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Jeon YH, Park C, Lee KH, Choi KS, Lee JY, Hwang I, Yoo RE, Yun TJ, Choi SH, Kim JH, Sohn CH, Kang KM. Accelerated intracranial time-of-flight MR angiography with image-based deep learning image enhancement reduces scan times and improves image quality at 3-T and 1.5-T. Neuroradiology 2025:10.1007/s00234-025-03564-7. [PMID: 40095006 DOI: 10.1007/s00234-025-03564-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2024] [Accepted: 02/10/2025] [Indexed: 03/19/2025]
Abstract
PURPOSE Three-dimensional time-of-flight magnetic resonance angiography (TOF-MRA) is effective for cerebrovascular disease assessment, but clinical application is limited by long scan times and low spatial resolution. Recent advances in deep learning-based reconstruction have shown the potential to improve image quality and reduce scan times. This study aimed to evaluate the effectiveness of accelerated intracranial TOF-MRA using deep learning-based image enhancement (TOF-DL) compared to conventional TOF-MRA (TOF-Con) at both 3-T and 1.5-T. MATERIALS AND METHODS In this retrospective study, patients who underwent both conventional and 40% accelerated TOF-MRA protocols on 1.5-T or 3-T scanners from July 2022 to March 2023 were included. A commercially available DL-based image enhancement algorithm was applied to the accelerated MRA. Quantitative image quality assessments included signal-to-noise ratio (SNR), contrast-to-noise ratio (CNR), contrast ratio (CR), and vessel sharpness (VS), while qualitative assessments were conducted using a five-point Likert scale. Cohen's d was used to compare the quantitative image metrics, and a cumulative link mixed regression model analyzed the readers' scores. RESULTS A total of 129 patients (mean age, 64 years ± 12 [SD], 99 at 3-T and 30 at 1.5-T) were included. TOF-DL showed significantly higher SNR, CNR, CR, and VS compared to TOF-Con (CNR = 183.89 vs. 45.58; CR = 0.63 vs. 0.59; VS = 0.73 vs. 0.61; all p < 0.001). The improvement in VS was more pronounced at 1.5-T (Cohen's d = 2.39) compared to 3-T HR and routine (Cohen's d = 0.83 and 0.75, respectively). TOF-DL also outperformed TOF-Con in qualitative image parameters, enhancing the visibility of small- and medium-sized vessels, regardless of the degree of resolution and field strength. TOF-DL showed comparable diagnostic accuracy (AUC: 0.77-0.85) to TOF-Con (AUC: 0.79-0.87) but had higher specificity for steno-occlusive lesions. CONCLUSIONS Accelerated intracranial MRA with deep learning-based reconstruction reduces scan times by 40% and significantly enhances image quality over conventional TOF-MRA at both 3-T and 1.5-T.
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Affiliation(s)
- Young Hun Jeon
- Seoul National University Hospital, Seoul, Republic of Korea
| | - Chanrim Park
- Seoul National University Hospital, Seoul, Republic of Korea
| | | | - Kyu Sung Choi
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Ji Ye Lee
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Inpyeong Hwang
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Roh-Eul Yoo
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Tae Jin Yun
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Seung Hong Choi
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Ji-Hoon Kim
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Chul-Ho Sohn
- Seoul National University Hospital, Seoul, Republic of Korea
- Seoul National University, Seoul, Republic of Korea
| | - Koung Mi Kang
- Seoul National University Hospital, Seoul, Republic of Korea.
- Seoul National University, Seoul, Republic of Korea.
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Bayram B, Kunduracioglu I, Ince S, Pacal I. A systematic review of deep learning in MRI-based cerebral vascular occlusion-based brain diseases. Neuroscience 2025; 568:76-94. [PMID: 39805420 DOI: 10.1016/j.neuroscience.2025.01.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2024] [Revised: 01/09/2025] [Accepted: 01/10/2025] [Indexed: 01/16/2025]
Abstract
Neurological disorders, including cerebral vascular occlusions and strokes, present a major global health challenge due to their high mortality rates and long-term disabilities. Early diagnosis, particularly within the first hours, is crucial for preventing irreversible damage and improving patient outcomes. Although neuroimaging techniques like magnetic resonance imaging (MRI) have advanced significantly, traditional methods often fail to fully capture the complexity of brain lesions. Deep learning has recently emerged as a powerful tool in medical imaging, offering high accuracy in detecting and segmenting brain anomalies. This review examines 61 MRI-based studies published between 2020 and 2024, focusing on the role of deep learning in diagnosing cerebral vascular occlusion-related conditions. It evaluates the successes and limitations of these studies, including the adequacy and diversity of datasets, and addresses challenges such as data privacy and algorithm explainability. Comparisons between convolutional neural network (CNN)-based and Vision Transformer (ViT)-based approaches reveal distinct advantages and limitations. The findings emphasize the importance of ethically secure frameworks, the inclusion of diverse datasets, and improved model interpretability. Advanced architectures like U-Net variants and transformer-based models are highlighted as promising tools to enhance reliability in clinical applications. By automating complex neuroimaging tasks and improving diagnostic accuracy, deep learning facilitates personalized treatment strategies. This review provides a roadmap for integrating technical advancements into clinical practice, underscoring the transformative potential of deep learning in managing neurological disorders and improving healthcare outcomes globally.
