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Adegoke AA, Aiyegoro OA, Kumari S. Editorial: Emerging pathogens and contaminants in water matrices: human health risks, exposure pathways and epidemiological outcomes. Front Microbiol 2023; 14:1283192. [PMID: 37799606 PMCID: PMC10548361 DOI: 10.3389/fmicb.2023.1283192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 09/07/2023] [Indexed: 10/07/2023] Open
Affiliation(s)
- Anthony A. Adegoke
- Department of Microbiology, Faculty of Science, University of Uyo, Uyo, Nigeria
- Department of Community Health Studies, Faculty of Health Sciences, Durban University of Technology, Durban, KwaZulu-Natal, South Africa
| | - Olayinka A. Aiyegoro
- Department of Microbiology, Faculty of Science, University of Uyo, Uyo, Nigeria
- Research Unit for Environmental Sciences and Management, North West University, Potchefstroom, North West, South Africa
| | - Sheena Kumari
- Institute for Water and Wastewater Technology, Durban University of Technology, Durban, KwaZulu-Natal, South Africa
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Pazra DF, Latif H, Basri C, Wibawan IWT, Rahayu P. Detection of tetracycline resistance genes and their diversity in Escherichia coli isolated from pig farm waste in Banten province, Indonesia. Vet World 2023; 16:1907-1916. [PMID: 37859956 PMCID: PMC10583874 DOI: 10.14202/vetworld.2023.1907-1916] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 08/17/2023] [Indexed: 10/21/2023] Open
Abstract
Background and Aim Livestock waste in the form of feces and liquid represents an important reservoir of antibiotic resistance genes (ARGs). Because many ARGs can be horizontally transferred to other pathogens, livestock waste plays an essential role in the emergence and transmission of various ARGs in the environment. Therefore, this study aimed to detect and assess the diversity of tet genes in Escherichia coli isolated from pig farm waste in Banten province, Indonesia. Materials and Methods Solid waste (feces) and wastewater were collected from 44 pig farms in Banten province. The isolation and identification of E. coli referred to the Global Tricycle Surveillance extended-spectrum beta-lactamase E. coli World Health Organization (2021) guidelines. tet genes were detected using quantitative real-time polymerase chain reaction after dividing pig farms in the province into four clusters based on their adjacent areas and characteristics. Results tetA, tetB, tetC, tetM, tetO, and tetX were detected in solid waste and wastewater from pig farms, whereas tetE was not detected in either sample type. tetX (100%) and tetO (75%) were the most dominant genes in solid waste, whereas wastewater samples were dominated by tetA, tetM, tetO, and tetX (prevalence of 50% each). Furthermore, eight tet gene patterns were found in pig farm waste (prevalence of 12.5% each). Conclusion The results showed a high prevalence of tetO and tetX in solid waste and wastewater from pig farms in Banten province. This significant prevalence and diversity indicated the transmission of tet genes from pigs to the environment, posing a serious threat to public health.
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Affiliation(s)
- Debby Fadhilah Pazra
- Animal Biomedical Science Study Program, School of Veterinary Medicine and Biomedical Sciences (SVMBS), IPB University, Bogor, Indonesia
- Bogor Agricultural Development Polytechnic, Bogor, Indonesia
| | - Hadri Latif
- Division of Veterinary Public Health and Epidemiology, School of Veterinary Medicine and Biomedical Sciences (SVMBS), IPB University, Bogor, Indonesia
| | - Chaerul Basri
- Division of Veterinary Public Health and Epidemiology, School of Veterinary Medicine and Biomedical Sciences (SVMBS), IPB University, Bogor, Indonesia
| | - I. Wayan Teguh Wibawan
- Division of Medical Microbiology, School of Veterinary Medicine and Biomedical Sciences (SVMBS), IPB University, Bogor, Indonesia
| | - Puji Rahayu
- Quality Control Laboratory and Certification of Animal Products, Bogor, Indonesia
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Zhang S, Liang R, Du L. Prevalence of Antibiotic Resistance Genes, Heavy Metal Resistance Genes and the Class 1 Integron Gene in Well Water and Tap Water Samples from Four Cities in Henan Province, China. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2021; 106:700-706. [PMID: 33630099 DOI: 10.1007/s00128-021-03144-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Accepted: 02/05/2021] [Indexed: 06/12/2023]
Abstract
The presence of multi-resistance to both antibiotics and heavy metals in drinking water poses a significant risk to human health. Herein, we utilized qPCR to assess patterns of antibiotic resistance genes (ARGs), heavy metal resistance genes (HMRGs), and class 1 integron (intI1) gene expression levels in well and tap water samples from four cities in Henan Province, China. The relative abundance of most index values was higher in well water relative to tap water, or was highest in Shangqiu City and lowest in Puyang City on average. The expression of ARG was closely correlated with that of intI1 and HMRG in both well and tap water. Overall, our data highlighted the health threat posed by ARGs in the drinking water supply and underscore the potential for the transfer of these genes between bacteria with the aid of intI1 under selective pressure associated with human activity and heavy metal stress.
