Significance of in situ quantitative membrane property-morphology relation (QmPMR) analysis

Deformation of the cell membrane is well understood from the viewpoint of protein interactions and free energy balance. However, the various dynamic properties of the membrane, such as lipid packing and hydrophobicity, and their relationship with cell membrane deformation are unknown. Therefore, the deformation of 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) and oleic acid (OA) giant unilamellar vesicles (GUVs) was induced by heating and cooling cycles, and time-lapse analysis was conducted based on the membrane hydrophobicity and physical parameters of "single-parent" and "daughter" vesicles. Fluorescence ratiometric analysis by simultaneous dual-wavelength detection revealed the variation of different hydrophilic GUVs and enabled inferences of the "daughter" vesicle composition and the "parent" membrane's local composition during deformation; the "daughter" vesicle composition of OA was lower than that of the "parents", and lateral movement of OA was the primary contributor to the formation of the "daughter" vesicles. Thus, our findings and the newly developed methodology, named in situ quantitative membrane property-morphology relation (QmPMR) analysis, would provide new insights into cell deformation and accelerate research on both deformation and its related events, such as budding and birthing.

17O Solid-State NMR Spectroscopy of Lipid Membranes

Despite the limitations posed by poor sensitivity, studies have reported the unique advantages of 17O based NMR spectroscopy to study systems existing in liquid, solid, or semisolid states. 17O NMR studies have exploited the remarkable sensitivity of quadrupole coupling and chemical shift anisotropy tensors to the local environment in the characterization of a variety of intra- and intermolecular interactions and motion. Recent studies have considerably expanded the use of 17O NMR to study dynamic intermolecular interactions associated with some of the challenging biological systems under magic angle spinning (MAS) and aligned conditions. The very fast relaxing nature of 17O has been well utilized in cellular and in vivo MRS (magnetic resonance spectroscopy) and MRI (magnetic resonance imaging) applications. The main focus of this Review is to highlight the new developments in the biological solids with a detailed discussion for a few selected examples including membrane proteins and nanodiscs. In addition to the unique benefits and limitations, the remaining challenges to overcome, and the impacts of higher magnetic fields and sensitivity enhancement techniques are discussed.

Study of the Membrane Activity of the Synthetic Peptide ∆M3 Against Extended-Spectrum β-lactamase Escherichia coli Isolates

Escherichia coli is the most common microorganism causing nosocomial or community-acquired bacteremia, and extended-spectrum β-lactamase-producing Escherichia coli isolates are identified worldwide with increasing frequency. For this reason, it is necessary to evaluate potential new molecules like antimicrobial peptides. They are recognized for their biological potential which makes them promising candidates in the fight against infections. The goal of this research was to evaluate the potential of the synthetic peptide ΔM3 on several extended-spectrum β-lactamase producing E. coli isolates. The antimicrobial and cytotoxic activity of the peptide was spectrophotometrically determined. Additionally, the capacity of the peptide to interact with the bacterial membrane was monitored by fluorescence microscopy and infrared spectroscopy. The results demonstrated that the synthetic peptide is active against Escherichia coli isolates at concentrations similar to Meropenem. On the other hand, no cytotoxic effect was observed in HaCaT keratinocyte cells even at 10 times the minimal inhibitory concentration. Microscopy results showed a permeabilizing effect of the peptide on the bacteria. The infrared results showed that ΔM3 showed affinity for the lipids of the microorganism's membrane. The results suggest that the ∆M3 interacts with the negatively charged lipids from the E. coli by a disturbing effect on membrane. Finally, the secondary structure experiments of the peptide showed a random structure in solution that did not change during the interaction with the membranes.