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Affiliation(s)
- Bilal Bayram
- Department of Neurology, University of Health Sciences, Van Education and Research Hospital, 65000, Van, Turkey.
| | - Ismail Kunduracioglu
- Department of Computer Engineering, Faculty of Engineering, Igdir University, 76000, Igdir, Turkey.
| | - Suat Ince
- Department of Radiology, University of Health Sciences, Van Education and Research Hospital, 65000, Van, Turkey.
| | - Ishak Pacal
- Department of Computer Engineering, Faculty of Engineering, Igdir University, 76000, Igdir, Turkey.
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Rehwald R, Sudre CH, Smith L, Sokolska M, Tillin T, Atkinson D, Chaturvedi N, Hughes AD, Jäger HR. High-Resolution MRA Cerebrovascular Findings in a Tri-Ethnic Population. AJNR Am J Neuroradiol 2024; 45:1661-1669. [PMID: 38997120 PMCID: PMC11543068 DOI: 10.3174/ajnr.a8402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2024] [Accepted: 06/28/2024] [Indexed: 07/14/2024]
Abstract
BACKGROUND AND PURPOSE Incidental findings on brain MRI and variations of the circle of Willis (CoW) are relatively common among the general population. Ethnic differences have been described before, but few studies have explored the prevalence of incidental intracranial cerebrovascular findings and CoW variants in the setting of a single multiethnic cohort. The purpose of this investigation was to describe both incidental cerebrovascular findings and the morphology of the CoW on high-resolution 3T TOF-MRA in a UK tri-ethnic population-based cohort and to present updated prevalence estimates and morphologic reference values. MATERIALS AND METHODS We studied participants from the UK Southall and Brent REvisited study who underwent 3T brain MRI between 2014 and 2018. TOF-MRA images were assessed for the presence of incidental cerebrovascular findings and used to determine CoW anatomy. RESULTS Seven hundred fifty participants (mean age, 71.28 [SD, 6.46] years; range, 46-90 years; 337 women), 322 White Europeans, 253 South Asians, and 175 African Caribbeans were included. Incidental cerebrovascular findings were observed in 84 subjects (11.2%, 95% CI, 9.0%-13.7%; 36 women; 42.86%, 95% CI, 32.11%-54.12%), with cerebral aneurysms being the most frequent followed by intracranial arterial stenoses with the highest prevalence among South Asians compared with White European (OR: 2.72; 95% CI, 1.22-6.08; P = .015) and African Caribbean subjects (OR: 2.79; 95% CI, 1.00-7.82; P = .051). Other findings included arteriovenous malformations and infundibula. The CoW was found to be more often complete in women than in men (25.22% compared with 18.41%, P = .024) and in African Caribbean (34.86%) compared with White European (19.19%) and South Asian (14.23%) subjects (P < .001 each). CONCLUSIONS Intracranial arterial stenoses were independently associated with ethnicity after adjusting for vascular risk factors, having the highest prevalence among South Asians. The prevalence of aneurysms was higher than that in previous population-based studies. We observed anatomic differences in the CoW configuration among women, men, and ethnicities.
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Affiliation(s)
- Rafael Rehwald
- From the Neuroradiological Academic Unit (R.R., M.S., H.R.J.), Department of Brain Repair and Rehabilitation, UCL Queen Square Institute of Neurology, University College London London, UK
| | - Carole H Sudre
- MRC Unit for Lifelong Health and Ageing at University college London (C.H.S., T.T., N.C., A.D.H.), Institute of Cardiovascular Science, University College London, London, UK
- Dementia Research Centre (C.H.S.), University College London Queen Square Institute of Neurology, University College London, London, UK
- School of Biomedical Engineering (C.H.S.), King's College, London, UK
| | - Lorna Smith
- Centre for Medical Imaging (L.S., D.A.), Division of Medicine, University College London, London, UK
| | - Magdalena Sokolska
- From the Neuroradiological Academic Unit (R.R., M.S., H.R.J.), Department of Brain Repair and Rehabilitation, UCL Queen Square Institute of Neurology, University College London London, UK
- Department of Medical Physics and Biomedical Engineering (M.S.), University College London Hospitals National Health Service (NHS) Foundation Trust, London, UK
| | - Therese Tillin
- MRC Unit for Lifelong Health and Ageing at University college London (C.H.S., T.T., N.C., A.D.H.), Institute of Cardiovascular Science, University College London, London, UK
| | - David Atkinson
- Centre for Medical Imaging (L.S., D.A.), Division of Medicine, University College London, London, UK
| | - Nishi Chaturvedi
- MRC Unit for Lifelong Health and Ageing at University college London (C.H.S., T.T., N.C., A.D.H.), Institute of Cardiovascular Science, University College London, London, UK
| | - Alun D Hughes
- MRC Unit for Lifelong Health and Ageing at University college London (C.H.S., T.T., N.C., A.D.H.), Institute of Cardiovascular Science, University College London, London, UK
| | - Hans Rolf Jäger
- From the Neuroradiological Academic Unit (R.R., M.S., H.R.J.), Department of Brain Repair and Rehabilitation, UCL Queen Square Institute of Neurology, University College London London, UK
- Lysholm Department of Neuroradiology (H.R.J.), National Hospital for Neurology and Neurosurgery, Holborn, London, UK
