1
|
Brehm N, Wenke N, Glessner K, Haehnel-Taguchi M. Physiological responses of mechanosensory systems in the head of larval zebrafish ( Danio rerio). Front Robot AI 2023; 10:1212626. [PMID: 37583713 PMCID: PMC10423815 DOI: 10.3389/frobt.2023.1212626] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 07/11/2023] [Indexed: 08/17/2023] Open
Abstract
The lateral line system of zebrafish consists of the anterior lateral line, with neuromasts distributed on the head, and the posterior lateral line, with neuromasts distributed on the trunk. The sensory afferent neurons are contained in the anterior and posterior lateral line ganglia, respectively. So far, the vast majority of physiological and developmental studies have focused on the posterior lateral line. However, studies that focus on the anterior lateral line, especially on its physiology, are very rare. The anterior lateral line involves different neuromast patterning processes, specific distribution of synapses, and a unique role in behavior. Here, we report our observations regarding the development of the lateral line and analyze the physiological responses of the anterior lateral line to mechanical and water jet stimuli. Sensing in the fish head may be crucial to avoid obstacles, catch prey, and orient in water current, especially in the absence of visual cues. Alongside the lateral line, the trigeminal system, with its fine nerve endings innervating the skin, could contribute to perceiving mechanosensory stimulation. Therefore, we compare the physiological responses of the lateral line afferent neurons to responses of trigeminal neurons and responsiveness of auditory neurons. We show that anterior lateral line neurons are tuned to the velocity of mechanosensory ramp stimulation, while trigeminal neurons either only respond to mechanical step stimuli or fast ramp and step stimuli. Auditory neurons did not respond to mechanical or water jet stimuli. These results may prove to be essential in designing underwater robots and artificial lateral lines, with respect to the spectra of stimuli that the different mechanosensory systems in the larval head are tuned to, and underline the importance and functionality of the anterior lateral line system in the larval fish head.
Collapse
Affiliation(s)
- Nils Brehm
- Department of Developmental Biology, Institute for Biology 1, University of Freiburg, Freiburg, Germany
| | | | | | - Melanie Haehnel-Taguchi
- Department of Developmental Biology, Institute for Biology 1, University of Freiburg, Freiburg, Germany
| |
Collapse
|
2
|
Lunsford ET, Paz A, Keene AC, Liao JC. Evolutionary convergence of a neural mechanism in the cavefish lateral line system. eLife 2022; 11:77387. [PMID: 35708234 PMCID: PMC9246366 DOI: 10.7554/elife.77387] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 06/15/2022] [Indexed: 11/13/2022] Open
Abstract
Animals can evolve dramatic sensory functions in response to environmental constraints, but little is known about the neural mechanisms underlying these changes. The Mexican tetra, Astyanax mexicanus, is a leading model to study genetic, behavioral, and physiological evolution by comparing eyed surface populations and blind cave populations. We compared neurophysiological responses of posterior lateral line afferent neurons and motor neurons across A. mexicanus populations to reveal how shifts in sensory function may shape behavioral diversity. These studies indicate differences in intrinsic afferent signaling and gain control across populations. Elevated endogenous afferent activity identified a lower response threshold in the lateral line of blind cavefish relative to surface fish leading to increased evoked potentials during hair cell deflection in cavefish. We next measured the effect of inhibitory corollary discharges from hindbrain efferent neurons onto afferents during locomotion. We discovered that three independently derived cavefish populations have evolved persistent afferent activity during locomotion, suggesting for the first time that partial loss of function in the efferent system can be an evolutionary mechanism for neural adaptation of a vertebrate sensory system.
Collapse
Affiliation(s)
- Elias T Lunsford
- Department of Biology, University of Florida, Saint Augustine, United States
| | - Alexandra Paz
- Department of Biological Sciences, Florida Atlantic University, Jupiter, United States
| | - Alex C Keene
- Texas A&M University, College Station, United States
| | - James C Liao
- Department of Biology, University of Florida, Saint Augustine, United States
| |
Collapse
|
3
|
Holmgren M, Ravicz ME, Hancock KE, Strelkova O, Kallogjeri D, Indzhykulian AA, Warchol ME, Sheets L. Mechanical overstimulation causes acute injury and synapse loss followed by fast recovery in lateral-line neuromasts of larval zebrafish. eLife 2021; 10:69264. [PMID: 34665127 PMCID: PMC8555980 DOI: 10.7554/elife.69264] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Accepted: 10/18/2021] [Indexed: 12/14/2022] Open
Abstract
Excess noise damages sensory hair cells, resulting in loss of synaptic connections with auditory nerves and, in some cases, hair-cell death. The cellular mechanisms underlying mechanically induced hair-cell damage and subsequent repair are not completely understood. Hair cells in neuromasts of larval zebrafish are structurally and functionally comparable to mammalian hair cells but undergo robust regeneration following ototoxic damage. We therefore developed a model for mechanically induced hair-cell damage in this highly tractable system. Free swimming larvae exposed to strong water wave stimulus for 2 hr displayed mechanical injury to neuromasts, including afferent neurite retraction, damaged hair bundles, and reduced mechanotransduction. Synapse loss was observed in apparently intact exposed neuromasts, and this loss was exacerbated by inhibiting glutamate uptake. Mechanical damage also elicited an inflammatory response and macrophage recruitment. Remarkably, neuromast hair-cell morphology and mechanotransduction recovered within hours following exposure, suggesting severely damaged neuromasts undergo repair. Our results indicate functional changes and synapse loss in mechanically damaged lateral-line neuromasts that share key features of damage observed in noise-exposed mammalian ear. Yet, unlike the mammalian ear, mechanical damage to neuromasts is rapidly reversible.
