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Barman D, Dkhar MS. Purification and characterization of moderately thermostable raw-starch digesting α-amylase from endophytic Streptomyces mobaraensis DB13 associated with Costus speciosus. J GEN APPL MICROBIOL 2024; 69:293-300. [PMID: 37635076 DOI: 10.2323/jgam.2023.08.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/29/2023]
Abstract
Endophytic actinobacteria are known to produce various enzymes with potential industrial applications. Alpha-amylase is an important class of industrial enzyme with a multi-dimensional utility. The present experiment was designed to characterize a moderately thermostable α-amylase producing endophytic Streptomyces mobaraensis DB13 isolated from Costus speciosus (J. Koenig) Sm. The enzyme was purified using 60% ammonium sulphate precipitation, dialysis, and Sephadex G-100 column chromatography. Based on 12% SDS-PAGE, the molecular weight of the purified α-amylase was estimated to be 55 kDa. The maximum α-amylase activity was achieved at pH 7.0, 50°C and it retained 80% of its activity at both pH 7.0 and 8.0 after incubation for 2 h. The α-mylase activity is strongly enhanced by Ca2+, Mg2+, and inhibited by Ba2+. The activity remains stable in the presence of Tween-80, SDS, PMSF, and Triton X-100; however, β-mercaptoethanol, EDTA, and H2O2 reduced the activity. The kinetic parameters Km and Vmax values for this α-amylase were calculated as 2.53 mM and 29.42 U/mL respectively. The α-amylase had the ability to digest various raw starches at a concentration of 10 mg/mL at pH 7.0, 50°C, where maize and rice are the preferred substrates. The digestion starts after 4 h of incubation, which reaches maximum after 48 h of incubation. These results suggest that S. mobaraensis DB13 is a potential source of moderately thermostable α-amylase enzyme, that effciently hydrolyzes raw starch. It suggesting that this α-amylase is a promising candidate to be use for industrial purposes.
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Affiliation(s)
- Dina Barman
- Microbial Ecology Laboratory, Centre for Advanced Studies in Botany, Department of Botany
- Department of Microbiology, The Assam Royal Global University
| | - Mamtaj S Dkhar
- Microbial Ecology Laboratory, Centre for Advanced Studies in Botany, Department of Botany
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Setiawan A, Setiawan F, Juliasih NLGR, Widyastuti W, Laila A, Setiawan WA, Djailani FM, Mulyono M, Hendri J, Arai M. Fungicide Activity of Culture Extract from Kocuria palustris 19C38A1 against Fusarium oxysporum. J Fungi (Basel) 2022; 8:jof8030280. [PMID: 35330282 PMCID: PMC8949940 DOI: 10.3390/jof8030280] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Revised: 03/03/2022] [Accepted: 03/08/2022] [Indexed: 02/06/2023] Open
Abstract
Secondary metabolites of actinomycetes are a potential source of bioactive compounds in the agricultural sector. This study aimed to determine the fungicidal properties of extracts of marine organism-derived actinomycetes. Actinomycetes were isolated from marine organisms using agar media with 1% colloidal chitin in artificial seawater. Then, the isolates were cultured on liquid media with 1% colloidal chitin in artificial seawater under static conditions for 14 days. The culture was extracted, the fungicide properties were evaluated using the microtiter 96-well plate method, and the influence of inhibition was visualized using apotome and SEM. Finally, the active extract was analyzed using LCMSMS. In the present study, 19 actinomycetes were isolated from marine organisms, and the isolates were examined with regard to their antifungal activities. Of these nineteen isolates, the isolate 19C38A1 was picked out from the rest. Hence, it showed significant control towards F. oxysporum. The prospective strain 19C38A1 was determined to be Kocuria palustris 19C38A1. The extract 19C38A1 was shown to cause damage to cell integrity, indicated by the shrinking form, and inhibited germination in the F. oxysporum; subsequently, the chemical characteristics of the compound produced by the potential isolate 19C38A1 indicated the presence of benzimidazole compounds in the active fraction of C38BK2FA. These results indicate that actinomycetes derived from marine organisms near the coast of Oluhuta, Tomini Bay, Gorontalo, related to strain 19C38A1, are not widely known as sources of valuable fungicides. This preliminary information is important, as it can be used as a basis for further development in the search for fungicides derived from marine actinomycetes.