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Vach M, Wolf L, Weiss D, Ivan VL, Hofmann BB, Himmelspach L, Caspers J, Rubbert C. Reproducibility and across-site transferability of an improved deep learning approach for aneurysm detection and segmentation in time-of-flight MR-angiograms. Sci Rep 2024; 14:18749. [PMID: 39138338 PMCID: PMC11322557 DOI: 10.1038/s41598-024-68805-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 07/29/2024] [Indexed: 08/15/2024] Open
Abstract
This study aimed to (1) replicate a deep-learning-based model for cerebral aneurysm segmentation in TOF-MRAs, (2) improve the approach by testing various fully automatic pre-processing pipelines, and (3) rigorously validate the model's transferability on independent, external test-datasets. A convolutional neural network was trained on 235 TOF-MRAs acquired on local scanners from a single vendor to segment intracranial aneurysms. Different pre-processing pipelines including bias field correction, resampling, cropping and intensity-normalization were compared regarding their effect on model performance. The models were tested on independent, external same-vendor and other-vendor test-datasets, each comprised of 70 TOF-MRAs, including patients with and without aneurysms. The best-performing model achieved excellent results on the external same-vendor test-dataset, surpassing the results of the previous publication with an improved sensitivity (0.97 vs. ~ 0.86), a higher Dice score coefficient (DSC, 0.60 ± 0.25 vs. 0.53 ± 0.31), and an improved false-positive rate (0.87 ± 1.35 vs. ~ 2.7 FPs/case). The model further showed excellent performance in the external other-vendor test-datasets (DSC 0.65 ± 0.26; sensitivity 0.92, 0.96 ± 2.38 FPs/case). Specificity was 0.38 and 0.53, respectively. Raising the voxel-size from 0.5 × 0.5×0.5 mm to 1 × 1×1 mm reduced the false-positive rate seven-fold. This study successfully replicated core principles of a previous approach for detecting and segmenting cerebral aneurysms in TOF-MRAs with a robust, fully automatable pre-processing pipeline. The model demonstrated robust transferability on two independent external datasets using TOF-MRAs from the same scanner vendor as the training dataset and from other vendors. These findings are very encouraging regarding the clinical application of such an approach.
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Affiliation(s)
- Marius Vach
- Department of Diagnostic and Interventional Radiology, Medical Faculty and University Hospital Düsseldorf, Heinrich-Heine-University Düsseldorf, Moorenstraße 5, 40225, Düsseldorf, Germany
| | - Luisa Wolf
- Department of Diagnostic and Interventional Radiology, Medical Faculty and University Hospital Düsseldorf, Heinrich-Heine-University Düsseldorf, Moorenstraße 5, 40225, Düsseldorf, Germany.
| | - Daniel Weiss
- Department of Diagnostic and Interventional Radiology, Medical Faculty and University Hospital Düsseldorf, Heinrich-Heine-University Düsseldorf, Moorenstraße 5, 40225, Düsseldorf, Germany
| | - Vivien Lorena Ivan
- Department of Diagnostic and Interventional Radiology, Medical Faculty and University Hospital Düsseldorf, Heinrich-Heine-University Düsseldorf, Moorenstraße 5, 40225, Düsseldorf, Germany
| | - Björn B Hofmann
- Department of Neurosurgery, Medical Faculty and University Hospital Düsseldorf, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany
| | - Ludmila Himmelspach
- Heine Center for Artificial Intelligence and Data Science (HeiCAD), Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany
| | - Julian Caspers
- Department of Diagnostic and Interventional Radiology, Medical Faculty and University Hospital Düsseldorf, Heinrich-Heine-University Düsseldorf, Moorenstraße 5, 40225, Düsseldorf, Germany
| | - Christian Rubbert
- Department of Diagnostic and Interventional Radiology, Medical Faculty and University Hospital Düsseldorf, Heinrich-Heine-University Düsseldorf, Moorenstraße 5, 40225, Düsseldorf, Germany
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Andreev A, Vranic JE, Doron O, Regenhardt RW, Patel AB. Azygos anterior cerebral artery shield masquerading as an aneurysm. Neuroradiol J 2024; 37:244-246. [PMID: 37144797 PMCID: PMC10973830 DOI: 10.1177/19714009231173106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/06/2023] Open
Abstract
Here, we describe a case of a woman suspected to have an anterior cerebral artery (ACA) aneurysm that was ultimately found to have an azygous ACA shield. This benign entity highlights the importance of thorough investigation with cerebral digital subtraction angiography (DSA). This 73-year-old female initially presented with dyspnea and dizziness. CT angiogram of the head suggested an incidental 5 mm ACA aneurysm. Subsequent DSA demonstrated a Type I azygos ACA supplied by the left A1 segment. Also noted was a focal dilatation of the azygos trunk as it gave rise to the bilateral pericallosal and callosomarginal arteries. Three-dimensional visualization demonstrated a benign dilatation secondary to the four vessels branching; no aneurysm was noted. Incidence of aneurysms at the distal dividing point of an azygos ACA ranges from 13% to 71%. However, careful anatomical examination is imperative as findings may be a benign dilatation for which case intervention is not indicated.