Collapse
Affiliation(s)
- Melanie Holmgren
- Department of Otolaryngology, Washington University School of Medicine, St Louis, United States
| | - Michael E Ravicz
- Eaton-Peabody Laboratory, Massachusetts Eye and Ear, Boston, United States.,Department of Otolaryngology-Head and Neck Surgery, Harvard Medical School, Boston, United States
| | - Kenneth E Hancock
- Eaton-Peabody Laboratory, Massachusetts Eye and Ear, Boston, United States.,Department of Otolaryngology-Head and Neck Surgery, Harvard Medical School, Boston, United States
| | - Olga Strelkova
- Eaton-Peabody Laboratory, Massachusetts Eye and Ear, Boston, United States.,Department of Otolaryngology-Head and Neck Surgery, Harvard Medical School, Boston, United States
| | - Dorina Kallogjeri
- Department of Otolaryngology, Washington University School of Medicine, St Louis, United States
| | - Artur A Indzhykulian
- Eaton-Peabody Laboratory, Massachusetts Eye and Ear, Boston, United States.,Department of Otolaryngology-Head and Neck Surgery, Harvard Medical School, Boston, United States
| | - Mark E Warchol
- Department of Otolaryngology, Washington University School of Medicine, St Louis, United States.,Department of Neuroscience, Washington University School of Medicine, St Louis, United States
| | - Lavinia Sheets
- Department of Otolaryngology, Washington University School of Medicine, St Louis, United States.,Department of Developmental Biology, Washington University School of Medicine, St. Louis, United States
| |
Collapse
|
4
|
Skandalis DA, Lunsford ET, Liao JC. Corollary discharge enables proprioception from lateral line sensory feedback. PLoS Biol 2021; 19:e3001420. [PMID: 34634044 PMCID: PMC8530527 DOI: 10.1371/journal.pbio.3001420] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2021] [Revised: 10/21/2021] [Accepted: 09/21/2021] [Indexed: 11/26/2022] Open
Abstract
Animals modulate sensory processing in concert with motor actions. Parallel copies of motor signals, called corollary discharge (CD), prepare the nervous system to process the mixture of externally and self-generated (reafferent) feedback that arises during locomotion. Commonly, CD in the peripheral nervous system cancels reafference to protect sensors and the central nervous system from being fatigued and overwhelmed by self-generated feedback. However, cancellation also limits the feedback that contributes to an animal's awareness of its body position and motion within the environment, the sense of proprioception. We propose that, rather than cancellation, CD to the fish lateral line organ restructures reafference to maximize proprioceptive information content. Fishes' undulatory body motions induce reafferent feedback that can encode the body's instantaneous configuration with respect to fluid flows. We combined experimental and computational analyses of swimming biomechanics and hair cell physiology to develop a neuromechanical model of how fish can track peak body curvature, a key signature of axial undulatory locomotion. Without CD, this computation would be challenged by sensory adaptation, typified by decaying sensitivity and phase distortions with respect to an input stimulus. We find that CD interacts synergistically with sensor polarization to sharpen sensitivity along sensors' preferred axes. The sharpening of sensitivity regulates spiking to a narrow interval coinciding with peak reafferent stimulation, which prevents adaptation and homogenizes the otherwise variable sensor output. Our integrative model reveals a vital role of CD for ensuring precise proprioceptive feedback during undulatory locomotion, which we term external proprioception.
