Application of Compressive Sensing to Ultrasound Images: A Review

Detecting heart failure from B-mode ultrasound characterization of arterial pulse waves

This study investigated the sensitivity and specificity of identifying heart failure with reduced ejection fraction (HFrEF) from measurements of the intensity and timing of arterial pulse waves. Previously validated methods combining ultrafast B-mode ultrasound, plane-wave transmission, singular value decomposition (SVD), and speckle tracking were used to characterize the compression and decompression ("S" and "D") waves occurring in early and late systole, respectively, in the carotid arteries of outpatients with left ventricular ejection fraction (LVEF) < 40%, determined by echocardiography, and signs and symptoms of heart failure, or with LVEF ≥ 50% and no signs or symptoms of heart failure. On average, the HFrEF group had significantly reduced S-wave intensity and energy, a greater interval between the R wave of the ECG and the S wave, a reduced interval between the S and D waves, and an increase in the S-wave shift (SWS), a novel metric that characterizes the shift in timing of the S wave away from the R wave of the ECG and toward the D wave (all P < 0.01). Receiver operating characteristics (ROCs) were used to quantify for the first time how well wave metrics classified individual participants. S-wave intensity and energy gave areas under the ROC of 0.76-0.83, the ECG-S-wave interval gave 0.85-0.88, and the S-wave shift gave 0.88-0.92. Hence the methods, which are simple to use and do not require complex interpretation, provide sensitive and specific identification of HFrEF. If similar results were obtained in primary care, they could form the basis of techniques for heart failure screening.NEW & NOTEWORTHY We show that heart failure with reduced ejection fraction can be detected with excellent sensitivity and specificity in individual patients by using B-mode ultrasound to detect altered pulse wave intensity and timing in the carotid artery.

High-Throughput Mass Spectrometry Imaging of Biological Systems: Current Approaches and Future Directions

In the past two decades, the power of mass spectrometry imaging (MSI) for the label free spatial mapping of molecules in biological systems has been substantially enhanced by the development of approaches for imaging with high spatial resolution. With the increase in the spatial resolution, the experimental throughput has become a limiting factor for imaging of large samples with high spatial resolution and 3D imaging of tissues. Several experimental and computational approaches have been recently developed to enhance the throughput of MSI. In this critical review, we provide a succinct summary of the current approaches used to improve the throughput of MSI experiments. These approaches are focused on speeding up sampling, reducing the mass spectrometer acquisition time, and reducing the number of sampling locations. We discuss the rate-determining steps for different MSI methods and future directions in the development of high-throughput MSI techniques.

Ultrafast Plane Wave Imaging Using Tensor Completion-Based Minimum Variance Algorithm

OBJECTIVE

Coherent plane wave compounding (CPWC) imaging is an efficient technique in high-frame-rate ultrasound imaging. To improve the image quality obtained from the CPWC, the adaptive minimum variance (MV) algorithm can be used. However, the high computational complexity of this algorithm negatively affects the frame rate. In other words, achieving a high frame rate and high-quality features simultaneously remains a challenge in medical ultrasound imaging. The aim of the work described here was to develop an algorithm to tackle this challenge and improve the frame rate while preserving the good quality of the resulting image.

METHODS

A tensor completion (TC)-based MV algorithm is proposed to simultaneously improve the frame rate and image quality in CPWC. In the proposed method, the MV algorithm is applied to a limited number of pixels in the beamforming grid. Then, the appropriate values are assigned to the remaining unprocessed pixels by using the TC algorithm. The proposed algorithm speeds up the beamforming process, and consequently, improves the frame rate.

RESULTS

The computational complexity of the proposed TC-based MV algorithm is reduced compared with that of the conventional MV algorithm while the good quality of this algorithm is preserved. The results indicate that, in particular, by processing 40% of the beamforming grid using the MV beamformer followed by the TC algorithm, a reconstructed image comparable to that in the case in which the MV algorithm is performed on the full beamforming grid is obtained; the difference between the contrast-to-noise ratio evaluation metric between these two cases is about 0.16 dB for the experimental-resolution phantom. Also, the resulting images obtained from the MV algorithm and the TC-based MV method have the same resolution, indicating that the TC-based MV algorithm can successfully achieve the quality of the MV algorithm with a lower computational complexity.

CONCLUSION

The TC-based MV algorithm is proposed in CPWC with the goal of improving frame rate and image quality. Qualitative and quantitative results reveal that by use of the proposed algorithm, the quality of the reconstructed image will be comparable to that of the conventional MV algorithm, and the frame rate will be improved.