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Affiliation(s)
- Alexander Andreev
- Beth Israel Deaconess Medical Center, Department of Neurology, Boston, MA, USA
| | - Justin E Vranic
- Massachusetts General Hospital, Department of Neurosurgery, Boston, MA, USA
| | - Omer Doron
- Massachusetts General Hospital, Department of Neurosurgery, Boston, MA, USA
| | | | - Aman B Patel
- Massachusetts General Hospital, Department of Neurosurgery, Boston, MA, USA
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Park HY, Suh CH, Shim WH, Heo H, Kim WS, Lim JS, Lee JH, Kim HS, Kim SJ. Diagnostic yield of TOF-MRA for detecting incidental vascular lesions in patients with cognitive impairment: An observational cohort study. Front Neurol 2022; 13:958037. [PMID: 36090850 PMCID: PMC9453548 DOI: 10.3389/fneur.2022.958037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 08/02/2022] [Indexed: 11/23/2022] Open
Abstract
Objectives The role of three-dimensional (3D) TOF-MRA in patients with cognitive impairment is not well established. We evaluated the diagnostic yield of 3D TOF-MRA for detecting incidental extra- or intracranial artery stenosis and intracranial aneurysm in this patient group. Methods This retrospective study included patients with cognitive impairment undergoing our brain MRI protocol from January 2013 to February 2020. The diagnostic yield of TOF-MRA for detecting incidental vascular lesions was calculated. Patients with positive TOF-MRA results were reviewed to find whether additional treatment was performed. Logistic regression analysis was conducted to identify the clinical risk factors for positive TOF-MRA findings. Results In total, 1,753 patients (mean age, 70.2 ± 10.6 years; 1,044 women) were included; 199 intracranial aneurysms were detected among 162 patients (9.2%, 162/1,753). A 3D TOF-MRA revealed significant artery stenoses (>50% stenosis) in 162 patients (9.2%, 162/1,753). The overall diagnostic yield of TOF-MRA was 16.8% (294/1,753). Among them, 92 patients (31.3%, 92/294) underwent either medical therapy, endovascular intervention, or surgery. In total, eighty-one patients with stenosis were prescribed with either antiplatelet medications or lipid-lowering agent. In total, fifteen patients (aneurysm: 11 patients, stenosis: 4 patients) were further treated with endovascular intervention or surgery. Thus, the “number needed to scan” was 19 for identifying one patient requiring treatment. Multivariate logistic regression analysis showed that being female (odds ratio [OR] 2.05) and old age (OR 1.04) were the independent risk factors for intracranial aneurysm; being male (OR 1.52), old age (OR 1.06), hypertension (OR 1.78), and ischemic heart disease history (OR 2.65) were the independent risk factors for significant artery stenosis. Conclusions Our study demonstrated the potential benefit of 3D TOF-MRA, given that it showed high diagnostic yield for detecting vascular lesions in patients with cognitive impairment and the considerable number of these lesions required further treatment. A 3D TOF-MRA may be included in the routine MR protocol for the work-up of this patient population, especially in older patients and patients with vascular risk factors.
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Affiliation(s)
- Ho Young Park
- Department of Radiology and Research, Asan Medical Center, Institute of Radiology, University of Ulsan College of Medicine, Seoul, South Korea
| | - Chong Hyun Suh
- Department of Radiology and Research, Asan Medical Center, Institute of Radiology, University of Ulsan College of Medicine, Seoul, South Korea
- *Correspondence: Chong Hyun Suh
| | - Woo Hyun Shim
- Department of Radiology and Research, Asan Medical Center, Institute of Radiology, University of Ulsan College of Medicine, Seoul, South Korea
| | - Hwon Heo
- Department of Radiology and Research, Asan Medical Center, Institute of Radiology, University of Ulsan College of Medicine, Seoul, South Korea
| | - Woo Seok Kim
- Department of Radiology and Research, Asan Medical Center, Institute of Radiology, University of Ulsan College of Medicine, Seoul, South Korea
| | - Jae-Sung Lim
- Department of Neurology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea
| | - Jae-Hong Lee
- Department of Neurology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea
| | - Ho Sung Kim
- Department of Radiology and Research, Asan Medical Center, Institute of Radiology, University of Ulsan College of Medicine, Seoul, South Korea
| | - Sang Joon Kim
- Department of Radiology and Research, Asan Medical Center, Institute of Radiology, University of Ulsan College of Medicine, Seoul, South Korea
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Johnsen LH, Herder M, Vangberg T, Kloster R, Ingebrigtsen T, Isaksen JG, Mathiesen EB. Prevalence of unruptured intracranial aneurysms: impact of different definitions - the Tromsø Study. J Neurol Neurosurg Psychiatry 2022; 93:902-907. [PMID: 35688631 DOI: 10.1136/jnnp-2022-329270] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 05/10/2022] [Indexed: 11/03/2022]
Abstract
BACKGROUND Management of incidental unruptured intracranial aneurysms (UIAs) remains challenging and depends on their risk of rupture, estimated from the assumed prevalence of aneurysms and the incidence of aneurysmal subarachnoid haemorrhage. Reported prevalence varies, and consistent criteria for definition of UIAs are lacking. We aimed to study the prevalence of UIAs in a general population according to different definitions of aneurysm. METHODS Cross-sectional population-based study using 3-dimensional time-of-flight 3 Tesla MR angiography to identify size, type and location of UIAs in 1862 adults aged 40-84 years. Size was measured as the maximal distance between any two points in the aneurysm sac. Prevalence was estimated for different diameter cutoffs (≥1, 2 and 3 mm) with and without inclusion of extradural aneurysms. RESULTS The overall prevalence of intradural saccular aneurysms ≥2 mm was 6.6% (95% CI 5.4% to 7.6%), 7.5% (95% CI 5.9% to 9.2%) in women and 5.5% (95% CI 4.1% to 7.2%) in men. Depending on the definition of an aneurysm, the overall prevalence ranged from 3.8% (95% CI 3.0% to 4.8%) for intradural aneurysms ≥3 mm to 8.3% (95% CI 7.1% to 9.7%) when both intradural and extradural aneurysms ≥1 mm were included. CONCLUSION Prevalence in this study was higher than previously observed in other Western populations and was substantially influenced by definitions according to size and extradural or intradural location. The high prevalence of UIAs sized <5 mm may suggest lower rupture risk than previously estimated. Consensus on more robust and consistent radiological definitions of UIAs is warranted.