Collapse
Affiliation(s)
- Dimitri A. Skandalis
- Department of Biology & Whitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, Florida, United States of America
- Department of Psychological & Brain Sciences, Johns Hopkins University, Baltimore, Maryland, United States of America
| | - Elias T. Lunsford
- Department of Biology & Whitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, Florida, United States of America
| | - James C. Liao
- Department of Biology & Whitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, Florida, United States of America
| |
Collapse
|
5
|
Hardy K, Amariutei AE, De Faveri F, Hendry A, Marcotti W, Ceriani F. Functional development and regeneration of hair cells in the zebrafish lateral line. J Physiol 2021; 599:3913-3936. [PMID: 34143497 PMCID: PMC7612129 DOI: 10.1113/jp281522] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Accepted: 06/03/2021] [Indexed: 12/22/2022] Open
Abstract
Hair cells are mechanosensory receptors responsible for transducing auditory and vestibular information into electrical signals, which are then transmitted with remarkable precision to afferent neurons. Different from mammals, the hair cells of lower vertebrates, including those present in the neuromasts of the zebrafish lateral line, regenerate following environmental or chemical insults. Here we investigate the time-course of regeneration of hair cells in vivo using electrophysiology, 2-photon imaging and immunostaining applied to wild-type and genetically-encoded fluorescent indicator zebrafish lines. Functional hair cells drive spontaneous action potentials in the posterior lateral line afferent fibres, the frequency of which progressively increases over the first 10-days post-fertilization (dpf). Higher firing-rate fibres are only observed from ~6 dpf. Following copper treatment, newly formed hair cells become functional and are able to drive APs in the afferent fibres within 48 hours in both early-larval (≤8 dpf) and late-larval (12-17 dpf) zebrafish. However, the complete functional regeneration of the entire neuromast is delayed in late-larval compared to early-larval zebrafish. We propose that while individual regenerating hair cells can rapidly become active, the acquisition of fully functional neuromasts progresses faster at early-larval stages, a time when hair cells are still under development. At both ages, the afferent terminals in the regenerating neuromast appear to make initial contact with supporting cells. The ablation of the lateral line afferent neurons prevents the timely regeneration of supporting cells and hair cells. These findings indicate that the afferent system is likely to facilitate or promote the neuromast regeneration process.
Collapse
Affiliation(s)
- Katherine Hardy
- Department of Biomedical Science, University of Sheffield, Sheffield, UK
| | - Ana E Amariutei
- Department of Biomedical Science, University of Sheffield, Sheffield, UK
| | | | - Aenea Hendry
- Department of Biomedical Science, University of Sheffield, Sheffield, UK
| | - Walter Marcotti
- Department of Biomedical Science, University of Sheffield, Sheffield, UK.,Sheffield Neuroscience Institute, University of Sheffield, Sheffield, UK
| | - Federico Ceriani
- Department of Biomedical Science, University of Sheffield, Sheffield, UK
| |
Collapse
|
6
|
De Faveri F, Marcotti W, Ceriani F. Sensory adaptation at ribbon synapses in the zebrafish lateral line. J Physiol 2021; 599:3677-3696. [PMID: 34047358 PMCID: PMC7612133 DOI: 10.1113/jp281646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Accepted: 05/20/2021] [Indexed: 11/22/2022] Open
Abstract
Adaptation is used by sensory systems to adjust continuously their sensitivity to match changes in environmental stimuli. In the auditory and vestibular systems, the release properties of glutamate-containing vesicles at the hair-cell ribbon synapses play a crucial role in sensory adaptation, thus shaping the neural response to sustained stimulation. How ribbon synapses regulate the release of glutamate and how they modulate afferent responses in vivo is still largely unknown. Here, we have used two-photon imaging and electrophysiology to investigate the synaptic transfer characteristics of the hair cells in the context of sensory adaptation in live zebrafish. Prolonged and repeated water-jet stimulation of the hair-cell stereociliary bundles caused adaptation of the action potential firing rate elicited in the afferent neurons. By monitoring glutamate at ribbon synapses using time-lapse imaging, we identified two kinetically distinct release components: a rapid response that was exhausted within 50-100 ms and a slower and sustained response lasting the entire stimulation. After repeated stimulations, the recovery of the fast component followed a biphasic time course. Depression of glutamate release was largely responsible for the rapid firing rate adaptation recorded in the afferent neurons. However, postsynaptic Ca2+ responses had a slower recovery time course than that of glutamate release, indicating that they are also likely to contribute to the afferent firing adaptation. Hair cells also exhibited a form of adaptation during inhibitory bundle stimulations. We conclude that hair cells have optimised their synaptic machinery to encode prolonged stimuli and to maintain their sensitivity to new incoming stimuli.
