed: 11/16/2022] Open
Abstract
Micro-computed tomography (micro-CT) is a promising novel medical imaging modality that allows for non-destructive volumetric imaging of surgical tissue specimens at high spatial resolution. The aim of this study is to provide a comprehensive assessment of the clinical applications of micro-CT for the tissue-based diagnosis of lung diseases. This scoping review was conducted in accordance with the PRISMA Extension for Scoping Reviews, aiming to include every clinical study reporting on micro-CT imaging of human lung tissues. A literature search yielded 570 candidate articles, out of which 37 were finally included in the review. Of the selected studies, 9 studies explored via micro-CT imaging the morphology and anatomy of normal human lung tissue; 21 studies investigated microanatomic pulmonary alterations due to obstructive or restrictive lung diseases, such as chronic obstructive pulmonary disease, idiopathic pulmonary fibrosis, and cystic fibrosis; and 7 studies examined the utility of micro-CT imaging in assessing lung cancer lesions (n = 4) or in transplantation-related pulmonary alterations (n = 3). The selected studies reported that micro-CT could successfully detect several lung diseases providing three-dimensional images of greater detail and resolution than routine optical slide microscopy, and could additionally provide valuable volumetric insight in both restrictive and obstructive lung diseases. In conclusion, micro-CT-based volumetric measurements and qualitative evaluations of pulmonary tissue structures can be utilized for the clinical management of a variety of lung diseases. With micro-CT devices becoming more accessible, the technology has the potential to establish itself as a core diagnostic imaging modality in pathology and to enable integrated histopathologic and radiologic assessment of lung cancer and other lung diseases.
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Affiliation(s)
- Andreana Bompoti
- Department of Radiology, Peterborough City Hospital, Northwest Anglia NHS Foundation Trust, Peterborough PE3 9GZ, UK;
| | - Andreas S. Papazoglou
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636 Thessaloniki, Greece; (A.S.P.); (D.V.M.); (N.O.); (E.K.); (N.S.); (G.S.)
| | - Dimitrios V. Moysidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636 Thessaloniki, Greece; (A.S.P.); (D.V.M.); (N.O.); (E.K.); (N.S.); (G.S.)
| | - Nikolaos Otountzidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636 Thessaloniki, Greece; (A.S.P.); (D.V.M.); (N.O.); (E.K.); (N.S.); (G.S.)
| | - Efstratios Karagiannidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636 Thessaloniki, Greece; (A.S.P.); (D.V.M.); (N.O.); (E.K.); (N.S.); (G.S.)
| | - Nikolaos Stalikas
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636 Thessaloniki, Greece; (A.S.P.); (D.V.M.); (N.O.); (E.K.); (N.S.); (G.S.)
| | - Eleftherios Panteris
- Biomic_AUTh, Center for Interdisciplinary Research and Innovation (CIRI-AUTH), Balkan Center B1.4, 10th km Thessaloniki-Thermi Rd., P.O. Box 8318, GR 57001 Thessaloniki, Greece;
| | | | - Thomas Sanctuary
- Respiratory Department, Medway NHS Foundation Trust, Kent ME7 5NY, UK;
| | - Christos Arvanitidis
- Hellenic Centre for Marine Research (HCMR), Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), 70013 Heraklion, Greece;
- LifeWatch ERIC, Sector II-II, Plaza de España, 41071 Seville, Spain
| | - Georgios Sianos
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636 Thessaloniki, Greece; (A.S.P.); (D.V.M.); (N.O.); (E.K.); (N.S.); (G.S.)
| | - James S. Michaelson
- Department of Pathology, Massachusetts General Hospital, Boston, MA 02114, USA;
| | - Markus D. Herrmann
- Department of Pathology, Massachusetts General Hospital, Boston, MA 02114, USA;
- Correspondence: ; Tel.: +6-17-724-1896
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Mettivier G, di Franco F, Sarno A, Castriconi R, Di Lillo F, Bliznakova K, Russo P. In-Line Phase Contrast Mammography, Phase Contrast Digital Breast Tomosynthesis, and Phase Contrast Breast Computed Tomography With a Dedicated CT Scanner and a Microfocus X-Ray Tube: Experimental Phantom Study. IEEE TRANSACTIONS ON RADIATION AND PLASMA MEDICAL SCIENCES 2021. [DOI: 10.1109/trpms.2020.3003380] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Kulkarni SA, Kulkarni K, Schacht D, Bhole S, Reiser I, Abe H, Bao J, Bethke K, Hansen N, Jaskowiak N, Khan SA, Tseng J, Chen B, Pincus J, Mueller J, Schulte L, LaBomascus B, Zhang Z, Xia D, Pan X, Wietholt C, Modgil D, Lester D, Lan L, Bohara B, Han X. High-Resolution Full-3D Specimen Imaging for Lumpectomy Margin Assessment in Breast Cancer. Ann Surg Oncol 2021; 28:5513-5524. [PMID: 34333705 PMCID: PMC8325528 DOI: 10.1245/s10434-021-10499-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Accepted: 07/01/2021] [Indexed: 12/16/2022]
Abstract
BACKGROUND Two-dimensional (2D) specimen radiography (SR) and tomosynthesis (DBT) for breast cancer yield data that lack high-depth resolution. A volumetric specimen imager (VSI) was developed to provide full-3D and thin-slice cross-sectional visualization at a 360° view angle. The purpose of this prospective trial was to compare VSI, 2D SR, and DBT interpretation of lumpectomy margin status with the final pathologic margin status of breast lumpectomy specimens. METHODS The study enrolled 200 cases from two institutions. After standard imaging and interpretation was performed, the main lumpectomy specimen was imaged with the VSI device. Image interpretation was performed by three radiologists after surgery based on VSI, 2D SR, and DBT. A receiver operating characteristic (ROC) curve was created for each method. The area under the curve (AUC) was computed to characterize the performance of the imaging method interpreted by each user. RESULTS From 200 lesions, 1200 margins were interpreted. The AUC values of VSI for the three radiologists were respectively 0.91, 0.90, and 0.94, showing relative improvement over the AUCs of 2D SR by 54%, 13%, and 40% and DBT by 32% and 11%, respectively. The VSI has sensitivity ranging from 91 to 94%, specificity ranging from 81 to 85%, a positive predictive value ranging from 25 to 30%, and a negative predicative value of 99%. CONCLUSIONS The ROC curves of the VSI were higher than those of the other specimen imaging methods. Full-3D specimen imaging can improve the correlation between the main lumpectomy specimen margin status and surgical pathology. The findings from this study suggest that using the VSI device for intraoperative margin assessment could further reduce the re-excision rates for women with malignant disease.