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Affiliation(s)
- Andi Setiawan
- Department of Chemistry, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia; (A.S.); (F.S.); (N.L.G.R.J.); (W.W.); (A.L.); (M.M.)
| | - Fendi Setiawan
- Department of Chemistry, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia; (A.S.); (F.S.); (N.L.G.R.J.); (W.W.); (A.L.); (M.M.)
| | - Ni Luh Gede Ratna Juliasih
- Department of Chemistry, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia; (A.S.); (F.S.); (N.L.G.R.J.); (W.W.); (A.L.); (M.M.)
| | - Widyastuti Widyastuti
- Department of Chemistry, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia; (A.S.); (F.S.); (N.L.G.R.J.); (W.W.); (A.L.); (M.M.)
| | - Aspita Laila
- Department of Chemistry, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia; (A.S.); (F.S.); (N.L.G.R.J.); (W.W.); (A.L.); (M.M.)
| | - Wawan A. Setiawan
- Department of Biology, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia;
| | - Fernandy M. Djailani
- Department of Fish Processing, Faculty of Fisheries and Marine Science, Gorontalo State University, Gorontalo 96128, Indonesia;
| | - Mulyono Mulyono
- Department of Chemistry, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia; (A.S.); (F.S.); (N.L.G.R.J.); (W.W.); (A.L.); (M.M.)
| | - John Hendri
- Department of Chemistry, Faculty of Mathematics and Natural Science, Lampung University, Bandar Lampung 35145, Indonesia; (A.S.); (F.S.); (N.L.G.R.J.); (W.W.); (A.L.); (M.M.)
- Correspondence: (J.H.); (M.A.); Tel.: +62-81-2792-7379 (J.H.); +81-6-6879-8215 (M.A.)
| | - Masayoshi Arai
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka 565-0871, Japan
- Correspondence: (J.H.); (M.A.); Tel.: +62-81-2792-7379 (J.H.); +81-6-6879-8215 (M.A.)
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Production and Partial Characterization of α-Amylase Enzyme from Marine Actinomycetes. BIOMED RESEARCH INTERNATIONAL 2021; 2021:5289848. [PMID: 34917683 PMCID: PMC8670945 DOI: 10.1155/2021/5289848] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 10/20/2021] [Accepted: 10/30/2021] [Indexed: 01/05/2023]
Abstract
Amylase producing actinobacteria were isolated and characterized from terrestrial environment. There are a limited number of reports investigating the marine environment; hence, in the present study, four marine enzymes were tested for their amylase production ability. On starch agar plates, the Streptomyces rochei strain showed a higher hydrolytic zone (24 mm) than the other isolates. Growth under optimized culture conditions using Plackett-Burman's experimental design led to a 1.7, 9.8, 7.7, and 3.12-fold increase for the isolates S. griseorubens, S. rochei, S. parvus, and Streptomyces sp., respectively, in the specific activity measurement. When applying the Box-Behnken design on S. rochei using the most significant parameters (starch, K2HPO4, pH, and temperature), there was a 12.22-fold increase in the specific activity measurement 7.37 U/mg. The α-amylase was partially purified, and its molecular weight was determined using sodium dodecyl sulfate-polyacrylamide gel electrophoresis. α-Amylase was particularly active at pH 6 and 65°C. The purified enzyme was most active at 65°C and pH 6, thermal stability of 70°C for 40 min, and salt concentration of 1 M with Km and Vmax of 6.58 mg/ml and 21.93 μmol/ml/min, respectively. The α-amylase was improved by adding Cu+2, Zn+2, and Fe+2 (152.21%, 207.24%, and 111.89%). Increased production of α-amylase enzyme by S. rochei KR108310 leads to production of significant industrial products.
