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For: Sánchez Á, Vila JCC, Chang CY, Diaz-Colunga J, Estrela S, Rebolleda-Gomez M. Directed Evolution of Microbial Communities. Annu Rev Biophys 2021;50:323-341. [PMID: 33646814 PMCID: PMC8105285 DOI: 10.1146/annurev-biophys-101220-072829] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Number Cited by Other Article(s)
1
Jiang X, Peng Z, Zhang J. Starting with screening strains to construct synthetic microbial communities (SynComs) for traditional food fermentation. Food Res Int 2024;190:114557. [PMID: 38945561 DOI: 10.1016/j.foodres.2024.114557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 05/16/2024] [Accepted: 05/26/2024] [Indexed: 07/02/2024]
2
Huang Y, Mukherjee A, Schink S, Benites NC, Basan M. Evolution and stability of complex microbial communities driven by trade-offs. Mol Syst Biol 2024:10.1038/s44320-024-00051-8. [PMID: 38961275 DOI: 10.1038/s44320-024-00051-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Revised: 06/18/2024] [Accepted: 06/20/2024] [Indexed: 07/05/2024]  Open
3
Silverstein MR, Bhatnagar JM, Segrè D. Metabolic complexity drives divergence in microbial communities. Nat Ecol Evol 2024:10.1038/s41559-024-02440-6. [PMID: 38956426 DOI: 10.1038/s41559-024-02440-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 05/14/2024] [Indexed: 07/04/2024]
4
Chen YC, Destouches L, Cook A, Fedorec AJH. Synthetic microbial ecology: engineering habitats for modular consortia. J Appl Microbiol 2024;135:lxae158. [PMID: 38936824 DOI: 10.1093/jambio/lxae158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2024] [Revised: 06/13/2024] [Accepted: 06/26/2024] [Indexed: 06/29/2024]
5
Xiong F, Su Z, Tang Y, Dai T, Wen D. Global WWTP Microbiome-based Integrative Information Platform: From experience to intelligence. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2024;20:100370. [PMID: 38292137 PMCID: PMC10826124 DOI: 10.1016/j.ese.2023.100370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 12/11/2023] [Accepted: 12/12/2023] [Indexed: 02/01/2024]
6
Wang C, Kuzyakov Y. Rhizosphere engineering for soil carbon sequestration. TRENDS IN PLANT SCIENCE 2024;29:447-468. [PMID: 37867041 DOI: 10.1016/j.tplants.2023.09.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Revised: 08/10/2023] [Accepted: 09/30/2023] [Indexed: 10/24/2023]
7
Faller L, Leite MFA, Kuramae EE. Enhancing phosphate-solubilising microbial communities through artificial selection. Nat Commun 2024;15:1649. [PMID: 38388537 PMCID: PMC10884399 DOI: 10.1038/s41467-024-46060-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 02/13/2024] [Indexed: 02/24/2024]  Open
8
Dijamentiuk A, Mangavel C, Gapp C, Elfassy A, Revol-Junelles AM, Borges F. Serial cultures in invert emulsion and monophase systems for microbial community shaping and propagation. Microb Cell Fact 2024;23:50. [PMID: 38355580 PMCID: PMC10865683 DOI: 10.1186/s12934-024-02322-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Accepted: 01/29/2024] [Indexed: 02/16/2024]  Open
9
Thomas JL, Rowland-Chandler J, Shou W. Artificial selection of microbial communities: what have we learnt and how can we improve? Curr Opin Microbiol 2024;77:102400. [PMID: 38091857 DOI: 10.1016/j.mib.2023.102400] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 10/06/2023] [Accepted: 10/19/2023] [Indexed: 02/12/2024]
10
Jing J, Garbeva P, Raaijmakers JM, Medema MH. Strategies for tailoring functional microbial synthetic communities. THE ISME JOURNAL 2024;18:wrae049. [PMID: 38537571 PMCID: PMC11008692 DOI: 10.1093/ismejo/wrae049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 02/26/2024] [Indexed: 04/12/2024]
11