Role of tungsten disulfide quantum dots in specific protein-protein interactions at air-water interface

The intriguing network of antibody-antigen (Ab-Ag) interactions is highly governed by environmental perturbations and the nature of biomolecular interaction. Protein-protein interactions (PPIs) have potential applications in developing protein-adsorption-based sensors and nano-scale materials. Therefore, characterizing PPIs in the presence of a nanomaterial at the molecular level becomes imperative. The present work involves the investigation of antiferritin-ferritin (Ab-Ag) protein interactions under the influence of tungsten disulfide quantum dots (WS2 QDs). Isothermal calorimetry and contact angle measurements validated the strong influence of WS2 QDs on Ab-Ag interactions. The interfacial signatures of nano-bio-interactions were evaluated using sum frequency generation vibration spectroscopy (SFG-VS) at the air-water interface. Our SFG results reveal a variation in the tilt angle of methyl groups by ∼12° ± 2° for the Ab-Ag system in the presence of WS2 QDs. The results illustrated an enhanced ordering of water molecules in the presence of QDs, which underpins the active role of interfacial water molecules during nano-bio-interactions. We have also witnessed a differential impact of QDs on Ab-Ag by raising the concentration of the Ab-Ag combination, which showcased an increased inter-molecular interaction among the Ab and Ag molecules and a minimal influence on the methyl tilt angle. These findings suggest the formation of stronger and ordered Ab-Ag complexes upon introducing WS2 QDs in the aqueous medium and signify the potentiality of WS2 QDs relevant to protein-based sensing assays.

Radiation‐Induced Admicellar Graft Polymerization of 2‐Hydroxyethyl Methacrylate onto Polyvinylidene Fluoride Membranes Using an Electron Beam Accelerator

The efficiency of admicellar graft polymerization in functionalizing polyvinylidene fluoride (PVDF) membranes was explored. The effect of 2‐hydroxyethyl methacrylate (HEMA) concentration and the absorbed dose was investigated using a simultaneous method of radiation‐induced graft polymerization. The degree of grafting increased with raising the absorbed dose and HEMA concentration. The Fourier transform infrared (FTIR) peak for C–O stretch and the asymmetric and symmetric stretching of the C–O–C bridge, respectively, proved the presence of poly(2‐hydroxyethyl methacrylate) (PHEMA) on the modified PVDF. As the grafting yield increased, rougher surfaces were observed. According to contact angle analysis, the grafted membrane with a higher grafting yield outperformed the low grafting yield membrane in terms of water flux and hydrophilicity.

Synergistic Effect of Chitosan and Metal Oxide Additives on Improving the Organic and Biofouling Resistance of Polyethersulfone Ultrafiltration Membranes

The combination of chitosan and metal oxides was utilized as an addition to improve the fouling resistance of polyethersulfone (PES) ultrafiltration membranes. Pure water flux, membrane hydrophilicity by the contact angle, scanning electron micrographs, and Fourier-transform infrared spectra were used to characterize the membranes. With the addition of metal oxides, the modified membrane's water flux increased. The PES membrane with 0.25% wt chitosan and 2.0% wt AgNO₃ had the highest flux and antibacterial activity among the membranes tested. Because of its potential to improve membrane hydrophilicity, the water flux increased with the addition of chitosan and AgNO₃. Because of the improved hydrophilicity, the contact angle reduced as chitosan and Ag loading was increased. The PES-chitosan-Ag₂O (from AgNO₃ 2.0% wt) membrane had high antibacterial activity against Escherichia coli and Staphylococcus aureus, whereas the PES-2.0% wt Ag membrane did not show the same result. Finally, the addition of chitosan in the PES-Ag membrane increased the membrane's antibacterial activity substantially.

Revealed Properties of Various Self-Assemblies in Two Catanionic Surfactant Systems in Relation to Their Polarity and Molecular Packing State