Collapse
Affiliation(s)
| | - Walter Marcotti
- Department of Biomedical Science, University of Sheffield, Sheffield, UK.,Neuroscience Institute, University of Sheffield, Sheffield, UK
| | - Federico Ceriani
- Department of Biomedical Science, University of Sheffield, Sheffield, UK
| |
Collapse
|
7
|
Poulsen RE, Scholz LA, Constantin L, Favre-Bulle I, Vanwalleghem GC, Scott EK. Broad frequency sensitivity and complex neural coding in the larval zebrafish auditory system. Curr Biol 2021; 31:1977-1987.e4. [PMID: 33657408 PMCID: PMC8443405 DOI: 10.1016/j.cub.2021.01.103] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2020] [Revised: 12/16/2020] [Accepted: 01/28/2021] [Indexed: 02/02/2023]
Abstract
Most animals have complex auditory systems that identify salient features of the acoustic landscape to direct appropriate responses. In fish, these features include the volume, frequency, complexity, and temporal structure of acoustic stimuli transmitted through water. Larval fish have simple brains compared to adults but swim freely and depend on sophisticated sensory processing for survival.1-5 Zebrafish larvae, an important model for studying brain-wide neural networks, have thus far been found to possess a rudimentary auditory system, sensitive to a narrow range of frequencies and without evident sensitivity to acoustic features that are salient and ethologically important to adult fish.6,7 Here, we have combined a novel method for delivering water-borne sounds, a diverse assembly of acoustic stimuli, and whole-brain calcium imaging to describe the responses of individual auditory-responsive neurons across the brains of zebrafish larvae. Our results reveal responses to frequencies ranging from 100 Hz to 4 kHz, with evidence of frequency discrimination from 100 Hz to 2.5 kHz. Frequency-selective neurons are located in numerous regions of the brain, and neurons responsive to the same frequency are spatially grouped in some regions. Using functional clustering, we identified categories of neurons that are selective for a single pure-tone frequency, white noise, the sharp onset of acoustic stimuli, and stimuli involving a gradual crescendo. These results suggest a more nuanced auditory system than has previously been described in larval fish and provide insights into how a young animal's auditory system can both function acutely and serve as the scaffold for a more complex adult system.
Collapse
Affiliation(s)
- Rebecca E Poulsen
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Leandro A Scholz
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Lena Constantin
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Itia Favre-Bulle
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia; School of Mathematics and Physics, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Gilles C Vanwalleghem
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
| | - Ethan K Scott
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
| |
Collapse
|
8
|
Lunsford ET, Skandalis DA, Liao JC. Efferent modulation of spontaneous lateral line activity during and after zebrafish motor commands. J Neurophysiol 2019; 122:2438-2448. [PMID: 31642405 PMCID: PMC6966311 DOI: 10.1152/jn.00594.2019] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 10/18/2019] [Accepted: 10/18/2019] [Indexed: 01/27/2023] Open
Abstract
Accurate sensory processing during movement requires the animal to distinguish between external (exafferent) and self-generated (reafferent) stimuli to maintain sensitivity to biologically relevant cues. The lateral line system in fishes is a mechanosensory organ that experiences reafferent sensory feedback, via detection of fluid motion relative to the body generated during behaviors such as swimming. For the first time in larval zebrafish (Danio rerio), we employed simultaneous recordings of lateral line and motor activity to reveal the activity of afferent neurons arising from endogenous feedback from hindbrain efferent neurons during locomotion. Frequency of spontaneous spiking in posterior lateral line afferent neurons decreased during motor activity and was absent for more than half of swimming trials. Targeted photoablation of efferent neurons abolished the afferent inhibition that was correlated to swimming, indicating that inhibitory efferent neurons are necessary for modulating lateral line sensitivity during locomotion. We monitored calcium activity with Tg(elav13:GCaMP6s) fish and found synchronous activity between putative cholinergic efferent neurons and motor neurons. We examined correlates of motor activity to determine which may best predict the attenuation of afferent activity and therefore what components of the motor signal are translated through the corollary discharge. Swim duration was most strongly correlated to the change in afferent spike frequency. Attenuated spike frequency persisted past the end of the fictive swim bout, suggesting that corollary discharge also affects the glide phase of burst and glide locomotion. The duration of the glide in which spike frequency was attenuated increased with swim duration but decreased with motor frequency. Our results detail a neuromodulatory mechanism in larval zebrafish that adaptively filters self-generated flow stimuli during both the active and passive phases of locomotion.NEW & NOTEWORTHY For the first time in vivo, we quantify the endogenous effect of efferent activity on afferent gain control in a vertebrate hair cell system during and after locomotion. We believe that this pervasive effect has been underestimated when afferent activity of octavolateralis systems is characterized in the current literature. We further identify a refractory period out of phase with efferent control and place this gain mechanism in the context of gliding behavior of freely moving animals.