Meyer KM, Muscettola IE, Vasconcelos ALS, Sherman JK, Metcalf CJE, Lindow SE, Koskella B. Conspecific versus heterospecific transmission shapes host specialization of the phyllosphere microbiome. Cell Host Microbe 2023;31:2067-2079.e5. [PMID: 38029741 DOI: 10.1016/j.chom.2023.11.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 09/09/2023] [Accepted: 11/01/2023] [Indexed: 12/01/2023]
12
Arya S, George AB, O’Dwyer JP. Sparsity of higher-order landscape interactions enables learning and prediction for microbiomes. Proc Natl Acad Sci U S A 2023;120:e2307313120. [PMID: 37991947 PMCID: PMC10691334 DOI: 10.1073/pnas.2307313120] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Accepted: 10/16/2023] [Indexed: 11/24/2023]  Open
13
Yu SR, Zhang YY, Zhang QG. The effectiveness of artificial microbial community selection: a conceptual framework and a meta-analysis. Front Microbiol 2023;14:1257935. [PMID: 37840740 PMCID: PMC10570731 DOI: 10.3389/fmicb.2023.1257935] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 09/18/2023] [Indexed: 10/17/2023]  Open
14
Zaccaria M, Sandlin N, Soen Y, Momeni B. Partner-assisted artificial selection of a secondary function for efficient bioremediation. iScience 2023;26:107632. [PMID: 37694149 PMCID: PMC10484969 DOI: 10.1016/j.isci.2023.107632] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Revised: 06/17/2023] [Accepted: 08/11/2023] [Indexed: 09/12/2023]  Open
15
Yu X, Tu Q, Liu J, Peng Y, Wang C, Xiao F, Lian Y, Yang X, Hu R, Yu H, Qian L, Wu D, He Z, Shu L, He Q, Tian Y, Wang F, Wang S, Wu B, Huang Z, He J, Yan Q, He Z. Environmental selection and evolutionary process jointly shape genomic and functional profiles of mangrove rhizosphere microbiomes. MLIFE 2023;2:253-266. [PMID: 38817818 PMCID: PMC10989796 DOI: 10.1002/mlf2.12077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/22/2023] [Revised: 05/21/2023] [Accepted: 06/29/2023] [Indexed: 06/01/2024]
16
Fraboul J, Biroli G, De Monte S. Artificial selection of communities drives the emergence of structured interactions. J Theor Biol 2023;571:111557. [PMID: 37302465 DOI: 10.1016/j.jtbi.2023.111557] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 04/07/2023] [Accepted: 06/05/2023] [Indexed: 06/13/2023]
17
Silverstein M, Bhatnagar JM, Segrè D. Metabolic complexity drives divergence in microbial communities. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.08.03.551516. [PMID: 37577626 PMCID: PMC10418233 DOI: 10.1101/2023.08.03.551516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/15/2023]
18
Letten AD, Ludington WB. Pulsed, continuous or somewhere in between? Resource dynamics matter in the optimisation of microbial communities. THE ISME JOURNAL 2023;17:641-644. [PMID: 36694008 PMCID: PMC10030971 DOI: 10.1038/s41396-023-01369-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2022] [Revised: 01/12/2023] [Accepted: 01/13/2023] [Indexed: 01/26/2023]
19
Moore ER, Carter KR, Heneghan JP, Steadman CR, Nachtsheim AC, Anderson-Cook C, Dickman LT, Newman BD, Dunbar J, Sevanto S, Albright MBN. Microbial Drivers of Plant Performance during Drought Depend upon Community Composition and the Greater Soil Environment. Microbiol Spectr 2023:e0147622. [PMID: 36943043 PMCID: PMC10101012 DOI: 10.1128/spectrum.01476-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2023]  Open
20
Zhu G, Chao H, Sun M, Jiang Y, Ye M. Toxicity sharing model of earthworm intestinal microbiome reveals shared functional genes are more powerful than species in resisting pesticide stress. JOURNAL OF HAZARDOUS MATERIALS 2023;446:130646. [PMID: 36587599 DOI: 10.1016/j.jhazmat.2022.130646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 12/06/2022] [Accepted: 12/19/2022] [Indexed: 06/17/2023]
21
An B, Wang Y, Huang Y, Wang X, Liu Y, Xun D, Church GM, Dai Z, Yi X, Tang TC, Zhong C. Engineered Living Materials For Sustainability. Chem Rev 2023;123:2349-2419. [PMID: 36512650 DOI: 10.1021/acs.chemrev.2c00512] [Citation(s) in RCA: 22] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