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Affiliation(s)
- Liv-Hege Johnsen
- Department of Radiology, University Hospital of North Norway, Tromso, Norway .,Department of Clinical Medicine, UiT The Arctic University, Tromso, Norway
| | - Marit Herder
- Department of Radiology, University Hospital of North Norway, Tromso, Norway.,Department of Clinical Medicine, UiT The Arctic University, Tromso, Norway
| | - Torgil Vangberg
- Department of Clinical Medicine, UiT The Arctic University, Tromso, Norway.,PET Imaging Center, University Hospital of North Norway, Tromso, Norway
| | - Roar Kloster
- Department of Clinical Medicine, UiT The Arctic University, Tromso, Norway.,Department of Neurosurgery, Ophthalmology, and Otorhinolaryngology, University Hospital of North Norway, Tromso, Norway
| | - Tor Ingebrigtsen
- Department of Clinical Medicine, UiT The Arctic University, Tromso, Norway.,Department of Neurosurgery, Ophthalmology, and Otorhinolaryngology, University Hospital of North Norway, Tromso, Norway
| | - Jørgen Gjernes Isaksen
- Department of Clinical Medicine, UiT The Arctic University, Tromso, Norway.,Department of Neurosurgery, Ophthalmology, and Otorhinolaryngology, University Hospital of North Norway, Tromso, Norway
| | - Ellisiv B Mathiesen
- Department of Clinical Medicine, UiT The Arctic University, Tromso, Norway.,Department of Neurology, University Hospital of North Norway, Tromso, Norway
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OTO-Net: An Automated MRA Image Segmentation Network for Intracranial Aneurysms. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:5333589. [PMID: 35463249 PMCID: PMC9023216 DOI: 10.1155/2022/5333589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Revised: 03/08/2022] [Accepted: 03/17/2022] [Indexed: 11/17/2022]
Abstract
Intracranial aneurysms are local dilations of the cerebral blood vessels; people with intracranial aneurysms have a high risk to cause bleeding in the brain, which is related to high mortality and morbidity rates. Accurate detection and segmentation of intracranial aneurysms from Magnetic Resonance Angiography (MRA) images are essential in the clinical routine. Manual annotations used to assess the intracranial aneurysms on MRA images are substantial interobserver variability for both aneurysm detection and assessment of aneurysm size and growth. Many prior automated segmentation works have focused their efforts on tackling the problem, but there is still room for performance improvement due to the significant variability of lesions in the location, size, structure, and morphological appearance. To address these challenges, we propose a novel One-Two-One Fully Convolutional Networks (OTO-Net) for intracranial aneurysms automated segmentation in MRA images. The OTO-Net uses full convolution to achieve intracranial aneurysms automated segmentation through the combination of downsampling, upsampling, and skip connection. In addition, loss ensemble is used as the objective function to steadily improve the backpropagation efficiency of the network structure during the training process. We evaluated the proposed OTO-Net on one public benchmark dataset and one private dataset. Our proposed model can achieve the automated segmentation accuracy with 98.37% and 97.86%, average surface distances with 1.081 and 0.753, dice similarity coefficients with 0.9721 and 0.9813, and Hausdorff distance with 0.578 and 0.642 on these two datasets, respectively.
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Ciulla C. Inverse Fourier transformation of combined first order derivative and intensity-curvature functional of magnetic resonance angiography of the human brain. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2021; 211:106384. [PMID: 34537491 DOI: 10.1016/j.cmpb.2021.106384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Accepted: 08/26/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND AND OBJECTIVE This paper reports a novel image processing technique based on inverse Fourier transformation and its validation procedure. METHODS Magnetic Resonance Angiography (MRA) data of the human brain is fitted on a pixel-by-pixel basis with bivariate linear model polynomial function. Polynomial fitting allows the formulation of two measures: the first order derivative (FOD), which is an edge finder, and the intensity-curvature functional (ICF), which is a high pass filter. The calculation of FOD and ICF uses knowledge provided by existing research and is performed through resampling. ICF and FOD are direct Fourier transformed, and their k-space is combined through a nonlinear convolution of terms. The resulting k-space is inverse Fourier transformed so to obtain a novel image called Fourier Convolution Image (FCI). RESULTS FCI possesses the characteristics of an edge finder (FOD) and a high pass filter (ICF). CONCLUSIONS FC images yield the following properties versus MRA: 1. Change of the contrast; 2. Increased sharpness in the proximity of human brain vessels; 3. Increased visualization of vessel connectivity. The implication of this study is to provide FCI as another viable option for MRA evaluation.
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Affiliation(s)
- Carlo Ciulla
- Department of Computer Engineering, Epoka University, Rr. Tiranë-Rinas, Km. 12, Vorë, Tirana 1032, Albania.