Collapse
Affiliation(s)
- Elias T Lunsford
- The Whitney Laboratory for Marine Bioscience, Department of Biology, University of Florida, Saint Augustine, Florida
| | - Dimitri A Skandalis
- The Whitney Laboratory for Marine Bioscience, Department of Biology, University of Florida, Saint Augustine, Florida
| | - James C Liao
- The Whitney Laboratory for Marine Bioscience, Department of Biology, University of Florida, Saint Augustine, Florida
| |
Collapse
|
9
|
Qu G, Fan B, Fu X, Yu Y. The Impact of Frequency Scale on the Response Sensitivity and Reliability of Cortical Neurons to 1/f β Input Signals. Front Cell Neurosci 2019; 13:311. [PMID: 31354432 PMCID: PMC6637762 DOI: 10.3389/fncel.2019.00311] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Accepted: 06/25/2019] [Indexed: 12/16/2022] Open
Abstract
What type of principle features intrinsic inside of the fluctuated input signals could drive neurons with the maximal excitations is one of the crucial neural coding issues. In this article, we examined both experimentally and theoretically the cortical neuronal responsivity (including firing rate and spike timing reliability) to input signals with different intrinsic correlational statistics (e.g., white-type noise, showed 1/f0 power spectrum, pink noise 1/f, and brown noises 1/f2) and different frequency ranges. Our results revealed that the response sensitivity and reliability of cortical neurons is much higher in response to 1/f noise stimuli with long-term correlations than 1/f0 with short-term correlations for a broad frequency range, and also higher than 1/f2 for all frequency ranges. In addition, we found that neuronal sensitivity diverges to opposite directions for 1/f noise comparing with 1/f0 white noise as a function of cutoff frequency of input signal. As the cutoff frequency is progressively increased from 50 to 1,000 Hz, the neuronal responsiveness increased gradually for 1/f noise, while decreased exponentially for white noise. Computational simulations of a general cortical model revealed that, neuronal sensitivity and reliability to input signal statistics was majorly dominated by fast sodium inactivation, potassium activation, and membrane time constants.
Collapse
Affiliation(s)
| | | | | | - Yuguo Yu
- State Key Laboratory of Medical Neurobiology, School of Life Science, Human Phenome Institute, Institute of Brain Science, Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai, China
| |
Collapse
|
10
|
Haehnel-Taguchi M, Akanyeti O, Liao JC. Behavior, Electrophysiology, and Robotics Experiments to Study Lateral Line Sensing in Fishes. Integr Comp Biol 2018; 58:874-883. [PMID: 29982706 PMCID: PMC6204992 DOI: 10.1093/icb/icy066] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
The lateral line system is a sensory system unique to fishes and amphibians. It is composed of distributed mechanosensory hair cell organs on the head and body (neuromasts), which are sensitive to pressure gradients and water movements. Over the last decade, we have pursued an interdisciplinary approach by combining behavioral, electrophysiology, and robotics experiments to study this fascinating sensory system. In behavioral and electrophysiology experiments, we have studied the larval lateral line system in the model genetic organism, zebrafish (Danio rerio). We found that the lateral line system, even in 5-day-old larvae, is involved in an array of behaviors that are critical to survival, and the deflection of a single neuromast can elicit a swimming response. In robotics experiments, we used a range of physical models with distributed pressure sensors to better understand the hydrodynamic environments from the local perspective of a fish or robot. So far, our efforts have focused on extracting control-related information for a range of application scenarios including characterizing unsteady flows such as Kármán vortex streets for station holding. We also used robot models to test biological hypotheses on how morphology and movement of fishes affect lateral line sensing. Overall, with this review we aim to increase the visibility and accessibility of this multi-disciplinary research approach.