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Affiliation(s)
- Shuhong Zhang
- College of Biology and Food, Shangqiu Normal University, Shangqiu, 476000, China.
| | - Ruirui Liang
- College of Biology and Food, Shangqiu Normal University, Shangqiu, 476000, China
| | - Linnan Du
- College of Biology and Food, Shangqiu Normal University, Shangqiu, 476000, China
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Sun J, Jin L, He T, Wei Z, Liu X, Zhu L, Li X. Antibiotic resistance genes (ARGs) in agricultural soils from the Yangtze River Delta, China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 740:140001. [PMID: 32569910 DOI: 10.1016/j.scitotenv.2020.140001] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2020] [Revised: 05/28/2020] [Accepted: 06/03/2020] [Indexed: 05/23/2023]
Abstract
As an important reservoir of intrinsic antimicrobial resistance, soil is subjected to increasing anthropogenic activities that creates sustained selection pressure for the prevalence of antibiotic resistance genes (ARGs), thus constituting an important environmental dissemination pathway to human exposure. This study investigated the levels and spatial distributions of three classes of ARGs in relation to a range of co-occurring chemical mixtures and soil properties at a regional scale of the Yangtze River Delta (YRD), China. The selected eight ARGs were all detected in 241 agricultural soil samples with relative abundances ranging from 1.01 × 10-7 to 2.31 × 10-1 normalized to the 16S rRNA gene. The sulII and tetG were the dominant ARGs with a mean relative abundance of 6.67 × 10-3 and 5.25 × 10-3, respectively. The ARGs were mainly present in agricultural soils alongside Taihu Lake and Shanghai municipality, the most agriculturally and economically vibrant area of the YRD region. Antibiotics, rather than other co-occurring pollutants and soil properties, remain to be the dominant correlate to the ARGs, suggesting their co-introduction into the soils via irrigation and manure application or the sustained selection pressure of antibiotics from these sources for the proliferation of ARGs in the soils. While the current dataset provided useful information to assess the ARGs pollution for mitigation, future studies are warranted to reveal the complete picture on the potential transfer of antimicrobial resistance from soil to agricultural produces to human consumption and associated health implications.
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Affiliation(s)
- Jianteng Sun
- Guangdong Provincial Key Laboratory of Petrochemical Pollution Processes and Control, School of Environmental Science and Engineering, Guangdong University of Petrochemical Technology, Maoming, Guangdong 525000, China; Department of Environmental Science, Zhejiang University, Hangzhou, Zhejiang 310058, China; Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong
| | - Ling Jin
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong
| | - Tangtian He
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong
| | - Zi Wei
- Guangdong Provincial Key Laboratory of Petrochemical Pollution Processes and Control, School of Environmental Science and Engineering, Guangdong University of Petrochemical Technology, Maoming, Guangdong 525000, China
| | - Xinyi Liu
- Guangdong Provincial Key Laboratory of Petrochemical Pollution Processes and Control, School of Environmental Science and Engineering, Guangdong University of Petrochemical Technology, Maoming, Guangdong 525000, China
| | - Lizhong Zhu
- Department of Environmental Science, Zhejiang University, Hangzhou, Zhejiang 310058, China.
| | - Xiangdong Li
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong.