A catanionic surfactant system is an aqueous solution or dispersion of cationic and anionic surfactants that spontaneously self-assemble into structures such as micelles, vesicles, and coacervates. Their structural diversity varies depending on the ratios of cationic and anionic surfactants (compositions), the chemical structure of the constituent molecules, etc. Herein, two types of catanionic surfactant systems were systematically characterized: (i) cetyltrimethylammonium bromide (CTAB) and sodium dodecyl sulfate (SDS), both typical ionic surfactants; and (ii) dodecylmethylimidazolium ammonium bromide ([C₁₂mim]Br) and SDS, where the former is an ionic liquid. By observing the sample appearance, turbidity, and particle size, the phase state of each system was analyzed according to the total concentration of surfactants and the molar ratio of cationic surfactants to the total concentration. Especially, for specific compositions of catanionic surfactant vesicles (cataniosome), the closed structure of the vesicles was confirmed through calcein entrapment and release detected with a fluorescence assay. The polarities of the interface of the prepared self-assemblies were evaluated using a fluorescence probe, Laurdan. The packing state of the molecules in the formed self-assembly structure was estimated using Raman spectroscopy. The results clearly indicate consistent phase-transition behavior for the CTAB-SDS (i) and [C₁₂mim]Br-SDS (ii) systems, depending on the total surfactant concentration and composition, while the membrane properties of the two systems differed. The cataniosome formed in the CTAB-SDS system was in a tightly packed membrane state and more hydrophobic than that formed in the [C₁₂mim]Br-SDS system owing to the difference in the structure of the constituting molecule: [C₁₂mim]Br has a larger head group and shorter acyl chain than CTAB. The self-assembly properties evaluated in this study were compared with those of typical lipid membranes, liposomes (lipid vesicles), to determine a possible application of the catanionic systems with various self-assembly formulations.

Surprising Rigidity of Functionally Important Water Molecules Buried in the Lipid Headgroup Region

Understanding water dynamics and structure is an important topic in biological systems. It is generally held in the literature that the interfacial water of hydrated phospholipids is highly mobile, in fast exchange with the bulk water ranging from the nano- to femtosecond timescale. Although nuclear magnetic resonance (NMR) is a powerful tool for structural and dynamic studies, direct probing of interfacial water in hydrated phospholipids is formidably challenging due to the extreme population difference between bulk and interfacial water. We developed a novel ¹⁷O solid-state NMR technique in combination with an ultra-high-field magnet (35.2 T) to directly probe the functionally important interfacial water. By selectively suppressing the dominant bulk water signal, we observed two distinct water species in the headgroup region of hydrated dimyristoylphosphatidylcholine (DMPC) lipid bilayers for the first time. One water species denoted as "confined water" is chemically and dynamically different from the bulk water (∼0.17 ppm downfield and a slightly shorter spin-lattice relaxation time). Another water species denoted as "bound water" has severely restricted motion and a distinct chemical shift (∼12 ppm upfield). Additionally, the bulk water is not as "free" as pure water, resulting from the fast exchange with the water molecules that weakly and transiently interact with the lipid choline groups. These new discoveries clearly indicate the existence of the interfacial water molecules that are relatively stable over the NMR timescale (on the order of milliseconds), providing an opportunity to characterize water dynamics on the millisecond or slower timescale in biomacromolecules.

Hydration Dynamics in Biological Membranes: Emerging Applications of Terahertz Spectroscopy

Water drives the spontaneous self-assembly of lipids and proteins into quasi two-dimensional biological membranes that act as catalytic scaffolds for numerous processes central to life. However, the functional relevance of hydration in membrane biology is only beginning to be addressed, predominantly because of challenges associated with direct measurements of hydration microstructure and dynamics in a biological milieu. Our recent work on the novel interplay of membrane electrostatics and crowding in shaping membrane hydration dynamics utilizing terahertz (THz) spectroscopy represents an important step in this context. In this Perspective, we provide a glimpse into the ever-broadening functional landscape of hydration dynamics in biological membranes in the backdrop of the unique physical chemistry of water molecules. We further highlight the immense (and largely untapped) potential of the THz toolbox in addressing contemporary problems in membrane biology, while emphasizing the adaptability of the analytical framework reported recently by us to such studies.

