1
|
Liu H, Hu X, Zeng H, He C, Cheng F, Tang X, Wang J. A rapid and high-throughput system for the detection of transgenic products based on LAMP-CRISPR-Cas12a. Curr Res Food Sci 2023; 7:100605. [PMID: 37868002 PMCID: PMC10589767 DOI: 10.1016/j.crfs.2023.100605] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 09/21/2023] [Accepted: 09/25/2023] [Indexed: 10/24/2023] Open
Abstract
With the increasing acreage of genetically modified crops worldwide, rapid and efficient detection technologies have become very important for the regulation and screening of GM organisms. We constructed a method based on loop-mediated isothermal amplification (LAMP), CRISPR-Cas12a and lateral flow assay (LAMP-CRISPR-Cas12a-LFA). It is an intuitive, sensitive and specific fluorescence detection and test strip system to detect CP4-EPSPS and Cry1Ab/Ac genes in field screening. The LAMP-CRISPR-Cas12a-LFA method has a limit of detection (LOD) of 100 copies based on lateral flow test strips after optimization of the conditions with screened specific primers, and the entire detection process can be completed within 1 h at 61 °C. The system was used to evaluate field test samples and showed high reproducibility after testing products containing CP4-EPSPS and Cry1Ab/Ac genes, and both were detectable. The LAMP-CRISPR-Cas12a-LFA method established in this paper functions as a rapid field detection method. It requires only one portable thermostatic instrument, which renders it compatible with the rapid detection of field samples and useable at experimental workstations, in law enforcement field work, and in local inspection and quarantine departments.
Collapse
Affiliation(s)
- Hua Liu
- Institute of Biotechnology Research, Shanghai Academy of Agricultural Sciences, Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Road, Shanghai, 201106, China
| | - Xiuwen Hu
- College of Food Sciences and Technology, Shanghai Ocean University, 999 Huancheng Road Shanghai, 200120, China
| | - Haijuan Zeng
- Institute of Biotechnology Research, Shanghai Academy of Agricultural Sciences, Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Road, Shanghai, 201106, China
| | - Chuan He
- Institute of Biotechnology Research, Shanghai Academy of Agricultural Sciences, Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Road, Shanghai, 201106, China
| | - Fang Cheng
- Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Xueming Tang
- School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Jinbin Wang
- Institute of Biotechnology Research, Shanghai Academy of Agricultural Sciences, Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Road, Shanghai, 201106, China
| |
Collapse
|
2
|
Chou CC, Lin YT, Kuznetsova I, Wang GJ. Genetically Modified Soybean Detection Using a Biosensor Electrode with a Self-Assembled Monolayer of Gold Nanoparticles. BIOSENSORS 2022; 12:207. [PMID: 35448267 PMCID: PMC9025051 DOI: 10.3390/bios12040207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Revised: 03/22/2022] [Accepted: 03/28/2022] [Indexed: 06/14/2023]
Abstract
In this study, we proposed a genosensor that can qualitatively and quantitatively detect genetically modified soybeans using a simple electrode with evenly distributed single layer gold nanoparticles. The DNA sensing electrode is made by sputtering a gold film on the substrate, and then sequentially depositing 1,6-hexanedithiol and gold nanoparticles with sulfur groups on the substrate. Then, the complementary to the CaMV 35S promoter (P35S) was used as the capture probe. The target DNA directly extracted from the genetically modified soybeans rather than the synthesized DNA segments was used to construct the detection standard curve. The experimental results showed that our genosensor could directly detect genetically modified genes extracted from soybeans. We obtained two percentage calibration curves. The calibration curve corresponding to the lower percentage range (1-6%) exhibits a sensitivity of 2.36 Ω/% with R2 = 0.9983, while the calibration curve corresponding to the higher percentage range (6-40%) possesses a sensitivity of 0.1 Ω/% with R2 = 0.9928. The limit of detection would be 1%. The recovery rates for the 4% and 5.7% GMS DNA were measured to be 104.1% and 102.49% with RSD at 6.24% and 2.54%. The gold nanoparticle sensing electrode developed in this research is suitable for qualitative and quantitative detection of genetically modified soybeans and can be further applied to the detection of other genetically modified crops in the future.
Collapse
Affiliation(s)
- Cheng-Chi Chou
- Department of Mechanical Engineering, National Chung-Hsing University, Taichung 40227, Taiwan;
| | - Ying-Ting Lin
- Program in Tissue Engineering and Regenerative Medicine, National Chung-Hsing University, Taichung 40227, Taiwan;
| | - Iren Kuznetsova
- Kotelnikov Institute of Radio Engineering and Electronics, Russian Academy of Science, 125009 Moscow, Russia;
| | - Gou-Jen Wang
- Department of Mechanical Engineering, National Chung-Hsing University, Taichung 40227, Taiwan;
- Graduate Institute of Biomedical Engineering, National Chung-Hsing University, Taichung 40227, Taiwan
- Regenerative Medicine and Cell Therapy Research Center, Kaohsiung Medical University, Kaohsiung 80708, Taiwan
| |
Collapse
|
3
|
Qian C, Wang R, Wu H, Ping J, Wu J. Recent advances in emerging DNA-based methods for genetically modified organisms (GMOs) rapid detection. Trends Analyt Chem 2018. [DOI: 10.1016/j.trac.2018.09.021] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
|
4
|
Sánchez-Paniagua López M, Manzanares-Palenzuela CL, López-Ruiz B. Biosensors for GMO Testing: Nearly 25 Years of Research. Crit Rev Anal Chem 2018; 48:391-405. [DOI: 10.1080/10408347.2018.1442708] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Marta Sánchez-Paniagua López
- Sección Departamental de Química Analítica, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain
| | | | - Beatriz López-Ruiz
- Sección Departamental de Química Analítica, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain
| |
Collapse
|
5
|
Abstract
In light of the recently developed European Union (EU) Biofuels Strategy, the literature is reviewed to examine (a) the coherency of biofuel production with the EU nonindustrial vision of agriculture, and (b) given its insufficient land base, the implications of a proposed bioenergy pact to grow biofuel crops in the developing world to meet EU biofuel demands. The EU acknowledged that the use of food crops for biofuel production was based on wrong assumptions concerning climate change mitigation, and its support has now shifted to second-generation nonfood crops. The bioenergy pact entails (a) biofuel crops production in developing countries, especially Africa, that in the absence of environmental and social regulations may lead to ethical trade-offs in land use (food vs. fuel) and (b) the use of transgenic technology that conflicts with the EU’s own vision of sustainable agriculture.
Collapse
Affiliation(s)
- Luigi Ponti
- ENEA, Dipartimento BAS, Roma, Italy, Center for the Analysis of Sustainable Agricultural
Systems, Kensington, CA, USA,
| | - Andrew Paul Gutierrez
- Center for the Analysis of Sustainable Agricultural
Systems, Kensington, CA, USA, University of California, Berkeley, CA, USA
| |
Collapse
|