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Larouche É, Généreux M, Tremblay MÈ, Rhouma M, Gasser MO, Quessy S, Côté C. Impact of liquid hog manure applications on antibiotic resistance genes concentration in soil and drainage water in field crops. Can J Microbiol 2020; 66:549-561. [PMID: 32330390 DOI: 10.1139/cjm-2019-0343] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Agricultural practices such as manure applications could contribute to the spread of antibiotic resistance genes (ARGs) within the environment. Our objective was to assess the impact of certain fertilization methods (mineral or manure) and tillage practices (reduced or conventional) on the presence of ARGs and bacteria in soil and drainage water under wheat and grain corn crops. Targeted ARGs tet(T), sul1, and blaCTX-M-1 in liquid hog manure, soil, and water samples were quantified by qPCR. Conventional PCR was used to detect mcr-1 and mcr-2. ARGs in control plots were detected despite the absence of manure, representing an environmental reservoir of resistant microorganisms. The manure application rate higher than 39 m3/ha increased tet(T) and sul1 gene concentrations in soil for more than 180 days. Tillage practices had no impact on ARG concentrations in soil and water samples. The blaCTX-M-1 gene was only detected in seven water samples in 2016, but no link was established with the treatments. The mcr-1 and mcr-2 genes were not detected in all tested samples. This study demonstrated that tet(T) and sul1 gene concentrations increased in soil after liquid hog manure application as well as in drainage water in the next weeks.
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Affiliation(s)
- Élodie Larouche
- Research and Development Institute for the Agri-environment, 335 Vingt-Cinq East Road, Saint-Bruno-de-Montarville, QC J3V 0G7, Canada
| | - Mylène Généreux
- Research and Development Institute for the Agri-environment, 335 Vingt-Cinq East Road, Saint-Bruno-de-Montarville, QC J3V 0G7, Canada
| | - Marie-Ève Tremblay
- Research and Development Institute for the Agri-environment, 2700 Einstein Street, QC G1P 3W8, Canada
| | - Mohamed Rhouma
- Department of Pathology and Microbiology, Faculty of Veterinary Medicine, University of Montreal, 3200 Sicotte Street, Saint-Hyacinthe, QC J2S 2M2, Canada
| | - Marc-Olivier Gasser
- Research and Development Institute for the Agri-environment, 2700 Einstein Street, QC G1P 3W8, Canada
| | - Sylvain Quessy
- Department of Pathology and Microbiology, Faculty of Veterinary Medicine, University of Montreal, 3200 Sicotte Street, Saint-Hyacinthe, QC J2S 2M2, Canada
| | - Caroline Côté
- Research and Development Institute for the Agri-environment, 335 Vingt-Cinq East Road, Saint-Bruno-de-Montarville, QC J3V 0G7, Canada
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Toxic Effects of Single Antibiotics and Antibiotics in Combination on Germination and Growth of Sinapis alba L. PLANTS 2020; 9:plants9010107. [PMID: 31952171 PMCID: PMC7020151 DOI: 10.3390/plants9010107] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Revised: 12/26/2019] [Accepted: 01/13/2020] [Indexed: 12/14/2022]
Abstract
Antibiotics enter agro-ecosystems via the application of farmyard manure, sewage sludge, animal by-products, or digestates. There are many open questions regarding the behavior of such compounds in the soil like their adsorption, degradation, half-life, and their effects on soil organisms and plants. The impact of antibiotics on the development of antibiotic resistance genes in the environment is regarded as the most important effect that endangers the environment as well as human health. Nevertheless, direct plant toxicity, especially of different antibiotics and heavy metals at the same time, can be of importance as well. In the current study, commercially available phytotoxkits were tested with regard to the toxicity of single antibiotics and antibiotics in combination with the root growth of Sinapis alba L. Additionally, a pot trial was conducted to study the transfer of the observed phytotoxkits results in more complex systems. The phytotoxkits revealed direct toxicity of antibiotics on root development only at high concentrations. The highest toxicity was determined for sulfadiazine, followed by tetracycline and enrofloxacin, showing the least toxicity. When two antibiotics were tested at the same time in the phytotoxkit, synergistic effects were detected. The pot trial indicated lower effect concentrations for enrofloxacin than determined in the phytotoxkit and, therefore, to higher toxicity on plant growth.