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Solid State Fermentation of Shrimp Shell Waste Using Pseudonocardia carboxydivorans 18A13O1 to Produce Bioactive Metabolites. FERMENTATION-BASEL 2021. [DOI: 10.3390/fermentation7040247] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Marine actinomycetes are prolific microorganisms; however, knowledge of their diversity, distribution, and secondary metabolites is limited. Marine actinomycetes represent an untapped source of novel bioactive compounds. In this study, we investigated shrimp shell as substrates for model production bioactive metabolites from actinomycetes under solid state fermentation (SSF) conditions. A total of fifteen actinomycetes were isolated from six sponges and one tunicate. The isolated actinomycetes were grown on solid shrimp shells. Cultures of actinomycetes were extracted with ethyl acetate (EtOAc) and extracts were bioassayed for activity against Staphylococcus aureus. One isolate 18A13O1 from the sponge, Rhabdastrella globostellata, exhibited antibacterial activity on primary screening compared to the other samples and was chosen for further study. Visualization using SEM showed aerial and substrate mycelia. Through phylogenetic analysis, it was confirmed that isolate 18A13O1 is a Pseudonocardia carboxydivorans. Purification of an EtOAc extract yielded A13B2, which showed a minimum inhibition concentration against S. aureus at 15.6 μg/mL. It can be concluded that this basic information is very important for further studies related to the development of the production of bioactive secondary metabolites through the solid state fermentation process.
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Ousaadi MI, Merouane F, Berkani M, Almomani F, Vasseghian Y, Kitouni M. Valorization and optimization of agro-industrial orange waste for the production of enzyme by halophilic Streptomyces sp. ENVIRONMENTAL RESEARCH 2021; 201:111494. [PMID: 34171373 DOI: 10.1016/j.envres.2021.111494] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 05/31/2021] [Accepted: 05/31/2021] [Indexed: 06/13/2023]
Abstract
This study underlines the biotechnical valorization of the accumulated and unusable remains of agro-industrial orange fruit peel waste to produce α-amylase under submerged conditions by Streptomyces sp. KP314280 (20r). The response surface methodology based on central composite design (RSM-CCD) and artificial neural network coupled with a genetic algorithm (ANN-GA) were used to model and optimize the conditions for the α-amylase production. Four independent variables were evaluated for α-amylase activity including substrate concentration, inoculum size, sodium chloride powder (NaCl), and pH. A ten-fold cross-validation indicated that the ANN has a greater ability than the RSM to predict the α-amylase activity (R2ANN = 0.884 and R2RSM = 0.725). The analysis of variance indicated that the aforementioned four factors significantly affected the α-amylase activity. Additionally, the α-amylase production experiments were conducted according to the optimal conditions generated by the GA. The results indicated that the amylase yield increased by 4-fold. Moreover, the α-amylase production (12.19 U/mL) in the optimized medium was compatible with the predicted conditions outlined by the ANN-GA model (12.62 U/mL). As such, the ANN and GA combination is optimizable for α-amylase production and exhibits an accurate prediction which provides an alternative to other biological applications.
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Affiliation(s)
- Mouna Imene Ousaadi
- Laboratoire Biotechnologies, Ecole Nationale Supérieure de Biotechnologie, Ville Universitaire Ali Mendjeli, BP E66 25100, Constantine, Algeria
| | - Fateh Merouane
- Laboratoire Biotechnologies, Ecole Nationale Supérieure de Biotechnologie, Ville Universitaire Ali Mendjeli, BP E66 25100, Constantine, Algeria
| | - Mohammed Berkani
- Laboratoire Biotechnologies, Ecole Nationale Supérieure de Biotechnologie, Ville Universitaire Ali Mendjeli, BP E66 25100, Constantine, Algeria.
| | - Fares Almomani
- Department of Chemical Engineering, College of Engineering, Qatar University, P. O. Box 2713, Doha, Qatar.
| | - Yasser Vasseghian
- Department of Chemical Engineering, Quchan University of Technology, Quchan, Iran.