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Affiliation(s)
- Swati A Kulkarni
- Division of Breast Surgery, Department of Surgery, Feinberg School of Medicine, Robert H. Lurie Comprehensive Cancer Center, Northwestern University, Chicago, IL, 60611, USA.
| | - Kirti Kulkarni
- Department of Radiology, University of Chicago, Chicago, USA
| | - David Schacht
- Department of Radiology, Northwestern University, Chicago, USA
| | - Sonya Bhole
- Department of Radiology, Northwestern University, Chicago, USA
| | - Ingrid Reiser
- Department of Radiology, University of Chicago, Chicago, USA
| | - Hiroyuki Abe
- Department of Radiology, University of Chicago, Chicago, USA
| | - Jean Bao
- Department of Surgery, University of Chicago, Chicago, USA
| | - Kevin Bethke
- Division of Breast Surgery, Department of Surgery, Feinberg School of Medicine, Robert H. Lurie Comprehensive Cancer Center, Northwestern University, Chicago, IL, 60611, USA
| | - Nora Hansen
- Division of Breast Surgery, Department of Surgery, Feinberg School of Medicine, Robert H. Lurie Comprehensive Cancer Center, Northwestern University, Chicago, IL, 60611, USA
| | - Nora Jaskowiak
- Department of Surgery, University of Chicago, Chicago, USA
| | - Seema A Khan
- Division of Breast Surgery, Department of Surgery, Feinberg School of Medicine, Robert H. Lurie Comprehensive Cancer Center, Northwestern University, Chicago, IL, 60611, USA
| | - Jennifer Tseng
- Department of Surgery, University of Chicago, Chicago, USA
| | - Buxin Chen
- Department of Radiology, University of Chicago, Chicago, USA
| | - Jennifer Pincus
- Department of Pathology, University of Chicago, Chicago, USA
| | - Jeffrey Mueller
- Department of Pathology, University of Chicago, Chicago, USA
| | - Lauren Schulte
- Robert H. Lurie Cancer Center, Northwestern University, Chicago, USA
| | - Bazil LaBomascus
- Robert H. Lurie Cancer Center, Northwestern University, Chicago, USA
| | - Zheng Zhang
- Department of Radiology, University of Chicago, Chicago, USA
| | - Dan Xia
- Department of Radiology, University of Chicago, Chicago, USA
| | - Xiaochuan Pan
- Department of Radiology, University of Chicago, Chicago, USA
| | | | | | | | - Li Lan
- Clarix Imaging Corporation, Chicago, USA
| | | | - Xiao Han
- Clarix Imaging Corporation, Chicago, USA
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Mohammed I, Bernhardt R, Schubert M, Hampel U. Non-invasive morphological characterization of cellular loofa sponges using digital microscopy and micro-CT. INTERNATIONAL JOURNAL OF CHEMICAL REACTOR ENGINEERING 2021. [DOI: 10.1515/ijcre-2020-0167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Loofa sponge is a naturally-grown and decomposable material providing high specific surface area and high porosity for potential application as an environmentally-friendly catalyst carrier. In this work, cellular samples of various loofa types cut from different fiber network regions of the fruits were studied in detail using non-invasive imaging techniques. Digital microscopy was applied to characterize the cellular fiber network, which revealed a honeycomb structure in the core region and a sandwich structure in the wall region. Furthermore, reconstructed three-dimensional (3D) morphological images of the loofa samples obtained via micro-tomography (micro-CT) were utilized to extract the geometrical properties cell size, window diameter and strut thickness as well as porosity and volume-specific surface area. The reconstructed loofa samples revealed porosities of about 92% and specific surface areas up to 2057 m2/m3. In addition, the geometrical properties of manufactured solid foams (ceramic and polyurethane) were also determined via micro-CT and compared with loofa sponge. Finally, the different characteristic cell dimensions were employed to predict the porosity and specific surface area with available geometrical correlations. Deviations between correlation and measurement data (±16%) can be attributed to the peculiarity of the loofa cellular fiber network, which is somewhat different from the tetradecahedral-shaped geometry commonly used as the basis for most of the available correlations.