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Golub N, Shynkarchuk M, Shynkarchuk A, Xinhua S, Ying Z, Kozlovets O. Vulnerabilities in the Production of Biogas from the Fat-Containing Tannery Waste. INNOVATIVE BIOSYSTEMS AND BIOENGINEERING 2019. [DOI: 10.20535/ibb.2019.3.4.185425] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022] Open
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Amador P, Fernandes R, Prudêncio C, Duarte I. Prevalence of Antibiotic Resistance Genes in Multidrug-Resistant Enterobacteriaceae on Portuguese Livestock Manure. Antibiotics (Basel) 2019; 8:E23. [PMID: 30871244 PMCID: PMC6466527 DOI: 10.3390/antibiotics8010023] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2019] [Revised: 02/22/2019] [Accepted: 02/23/2019] [Indexed: 01/03/2023] Open
Abstract
The exposure of both crop fields and humans to antibiotic-resistant bacteria in animal excreta is an emergent concern of the One Health initiative. This study assessed the contamination of livestock manure from poultry, pig, dairy farms and slaughterhouses in Portugal with resistance determinants. The resistance profiles of 331 Enterobacteriaceae isolates to eight β-lactam (amoxicillin, cefoxitin, cefotaxime, cefpirome, aztreonam, ceftazidime, imipenem and meropenem) and to five non-β-lactam antibiotics (tetracycline (TET), trimethoprim/sulfamethoxazole (SXT), ciprofloxacin (CIP), chloramphenicol (CHL) and gentamicin) was investigated. Forty-nine integron and non-β-lactam resistance genes were also screened for. Rates of resistance to the 13 antibiotics ranged from 80.8% to 0.6%. Multidrug resistance (MDR) rates were highest in pig farm samples (79%). Thirty different integron and resistance genes were identified. These were mainly associated with resistance to CHL (catI and catII), CIP (mainly, qnrS, qnrB and oqx), TET (mainly tet(A) and tet(M)) and SXT (mostly dfrIa group and sul3). In MDR isolates, integron presence and non-β-lactam resistance to TET, SXT and CHL were positively correlated. Overall, a high prevalence of MDR Enterobacteriaceae was found in livestock manure. The high gene diversity for antibiotic resistance identified in this study highlights the risk of MDR spread within the environment through manure use.
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Affiliation(s)
- Paula Amador
- Environment Department, Research Centre for Natural Resources, Environment and Society (CERNAS), College of Agriculture, Polytechnic of Coimbra, 3045-601 Coimbra, Portugal.
| | - Ruben Fernandes
- Department Chemical Sciences and Biomolecules, School Allied Health Sciences, Polytechnic of Porto, 4200-072 Porto, Portugal.
| | - Cristina Prudêncio
- Department Chemical Sciences and Biomolecules, School Allied Health Sciences, Polytechnic of Porto, 4200-072 Porto, Portugal.
| | - Isabel Duarte
- Environment Department, Research Centre for Natural Resources, Environment and Society (CERNAS), College of Agriculture, Polytechnic of Coimbra, 3045-601 Coimbra, Portugal.
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Hurst JJ, Oliver JP, Schueler J, Gooch C, Lansing S, Crossette E, Wigginton K, Raskin L, Aga DS, Sassoubre LM. Trends in Antimicrobial Resistance Genes in Manure Blend Pits and Long-Term Storage Across Dairy Farms with Comparisons to Antimicrobial Usage and Residual Concentrations. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2019; 53:2405-2415. [PMID: 30707579 DOI: 10.1021/acs.est.8b05702] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The use of antimicrobials by the livestock industry can lead to the release of unmetabolized antimicrobials and antimicrobial resistance genes (ARG) into the environment. However, the relationship between antimicrobial use, residual antimicrobials, and ARG prevalence within manure is not well understood, specifically across temporal and location-based scales. The current study determined ARG abundance in untreated manure blend pits and long-term storage systems from 11 conventional and one antimicrobial-free dairy farms in the Northeastern U.S. at six times over one-year. Thirteen ARGs corresponding to resistance mechanisms for tetracyclines, macrolides-lincosamides, sulfonamides, aminoglycosides, and β-lactams were quantified using a Custom qPCR Array or targeted qPCR. ARG abundance differed between locations, suggesting farm specific microbial resistomes. ARG abundance also varied temporally. Manure collected during the winter contained lower ARG abundances. Overall, normalized ARG concentrations did not correlate to average antimicrobial usage or tetracycline concentrations across farms and collection dates. Of the 13 ARGs analyzed, only four genes showed a higher abundance in samples from conventional farms and eight ARGs exhibited similar normalized concentrations in the conventional and antimicrobial-free farm samples. No clear trends were observed in ARG abundance between dairy manure obtained from blend pits and long-term storage collected during two drawdown periods (fall and spring), although higher ARG abundances were generally observed in spring compared to fall. This comprehensive study informs future studies needed to determine the contributions of ARGs from dairy manure to the environment.