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10
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Mırçık E, Hakyemez B. New technique: the use of the THRIVE sequence in the follow-up of patients who received endovascular intracranial aneurysm treatment. Neuroradiology 2020; 63:399-407. [PMID: 32914366 DOI: 10.1007/s00234-020-02527-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Accepted: 08/16/2020] [Indexed: 11/26/2022]
Abstract
PURPOSE To determine the diagnostic accuracy of 3D time of flight MR angiography (TOF-MRA), contrast enhanced MR angiography (CE-MRA), and T1-weighted high-resolution isotropic volume examination (THRIVE) at 3 T for the evaluation of intracranial aneurysm occlusion after endovascular treatment and to evaluate the usability of the THRIVE sequence in endovascular treatment follow-up. METHODS In 3 T MR follow-up examinations of 66 aneurysms in 50 patients treated endovascularly, 3D TOF-MRA (index test), THRIVE (index test), and CE-MRA (reference standard) examinations were performed in a retrospective consecutive case series. Source images were classified as class 1, class 2, and class 3 according to the Raymond criteria using MIP (maximum intensity projection) techniques. The compatibility between sequences was evaluated with the Kappa test. The sensitivity and specificity were also calculated. RESULTS In the evaluation of THRIVE and CE-MRA sequences, compatibility was determined in 61 cases in total, with an overall fit of 61/66 (92.42%). A statistically significant correlation was found between THRIVE and CE-MRA (p < 0.001, κ = 0.800). In the evaluation of TOF and CE-MRA sequences, compatibility was determined in 54 cases in total, and the overall fit was 54/66 (81.8%). A statistically significant agreement was found between TOF and CE-MRA (p < 0.001, κ = 0.502). Assuming that CE-MRA is a reference standard, the sensitivity and specificity of the TOF sequence were 44.4% and 97.9%, respectively, and the sensitivity and specificity of the THRIVE sequence were 77.8% and 97.9%, respectively. CONCLUSION The THRIVE sequence can be used as a noncontrast method for monitoring endovascularly treated intracranial aneurysms.
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Affiliation(s)
- Emre Mırçık
- Department of Radiology, Patnos State Hospital, 04500, Patnos, Ağrı, Turkey
| | - Bahattin Hakyemez
- Department of Radiology, Bursa Uludag University Faculty of Medicine, 16059, Nilüfer, Bursa, Turkey.
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11
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Leemans E, Cornelissen B, Sing MLC, Sprengers M, van den Berg R, Roos Y, Vandertop WP, Slump C, Marquering H, Majoie C. 7T versus 3T MR Angiography to Assess Unruptured Intracranial Aneurysms. J Neuroimaging 2020; 30:779-785. [PMID: 32857906 PMCID: PMC7754498 DOI: 10.1111/jon.12772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Revised: 07/24/2020] [Accepted: 08/03/2020] [Indexed: 11/27/2022] Open
Abstract
BACKGROUND AND PURPOSE Aneurysm size and neck measurements are important for treatment decisions. The introduction of 7T magnetic resonance angiography (MRA) led to new possibilities assessing aneurysm morphology and flow due to the higher signal-to-noise ratio. However, it is unknown if the size measurements on 7T MRA are similar to those on the standard 3T MRA. This study aimed to compare aneurysm size measurements between 7T and 3T MRA. METHODS We included 18 patients with 22 aneurysms who underwent both 3T and 7T MRA. Three acquisition protocols were compared: 3T time of flight (TOF), 7T TOF, and 7T contrast-enhanced MRA. Each aneurysm on each protocol was measured by at least two experienced neuroradiologists. Subsequently, the differences were evaluated using scatterplots and the intraclass correlation coefficients (ICC) of agreement. RESULTS There was a good agreement among the neuroradiologists for the height and width measurements (mean ICC: .78-.93); the neck measurements showed a moderate agreement with a mean ICC of .57-.72. Between the MR acquisition protocols, there was a high agreement for all measurements with a mean ICC of .81-.96. Measurement differences between acquisition protocols (0-2.9 mm) were in the range of the differences between the neuroradiologists (0-3.6 mm). CONCLUSION Our study showed that 7T MRA, both nonenhanced and contrast-enhanced, has a high agreement in aneurysm size measurements compared to 3T. This suggests that 7T is useful for reliable aneurysm size assessment.