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Affiliation(s)
- Iman Mohammed
- Chair of Imaging Techniques in Energy and Process Engineering, Technische Universität Dresden , 01062 Dresden , Germany
| | - Ricardo Bernhardt
- Department Mechanics and Composite Materials , Leibniz Institute for Polymer Research Dresden , Hohe Straße 6, 01069 Dresden , Germany
| | - Markus Schubert
- Institute of Fluid Dynamics, Helmholtz-Zentrum Dresden-Rossendorf , Bautzner Landstraße 400, 01328 Dresden , Germany
| | - Uwe Hampel
- Chair of Imaging Techniques in Energy and Process Engineering, Technische Universität Dresden , 01062 Dresden , Germany
- Institute of Fluid Dynamics, Helmholtz-Zentrum Dresden-Rossendorf , Bautzner Landstraße 400, 01328 Dresden , Germany
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Mehrvar S, Mostaghimi S, Camara AKS, Foomani FH, Narayanan J, Fish B, Medhora M, Ranji M. Three-dimensional vascular and metabolic imaging using inverted autofluorescence. JOURNAL OF BIOMEDICAL OPTICS 2021; 26:JBO-210064R. [PMID: 34240589 PMCID: PMC8265174 DOI: 10.1117/1.jbo.26.7.076002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Accepted: 06/15/2021] [Indexed: 05/27/2023]
Abstract
SIGNIFICANCE Three-dimensional (3D) vascular and metabolic imaging (VMI) of whole organs in rodents provides critical and important (patho)physiological information in studying animal models of vascular network. AIM Autofluorescence metabolic imaging has been used to evaluate mitochondrial metabolites such as nicotinamide adenine dinucleotide (NADH) and flavine adenine dinucleotide (FAD). Leveraging these autofluorescence images of whole organs of rodents, we have developed a 3D vascular segmentation technique to delineate the anatomy of the vasculature as well as mitochondrial metabolic distribution. APPROACH By measuring fluorescence from naturally occurring mitochondrial metabolites combined with light-absorbing properties of hemoglobin, we detected the 3D structure of the vascular tree of rodent lungs, kidneys, hearts, and livers using VMI. For lung VMI, an exogenous fluorescent dye was injected into the trachea for inflation and to separate the airways, confirming no overlap between the segmented vessels and airways. RESULTS The kidney vasculature from genetically engineered rats expressing endothelial-specific red fluorescent protein TdTomato confirmed a significant overlap with VMI. This approach abided by the "minimum work" hypothesis of the vascular network fitting to Murray's law. Finally, the vascular segmentation approach confirmed the vascular regression in rats, induced by ionizing radiation. CONCLUSIONS Simultaneous vascular and metabolic information extracted from the VMI provides quantitative diagnostic markers without the confounding effects of vascular stains, fillers, or contrast agents.
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Affiliation(s)
- Shima Mehrvar
- University of Wisconsin–Milwaukee, Biophotonics Laboratory, Department of Electrical Engineering, Milwaukee, Wisconsin, United States
| | - Soudeh Mostaghimi
- University of Wisconsin–Milwaukee, Biophotonics Laboratory, Department of Electrical Engineering, Milwaukee, Wisconsin, United States
| | - Amadou K. S. Camara
- Medical College of Wisconsin, Department of Physiology, Milwaukee, Wisconsin, United States
- Medical College of Wisconsin, Cardiovascular Research Center, Department of Anesthesiology, Milwaukee, Wisconsin, United States
| | - Farnaz H. Foomani
- University of Wisconsin–Milwaukee, Biophotonics Laboratory, Department of Electrical Engineering, Milwaukee, Wisconsin, United States
| | - Jayashree Narayanan
- Medical College of Wisconsin, Department of Physiology, Milwaukee, Wisconsin, United States
- Medical College of Wisconsin, Cardiovascular Research Center, Department of Radiation Oncology, Milwaukee, Wisconsin, United States
| | - Brian Fish
- Medical College of Wisconsin, Department of Physiology, Milwaukee, Wisconsin, United States
- Medical College of Wisconsin, Cardiovascular Research Center, Department of Radiation Oncology, Milwaukee, Wisconsin, United States
| | - Meetha Medhora
- Medical College of Wisconsin, Department of Physiology, Milwaukee, Wisconsin, United States
- Medical College of Wisconsin, Cardiovascular Research Center, Department of Radiation Oncology, Milwaukee, Wisconsin, United States
| | - Mahsa Ranji
- Florida Atlantic University, Department of Computer and Electrical Engineering and Computer Science, Boca Raton, Florida, United States
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Ning L, Zhu N, Smith A, Rajaram A, Hou H, Srinivasan S, Mohabatpour F, He L, Mclnnes A, Serpooshan V, Papagerakis P, Chen X. Noninvasive Three-Dimensional In Situ and In Vivo Characterization of Bioprinted Hydrogel Scaffolds Using the X-ray Propagation-Based Imaging Technique. ACS APPLIED MATERIALS & INTERFACES 2021; 13:25611-25623. [PMID: 34038086 DOI: 10.1021/acsami.1c02297] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Hydrogel-based three-dimensional (3D) bioprinting has been illustrated as promising to fabricate tissue scaffolds for regenerative medicine. Notably, bioprinting of hydrated and soft 3D hydrogel scaffolds with desired structural properties has not been fully achieved so far. Moreover, due to the limitations of current imaging techniques, assessment of bioprinted hydrogel scaffolds is still challenging, yet still essential for scaffold design, fabrication, and longitudinal studies. This paper presents our study on the bioprinting of hydrogel scaffolds and on the development of a novel noninvasive imaging method, based on synchrotron propagation-based imaging with computed tomography (SR-PBI-CT), to study the structural properties of hydrogel scaffolds and their responses to environmental stimuli both in situ and in vivo. Hydrogel scaffolds designed with varying structural patterns were successfully bioprinted through rigorous printing process regulations and then imaged by SR-PBI-CT within physiological environments. Subjective to controllable compressive loadings, the structural responses of scaffolds were visualized and characterized in terms of the structural deformation caused by the compressive loadings. Hydrogel scaffolds were later implanted in rats as nerve conduits for SR-PBI-CT imaging, and the obtained images illustrated their high phase contrast and were further processed for the 3D structure reconstruction and quantitative characterization. Our results show that the scaffold design and printing conditions play important roles in the printed scaffold structure and mechanical properties. More importantly, our obtained images from SR-PBI-CT allow us to visualize the details of hydrogel 3D structures with high imaging resolution. It demonstrates unique capability of this imaging technique for noninvasive, in situ characterization of 3D hydrogel structures pre- and post-implantation in diverse physiological milieus. The established imaging platform can therefore be utilized as a robust, high-precision tool for the design and longitudinal studies of hydrogel scaffold in tissue engineering.