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Affiliation(s)
- Jerod J Hurst
- Department of Chemistry , University at Buffalo, The State University of New York (SUNY) , Buffalo , New York 14260 , United States
| | - Jason P Oliver
- Department of Animal Sciences , Cornell University , Ithaca , New York 14850 , United States
| | - Jenna Schueler
- Department of Environmental Science & Technology , University of Maryland , College Park , Maryland 20742 , United States
| | - Curt Gooch
- Department of Animal Sciences , Cornell University , Ithaca , New York 14850 , United States
| | - Stephanie Lansing
- Department of Environmental Science & Technology , University of Maryland , College Park , Maryland 20742 , United States
| | - Emily Crossette
- Department of Civil and Environmental Engineering , University of Michigan , Ann Arbor , Michigan 48109 , United States
| | - Krista Wigginton
- Department of Civil and Environmental Engineering , University of Michigan , Ann Arbor , Michigan 48109 , United States
| | - Lutgarde Raskin
- Department of Civil and Environmental Engineering , University of Michigan , Ann Arbor , Michigan 48109 , United States
| | - Diana S Aga
- Department of Chemistry , University at Buffalo, The State University of New York (SUNY) , Buffalo , New York 14260 , United States
| | - Lauren M Sassoubre
- Department of Civil, Structural, and Environmental Engineering , University at Buffalo, The State University of New York (SUNY) , Buffalo , New York 14260 , United States
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Ohore OE, Addo FG, Zhang S, Han N, Anim-Larbi K. Distribution and relationship between antimicrobial resistance genes and heavy metals in surface sediments of Taihu Lake, China. J Environ Sci (China) 2019; 77:323-335. [PMID: 30573097 DOI: 10.1016/j.jes.2018.09.004] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2018] [Revised: 09/10/2018] [Accepted: 09/11/2018] [Indexed: 05/17/2023]
Abstract
Heavy metals, pharmaceuticals, and other wastes released into the environment can significantly influence environmental antibiotic resistance. We investigated the occurrence of 22 antimicrobial resistance genes (ARGs) and 10 heavy metal concentrations, and the relationship between ARGs and heavy metals in surface sediment from seven sites of Lake Taihu. The results showed significant correlations (p < 0.05) between sediment ARG levels, especially for tetracycline and sulfonamides (e.g., tet(A), tet(D), tet(E), tet(O), sul1, sul2 and int-1) and specific heavy metals (Fe, Mn, Cr, Cu, Zn, among others) in the Lake. In the surface sediments, heavy metals showed an interaction with resistance genes, but the strength of interaction was diminished with increasing depth. For most of the heavy metals, the concentration of elements in the top sediments was higher than that in other depths. Tetracycline resistance genes (tet(A), tet(B), tet(D), tet(E) and tet(O), β-lactam resistance genes (SHV, TEM, CTX, OXA and OXY) and sulfonamide resistance genes (sulA, sul1, sul2, sul3 and int-1) were detected. They showed a trend which inferred a statistically significant increase followed by decreases in the relative abundance of these ARGs (normalized to 16S rRNA genes) with increasing depth. This study revealed that tet(A), tet(O), TEM, OXY, int-1, sul1 and sul3 were widespread in surface sediments with high abundance, indicating that these genes deserve more attention in future work.
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Affiliation(s)
- Okugbe E Ohore
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, College of Environment, Hohai University, Nanjing 210098, China..
| | - Felix Gyawu Addo
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, College of Environment, Hohai University, Nanjing 210098, China
| | - Songhe Zhang
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, College of Environment, Hohai University, Nanjing 210098, China..
| | - Nini Han
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, College of Environment, Hohai University, Nanjing 210098, China
| | - Kwaku Anim-Larbi
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, College of Environment, Hohai University, Nanjing 210098, China
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Liu Z, Klümper U, Shi L, Ye L, Li M. From Pig Breeding Environment to Subsequently Produced Pork: Comparative Analysis of Antibiotic Resistance Genes and Bacterial Community Composition. Front Microbiol 2019; 10:43. [PMID: 30761096 PMCID: PMC6361818 DOI: 10.3389/fmicb.2019.00043] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2018] [Accepted: 01/11/2019] [Indexed: 11/13/2022] Open
Abstract
It is well verified that pig farms are an important reservoir and supplier of antibiotic resistance genes (ARGs). However, little is known about the transmission of ARGs between the breeding environment and subsequently produced pork. This study was conducted to investigate if ARGs and associated host bacteria spread from the breeding environment onto the meat through the food production chain. We thus analyzed the occurrence and abundance of ARGs, as well as comparing both ARG and bacterial community compositions in farm soil, pig feces and pork samples from a large-scale pig farm located in Xiamen, People's Republic of China. Among the 26 target ARGs, genes conferring resistance to sulfonamide, trimethoprim, aminoglycoside, chloramphenicol, macrolide, florfenicol, and tetracycline were observed at high frequency in both the pig breeding environment and pork. The prevalence of ARGs in pork was surprisingly consistent with breeding environments, especially between the pork and feces. The relative abundance of 10 representative ARGs conferring resistance to six classes of antibiotics ranged from 3.01 × 10-1 to 1.55 × 10-6 copies/16S rRNA copies. The ARGs conferring resistance to sulfanilamide (sulI and sulII), aminoglycoside (aadA), and tetracycline [tet(A) and tet(M)] were most highly abundant across most samples. Samples from feces and meat possessed a higher similarity in ARG compositions than samples from the farms soil. Enterobacteriaceae found on the meat samples were further identical with previously isolated multidrug-resistant bacteria from the same pig farm. Our results strongly indicate that ARGs can be potentially spreading from pig breeding environment to meat via the pork industry chain, such as feed supply, pig feeding and pork production.