Collapse
Affiliation(s)
- Melanie Haehnel-Taguchi
- Faculty of Biology, Albert-Ludwigs Universität Freiburg, Hauptstraße 1, Freiburg D-79104, Germany
| | - Otar Akanyeti
- Department of Computer Science, Aberystwyth University, Penglais Campus, Aberystwyth SY23 3FL, UK
| | - James C Liao
- The Whitney Laboratory for Marine Bioscience, Department of Biology, University of Florida, St. Augustine, FL 32080, USA
| |
Collapse
|
11
|
Vanwalleghem G, Heap LA, Scott EK. A profile of auditory-responsive neurons in the larval zebrafish brain. J Comp Neurol 2017; 525:3031-3043. [DOI: 10.1002/cne.24258] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2017] [Revised: 05/26/2017] [Accepted: 05/29/2017] [Indexed: 12/19/2022]
Affiliation(s)
- Gilles Vanwalleghem
- School of Biomedical Sciences; The University of Queensland; St Lucia QLD Australia
| | - Lucy A. Heap
- School of Biomedical Sciences; The University of Queensland; St Lucia QLD Australia
| | - Ethan K. Scott
- School of Biomedical Sciences; The University of Queensland; St Lucia QLD Australia
- The Queensland Brain Institute, The University of Queensland; St Lucia QLD Australia
| |
Collapse
|
12
|
Ermakova YG, Lanin AA, Fedotov IV, Roshchin M, Kelmanson IV, Kulik D, Bogdanova YA, Shokhina AG, Bilan DS, Staroverov DB, Balaban PM, Fedotov AB, Sidorov-Biryukov DA, Nikitin ES, Zheltikov AM, Belousov VV. Thermogenetic neurostimulation with single-cell resolution. Nat Commun 2017; 8:15362. [PMID: 28530239 PMCID: PMC5493594 DOI: 10.1038/ncomms15362] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Accepted: 03/22/2017] [Indexed: 02/04/2023] Open
Abstract
Thermogenetics is a promising innovative neurostimulation technique, which enables robust activation of neurons using thermosensitive transient receptor potential (TRP) cation channels. Broader application of this approach in neuroscience is, however, hindered by a limited variety of suitable ion channels, and by low spatial and temporal resolution of neuronal activation when TRP channels are activated by ambient temperature variations or chemical agonists. Here, we demonstrate rapid, robust and reproducible repeated activation of snake TRPA1 channels heterologously expressed in non-neuronal cells, mouse neurons and zebrafish neurons in vivo by infrared (IR) laser radiation. A fibre-optic probe that integrates a nitrogen-vacancy (NV) diamond quantum sensor with optical and microwave waveguide delivery enables thermometry with single-cell resolution, allowing neurons to be activated by exceptionally mild heating, thus preventing the damaging effects of excessive heat. The neuronal responses to the activation by IR laser radiation are fully characterized using Ca2+ imaging and electrophysiology, providing, for the first time, a complete framework for a thermogenetic manipulation of individual neurons using IR light.
Collapse
Affiliation(s)
- Yulia G. Ermakova
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia
- Pirogov Russian National Research Medical University, Moscow 117997, Russia
| | - Aleksandr A. Lanin
- Physics Department, International Laser Center, M.V. Lomonosov Moscow State University, Moscow 119992, Russia
- Department of Physics and Astronomy, Texas A&M University, College Station, Texas 77843, USA
- Russian Quantum Center, ul. Novaya 100, Skolkovo, Moscow Region 143025, Russia
- Kazan Quantum Center, A.N. Tupolev Kazan National Research Technical University, 420126 Kazan, Russia
| | - Ilya V. Fedotov
- Physics Department, International Laser Center, M.V. Lomonosov Moscow State University, Moscow 119992, Russia
- Russian Quantum Center, ul. Novaya 100, Skolkovo, Moscow Region 143025, Russia
- Kazan Quantum Center, A.N. Tupolev Kazan National Research Technical University, 420126 Kazan, Russia
- Kurchatov Institute National Research Center, Moscow 123182, Russia
| | - Matvey Roshchin
- Institute of Higher Nervous Activity and Neurophysiology, Moscow 117485, Russia
| | - Ilya V. Kelmanson
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia
| | - Dmitry Kulik
- Physics Department, International Laser Center, M.V. Lomonosov Moscow State University, Moscow 119992, Russia
- Present address: Zaporizhya State Engineering Academy, 69006 Zaporizhzhya, Ukraine
| | - Yulia A. Bogdanova
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia
| | - Arina G. Shokhina
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia
| | - Dmitry S. Bilan
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia
- Pirogov Russian National Research Medical University, Moscow 117997, Russia
| | - Dmitry B. Staroverov
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia
| | - Pavel M. Balaban
- Institute of Higher Nervous Activity and Neurophysiology, Moscow 117485, Russia
| | - Andrei B. Fedotov
- Physics Department, International Laser Center, M.V. Lomonosov Moscow State University, Moscow 119992, Russia
- Department of Physics and Astronomy, Texas A&M University, College Station, Texas 77843, USA
- Russian Quantum Center, ul. Novaya 100, Skolkovo, Moscow Region 143025, Russia
- Kazan Quantum Center, A.N. Tupolev Kazan National Research Technical University, 420126 Kazan, Russia
| | - Dmitry A. Sidorov-Biryukov
- Physics Department, International Laser Center, M.V. Lomonosov Moscow State University, Moscow 119992, Russia
- Russian Quantum Center, ul. Novaya 100, Skolkovo, Moscow Region 143025, Russia
- Kazan Quantum Center, A.N. Tupolev Kazan National Research Technical University, 420126 Kazan, Russia
| | - Evgeny S. Nikitin
- Institute of Higher Nervous Activity and Neurophysiology, Moscow 117485, Russia
| | - Aleksei M. Zheltikov
- Physics Department, International Laser Center, M.V. Lomonosov Moscow State University, Moscow 119992, Russia
- Department of Physics and Astronomy, Texas A&M University, College Station, Texas 77843, USA