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Affiliation(s)
- Eva Leemans
- Department of Biomedical Engineering & Physics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.,Department of Radiology and Nuclear Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - Bart Cornelissen
- Department of Biomedical Engineering & Physics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.,MIRA Institute for Biomedical Engineering and Technical Medicine, University of Twente, Enschede, the Netherlands
| | - M L C Sing
- Department of Biomedical Engineering & Physics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - Marieke Sprengers
- Department of Radiology and Nuclear Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - Rene van den Berg
- Department of Radiology and Nuclear Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - Yvo Roos
- Department of Neurology, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - W Pieter Vandertop
- Neurosurgical Center Amsterdam, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - Cornelius Slump
- MIRA Institute for Biomedical Engineering and Technical Medicine, University of Twente, Enschede, the Netherlands
| | - Henk Marquering
- Department of Biomedical Engineering & Physics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.,Department of Radiology and Nuclear Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - Charles Majoie
- Department of Radiology and Nuclear Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
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12
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Sichtermann T, Faron A, Sijben R, Teichert N, Freiherr J, Wiesmann M. Deep Learning-Based Detection of Intracranial Aneurysms in 3D TOF-MRA. AJNR Am J Neuroradiol 2018; 40:25-32. [PMID: 30573461 DOI: 10.3174/ajnr.a5911] [Citation(s) in RCA: 82] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2018] [Accepted: 10/29/2018] [Indexed: 12/12/2022]
Abstract
BACKGROUND AND PURPOSE The rupture of an intracranial aneurysm is a serious incident, causing subarachnoid hemorrhage associated with high fatality and morbidity rates. Because the demand for radiologic examinations is steadily growing, physician fatigue due to an increased workload is a real concern and may lead to mistaken diagnoses of potentially relevant findings. Our aim was to develop a sufficient system for automated detection of intracranial aneurysms. MATERIALS AND METHODS In a retrospective study, we established a system for the detection of intracranial aneurysms from 3D TOF-MRA data. The system is based on an open-source neural network, originally developed for segmentation of anatomic structures in medical images. Eighty-five datasets of patients with a total of 115 intracranial aneurysms were used to train the system and evaluate its performance. Manual annotation of aneurysms based on radiologic reports and critical revision of image data served as the reference standard. Sensitivity, false-positives per case, and positive predictive value were determined for different pipelines with modified pre- and postprocessing. RESULTS The highest overall sensitivity of our system for the detection of intracranial aneurysms was 90% with a sensitivity of 96% for aneurysms with a diameter of 3-7 mm and 100% for aneurysms of >7 mm. The best location-dependent performance was in the posterior circulation. Pre- and postprocessing sufficiently reduced the number of false-positives. CONCLUSIONS Our system, based on a deep learning convolutional network, can detect intracranial aneurysms with a high sensitivity from 3D TOF-MRA data.
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Affiliation(s)
- T Sichtermann
- From the Department of Diagnostic and Interventional Neuroradiology (T.S., A.F., R.S., N.T., J.F., M.W.), University Hospital RWTH Aachen, Aachen, Germany
| | - A Faron
- From the Department of Diagnostic and Interventional Neuroradiology (T.S., A.F., R.S., N.T., J.F., M.W.), University Hospital RWTH Aachen, Aachen, Germany.,Department of Radiology (A.F.), University Hospital Bonn, Bonn, Germany
| | - R Sijben
- From the Department of Diagnostic and Interventional Neuroradiology (T.S., A.F., R.S., N.T., J.F., M.W.), University Hospital RWTH Aachen, Aachen, Germany
| | - N Teichert
- From the Department of Diagnostic and Interventional Neuroradiology (T.S., A.F., R.S., N.T., J.F., M.W.), University Hospital RWTH Aachen, Aachen, Germany.,Department of Radiology (A.F.), University Hospital Bonn, Bonn, Germany
| | - J Freiherr
- From the Department of Diagnostic and Interventional Neuroradiology (T.S., A.F., R.S., N.T., J.F., M.W.), University Hospital RWTH Aachen, Aachen, Germany
| | - M Wiesmann
- From the Department of Diagnostic and Interventional Neuroradiology (T.S., A.F., R.S., N.T., J.F., M.W.), University Hospital RWTH Aachen, Aachen, Germany
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13
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Montagnese F, Granata F, Musumeci O, Rodolico C, Mondello S, Barca E, Cucinotta M, Ciranni A, Longo M, Toscano A. Intracranial arterial abnormalities in patients with late onset Pompe disease (LOPD). J Inherit Metab Dis 2016; 39:391-398. [PMID: 26830551 DOI: 10.1007/s10545-015-9913-x] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/20/2015] [Revised: 12/22/2015] [Accepted: 12/23/2015] [Indexed: 10/22/2022]
Abstract
BACKGROUND AND OBJECTIVES Pompe disease is a rare metabolic disorder due to lysosomal alpha-glucosidase (GAA) deficiency. It is considered as a multi-systemic disease since, although glycogen accumulation is largely prominent in heart, skeletal and respiratory muscles, other organs can also be affected. As regards the vascular system, few reports have documented cerebrovascular malformations in Pompe patients. The aim of this study was to define the presence and type of intracranial arterial abnormalities in a cohort of late onset Pompe disease (LOPD) patients. METHODS We have studied 21 LOPD patients with cerebral CT angiography (CTA), using maximum intensity projection and volume rendering technique for 3D-image reconstruction. RESULTS We found intracranial arterial abnormalities in 13/21 patients (62 %), of whom: 2/21 patients (9.5 %) showed an unruptured intracranial aneurysm (respectively 2 and 4 mm), 10/21 (47 %) had a vertebrobasilar dolichoectasia (VBD) and 1/21 a basilar artery fenestration. Signs of lacunar encephalopathy (insular, capsular and frontal subcortical lesions) were detected in 13/21 patients (62 %) and this correlated with the presence of respiratory impairment (p = 0.017). CONCLUSIONS These findings differ from what has been previously observed in healthy, aged-matched populations and confirm that cerebral arteries abnormalities, mainly involving the posterior circle, are not so rare in LOPD patients and are often accompanied by a lacunar encephalopathy that might represent a hypoxic-ischemic origin. A CTA or an MRA is recommended, in LOPD patients, for early detection of cerebrovascular malformations as they could lead to life-threatening events such as sub-arachnoid haemorrhage or brainstem compression.