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Affiliation(s)
- Liqun Ning
- Department of Mechanical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
- Department of Biomedical Engineering, Emory University School of Medicine and Georgia Institute of Technology, Atlanta, Georgia 30322, United States
| | - Ning Zhu
- Canadian Light Source, Saskatoon, SK S7N 2V3, Canada
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
- Department of Chemical and Biological Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - An Smith
- Department of Biology, College of Arts and Science, University of Saskatchewan, Saskatoon, SK S7N 5E2, Canada
| | - Ajay Rajaram
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Huishu Hou
- Department of Surgery, Division of Neurosurgery, College of Medicine, University of Saskatchewan, Saskatoon, SK S7N 5E5, Canada
| | - Subashree Srinivasan
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Fatemeh Mohabatpour
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Lihong He
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
- Department of Cell Biology, Medical College of Soochow University, Suzhou 215123, China
| | - Adam Mclnnes
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Vahid Serpooshan
- Department of Biomedical Engineering, Emory University School of Medicine and Georgia Institute of Technology, Atlanta, Georgia 30322, United States
- Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia 30322, United States
- Children's Healthcare of Atlanta, Atlanta, Georgia 30322, United States
| | - Petros Papagerakis
- College of Dentistry, University of Saskatchewan, Saskatoon, SK S7N 5E4, Canada
| | - Xiongbiao Chen
- Department of Mechanical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
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Chen Y, Chen B, Yu T, Yin L, Sun M, He W, Ma C. Photoacoustic Mouse Brain Imaging Using an Optical Fabry-Pérot Interferometric Ultrasound Sensor. Front Neurosci 2021; 15:672788. [PMID: 34079437 PMCID: PMC8165253 DOI: 10.3389/fnins.2021.672788] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Accepted: 04/22/2021] [Indexed: 11/29/2022] Open
Abstract
Photoacoustic (PA, or optoacoustic, OA) mesoscopy is a powerful tool for mouse cerebral imaging, which offers high resolution three-dimensional (3D) images with optical absorption contrast inside the optically turbid brain. The image quality of a PA mesoscope relies on the ultrasonic transducer which detects the PA signals. An all-optical ultrasound sensor based on a Fabry-Pérot (FP) polymer cavity has the following advantages: broadband frequency response, wide angular coverage and small footprint. Here, we present 3D PA mesoscope for mouse brain imaging using such an optical sensor. A heating laser was used to stabilize the sensor's cavity length during the imaging process. To acquire data for a 3D angiogram of the mouse brain, the sensor was mounted on a translation stage and raster scanned. 3D images of the mouse brain vasculature were reconstructed which showed cerebrovascular structure up to a depth of 8 mm with high quality. Imaging segmentation and dual wavelength imaging were performed to demonstrate the potential of the system in preclinical brain research.
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Affiliation(s)
- Yuwen Chen
- Department of Electronic Engineering, Tsinghua University, Beijing, China
| | - Buhua Chen
- Department of Electronic Engineering, Tsinghua University, Beijing, China
| | - Tengfei Yu
- Department of Ultrasound, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Lu Yin
- Department of Ultrasound, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Mingjian Sun
- School of Information Science and Engineering, Harbin Institute of Technology, Weihai, China
- School of Astronautics, Harbin Institute of Technology, Harbin, China
| | - Wen He
- Department of Ultrasound, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Cheng Ma
- Department of Electronic Engineering, Tsinghua University, Beijing, China
- Beijing National Research Center for Information Science and Technology, Beijing, China
- Beijing Innovation Center for Future Chip, Beijing, China
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Papazoglou AS, Karagiannidis E, Moysidis DV, Sofidis G, Bompoti A, Stalikas N, Panteris E, Arvanitidis C, Herrmann MD, Michaelson JS, Sianos G. Current clinical applications and potential perspective of micro-computed tomography in cardiovascular imaging: A systematic scoping review. Hellenic J Cardiol 2021; 62:399-407. [PMID: 33991670 DOI: 10.1016/j.hjc.2021.04.006] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Revised: 03/20/2021] [Accepted: 04/20/2021] [Indexed: 02/06/2023] Open
Abstract
Micro-computed tomography (micro-CT) constitutes an emerging imaging technique, which can be utilized in cardiovascular medicine to study in-detail the microstructure of heart and vessels. This paper aims to systematically review the clinical utility of micro-CT in cardiovascular imaging and propose future applications of micro-CT imaging in cardiovascular research. A systematic scoping review was conducted by searching for original studies written in English according to Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) extension for scoping reviews. Medline, Scopus, ClinicalTrials.gov, and the Cochrane library were systematically searched through December 11, 2020 to identify publications concerning micro-CT applications in cardiovascular imaging. Preclinical-animal studies and case reports were excluded. The Newcastle-Ottawa assessment scale for observational studies was used to evaluate study quality. In total, the search strategy identified 30 studies that report on micro-CT-based cardiovascular imaging and satisfy our eligibility criteria. Across all included studies, the total number of micro-CT scanned specimens was 1,227. Six studies involved postmortem 3D-reconstruction of congenital heart defects, while eleven studies described atherosclerotic vessel (coronary or carotid) characteristics. Thirteen other studies employed micro-CT for the assessment of medical devices (mainly stents or prosthetic valves). In conclusion, micro-CT is a novel imaging modality, effectively adapted for the 3D visualization and analysis of cardiac soft tissues and devices at high spatial resolution. Its increasing use could make significant contributions to our improved understanding of the histopathophysiology of cardiovascular diseases, and, thus, has the potential to optimize interventional procedures and technologies, and ultimately improve patient outcomes.