- Russian Quantum Center, ul. Novaya 100, Skolkovo, Moscow Region 143025, Russia
- Kazan Quantum Center, A.N. Tupolev Kazan National Research Technical University, 420126 Kazan, Russia
- Kurchatov Institute National Research Center, Moscow 123182, Russia
| | - Vsevolod V. Belousov
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia
- Pirogov Russian National Research Medical University, Moscow 117997, Russia
- Institute for Cardiovascular Physiology, Georg August University Göttingen, D-37075 Göttingen, Germany
| |
Collapse
|
13
|
Troconis EL, Ordoobadi AJ, Sommers TF, Aziz‐Bose R, Carter AR, Trapani JG. Intensity-dependent timing and precision of startle response latency in larval zebrafish. J Physiol 2017; 595:265-282. [PMID: 27228964 PMCID: PMC5199724 DOI: 10.1113/jp272466] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2016] [Accepted: 05/17/2016] [Indexed: 01/12/2023] Open
Abstract
KEY POINTS Using high-speed videos time-locked with whole-animal electrical recordings, simultaneous measurement of behavioural kinematics and field potential parameters of C-start startle responses allowed for discrimination between short-latency and long-latency C-starts (SLCs vs. LLCs) in larval zebrafish. Apart from their latencies, SLC kinematics and SLC field potential parameters were intensity independent. Increasing stimulus intensity increased the probability of evoking an SLC and decreased mean SLC latencies while increasing their precision; subtraction of field potential latencies from SLC latencies revealed a fixed time delay between the two measurements that was intensity independent. The latency and the precision in the latency of the SLC field potentials were linearly correlated to the latencies and precision of the first evoked action potentials (spikes) in hair-cell afferent neurons of the lateral line. Together, these findings indicate that first spike latency (FSL) is a fast encoding mechanism that can serve to precisely initiate startle responses when speed is critical for survival. ABSTRACT Vertebrates rely on fast sensory encoding for rapid and precise initiation of startle responses. In afferent sensory neurons, trains of action potentials (spikes) encode stimulus intensity within the onset time of the first evoked spike (first spike latency; FSL) and the number of evoked spikes. For speed of initiation of startle responses, FSL would be the more advantageous mechanism to encode the intensity of a threat. However, the intensity dependence of FSL and spike number and whether either determines the precision of startle response initiation is not known. Here, we examined short-latency startle responses (SLCs) in larval zebrafish and tested the hypothesis that first spike latencies and their precision (jitter) determine the onset time and precision of SLCs. We evoked startle responses via activation of Channelrhodopsin (ChR2) expressed in ear and lateral line hair cells and acquired high-speed videos of head-fixed larvae while simultaneously recording underlying field potentials. This method allowed for discrimination between primary SLCs and less frequent, long-latency startle responses (LLCs). Quantification of SLC kinematics and field potential parameters revealed that, apart from their latencies, they were intensity independent. We found that increasing stimulus intensity decreased SLC latencies while increasing their precision, which was significantly correlated with corresponding changes in field potential latencies and their precision. Single afferent neuron recordings from the lateral line revealed a similar intensity-dependent decrease in first spike latencies and their jitter, which could account for the intensity-dependent changes in timing and precision of startle response latencies.
Collapse
Affiliation(s)
| | | | | | | | - Ashley R. Carter
- Department of Physics and AstronomyAmherst CollegeAmherstMA01002USA
| | - Josef G. Trapani
- Department of BiologyAmherst CollegeAmherstMA01002USA
- Neuroscience ProgramAmherst CollegeAmherstMA01002USA
| |
Collapse
|
14
|
Asadnia M, Kottapalli AGP, Karavitaki KD, Warkiani ME, Miao J, Corey DP, Triantafyllou M. From Biological Cilia to Artificial Flow Sensors: Biomimetic Soft Polymer Nanosensors with High Sensing Performance. Sci Rep 2016; 6:32955. [PMID: 27622466 PMCID: PMC5020657 DOI: 10.1038/srep32955] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2016] [Accepted: 08/15/2016] [Indexed: 11/21/2022] Open
Abstract
We report the development of a new class of miniature all-polymer flow sensors that closely mimic the intricate morphology of the mechanosensory ciliary bundles in biological hair cells. An artificial ciliary bundle is achieved by fabricating bundled polydimethylsiloxane (PDMS) micro-pillars with graded heights and electrospinning polyvinylidenefluoride (PVDF) piezoelectric nanofiber tip links. The piezoelectric nature of a single nanofiber tip link is confirmed by X-ray diffraction (XRD) and Fourier transform infrared spectroscopy (FTIR). Rheology and nanoindentation experiments are used to ensure that the viscous properties of the hyaluronic acid (HA)-based hydrogel are close to the biological cupula. A dome-shaped HA hydrogel cupula that encapsulates the artificial hair cell bundle is formed through precision drop-casting and swelling processes. Fluid drag force actuates the hydrogel cupula and deflects the micro-pillar bundle, stretching the nanofibers and generating electric charges. Functioning with principles analogous to the hair bundles, the sensors achieve a sensitivity and threshold detection limit of 300 mV/(m/s) and 8 μm/s, respectively. These self-powered, sensitive, flexible, biocompatibale and miniaturized sensors can find extensive applications in navigation and maneuvering of underwater robots, artificial hearing systems, biomedical and microfluidic devices.
