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Ruibal P, Oestereich L, Lüdtke A, Becker-Ziaja B, Wozniak DM, Kerber R, Korva M, Cabeza-Cabrerizo M, Bore JA, Koundouno FR, Duraffour S, Weller R, Thorenz A, Cimini E, Viola D, Agrati C, Repits J, Afrough B, Cowley LA, Ngabo D, Hinzmann J, Mertens M, Vitoriano I, Logue CH, Boettcher JP, Pallasch E, Sachse A, Bah A, Nitzsche K, Kuisma E, Michel J, Holm T, Zekeng EG, García-Dorival I, Wölfel R, Stoecker K, Fleischmann E, Strecker T, Di Caro A, Avšič-Županc T, Kurth A, Meschi S, Mély S, Newman E, Bocquin A, Kis Z, Kelterbaum A, Molkenthin P, Carletti F, Portmann J, Wolff S, Castilletti C, Schudt G, Fizet A, Ottowell LJ, Herker E, Jacobs T, Kretschmer B, Severi E, Ouedraogo N, Lago M, Negredo A, Franco L, Anda P, Schmiedel S, Kreuels B, Wichmann D, Addo MM, Lohse AW, De Clerck H, Nanclares C, Jonckheere S, Van Herp M, Sprecher A, Xiaojiang G, Carrington M, Miranda O, Castro CM, Gabriel M, Drury P, Formenty P, Diallo B, Koivogui L, Magassouba N, Carroll MW, Günther S, Muñoz-Fontela C. Unique human immune signature of Ebola virus disease in Guinea. Nature 2016; 533:100-4. [PMID: 27147028 PMCID: PMC4876960 DOI: 10.1038/nature17949] [Citation(s) in RCA: 145] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2015] [Accepted: 04/01/2016] [Indexed: 01/20/2023]
Abstract
Despite the magnitude of the Ebola virus disease (EVD) outbreak in West Africa, there is still a fundamental lack of knowledge about the pathophysiology of EVD. In particular, very little is known about human immune responses to Ebola virus. Here we evaluate the physiology of the human T cell immune response in EVD patients at the time of admission to the Ebola Treatment Center in Guinea, and longitudinally until discharge or death. Through the use of multiparametric flow cytometry established by the European Mobile Laboratory in the field, we identify an immune signature that is unique in EVD fatalities. Fatal EVD was characterized by a high percentage of CD4(+) and CD8(+) T cells expressing the inhibitory molecules CTLA-4 and PD-1, which correlated with elevated inflammatory markers and high virus load. Conversely, surviving individuals showed significantly lower expression of CTLA-4 and PD-1 as well as lower inflammation, despite comparable overall T cell activation. Concomitant with virus clearance, survivors mounted a robust Ebola-virus-specific T cell response. Our findings suggest that dysregulation of the T cell response is a key component of EVD pathophysiology.
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Affiliation(s)
- Paula Ruibal
- Heinrich Pette Institute, Leibniz Institute for Experimental Virology, 20251 Hamburg, Germany
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Lisa Oestereich
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Anja Lüdtke
- Heinrich Pette Institute, Leibniz Institute for Experimental Virology, 20251 Hamburg, Germany
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Beate Becker-Ziaja
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - David M Wozniak
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Romy Kerber
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Miša Korva
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, Slovenia
| | - Mar Cabeza-Cabrerizo
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Joseph A Bore
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Fara Raymond Koundouno
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Sophie Duraffour
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Romy Weller
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Experimental Virology, Twincore, Center for Experimental and Clinical Infection Research, 30625 Hannover, Germany
| | - Anja Thorenz
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Hannover Medical School, 30625 Hannover, Germany
| | - Eleonora Cimini
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Institute for Infectious Diseases 'Lazzaro Spallanzani', 00149 Rome, Italy
| | - Domenico Viola
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Institute for Infectious Diseases 'Lazzaro Spallanzani', 00149 Rome, Italy
| | - Chiara Agrati
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Institute for Infectious Diseases 'Lazzaro Spallanzani', 00149 Rome, Italy
| | - Johanna Repits
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Babak Afrough
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Lauren A Cowley
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Colindale Ave, London NW9 5EQ, UK
| | - Didier Ngabo
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Julia Hinzmann
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Robert Koch Institute, 13353 Berlin, Germany
| | - Marc Mertens
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Friedrich Loeffler Institute, 17493 Greifswald-Island of Riems, Germany
| | - Inês Vitoriano
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Christopher H Logue
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Jan Peter Boettcher
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Robert Koch Institute, 13353 Berlin, Germany
| | - Elisa Pallasch
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Andreas Sachse
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Robert Koch Institute, 13353 Berlin, Germany
| | - Amadou Bah
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Swiss Tropical and Public Health Institute, 4051 Basel, Switzerland
| | - Katja Nitzsche
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Eeva Kuisma
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Janine Michel
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Robert Koch Institute, 13353 Berlin, Germany
| | - Tobias Holm
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Elsa-Gayle Zekeng
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Isabel García-Dorival
