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Phusantisampan T, Yamkasem J, Tattiyapong P, Sriariyanun M, Surachetpong W. Specific and rapid detection of tilapia parvovirus using loop-mediated isothermal amplification (LAMP) method. JOURNAL OF FISH DISEASES 2022; 45:1893-1898. [PMID: 36048556 DOI: 10.1111/jfd.13712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 08/17/2022] [Accepted: 08/22/2022] [Indexed: 06/15/2023]
Affiliation(s)
- Theerawut Phusantisampan
- Department of Biotechnology, Faculty of Applied Science, King Mongkut's University of Technology North Bangkok, Bangkok, Thailand
- Microbial Informatics and Industrial Product of Microbe Research Center, King Mongkut's University of Technology North Bangkok, Bangkok, Thailand
| | - Jidapa Yamkasem
- Graduate Program in Animal Health and Biomedical Science, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
- Department of Veterinary Microbiology and Immunology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
| | - Puntanat Tattiyapong
- Department of Veterinary Microbiology and Immunology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
- Interdisciplinary Program in Genetic Engineering and Bioinformatics, Graduate school, Kasetsart University, Bangkok, Thailand
| | - Malinee Sriariyanun
- Department of Chemical and Process Engineering, Biorefinery and Process Automation Engineering Center, The Sirindhorn Thai-German International Graduate School of Engineering, King Mongkut's University of Technology North Bangkok, Bangkok, Thailand
| | - Win Surachetpong
- Graduate Program in Animal Health and Biomedical Science, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
- Department of Veterinary Microbiology and Immunology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
- Interdisciplinary Program in Genetic Engineering and Bioinformatics, Graduate school, Kasetsart University, Bangkok, Thailand
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A panoptic review of techniques for finfish disease diagnosis: The status quo and future perspectives. J Microbiol Methods 2022; 196:106477. [DOI: 10.1016/j.mimet.2022.106477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Revised: 04/21/2022] [Accepted: 04/21/2022] [Indexed: 12/27/2022]
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Suebsing R, Pradeep PJ, Jitrakorn S, Sirithammajak S, Kampeera J, Turner WA, Saksmerprome V, Withyachumnarnkul B, Kiatpathomchai W. Detection of natural infection of infectious spleen and kidney necrosis virus in farmed tilapia by hydroxynapthol blue-loop-mediated isothermal amplification assay. J Appl Microbiol 2016; 121:55-67. [PMID: 27138064 DOI: 10.1111/jam.13165] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2016] [Revised: 04/08/2016] [Accepted: 04/25/2016] [Indexed: 11/30/2022]
Abstract
AIMS Infectious spleen and kidney necrosis virus (ISKNV) has recently been recognized as a causative agent of serious systemic disease in tilapia. Our objective was to establish a new colorimetric loop-mediated isothermal amplification (LAMP) assay with pre-addition of hydroxynapthol blue (blue-LAMP) to investigate ISKNV transmission in tilapia. METHODS AND RESULTS The blue-LAMP, targeting a major capsid protein gene of ISKNV, was conducted at 65°C for 45 min, allowing unaided visual detection of the pathogen based on colour change without cross-amplification of other known fish pathogens tested. Comparison of blue-LAMP and PCR assays revealed a higher detection level for blue-LAMP assay (41·33%) in a population of farmed tilapia infected with ISKNV. The investigation of ISKNV transmission pattern in farmed red tilapia using the blue-LAMP revealed a possible matroclinical form. The presence of ISKNV in the gonad samples was confirmed by in situ LAMP assay. Positive signals only appeared in ovarian follicles, and not in oocytes. Moreover, tissue tropism assay revealed that the brain was the main target organ in both farmed red tilapia (40%) and Nile tilapia (20%). CONCLUSIONS The developed blue-LAMP assay has the potential to be used as a viable tool for screening covert and natural infections of ISKNV in tilapia. The evidence of vertical transmission of ISKNV infection in tilapia indicates the seriousness of this disease and will require a close attention and collaboration between tilapia hatcheries and disease experts in order to find a solution. SIGNIFICANCE AND IMPACT OF THE STUDY The new blue-LAMP assay is a time-saving and economically viable detection tool, which allows unaided visual detection for ISKNV in tilapia, and it could be applicable for field applications. Evidence on the vertical transmission of ISKNV in farmed tilapia suggests a need for developing farm management practices to control the spread of virus in aquaculture industries.
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Affiliation(s)
- R Suebsing
- Bioengineering and Sensing Technology Laboratory, National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
| | - P J Pradeep
- Faculty of Science, Center of Excellence for Shrimp Molecular Biology and Biotechnology (CENTEX Shrimp), Mahidol University, Bangkok, Thailand.,Faculty of Science and Industrial Technology, Aquatic Animal Biotechnology Research Center, Prince of Songkla University, Surat Thani, Thailand
| | - S Jitrakorn
- Faculty of Science, Center of Excellence for Shrimp Molecular Biology and Biotechnology (CENTEX Shrimp), Mahidol University, Bangkok, Thailand.,BIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
| | - S Sirithammajak
- Bioengineering and Sensing Technology Laboratory, National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
| | - J Kampeera
- Bioengineering and Sensing Technology Laboratory, National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
| | - W A Turner
- Nam Sai Farms Co., Ltd., Ban Sang, Prachinburi, Thailand
| | - V Saksmerprome
- Faculty of Science, Center of Excellence for Shrimp Molecular Biology and Biotechnology (CENTEX Shrimp), Mahidol University, Bangkok, Thailand.,BIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
| | - B Withyachumnarnkul
- Faculty of Science, Center of Excellence for Shrimp Molecular Biology and Biotechnology (CENTEX Shrimp), Mahidol University, Bangkok, Thailand.,Faculty of Science and Industrial Technology, Aquatic Animal Biotechnology Research Center, Prince of Songkla University, Surat Thani, Thailand.,Department of Anatomy, Faculty of Science, Mahidol University, Bangkok, Thailand
| | - W Kiatpathomchai
- Bioengineering and Sensing Technology Laboratory, National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
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Loop-mediated isothermal amplification (LAMP) assays for detection and identification of aquaculture pathogens: current state and perspectives. Appl Microbiol Biotechnol 2014; 98:2881-95. [DOI: 10.1007/s00253-014-5531-z] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2013] [Revised: 01/08/2014] [Accepted: 01/09/2014] [Indexed: 11/26/2022]
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Suebsing R, Kim JH, Kim SR, Park MA, Oh MJ. Detection of viruses in farmed rainbow trout (Oncorhynchus mykiss) in Korea by RT-LAMP assay. J Microbiol 2011; 49:741-6. [DOI: 10.1007/s12275-011-1209-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2011] [Accepted: 06/02/2011] [Indexed: 10/15/2022]
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