22
Sanchez A, Bajic D, Diaz-Colunga J, Skwara A, Vila JCC, Kuehn S. The community-function landscape of microbial consortia. Cell Syst 2023;14:122-134. [PMID: 36796331 DOI: 10.1016/j.cels.2022.12.011] [Citation(s) in RCA: 17] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Revised: 10/17/2022] [Accepted: 12/21/2022] [Indexed: 02/17/2023]
23
Ulmer A, Veit S, Erdemann F, Freund A, Loesch M, Teleki A, Zeidan AA, Takors R. A Two-Compartment Fermentation System to Quantify Strain-Specific Interactions in Microbial Co-Cultures. BIOENGINEERING (BASEL, SWITZERLAND) 2023;10:bioengineering10010103. [PMID: 36671675 PMCID: PMC9854596 DOI: 10.3390/bioengineering10010103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2022] [Revised: 12/19/2022] [Accepted: 12/21/2022] [Indexed: 01/14/2023]
24
Hu H, Wang M, Huang Y, Xu Z, Xu P, Nie Y, Tang H. Guided by the principles of microbiome engineering: Accomplishments and perspectives for environmental use. MLIFE 2022;1:382-398. [PMID: 38818482 PMCID: PMC10989833 DOI: 10.1002/mlf2.12043] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 08/19/2022] [Accepted: 09/02/2022] [Indexed: 06/01/2024]
25
Modification of nitrile hydratase from Rhodococcus erythropolis CCM2595 by semirational design to enhance its substrate affinity. Biointerphases 2022;17:061007. [PMID: 36456206 DOI: 10.1116/6.0002061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]  Open
26
Rawat D, Sharma U, Poria P, Finlan A, Parker B, Sharma RS, Mishra V. Iron-dependent mutualism between Chlorella sorokiniana and Ralstonia pickettii forms the basis for a sustainable bioremediation system. ISME COMMUNICATIONS 2022;2:83. [PMID: 36407791 PMCID: PMC9476460 DOI: 10.1038/s43705-022-00161-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/09/2021] [Revised: 06/15/2022] [Accepted: 07/14/2022] [Indexed: 01/11/2023]
27
Lalejini A, Dolson E, Vostinar AE, Zaman L. Artificial selection methods from evolutionary computing show promise for directed evolution of microbes. eLife 2022;11:79665. [PMID: 35916365 PMCID: PMC9444240 DOI: 10.7554/elife.79665] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Accepted: 08/01/2022] [Indexed: 11/13/2022]  Open
28
Raynaud T, Devers-Lamrani M, Spor A, Blouin M. Community diversity determines the evolution of synthetic bacterial communities under artificial selection. Evolution 2022;76:1883-1895. [PMID: 35789998 DOI: 10.1111/evo.14558] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 05/20/2022] [Accepted: 06/17/2022] [Indexed: 01/22/2023]
29
Jagdish T, Nguyen Ba AN. Microbial experimental evolution in a massively multiplexed and high-throughput era. Curr Opin Genet Dev 2022;75:101943. [PMID: 35752001 DOI: 10.1016/j.gde.2022.101943] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Revised: 05/11/2022] [Accepted: 05/17/2022] [Indexed: 11/25/2022]
30
Mueller UG, Linksvayer TA. Microbiome breeding: conceptual and practical issues. Trends Microbiol 2022;30:997-1011. [PMID: 35595643 DOI: 10.1016/j.tim.2022.04.003] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Revised: 03/30/2022] [Accepted: 04/11/2022] [Indexed: 10/18/2022]
31
Celis AI, Aranda-Díaz A, Culver R, Xue K, Relman D, Shi H, Huang KC. Optimization of the 16S rRNA sequencing analysis pipeline for studying in vitro communities of gut commensals. iScience 2022;25:103907. [PMID: 35340431 PMCID: PMC8941205 DOI: 10.1016/j.isci.2022.103907] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2021] [Revised: 12/24/2021] [Accepted: 02/08/2022] [Indexed: 01/04/2023]  Open
32