Plane wave ultrasound imaging using compressive sensing and minimum variance beamforming

Coherent plane-wave compounding (CPWC) is a widely used technique in medical ultrasound imaging due to its high frame rate property. It is well-known that increasing the plane waves leads to improving the image quality. However, the image quality still needs to be further improved in CPWC. In this regard, a variety of methods have been proposed. In this paper, a new compressive sensing (CS) based approach is introduced with the combination of the adaptive minimum variance (MV) algorithm to further improve the image quality in terms of resolution and contrast. In the proposed method, which is called the CS-based MV technique, the CS method is used in the receive direction to produce the beamformed data for each plane wave. Then, the MV algorithm is performed in the plane wave transmit angle direction to coherently compound the images and improve the resolution. Moreover, to deal with the high computational complexity and also, the needing for high memory space during the CS method implementation, an approximation is considered which results in considerably reduced computational burden and memory space. The results obtained from the simulated point targets show that the proposed method leads to resolution improvement for about 71%, 5.5%, and 37% respectively, compared to DAS, DAS+MV, and CS+DAS beamformers. Also, the quantitative results obtained from the experimental contrast phantom in plane wave imaging challenge in medical ultrasound (PICMUS) data show a 3.02 dB, 2.57 dB, and 2.24 dB improvement of the contrast ratio metric using the proposed method compared to DAS, DAS+MV, and double-MV methods, respectively, indicating the good performance of the proposed method in image quality improvement.

ω-k Algorithm for Sparse-Transmit Sparse-Receive Diverging Beam Synthetic Aperture Transmit Scheme

In synthetic aperture (SA) imaging reported in the ultrasound imaging literature, typically, the delay and sum (DAS) beamformer is used; however, it is computationally expensive due to the pixel-by-pixel processing performed in the time domain. Recently, the adaptation of frequency-domain beamformers for medical ultrasound SA imaging, particularly to single-element/multielement synthetic transmit aperture (STA/MSTA) schemes, has been reported. In such reports, usually, less attention is paid to reducing system complexity. Recently, a sparse-transmit sparse-receive version of diverging beam-based synthetic aperture technique (DBSAT) was shown to achieve a reduction in system complexity by using fewer parallel receive channels, yet it achieves better quality and higher frame rate than conventional focused beamforming. However, this was also demonstrated using the DAS beamformer. In this work, we aim at achieving a reduction in computational cost, in addition to a reduction in system complexity, by implementing a fast and efficient frequency-wavenumber ( ω - k ) algorithm for the sparse DBSAT scheme. In doing so, an additional novel step of recovering missing frame data due to sparse transmit is introduced, namely, projection onto elliptical sets (POES). The results from this novel combination of ω - k with POES recovery showed that it is feasible to achieve several orders of magnitude faster reconstruction compared with the standard DAS beamforming, without any compromise in the image quality and, in some cases, with improved image quality. The average value of the contrast-to-noise ratio (CNR) and signal-to-noise ratio (SNR) calculated from cyst at 15-mm depth obtained using the different schemes was 4.94 and 5.73 dB better when ω - k was employed instead of DAS, respectively. In addition, for the sparse data set acquired with a 50% overlap during transmit and 64 active receive elements, DAS reconstruction takes as long as ~647 s, whereas the ω - k algorithm takes only ~2 s when programmed and executed in MATLAB.

Trends in Compressive Sensing for EEG Signal Processing Applications

The tremendous progress of big data acquisition and processing in the field of neural engineering has enabled a better understanding of the patient's brain disorders with their neural rehabilitation, restoration, detection, and diagnosis. An integration of compressive sensing (CS) and neural engineering emerges as a new research area, aiming to deal with a large volume of neurological data for fast speed, long-term, and energy-saving purposes. Furthermore, electroencephalography (EEG) signals for brain-computer interfaces (BCIs) have shown to be very promising, with diverse neuroscience applications. In this review, we focused on EEG-based approaches which have benefited from CS in achieving fast and energy-saving solutions. In particular, we examine the current practices, scientific opportunities, and challenges of CS in the growing field of BCIs. We emphasized on summarizing major CS reconstruction algorithms, the sparse basis, and the measurement matrix used in CS to process the EEG signal. This literature review suggests that the selection of a suitable reconstruction algorithm, sparse basis, and measurement matrix can help to improve the performance of current CS-based EEG studies. In this paper, we also aim at providing an overview of the reconstruction free CS approach and the related literature in the field. Finally, we discuss the opportunities and challenges that arise from pushing the integration of the CS framework for BCI applications.