| | - Mahmoud Kitouni
- Laboratoire de Génie Microbiologie et Applications, Université des Frères Mentouri Constantine 1, Route Ain El Bey, 25000 Constantine, Algeria
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Production and application of glucose isomerase from Streptomyces enissocaesilis and amylase from Streptomyces sp. for the synthesis of high fructose corn syrup. SN APPLIED SCIENCES 2020. [DOI: 10.1007/s42452-020-03757-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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González V, Vargas-Straube MJ, Beys-da-Silva WO, Santi L, Valencia P, Beltrametti F, Cámara B. Enzyme Bioprospection of Marine-Derived Actinobacteria from the Chilean Coast and New Insight in the Mechanism of Keratin Degradation in Streptomyces sp. G11C. Mar Drugs 2020; 18:E537. [PMID: 33126528 PMCID: PMC7693968 DOI: 10.3390/md18110537] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 10/13/2020] [Accepted: 10/17/2020] [Indexed: 01/10/2023] Open
Abstract
Marine actinobacteria are viewed as a promising source of enzymes with potential technological applications. They contribute to the turnover of complex biopolymers, such as pectin, lignocellulose, chitin, and keratin, being able to secrete a wide variety of extracellular enzymes. Among these, keratinases are a valuable alternative for recycling keratin-rich waste, which is generated in large quantities by the poultry industry. In this work, we explored the biocatalytic potential of 75 marine-derived actinobacterial strains, focusing mainly on the search for keratinases. A major part of the strains secreted industrially important enzymes, such as proteases, lipases, cellulases, amylases, and keratinases. Among these, we identified two streptomycete strains that presented great potential for recycling keratin wastes-Streptomyces sp. CHA1 and Streptomyces sp. G11C. Substrate concentration, incubation temperature, and, to a lesser extent, inoculum size were found to be important parameters that influenced the production of keratinolytic enzymes in both strains. In addition, proteomic analysis of culture broths from Streptomyces sp. G11C on turkey feathers showed a high abundance and diversity of peptidases, belonging mainly to the serine and metallo-superfamilies. Two proteases from families S08 and M06 were highly expressed. These results contributed to elucidate the mechanism of keratin degradation mediated by streptomycetes.
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Affiliation(s)
- Valentina González
- Laboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química y Centro de Biotecnología Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Valparaíso 2340000, Chile; (V.G.); (M.J.V.-S.)
| | - María José Vargas-Straube
- Laboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química y Centro de Biotecnología Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Valparaíso 2340000, Chile; (V.G.); (M.J.V.-S.)
| | - Walter O. Beys-da-Silva
- Faculdade de Farmácia, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS 90610-000, Brazil; (W.O.B.-d.-S.); (L.S.)
| | - Lucélia Santi
- Faculdade de Farmácia, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS 90610-000, Brazil; (W.O.B.-d.-S.); (L.S.)
| | - Pedro Valencia
- Laboratorio de Biocatálisis y Procesamiento de Alimentos, Departamento de Ingeniería Química y Ambiental, Universidad Técnica Federico Santa María, Valparaíso 2340000, Chile;
| | | | - Beatriz Cámara
- Laboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química y Centro de Biotecnología Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Valparaíso 2340000, Chile; (V.G.); (M.J.V.-S.)
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Suriya J, Bharathiraja S, Krishnan M, Manivasagan P, Kim SK. Extremozymes from Marine Actinobacteria. ADVANCES IN FOOD AND NUTRITION RESEARCH 2016; 79:43-66. [PMID: 27770863 DOI: 10.1016/bs.afnr.2016.08.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Marine microorganisms that have the possibility to survive in diverse conditions such as extreme temperature, pH, pressure, and salinity are known as extremophiles. They produce biocatalysts so named as extremozymes that are active and stable at extreme conditions. These enzymes have numerous industrial applications due to its distinct properties. Till now, only a fraction of microorganisms on Earth have been exploited for screening of extremozymes. Novel techniques used for the cultivation and production of extremophiles, as well as cloning and overexpression of their genes in various expression systems, will pave the way to use these enzymes for chemical, food, pharmaceutical, and other industrial applications.
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Affiliation(s)
- J Suriya
- School of Environmental Sciences, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India
| | - S Bharathiraja
- CAS in Marine Biology, Annamalai University, Porto Novo, Tamil Nadu, India
| | - M Krishnan
- School of Environmental Sciences, Bharathidasan University, Tiruchirappalli, Tamil Nadu, India
| | - P Manivasagan
- Marine Bioprocess Research Center, Pukyong National University, Busan, Republic of Korea
| | - S-K Kim
- Marine Bioprocess Research Center; Specialized Graduate School Science & Technology Convergence, Pukyong National University, Busan, Republic of Korea.
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Sharma TK, Mawlankar R, Sonalkar VV, Shinde VK, Zhan J, Li WJ, Rele MV, Dastager SG, Kumar LS. Streptomyces lonarensis sp. nov., isolated from Lonar Lake, a meteorite salt water lake in India. Antonie van Leeuwenhoek 2015; 109:225-35. [DOI: 10.1007/s10482-015-0626-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2015] [Accepted: 11/17/2015] [Indexed: 04/19/2023]
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