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Affiliation(s)
- Zongbao Liu
- Institute for Advanced Study, Shenzhen University, Shenzhen, China
- Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen, China
| | - Uli Klümper
- ESI and CEC, Biosciences, University of Exeter, Cornwall, United Kingdom
- European Centre for Environment and Human Health, University of Exeter, Truro, United Kingdom
| | - Lei Shi
- Institute of Food Safety and Nutrition, Jinan University, Guangzhou, China
| | - Lei Ye
- Institute of Food Safety and Nutrition, Jinan University, Guangzhou, China
| | - Meng Li
- Institute for Advanced Study, Shenzhen University, Shenzhen, China
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Adegoke AA, Amoah ID, Stenström TA, Verbyla ME, Mihelcic JR. Epidemiological Evidence and Health Risks Associated With Agricultural Reuse of Partially Treated and Untreated Wastewater: A Review. Front Public Health 2018; 6:337. [PMID: 30574474 PMCID: PMC6292135 DOI: 10.3389/fpubh.2018.00337] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Accepted: 11/01/2018] [Indexed: 01/25/2023] Open
Abstract
The use of partially treated and untreated wastewater for irrigation is beneficial in agriculture but may be associated with human health risks. Reports from different locations globally have linked microbial outbreaks with agricultural reuse of wastewater. This article reviews the epidemiological evidence and health risks associated with this practice, aiming toward evidence-based conclusions. Exposure pathways that were addressed in this review included those relevant to agricultural workers and their families, consumers of crops, and residents close to areas irrigated with wastewater (partially treated or untreated). A meta-analysis gave an overall odds ratio of 1.65 (95% CI: 1.31, 2.06) for diarrheal disease and 5.49 (95% CI: 2.49, 12.10) for helminth infections for exposed agricultural workers and family members. The risks were higher among children and immunocompromised individuals than in immunocompetent adults. Predominantly skin and intestinal infections were prevalent among individuals infected mainly via occupational exposure and ingestion. Food-borne outbreaks as a result of crops (fruits and vegetables) irrigated with partially or untreated wastewater have been widely reported. Contamination of crops with enteric viruses, fecal coliforms, and bacterial pathogens, parasites including soil-transmitted helminthes (STHs), as well as occurrence of antibiotic residues and antibiotic resistance genes (ARGs) have also been evidenced. The antibiotic residues and ARGs may get internalized in crops along with pathogens and may select for antibiotic resistance, exert ecotoxicity, and lead to bioaccumulation in aquatic organisms with high risk quotient (RQ). Appropriate mitigation lies in adhering to existing guidelines such as the World Health Organization wastewater reuse guidelines and to Sanitation Safety Plans (SSPs). Additionally, improvement in hygiene practices will also provide measures against adverse health impacts.
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Affiliation(s)
- Anthony A. Adegoke
- SARChI, Institute for Water and Wastewater Technology, Durban University of Technology, Durban, South Africa
- Department of Microbiology, Faculty of Science, University of Uyo, Uyo, Nigeria
| | - Isaac D. Amoah
- SARChI, Institute for Water and Wastewater Technology, Durban University of Technology, Durban, South Africa
| | - Thor A. Stenström
- SARChI, Institute for Water and Wastewater Technology, Durban University of Technology, Durban, South Africa
| | - Matthew E. Verbyla
- Department of Civil, Construction, and Environmental Engineering, San Diego State University, San Diego, CA, United States
| | - James R. Mihelcic
- Department of Civil & Environmental Engineering, University of South Florida, Tampa, FL, United States
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