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Affiliation(s)
- Andreas S Papazoglou
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636, Thessaloniki, Greece
| | - Efstratios Karagiannidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636, Thessaloniki, Greece
| | - Dimitrios V Moysidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636, Thessaloniki, Greece
| | - Georgios Sofidis
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636, Thessaloniki, Greece
| | | | - Nikolaos Stalikas
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636, Thessaloniki, Greece
| | - Eleftherios Panteris
- Biomic_AUTh, Center for Interdisciplinary Research and Innovation (CIRI-AUTH), Balkan Center, B1.4, Thessaloniki, 10th km Thessaloniki-Thermi Rd, P.O. Box 8318, GR 57001, Greece
| | - Christos Arvanitidis
- Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Hellenic Centre for Marine Research (HCMR), Heraklion, Crete, 70013, Greece; LifeWatch ERIC, Sector II-II, Plaza de España, 41071, Seville, Spain
| | - Markus D Herrmann
- Department of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston, USA
| | - James S Michaelson
- Department of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston, USA
| | - Georgios Sianos
- First Department of Cardiology, AHEPA University Hospital, Aristotle University of Thessaloniki, St. Kiriakidi 1, 54636, Thessaloniki, Greece.
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Hayakawa T, Teramoto A, Kiriyama Y, Tsukamoto T, Yamada A, Saito K, Fujita H. Development of Pathological Diagnosis Support System Using Micro-computed Tomography. Acta Histochem Cytochem 2021; 54:49-56. [PMID: 34012176 PMCID: PMC8116619 DOI: 10.1267/ahc.20-00033] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Accepted: 03/03/2021] [Indexed: 11/22/2022] Open
Abstract
In pathological diagnosis, the cutting position of pathological materials is subjectively determined by pathologists. This leads to a low cutting accuracy, which in turn may lead to incorrect diagnoses. In this study, we developed a system that supports the determination of the cutting position by visualizing and analyzing the internal structure of pathological material using micro-computed tomography (CT) before cutting. This system consists of a dedicated micro-CT and cutting support software. The micro-CT system has a fixture for fixing the target, enabling the scanning of easily deformable pathological materials. In the cutting support software, a function that interactively selects the extraction plane while displaying the volume rendering image and outputs a pseudo-histological image was implemented. Our results confirmed that the pseudo-histological image showed the fine structure inside the organ and that the latter image was highly consistent with the pathological image.
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Affiliation(s)
| | | | | | | | - Ayumi Yamada
- Graduate School of Health Sciences, Fujita Health University
| | - Kuniaki Saito
- Graduate School of Health Sciences, Fujita Health University
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Massimi L, Suaris T, Hagen CK, Endrizzi M, Munro PRT, Havariyoun G, Hawker PMS, Smit B, Astolfo A, Larkin OJ, Waltham RM, Shah Z, Duffy SW, Nelan RL, Peel A, Jones JL, Haig IG, Bate D, Olivo A. Detection of involved margins in breast specimens with X-ray phase-contrast computed tomography. Sci Rep 2021; 11:3663. [PMID: 33574584 PMCID: PMC7878478 DOI: 10.1038/s41598-021-83330-w] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Accepted: 02/01/2021] [Indexed: 01/19/2023] Open
Abstract
Margins of wide local excisions in breast conserving surgery are tested through histology, which can delay results by days and lead to second operations. Detection of margin involvement intraoperatively would allow the removal of additional tissue during the same intervention. X-ray phase contrast imaging (XPCI) provides soft tissue sensitivity superior to conventional X-rays: we propose its use to detect margin involvement intraoperatively. We have developed a system that can perform phase-based computed tomography (CT) scans in minutes, used it to image 101 specimens approximately half of which contained neoplastic lesions, and compared results against those of a commercial system. Histological analysis was carried out on all specimens and used as the gold standard. XPCI-CT showed higher sensitivity (83%, 95% CI 69–92%) than conventional specimen imaging (32%, 95% CI 20–49%) for detection of lesions at margin, and comparable specificity (83%, 95% CI 70–92% vs 86%, 95% CI 73–93%). Within the limits of this study, in particular that specimens obtained from surplus tissue typically contain small lesions which makes detection more difficult for both methods, we believe it likely that the observed increase in sensitivity will lead to a comparable reduction in the number of re-operations.
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Affiliation(s)
- Lorenzo Massimi
- Department of Medical Physics and Biomedical Engineering, University College London, Gower St, London, WC1E 6BT, UK
| | - Tamara Suaris
- St Bartholomew's Hospital, Barts Health NHS Trust, West Smithfields, London, EC1A 7BE, UK
| | - Charlotte K Hagen
- Department of Medical Physics and Biomedical Engineering, University College London, Gower St, London, WC1E 6BT, UK
| | - Marco Endrizzi
- Department of Medical Physics and Biomedical Engineering, University College London, Gower St, London, WC1E 6BT, UK
| | - Peter R T Munro
- Department of Medical Physics and Biomedical Engineering, University College London, Gower St, London, WC1E 6BT, UK
| | - Glafkos Havariyoun
- Department of Medical Physics and Biomedical Engineering, University College London, Gower St, London, WC1E 6BT, UK
| | - P M Sam Hawker
- Nikon X-Tek Systems, Tring Business Centre, Icknield Way, Tring, Hertfordshire, HP23 4JX, UK
| | - Bennie Smit
- Nikon X-Tek Systems, Tring Business Centre, Icknield Way, Tring, Hertfordshire, HP23 4JX, UK
| | - Alberto Astolfo
- Nikon X-Tek Systems, Tring Business Centre, Icknield Way, Tring, Hertfordshire, HP23 4JX, UK
| | - Oliver J Larkin
- Nikon X-Tek Systems, Tring Business Centre, Icknield Way, Tring, Hertfordshire, HP23 4JX, UK
| | - Richard M Waltham
- Nikon X-Tek Systems, Tring Business Centre, Icknield Way, Tring, Hertfordshire, HP23 4JX, UK
| | - Zoheb Shah
- Barts and the London School of Medicine and Dentistry, Queen Mary University of London, Newark St, London, E1 2AT, UK
| | - Stephen W Duffy
- Barts and the London School of Medicine and Dentistry, Queen Mary University of London, Newark St, London, E1 2AT, UK
| | - Rachel L Nelan
- Barts and the London School of Medicine and Dentistry, Queen Mary University of London, Newark St, London, E1 2AT, UK
| | - Anthony Peel
- St Bartholomew's Hospital, Barts Health NHS Trust, West Smithfields, London, EC1A 7BE, UK
| | - J Louise Jones
- St Bartholomew's Hospital, Barts Health NHS Trust, West Smithfields, London, EC1A 7BE, UK.,Barts and the London School of Medicine and Dentistry, Queen Mary University of London, Newark St, London, E1 2AT, UK
| | - Ian G Haig
- Nikon X-Tek Systems, Tring Business Centre, Icknield Way, Tring, Hertfordshire, HP23 4JX, UK
| | - David Bate
- Nikon X-Tek Systems, Tring Business Centre, Icknield Way, Tring, Hertfordshire, HP23 4JX, UK
| | - Alessandro Olivo
- Department of Medical Physics and Biomedical Engineering, University College London, Gower St, London, WC1E 6BT, UK.