Effect of TMAO on the Structure and Phase Transition of Lipid Membranes: Potential Role of TMAO in Stabilizing Cell Membranes under Osmotic Stress

Extremophiles adopt strategies to deal with different environmental stresses, some of which are severely damaging to their cell membrane. To combat high osmotic stress, deep-sea organisms synthesize osmolytes, small polar organic molecules, like trimethylamine-N-oxide (TMAO), and incorporate them in the cell. TMAO is known to protect cells from high osmotic or hydrostatic pressure. Several experimental and simulation studies have revealed the roles of such osmolytes on stabilizing proteins. In contrast, the effect of osmolytes on the lipid membrane is poorly understood and broadly debated. A recent experiment has found strong evidence of the possible role of TMAO in stabilizing lipid membranes. Using the molecular dynamics (MD) simulation technique, we have demonstrated the effect of TMAO on two saturated fully hydrated lipid membranes in their fluid and gel phases. We have captured the impact of TMAO's concentration on the membrane's structural properties along with the fluid/gel phase transition temperatures. On increasing the concentration of TMAO, we see a substantial increase in the packing density of the membrane (estimated by area, thickness, and volume) and enhancement in the orientational order of lipid molecules. Having repulsive interaction with the lipid head group, the TMAO molecules are expelled away from the membrane surface, which induces dehydration of the lipid head groups, increasing the packing density. The addition of TMAO also increases the fluid/gel phase transition temperature of the membrane. All of these results are in close agreement with the experimental observations. This study, therefore, provides a molecular-level understanding of how TMAO can influence the cell membrane of deep-sea organisms and help in combating the osmotic stress condition.

Naked Bacterium: Emerging Properties of a Surfome-Streamlined Pseudomonas putida Strain

Environmental bacteria are most often endowed with native surface-attachment programs that frequently conflict with efforts to engineer biofilms and synthetic communities with given tridimensional architectures. In this work, we report the editing of the genome of Pseudomonas putida KT2440 for stripping the cells of most outer-facing structures of the bacterial envelope that mediate motion, binding to surfaces, and biofilm formation. To this end, 23 segments of the P. putida chromosome encoding a suite of such functions were deleted, resulting in the surface-naked strain EM371, the physical properties of which changed dramatically in respect to the wild type counterpart. As a consequence, surface-edited P. putida cells were unable to form biofilms on solid supports and, because of the swimming deficiency and other alterations, showed a much faster sedimentation in liquid media. Surface-naked bacteria were then used as carriers of interacting partners (e.g., Jun-Fos domains) ectopically expressed by means of an autotransporter display system on the now easily accessible cell envelope. Abstraction of individual bacteria as adhesin-coated spherocylinders enabled rigorous quantitative description of the multicell interplay brought about by thereby engineered physical interactions. The model was then applied to parametrize the data extracted from automated analysis of confocal microscopy images of the experimentally assembled bacterial flocks for analyzing their structure and distribution. The resulting data not only corroborated the value of P. putida EM371 over the parental strain as a platform for display artificial adhesins but also provided a strategy for rational engineering of catalytic communities.

Quasi-Elastic Neutron Scattering Studies on Hydration Water in Phospholipid Membranes

The dynamic behavior of hydration water in phospholipid membranes has been investigated to understand the relationship between water and biological molecules using various experimental techniques. Quasi-elastic neutron scattering (QENS) is an effective method for this purpose because the dynamic behaviors of both water and lipid molecules could be identified by using selective deuteration. In addition, the measurable ranges from the 10⁻¹² to 10⁻⁹ s time scale and the 10⁻¹¹ to 10⁻⁸ m length scale are suitable to investigate the slowing down of water molecules due to their interaction with lipid membranes. In this mini-review, QENS experiments on the dynamic behavior of hydration water molecules in neighboring phospholipid membranes are summarized.

A modification for the calculation of water depth profiles in oil-treated skin by in vivo confocal Raman microscopy

In this study, an extended calculation method for the determination of the water profiles in oil-treated skin is proposed, which is based on the calculation of the ratio between the Raman band intensities of water (3350-3550 cm^-1 ) and keratin Amide I at 1650 cm^-1 . The proposed method is compared with the conventional method based on the ratio of the Raman band intensities of water (3350-3550 cm^-1 ) and keratin at 2930 cm^-1 . The conventional method creates artifacts in the depth profiles of the water concentration in oil-treated skin, showing a lower amount of water in the upper and intermediate layers of the stratum corneum, which is due to the superposition of oil- and keratin-related Raman bands at 2930 cm^-1 . The proposed extended method shows no artifacts and has the potential to determine the water depth profiles after topical application of formulations on the skin.