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For: Lowe CD, Mello LV, Samatar N, Martin LE, Montagnes DJS, Watts PC. The transcriptome of the novel dinoflagellate Oxyrrhis marina (Alveolata: Dinophyceae): response to salinity examined by 454 sequencing. BMC Genomics 2011;12:519. [PMID: 22014029 PMCID: PMC3209475 DOI: 10.1186/1471-2164-12-519] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2011] [Accepted: 10/20/2011] [Indexed: 11/30/2022]  Open
Number Cited by Other Article(s)
1
Cusick KD, Wei B, Hall S, Brown N, Widder EA, Boyer GL. Toxin Dynamics among Populations of the Bioluminescent HAB Species Pyrodinium bahamense from the Indian River Lagoon, FL. Mar Drugs 2024;22:311. [PMID: 39057420 PMCID: PMC11277979 DOI: 10.3390/md22070311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2024] [Revised: 06/21/2024] [Accepted: 06/26/2024] [Indexed: 07/28/2024]  Open
2
Rengefors K, Annenkova N, Wallenius J, Svensson M, Kremp A, Ahrén D. Population genomic analyses reveal that salinity and geographic isolation drive diversification in a free-living protist. Sci Rep 2024;14:4986. [PMID: 38424140 PMCID: PMC10904836 DOI: 10.1038/s41598-024-55362-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Accepted: 02/22/2024] [Indexed: 03/02/2024]  Open
3
Coelho JC, Calhoun ED, Calhoun GN, Poole AZ. Patchy Distribution of GTPases of Immunity Associated Proteins (GIMAP) within Cnidarians and Dinoflagellates Suggests a Complex Evolutionary History. Genome Biol Evol 2022;14:6500283. [PMID: 35015849 PMCID: PMC8857920 DOI: 10.1093/gbe/evac002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/05/2022] [Indexed: 11/24/2022]  Open
4
Bioluminescence and Photoreception in Unicellular Organisms: Light-Signalling in a Bio-Communication Perspective. Int J Mol Sci 2021;22:ijms222111311. [PMID: 34768741 PMCID: PMC8582858 DOI: 10.3390/ijms222111311] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Revised: 10/12/2021] [Accepted: 10/13/2021] [Indexed: 12/13/2022]  Open
5
Expression Patterns of the Heat Shock Protein 90 (Hsp90) Gene Suggest Its Possible Involvement in Maintaining the Dormancy of Dinoflagellate Resting Cysts. Int J Mol Sci 2021;22:ijms222011054. [PMID: 34681714 PMCID: PMC8538777 DOI: 10.3390/ijms222011054] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2021] [Revised: 10/05/2021] [Accepted: 10/08/2021] [Indexed: 11/21/2022]  Open
6
Sprecher BN, Zhang H, Lin S. Nuclear Gene Transformation in the Dinoflagellate Oxyrrhis marina. Microorganisms 2020;8:E126. [PMID: 31963386 PMCID: PMC7022241 DOI: 10.3390/microorganisms8010126] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2019] [Revised: 01/10/2020] [Accepted: 01/14/2020] [Indexed: 11/16/2022]  Open
7
Omics Analysis for Dinoflagellates Biology Research. Microorganisms 2019;7:microorganisms7090288. [PMID: 31450827 PMCID: PMC6780300 DOI: 10.3390/microorganisms7090288] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2019] [Revised: 08/20/2019] [Accepted: 08/21/2019] [Indexed: 01/13/2023]  Open
8
Zaheri B, Dagenais-Bellefeuille S, Song B, Morse D. Assessing Transcriptional Responses to Light by the Dinoflagellate Symbiodinium. Microorganisms 2019;7:microorganisms7080261. [PMID: 31416260 PMCID: PMC6723345 DOI: 10.3390/microorganisms7080261] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2019] [Revised: 08/07/2019] [Accepted: 08/12/2019] [Indexed: 11/16/2022]  Open
9
Heyerhoff B, Nguyen T, Hillebrand H, Rhiel E. On the morphology and predatory behavior of the dinoflagellate Oxyrrhis marina exposed to reduced salinity. Eur J Protistol 2019;68:37-47. [PMID: 30708241 DOI: 10.1016/j.ejop.2019.01.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Revised: 12/27/2018] [Accepted: 01/07/2019] [Indexed: 11/27/2022]
10
Roy S, Jagus R, Morse D. Translation and Translational Control in Dinoflagellates. Microorganisms 2018;6:microorganisms6020030. [PMID: 29642465 PMCID: PMC6027434 DOI: 10.3390/microorganisms6020030] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2018] [Revised: 04/03/2018] [Accepted: 04/05/2018] [Indexed: 12/24/2022]  Open
11
Current Knowledge and Recent Advances in Marine Dinoflagellate Transcriptomic Research. JOURNAL OF MARINE SCIENCE AND ENGINEERING 2018. [DOI: 10.3390/jmse6010013] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
12
RNA-Seq as an Emerging Tool for Marine Dinoflagellate Transcriptome Analysis: Process and Challenges. Processes (Basel) 2018. [DOI: 10.3390/pr6010005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
13
Deng Y, Hu Z, Shang L, Peng Q, Tang YZ. Transcriptomic Analyses of Scrippsiella trochoidea Reveals Processes Regulating Encystment and Dormancy in the Life Cycle of a Dinoflagellate, with a Particular Attention to the Role of Abscisic Acid. Front Microbiol 2017;8:2450. [PMID: 29312167 PMCID: PMC5732363 DOI: 10.3389/fmicb.2017.02450] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Accepted: 11/27/2017] [Indexed: 12/26/2022]  Open
14