Evolutionary dynamics, evolutionary forces, and robustness: A nonequilibrium statistical mechanics perspective. Proc Natl Acad Sci U S A 2022;119:e2112083119. [PMID: 35312370 PMCID: PMC9060472 DOI: 10.1073/pnas.2112083119] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
33
Estrela S, Vila JCC, Lu N, Bajić D, Rebolleda-Gómez M, Chang CY, Goldford JE, Sanchez-Gorostiaga A, Sánchez Á. Functional attractors in microbial community assembly. Cell Syst 2022;13:29-42.e7. [PMID: 34653368 PMCID: PMC8800145 DOI: 10.1016/j.cels.2021.09.011] [Citation(s) in RCA: 44] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2020] [Revised: 06/02/2021] [Accepted: 09/21/2021] [Indexed: 01/21/2023]
34
Artificial Selection on Microbiomes To Breed Microbiomes That Confer Salt Tolerance to Plants. mSystems 2021;6:e0112521. [PMID: 34846165 PMCID: PMC8631316 DOI: 10.1128/msystems.01125-21] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
35
Chai M, Deng C, Chen Q, Lu W, Liu Y, Li J, Du G, Lv X, Liu L. Synthetic Biology Toolkits and Metabolic Engineering Applied in Corynebacterium glutamicum for Biomanufacturing. ACS Synth Biol 2021;10:3237-3250. [PMID: 34855356 DOI: 10.1021/acssynbio.1c00355] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
36
Asad NI, Tremblay J, Dozois J, Mukula E, L'Espérance E, Constant P, Yergeau E. Predictive microbial-based modelling of wheat yields and grain baking quality across a 500km transect in Québec. FEMS Microbiol Ecol 2021;97:6458360. [PMID: 34888659 DOI: 10.1093/femsec/fiab160] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Accepted: 12/07/2021] [Indexed: 11/14/2022]  Open
37
Jacquiod S, Spor A, Wei S, Munkager V, Bru D, Sørensen SJ, Salon C, Philippot L, Blouin M. Artificial selection of stable rhizosphere microbiota leads to heritable plant phenotype changes. Ecol Lett 2021;25:189-201. [PMID: 34749426 DOI: 10.1111/ele.13916] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Revised: 09/07/2021] [Accepted: 09/27/2021] [Indexed: 11/29/2022]
38
Altieri A, Roy F, Cammarota C, Biroli G. Properties of Equilibria and Glassy Phases of the Random Lotka-Volterra Model with Demographic Noise. PHYSICAL REVIEW LETTERS 2021;126:258301. [PMID: 34241496 DOI: 10.1103/physrevlett.126.258301] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Revised: 02/06/2021] [Accepted: 05/17/2021] [Indexed: 06/13/2023]
39
Azimzade Y, Saberi AA. Geometrically regulating evolutionary dynamics in biofilms. Phys Rev E 2021;103:L050401. [PMID: 34134254 DOI: 10.1103/physreve.103.l050401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Accepted: 04/21/2021] [Indexed: 11/07/2022]
40
Bergelson J, Kreitman M, Petrov DA, Sanchez A, Tikhonov M. Functional biology in its natural context: A search for emergent simplicity. eLife 2021;10:e67646. [PMID: 34096867 PMCID: PMC8184206 DOI: 10.7554/elife.67646] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Accepted: 05/28/2021] [Indexed: 01/03/2023]  Open
41
Estrela S, Sánchez Á, Rebolleda-Gómez M. Multi-Replicated Enrichment Communities as a Model System in Microbial Ecology. Front Microbiol 2021;12:657467. [PMID: 33897672 PMCID: PMC8062719 DOI: 10.3389/fmicb.2021.657467] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Accepted: 03/15/2021] [Indexed: 12/21/2022]  Open
42
Borchert E, Hammerschmidt K, Hentschel U, Deines P. Enhancing Microbial Pollutant Degradation by Integrating Eco-Evolutionary Principles with Environmental Biotechnology. Trends Microbiol 2021;29:908-918. [PMID: 33812769 DOI: 10.1016/j.tim.2021.03.002] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Revised: 03/05/2021] [Accepted: 03/08/2021] [Indexed: 12/12/2022]
43
Directed Evolution of a Glutathione Transferase for the Development of a Biosensor for Alachlor Determination. Symmetry (Basel) 2021. [DOI: 10.3390/sym13030461] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
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