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Infection and Global Health, University of Liverpool, Liverpool L69 7BE, UK
| | - Roman Wölfel
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Bundeswehr Institute of Microbiology, 80937 Munich, Germany
| | - Kilian Stoecker
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Bundeswehr Institute of Microbiology, 80937 Munich, Germany
| | - Erna Fleischmann
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Bundeswehr Institute of Microbiology, 80937 Munich, Germany
| | - Thomas Strecker
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Virology, Philipps University, 35043 Marburg, Germany
| | - Antonino Di Caro
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Institute for Infectious Diseases 'Lazzaro Spallanzani', 00149 Rome, Italy
| | - Tatjana Avšič-Županc
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, Slovenia
| | - Andreas Kurth
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Robert Koch Institute, 13353 Berlin, Germany
| | - Silvia Meschi
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Institute for Infectious Diseases 'Lazzaro Spallanzani', 00149 Rome, Italy
| | - Stephane Mély
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Laboratoire P4-Jean Mérieux, US003 INSERM, 69365 Lyon, France
| | - Edmund Newman
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Anne Bocquin
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Laboratoire P4-Jean Mérieux, US003 INSERM, 69365 Lyon, France
| | - Zoltan Kis
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Center for Epidemiology, Hungarian National Biosafety Laboratory, H1097 Budapest, Hungary
- European Centre for Disease Prevention and Control, 171 65 Solna, Sweden
| | - Anne Kelterbaum
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Virology, Philipps University, 35043 Marburg, Germany
| | - Peter Molkenthin
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Bundeswehr Institute of Microbiology, 80937 Munich, Germany
| | - Fabrizio Carletti
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Institute for Infectious Diseases 'Lazzaro Spallanzani', 00149 Rome, Italy
| | - Jasmine Portmann
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Federal Office for Civil Protection, CH-3700 Spiez, Switzerland
| | - Svenja Wolff
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Virology, Philipps University, 35043 Marburg, Germany
| | - Concetta Castilletti
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- National Institute for Infectious Diseases 'Lazzaro Spallanzani', 00149 Rome, Italy
| | - Gordian Schudt
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Institute of Virology, Philipps University, 35043 Marburg, Germany
| | - Alexandra Fizet
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Unité de Biologie des Infections Virales Emergentes, Institut Pasteur, 69365 Lyon, France
| | - Lisa J Ottowell
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Eva Herker
- Heinrich Pette Institute, Leibniz Institute for Experimental Virology, 20251 Hamburg, Germany
| | - Thomas Jacobs
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
| | - Birte Kretschmer
- Eurice, European Research and Project Office, 10115 Berlin, Germany
| | - Ettore Severi
- European Centre for Disease Prevention and Control, 171 65 Solna, Sweden
| | | | - Mar Lago
- Infectious Diseases Unit, Internal Medicine Service, Hospital La Paz, 28046 Madrid, Spain
| | - Anabel Negredo
- National Center of Microbiology, Institute of Health 'Carlos III', 28220 Madrid, Spain
| | - Leticia Franco
- National Center of Microbiology, Institute of Health 'Carlos III', 28220 Madrid, Spain
| | - Pedro Anda
- National Center of Microbiology, Institute of Health 'Carlos III', 28220 Madrid, Spain
| | - Stefan Schmiedel
- University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany
| | - Benno Kreuels
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany
| | - Dominic Wichmann
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany
| | - Marylyn M Addo
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany
| | - Ansgar W Lohse
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany
| | | | | | | | | | | | - Gao Xiaojiang
- Cancer and Inflammation Program, Laboratory of Experimental Immunology, Leidos Biomedical Research, Frederick National Laboratory for Cancer Research, Frederick, Maryland 21702, USA
- Ragon Institute of MGH, MIT and Harvard, Cambridge, Massachusetts 02139, USA
| | - Mary Carrington
- Cancer and Inflammation Program, Laboratory of Experimental Immunology, Leidos Biomedical Research, Frederick National Laboratory for Cancer Research, Frederick, Maryland 21702, USA
- Ragon Institute of MGH, MIT and Harvard, Cambridge, Massachusetts 02139, USA
| | - Osvaldo Miranda
- Hospital Militar Central Dr. Carlos J. Finlay, 11400 Havana, Cuba
| | - Carlos M Castro
- Hospital Militar Central Dr. Carlos J. Finlay, 11400 Havana, Cuba
| | - Martin Gabriel
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - Patrick Drury
- World Health Organization, 1211 Geneva 27, Switzerland
| | | | | | | | - N'Faly Magassouba
- Université Gamal Abdel Nasser de Conakry, CHU Donka, 2101 Conakry, Guinea
| | - Miles W Carroll
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
- Public Health England, Porton Down, Salisbury SP4 0JG, UK
| | - Stephan Günther
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
| | - César Muñoz-Fontela
- Heinrich Pette Institute, Leibniz Institute for Experimental Virology, 20251 Hamburg, Germany
- Bernhard Nocht Institute for Tropical Medicine, World Health Organization Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, 20359 Hamburg, Germany
- German Center for Infection Research (DZIF), Partner Sites Hamburg, Munich, and Marburg, Germany
- European Mobile Laboratory Consortium, Bernhard-Nocht-Institute for Tropical Medicine, D-20359 Hamburg, Germany
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