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43
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Brunet J, Pierrat B, Badel P. Review of Current Advances in the Mechanical Description and Quantification of Aortic Dissection Mechanisms. IEEE Rev Biomed Eng 2021; 14:240-255. [PMID: 31905148 DOI: 10.1109/rbme.2019.2950140] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Aortic dissection is a life-threatening event associated with a very poor outcome. A number of complex phenomena are involved in the initiation and propagation of the disease. Advances in the comprehension of the mechanisms leading to dissection have been made these last decades, thanks to improvements in imaging and experimental techniques. However, the micro-mechanics involved in triggering such rupture events remains poorly described and understood. It constitutes the primary focus of the present review. Towards the goal of detailing the dissection phenomenon, different experimental and modeling methods were used to investigate aortic dissection, and to understand the underlying phenomena involved. In the last ten years, research has tended to focus on the influence of microstructure on initiation and propagation of the dissection, leading to a number of multiscale models being developed. This review brings together all these materials in an attempt to identify main advances and remaining questions.
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44
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Jeong WY, Kang MS, Lee H, Lee JH, Kim J, Han DW, Kim KS. Recent Trends in Photoacoustic Imaging Techniques for 2D Nanomaterial-Based Phototherapy. Biomedicines 2021; 9:80. [PMID: 33467616 PMCID: PMC7830416 DOI: 10.3390/biomedicines9010080] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Revised: 01/13/2021] [Accepted: 01/13/2021] [Indexed: 02/06/2023] Open
Abstract
A variety of 2D materials have been developed for therapeutic biomedical studies. Because of their excellent physicochemical properties, 2D materials can be used as carriers for delivering therapeutic agents into a lesion, leading to phototherapy. Various optical imaging techniques have been used for the monitoring of the treatment process. Among these, photoacoustic imaging has unique advantages including relatively deep imaging depth and large field of view with high spatial resolution. In this review article, we summarize the types of photoacoustic imaging systems used for phototherapy monitoring, then we explore contrast-enhanced photoacoustic images using 2D materials. Finally, photoacoustic image-guided phototherapies are discussed. We conclude that 2D material-based phototherapy can be efficiently monitored by photoacoustic imaging techniques.
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Affiliation(s)
- Woo Yeup Jeong
- School of Chemical Engineering, College of Engineering, Pusan National University, Busan 46241, Korea;
| | - Moon Sung Kang
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Korea; (M.S.K.); (H.L.)
| | - Haeni Lee
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Korea; (M.S.K.); (H.L.)
| | - Jong Hun Lee
- Department of Food Science and Biotechnology, Gachon University, Seongnam, Gyeonggi 13120, Korea;
| | - Jeesu Kim
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Korea; (M.S.K.); (H.L.)
| | - Dong-Wook Han
- Department of Cogno-Mechatronics Engineering, College of Nanoscience & Nanotechnology, Pusan National University, Busan 46241, Korea; (M.S.K.); (H.L.)
| | - Ki Su Kim
- School of Chemical Engineering, College of Engineering, Pusan National University, Busan 46241, Korea;
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45
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Panetta D, Gabelloni M, Faggioni L, Pelosi G, Aringhieri G, Caramella D, Salvadori PA. Cardiac Computed Tomography Perfusion: Contrast Agents, Challenges and Emerging Methodologies from Preclinical Research to the Clinics. Acad Radiol 2021; 28:e1-e13. [PMID: 32220550 DOI: 10.1016/j.acra.2019.12.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Revised: 12/20/2019] [Accepted: 12/24/2019] [Indexed: 12/19/2022]
Abstract
Computed Tomography (CT) has long been regarded as a purely anatomical imaging modality. Recent advances on CT technology and Contrast Agents (CA) in both clinical and preclinical cardiac imaging offer opportunities for the use of CT in functional imaging. Combined with modern ECG-gating techniques, functional CT has now become a reality allowing a comprehensive evaluation of myocardial global and regional function, perfusion and coronary angiography. This article aims at reviewing the current status of cardiac CT perfusion and micro-CT perfusion with established and experimental scanners and contrast agents, from clinical practice to the experimental domain of investigations based on animal models of heart diseases.
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46
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Tkachev SY, Mitrin BI, Karnaukhov NS, Sadyrin EV, Voloshin MV, Maksimov AY, Goncharova AS, Lukbanova EA, Zaikina EV, Volkova AV, Khodakova DV, Mindar MV, Yengibarian MA, Protasova TP, Kit SO, Ermakov AM, Chapek SV, Tkacheva MS. Visualization of different anatomical parts of the enucleated human eye using X-ray micro-CT imaging. Exp Eye Res 2020; 203:108394. [PMID: 33310058 DOI: 10.1016/j.exer.2020.108394] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2020] [Revised: 11/18/2020] [Accepted: 12/07/2020] [Indexed: 12/01/2022]
Abstract
Micro-CT visualization allows reconstruction of eye structures with the resolution of light microscopy and estimation of tissue densities. Moreover, this method excludes damaging procedures and allows further histological staining due to the similar steps in the beginning. We have shown the feasibility of the lab-based micro-CT machine usage for visualization of clinically important compartments of human eye such as trabecular outflow pathway, retina, iris and ciliary body after pre-treatment with iodine in ethanol. We also identified the challenges of applying this contrasting technique to lens, cornea, and retina and proposed alternative staining methods for these tissues. Thereby this work provides a starting point for other studies for imaging of human eyes in normal and pathological conditions using lab-based micro-CT systems.