Collapse
Affiliation(s)
- Mohsen Asadnia
- School of Mechanical & Aerospace Engineering, Nanyang Technological University, 50 Nanyang Avenue, 639798 Singapore
- Department of Engineering, Macquarie University, Sydney, New South Wales 2109, Australia
| | - Ajay Giri Prakash Kottapalli
- Center for Environmental Sensing and Modeling (CENSAM) IRG Singapore-MIT Alliance for Research and Technology (SMART) Centre, 3 Science Drive 2, 117543 Singapore
| | - K. Domenica Karavitaki
- Howard Hughes Medical Institute and Department of Neurobiology, Harvard Medical School, 220 Longwood Avenue, Boston, MA 02115, USA
| | - Majid Ebrahimi Warkiani
- School of Mechanical and Manufacturing Engineering, Australian Centre for NanoMedicine, University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Jianmin Miao
- School of Mechanical & Aerospace Engineering, Nanyang Technological University, 50 Nanyang Avenue, 639798 Singapore
| | - David P. Corey
- Howard Hughes Medical Institute and Department of Neurobiology, Harvard Medical School, 220 Longwood Avenue, Boston, MA 02115, USA
| | - Michael Triantafyllou
- Center for Environmental Sensing and Modeling (CENSAM) IRG Singapore-MIT Alliance for Research and Technology (SMART) Centre, 3 Science Drive 2, 117543 Singapore
- Department of Mechanical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA
| |
Collapse
|
15
|
Lv C, Stewart WJ, Akanyeti O, Frederick C, Zhu J, Santos-Sacchi J, Sheets L, Liao JC, Zenisek D. Synaptic Ribbons Require Ribeye for Electron Density, Proper Synaptic Localization, and Recruitment of Calcium Channels. Cell Rep 2016; 15:2784-95. [PMID: 27292637 DOI: 10.1016/j.celrep.2016.05.045] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2015] [Revised: 04/06/2016] [Accepted: 05/10/2016] [Indexed: 10/21/2022] Open
Abstract
Synaptic ribbons are structures made largely of the protein Ribeye that hold synaptic vesicles near release sites in non-spiking cells in some sensory systems. Here, we introduce frameshift mutations in the two zebrafish genes encoding for Ribeye and thus remove Ribeye protein from neuromast hair cells. Despite Ribeye depletion, vesicles collect around ribbon-like structures that lack electron density, which we term "ghost ribbons." Ghost ribbons are smaller in size but possess a similar number of smaller vesicles and are poorly localized to synapses and calcium channels. These hair cells exhibit enhanced exocytosis, as measured by capacitance, and recordings from afferent neurons post-synaptic to hair cells show no significant difference in spike rates. Our results suggest that Ribeye makes up most of the synaptic ribbon density in neuromast hair cells and is necessary for proper localization of calcium channels and synaptic ribbons.
Collapse
Affiliation(s)
- Caixia Lv
- Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, CT 06520-8066, USA
| | - William J Stewart
- The Whitney Laboratory for Marine Bioscience and Department of Biology, University of Florida, St. Augustine, FL 32080, USA
| | - Otar Akanyeti
- The Whitney Laboratory for Marine Bioscience and Department of Biology, University of Florida, St. Augustine, FL 32080, USA
| | - Courtney Frederick
- Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, CT 06520-8066, USA
| | - Jie Zhu
- Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, CT 06520-8066, USA
| | - Joseph Santos-Sacchi
- Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, CT 06520-8066, USA; Department of Surgery (Otolaryngology), Yale University School of Medicine, New Haven, CT 06520-8066, USA; Department of Neuroscience, Yale University School of Medicine, New Haven, CT 06520-8066, USA
| | - Lavinia Sheets
- Eaton-Peabody Laboratory, Massachusetts Eye and Ear Infirmary, Boston, MA 02114, USA; Department of Otolaryngology, Harvard Medical School, Boston, MA 02114, USA
| | - James C Liao
- The Whitney Laboratory for Marine Bioscience and Department of Biology, University of Florida, St. Augustine, FL 32080, USA
| | - David Zenisek
- Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, CT 06520-8066, USA; Department of Opthalmology and Visual Sciences, Yale University School of Medicine, New Haven, CT 06520-8066, USA.
| |
Collapse
|