The Mechanism of Diarrhetic Shellfish Poisoning Toxin Production in Prorocentrum spp.: Physiological and Molecular Perspectives. Toxins (Basel) 2016;8:toxins8100272. [PMID: 27669302 PMCID: PMC5086633 DOI: 10.3390/toxins8100272] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2016] [Revised: 08/10/2016] [Accepted: 09/07/2016] [Indexed: 11/16/2022]  Open
15
Jones GD, Williams EP, Place AR, Jagus R, Bachvaroff TR. The alveolate translation initiation factor 4E family reveals a custom toolkit for translational control in core dinoflagellates. BMC Evol Biol 2015;15:14. [PMID: 25886308 PMCID: PMC4330643 DOI: 10.1186/s12862-015-0301-9] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2014] [Accepted: 01/29/2015] [Indexed: 01/27/2023]  Open
16
Meyer JM, Rödelsperger C, Eichholz K, Tillmann U, Cembella A, McGaughran A, John U. Transcriptomic characterisation and genomic glimps into the toxigenic dinoflagellate Azadinium spinosum, with emphasis on polykeitde synthase genes. BMC Genomics 2015;16:27. [PMID: 25612855 PMCID: PMC4316588 DOI: 10.1186/s12864-014-1205-6] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2014] [Accepted: 12/24/2014] [Indexed: 02/04/2023]  Open
17
Minter EJA, Lowe CD, Brockhurst MA, Watts PC. A rapid and cost‐effective quantitative microsatellite genotyping protocol to estimate intraspecific competition in protist microcosm experiments. Methods Ecol Evol 2014. [DOI: 10.1111/2041-210x.12321] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
18
Hook SE, Twine NA, Simpson SL, Spadaro DA, Moncuquet P, Wilkins MR. 454 pyrosequencing-based analysis of gene expression profiles in the amphipod Melita plumulosa: transcriptome assembly and toxicant induced changes. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2014;153:73-88. [PMID: 24434169 DOI: 10.1016/j.aquatox.2013.11.022] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2013] [Revised: 11/26/2013] [Accepted: 11/28/2013] [Indexed: 05/20/2023]
19
Hook SE, Osborn HL, Gissi F, Moncuquet P, Twine NA, Wilkins MR, Adams MS. RNA-Seq analysis of the toxicant-induced transcriptome of the marine diatom, Ceratoneis closterium. Mar Genomics 2014;16:45-53. [DOI: 10.1016/j.margen.2013.12.004] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2013] [Revised: 11/29/2013] [Accepted: 12/18/2013] [Indexed: 01/17/2023]
20
Comparative transcriptome analysis of four prymnesiophyte algae. PLoS One 2014;9:e97801. [PMID: 24926657 PMCID: PMC4057078 DOI: 10.1371/journal.pone.0097801] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2013] [Accepted: 04/23/2014] [Indexed: 11/25/2022]  Open
21
Lee R, Lai H, Malik SB, Saldarriaga JF, Keeling PJ, Slamovits CH. Analysis of EST data of the marine protist Oxyrrhis marina, an emerging model for alveolate biology and evolution. BMC Genomics 2014;15:122. [PMID: 24512041 PMCID: PMC3942190 DOI: 10.1186/1471-2164-15-122] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2013] [Accepted: 02/06/2014] [Indexed: 12/27/2022]  Open
22
Wang DZ, Zhang H, Zhang Y, Zhang SF. Marine dinoflagellate proteomics: current status and future perspectives. J Proteomics 2014;105:121-32. [PMID: 24503187 DOI: 10.1016/j.jprot.2014.01.026] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2013] [Revised: 01/21/2014] [Accepted: 01/24/2014] [Indexed: 11/30/2022]
23
Transcription and Maturation of mRNA in Dinoflagellates. Microorganisms 2013;1:71-99. [PMID: 27694765 PMCID: PMC5029490 DOI: 10.3390/microorganisms1010071] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2013] [Revised: 09/10/2013] [Accepted: 10/14/2013] [Indexed: 01/17/2023]  Open
24
Biology of the Marine Heterotrophic Dinoflagellate Oxyrrhis marina: Current Status and Future Directions. Microorganisms 2013;1:33-57. [PMID: 27694763 PMCID: PMC5029500 DOI: 10.3390/microorganisms1010033] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2013] [Revised: 09/02/2013] [Accepted: 10/08/2013] [Indexed: 11/17/2022]  Open
25
Ouyang LL, Chen SH, Li Y, Zhou ZG. Transcriptome analysis reveals unique C4-like photosynthesis and oil body formation in an arachidonic acid-rich microalga Myrmecia incisa Reisigl H4301. BMC Genomics 2013;14:396. [PMID: 23759028 PMCID: PMC3686703 DOI: 10.1186/1471-2164-14-396] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2013] [Accepted: 06/06/2013] [Indexed: 11/10/2022]  Open
26
Altered expression of Na+/K+–ATPase and other osmoregulatory genes in the gills of euryhaline animals in response to salinity transfer: A meta-analysis of 59 quantitative PCR studies over 10years. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 2013;8:131-40. [DOI: 10.1016/j.cbd.2013.01.003] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2012] [Revised: 01/31/2013] [Accepted: 01/31/2013] [Indexed: 01/03/2023]
27
Dinoflagellate tandem array gene transcripts are highly conserved and not polycistronic. Proc Natl Acad Sci U S A 2012;109:15793-8. [PMID: 23019363 DOI: 10.1073/pnas.1206683109] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
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