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Affiliation(s)
- Sergey Y Tkachev
- National Medical Research Centre for Oncology, Rostov-on-Don, Russia.
| | | | | | | | | | - Alexey Y Maksimov
- National Medical Research Centre for Oncology, Rostov-on-Don, Russia
| | - Anna S Goncharova
- National Medical Research Centre for Oncology, Rostov-on-Don, Russia
| | | | | | | | - Darya V Khodakova
- National Medical Research Centre for Oncology, Rostov-on-Don, Russia
| | - Maria V Mindar
- National Medical Research Centre for Oncology, Rostov-on-Don, Russia
| | | | | | - Sergey O Kit
- National Medical Research Centre for Oncology, Rostov-on-Don, Russia
| | | | | | - Marina S Tkacheva
- National Medical Research Centre for Oncology, Rostov-on-Don, Russia
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47
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Fidalgo G, Paiva K, Mendes G, Barcellos R, Colaço G, Sena G, Pickler A, Mota CL, Tromba G, Nogueira LP, Braz D, Silva HR, Colaço MV, Barroso RC. Synchrotron microtomography applied to the volumetric analysis of internal structures of Thoropa miliaris tadpoles. Sci Rep 2020; 10:18934. [PMID: 33144603 PMCID: PMC7641268 DOI: 10.1038/s41598-020-75993-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Accepted: 10/22/2020] [Indexed: 12/12/2022] Open
Abstract
Amphibians are models for studying applied ecological issues such as habitat loss, pollution, disease, and global climate change due to their sensitivity and vulnerability to changes in the environment. Developmental series of amphibians are informative about their biology, and X-ray based 3D reconstruction holds promise for quantifying morphological changes during growth—some with a direct impact on the possibility of an experimental investigation on several of the ecological topics listed above. However, 3D resolution and discrimination of their soft tissues have been difficult with traditional X-ray computed tomography, without time-consuming contrast staining. Tomographic data were initially performed (pre-processing and reconstruction) using the open-source software tool SYRMEP Tomo Project. Data processing and analysis of the reconstructed tomography volumes were conducted using the segmentation semi-automatic settings of the software Avizo Fire 8, which provide information about each investigated tissues, organs or bone elements. Hence, volumetric analyses were carried out to quantify the development of structures in different tadpole developmental stages. Our work shows that synchrotron X-ray microtomography using phase-contrast mode resolves the edges of the internal tissues (as well as overall tadpole morphology), facilitating the segmentation of the investigated tissues. Reconstruction algorithms and segmentation software played an important role in the qualitative and quantitative analysis of each target structure of the Thoropa miliaris tadpole at different stages of development, providing information on volume, shape and length. The use of the synchrotron X-ray microtomography setup of the SYRMEP beamline of Elettra Synchrotron, in phase-contrast mode, allows access to volumetric data for bone formation, eye development, nervous system and notochordal changes during the development (ontogeny) of tadpoles of a cycloramphid frog Thoropa miliaris. As key elements in the normal development of these and any other frog tadpole, the application of such a comparative ontogenetic study, may hold interest to researchers in experimental and environmental disciplines.
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Affiliation(s)
- G Fidalgo
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil.
| | - K Paiva
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - G Mendes
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - R Barcellos
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - G Colaço
- Laboratory of Herpetology, Federal Rural University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - G Sena
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - A Pickler
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - C L Mota
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - G Tromba
- Elettra/Sincrotrone Trieste S.C.P.a., Trieste, Italy
| | - L P Nogueira
- Oral Research Laboratory, Institute of Clinical Dentistry, University of Oslo, Oslo, Norway
| | - D Braz
- Nuclear Engineering Program/COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - H R Silva
- Laboratory of Herpetology, Federal Rural University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - M V Colaço
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - R C Barroso
- Laboratory of Applied Physics to Biomedical Science, State University of Rio de Janeiro, Rio de Janeiro, Brazil
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48
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Sawall S, Beckendorf J, Amato C, Maier J, Backs J, Vande Velde G, Kachelrieß M, Kuntz J. Coronary micro-computed tomography angiography in mice. Sci Rep 2020; 10:16866. [PMID: 33033290 PMCID: PMC7546728 DOI: 10.1038/s41598-020-73735-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Accepted: 09/17/2020] [Indexed: 11/09/2022] Open
Abstract
Coronary computed tomography angiography is an established technique in clinical practice and a valuable tool in the diagnosis of coronary artery disease in humans. Imaging of coronaries in preclinical research, i.e. in small animals, is very difficult due to the high demands on spatial and temporal resolution. Mice exhibit heart rates of up to 600 beats per minute motivating the need for highest detector framerates while the coronaries show diameters below 100 μm indicating the requirement for highest spatial resolution. We herein use a custom built micro-CT equipped with dedicated reconstruction algorithms to illustrate that coronary imaging in mice is possible. The scanner provides a spatial and temporal resolution sufficient for imaging of smallest, moving anatomical structures and the dedicated reconstruction algorithms reduced radiation dose to less than 1 Gy but do not yet allow for longitudinal studies. Imaging studies were performed in ten mice administered with a blood-pool contrast agent. Results show that the course of the left coronary artery can be visualized in all mice and all major branches can be identified for the first time using micro-CT. This reduces the gap in cardiac imaging between clinical practice and preclinical research.