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Affiliation(s)
- Federica Montagnese
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy.
| | - Francesca Granata
- Department of Radiological Sciences, University of Messina, Messina, Italy
| | - Olimpia Musumeci
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy
| | - Carmelo Rodolico
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy
| | - Stefania Mondello
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy
| | - Emanuele Barca
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy
| | - Maria Cucinotta
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy
| | - Anna Ciranni
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy
| | - Marcello Longo
- Department of Radiological Sciences, University of Messina, Messina, Italy
| | - Antonio Toscano
- Department of Clinical and Experimental Medicine, University of Messina, Messina, Italy
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14
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Miki S, Hayashi N, Masutani Y, Nomura Y, Yoshikawa T, Hanaoka S, Nemoto M, Ohtomo K. Computer-Assisted Detection of Cerebral Aneurysms in MR Angiography in a Routine Image-Reading Environment: Effects on Diagnosis by Radiologists. AJNR Am J Neuroradiol 2016; 37:1038-43. [PMID: 26892988 DOI: 10.3174/ajnr.a4671] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2015] [Accepted: 11/19/2015] [Indexed: 12/19/2022]
Abstract
BACKGROUND AND PURPOSE Experiences with computer-assisted detection of cerebral aneurysms in diagnosis by radiologists in real-life clinical environments have not been reported. The purpose of this study was to evaluate the usefulness of computer-assisted detection in a routine reading environment. MATERIALS AND METHODS During 39 months in a routine clinical practice environment, 2701 MR angiograms were each read by 2 radiologists by using a computer-assisted detection system. Initial interpretation was independently made without using the detection system, followed by a possible alteration of diagnosis after referring to the lesion candidate output from the system. We used the final consensus of the 2 radiologists as the reference standard. The sensitivity and specificity of radiologists before and after seeing the lesion candidates were evaluated by aneurysm- and patient-based analyses. RESULTS The use of the computer-assisted detection system increased the number of detected aneurysms by 9.3% (from 258 to 282). Aneurysm-based analysis revealed that the apparent sensitivity of the radiologists' diagnoses made without and with the detection system was 64% and 69%, respectively. The detection system presented 82% of the aneurysms. The detection system more frequently benefited radiologists than being detrimental. CONCLUSIONS Routine integration of computer-assisted detection with MR angiography for cerebral aneurysms is feasible, and radiologists can detect a number of additional cerebral aneurysms by using the detection system without a substantial decrease in their specificity. The low confidence of radiologists in the system may limit its usefulness.
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Affiliation(s)
- S Miki
- From the Departments of Computational Diagnostic Radiology and Preventive Medicine (S.M., N.H., Y.N., T.Y., M.N.)
| | - N Hayashi
- From the Departments of Computational Diagnostic Radiology and Preventive Medicine (S.M., N.H., Y.N., T.Y., M.N.)
| | - Y Masutani
- Faculty of Information Sciences and Graduate School of Information Sciences (Y.M.), Hiroshima City University, Hiroshima, Japan
| | - Y Nomura
- From the Departments of Computational Diagnostic Radiology and Preventive Medicine (S.M., N.H., Y.N., T.Y., M.N.)
| | - T Yoshikawa
- From the Departments of Computational Diagnostic Radiology and Preventive Medicine (S.M., N.H., Y.N., T.Y., M.N.)
| | - S Hanaoka
- Radiology (S.H., K.O.), The University of Tokyo Hospital, Tokyo, Japan
| | - M Nemoto
- From the Departments of Computational Diagnostic Radiology and Preventive Medicine (S.M., N.H., Y.N., T.Y., M.N.)
| | - K Ohtomo
- Radiology (S.H., K.O.), The University of Tokyo Hospital, Tokyo, Japan
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15
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Wattjes MP, Barkhof F. Diagnostic relevance of high field MRI in clinical neuroradiology: the advantages and challenges of driving a sports car. Eur Radiol 2012; 22:2304-6. [PMID: 22821393 PMCID: PMC3472049 DOI: 10.1007/s00330-012-2552-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2012] [Revised: 06/06/2012] [Accepted: 06/11/2012] [Indexed: 11/04/2022]
Abstract
Abstract High field MRI operating at 3 T is increasingly being used in the field of neuroradiology on the grounds that higher magnetic field strength should theoretically lead to a higher diagnostic accuracy in the diagnosis of several disease entities. This Editorial discusses the exhaustive review by Wardlaw and colleagues of research comparing 3 T MRI with 1.5 T MRI in the field of neuroradiology. Interestingly, the authors found no convincing evidence of improved image quality, diagnostic accuracy, or reduced total examination times using 3 T MRI instead of 1.5 T MRI. These findings are highly relevant since a new generation of high field MRI systems operating at 7 T has recently been introduced. Key Points • Higher magnetic field strengths do not necessarily lead to a better diagnostic accuracy. • Disadvantages of high field MR systems have to be considered in clinical practice. • Higher field strengths are needed for functional imaging, spectroscopy, etc. • Disappointingly there are few direct comparisons of 1.5 and 3 T MRI. • Whether the next high field MR generation (7 T) will improve diagnostic accuracy has to be investigated.
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Affiliation(s)
- Mike P Wattjes
- Department of Radiology, VU University Medical Center, De Boelelaan 1117, 1081 HV, Amsterdam, The Netherlands.
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