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Affiliation(s)
- Stefan Sawall
- German Cancer Research Center (DKFZ), X-Ray Imaging and CT, Heidelberg, 69120, Germany. .,Medical Faculty, Ruprecht-Karls-University Heidelberg, Heidelberg, 69120, Germany.
| | - Jan Beckendorf
- University Hospital Heidelberg, Molecular Cardiology and Epigenetics (Internal Medicine VIII), Heidelberg, 69120, Germany.,German Centre for Cardiovascular Research (DZHK), Partner Site Heidelberg/Mannheim, Heidelberg, Germany
| | - Carlo Amato
- German Cancer Research Center (DKFZ), X-Ray Imaging and CT, Heidelberg, 69120, Germany.,Medical Faculty, Ruprecht-Karls-University Heidelberg, Heidelberg, 69120, Germany
| | - Joscha Maier
- German Cancer Research Center (DKFZ), X-Ray Imaging and CT, Heidelberg, 69120, Germany.,Department of Physics and Astronomy, Ruprecht-Karls-University Heidelberg, Heidelberg, 69120, Germany
| | - Johannes Backs
- University Hospital Heidelberg, Molecular Cardiology and Epigenetics (Internal Medicine VIII), Heidelberg, 69120, Germany.,German Centre for Cardiovascular Research (DZHK), Partner Site Heidelberg/Mannheim, Heidelberg, Germany
| | - Greetje Vande Velde
- Department of Imaging & Pathology/ MoSAIC, Faculty of Medicine, KU Leuven, Leuven, Belgium
| | - Marc Kachelrieß
- German Cancer Research Center (DKFZ), X-Ray Imaging and CT, Heidelberg, 69120, Germany.,Medical Faculty, Ruprecht-Karls-University Heidelberg, Heidelberg, 69120, Germany
| | - Jan Kuntz
- German Cancer Research Center (DKFZ), X-Ray Imaging and CT, Heidelberg, 69120, Germany.,Medical Faculty, Ruprecht-Karls-University Heidelberg, Heidelberg, 69120, Germany
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49
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Wei Z, Xie W, Zhang X, Zhang Z, Li Y, Xia H, Wang B, Shi Z. Preparation of AlN micro-honeycombs with high permeability via freeze-casting. Ann Ital Chir 2020. [DOI: 10.1016/j.jeurceramsoc.2020.05.010] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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50
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Ondruš J, Hubatka F, Kulich P, Odehnalová N, Harabiš V, Hesko B, Sychra O, Široký P, Turánek J, Novobilský A. A novel approach to imaging engorged ticks: Micro-CT scanning of Ixodes ricinus fed on blood enriched with gold nanoparticles. Ticks Tick Borne Dis 2020; 12:101559. [PMID: 33137638 DOI: 10.1016/j.ttbdis.2020.101559] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Revised: 09/02/2020] [Accepted: 09/07/2020] [Indexed: 11/16/2022]
Abstract
Micro-computed tomography (micro-CT) is an exceptional imaging modality which is limited in visualizing soft biological tissues that need pre-examination contrasting steps, which can cause serious deformation to sizeable specimens like engorged ticks. The aim of this study was to develop a new technique to bypass these limitations and allow the imaging of fed ticks in their natural state. To accomplish this, adult Ixodes ricinus females were allowed to engorge in vitro on blood supplemented with PEGylated gold nanoparticles (PEG-AuNPs). In total, 73/120 females divided into 6 groups engorged on blood enriched with 0.07-2.16 mg PEG-AuNPs per ml of blood. No toxic effect was observed for any of the tested groups compared to the control group, in which 12/20 females engorged on clear blood. The ticks were scanned on a Bruker micro-CT SkyScan 1276. The mean radiodensity of the examined ticks exceeded 0 Hounsfield Units only in the case of the two groups with the highest concentration. The best contrast was observed in ticks engorged on blood with the highest tested concentration of 2.16 mg/mL PEG-AuNPs. In these ticks, the midgut and rectal sac were clearly visible. Also, the midgut lumen volume was computed from segmented image data. The reduction in midgut volume was documented during the egg development process. According to this pilot study, micro-CT of ticks engorged on blood supplemented with contrasting agents in vitro may reveal additional information regarding the engorged ticks' anatomy.
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Affiliation(s)
- Jaroslav Ondruš
- CEITEC - Central European Institute of Technology, University of Veterinary and Pharmaceutical Sciences Brno, Palackého tř. 1946/1, 612 42, Brno, Czech Republic; Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Palackého tř. 1946/1, 612 42, Brno, Czech Republic; Department of Pharmacology and Toxicology, Veterinary Research Institute, Hudcova 296/70, 621 00, Brno, Czech Republic.
| | - František Hubatka
- Department of Pharmacology and Toxicology, Veterinary Research Institute, Hudcova 296/70, 621 00, Brno, Czech Republic
| | - Pavel Kulich
- Department of Pharmacology and Toxicology, Veterinary Research Institute, Hudcova 296/70, 621 00, Brno, Czech Republic
| | - Nikola Odehnalová
- Department of Pharmacology and Toxicology, Veterinary Research Institute, Hudcova 296/70, 621 00, Brno, Czech Republic
| | - Vratislav Harabiš
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, 616 00, Brno, Czech Republic
| | - Branislav Hesko
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, 616 00, Brno, Czech Republic
| | - Oldřich Sychra
- Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Palackého tř. 1946/1, 612 42, Brno, Czech Republic
| | - Pavel Široký
- CEITEC - Central European Institute of Technology, University of Veterinary and Pharmaceutical Sciences Brno, Palackého tř. 1946/1, 612 42, Brno, Czech Republic; Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Palackého tř. 1946/1, 612 42, Brno, Czech Republic
| | - Jaroslav Turánek
- Department of Pharmacology and Toxicology, Veterinary Research Institute, Hudcova 296/70, 621 00, Brno, Czech Republic
| | - Adam Novobilský
- Department of Pharmacology and Toxicology, Veterinary Research Institute, Hudcova 296/70, 621 00, Brno, Czech Republic
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