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For: Niewerth H, Schuldes J, Parschat K, Kiefer P, Vorholt JA, Daniel R, Fetzner S. Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a. BMC Genomics 2012;13:534. [PMID: 23039946 PMCID: PMC3534580 DOI: 10.1186/1471-2164-13-534] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2012] [Accepted: 10/01/2012] [Indexed: 01/01/2023]  Open
Number Cited by Other Article(s)
1
El-Sabeh A, Mlesnita AM, Munteanu IT, Honceriu I, Kallabi F, Boiangiu RS, Mihasan M. Characterisation of the Paenarthrobacter nicotinovorans ATCC 49919 genome and identification of several strains harbouring a highly syntenic nic-genes cluster. BMC Genomics 2023;24:536. [PMID: 37697273 PMCID: PMC10494377 DOI: 10.1186/s12864-023-09644-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Accepted: 09/01/2023] [Indexed: 09/13/2023]  Open
2
Involvement of Versatile Bacteria Belonging to the Genus Arthrobacter in Milk and Dairy Products. Foods 2023;12:foods12061270. [PMID: 36981196 PMCID: PMC10048301 DOI: 10.3390/foods12061270] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 03/13/2023] [Accepted: 03/15/2023] [Indexed: 03/19/2023]  Open
3
Nosalova L, Willner J, Fornalczyk A, Saternus M, Sedlakova-Kadukova J, Piknova M, Pristas P. Diversity, heavy metals, and antibiotic resistance in culturable heterotrophic bacteria isolated from former lead–silver–zinc mine heap in Tarnowskie Gory (Silesia, Poland). Arch Microbiol 2023;205:26. [DOI: 10.1007/s00203-022-03369-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Revised: 11/29/2022] [Accepted: 12/06/2022] [Indexed: 12/15/2022]
4
Biodegradation of Crystalline and Nonaqueous Phase Liquid-Dissolved ATRAZINE by Arthrobacter sp. ST11 with Cd2+ Resistance. Catalysts 2022. [DOI: 10.3390/catal12121653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]  Open
5
Tan F, Cheng J, Zhang Y, Jiang X, Liu Y. Genomics analysis and degradation characteristics of lignin by Streptomyces thermocarboxydus strain DF3-3. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2022;15:78. [PMID: 35831866 PMCID: PMC9277890 DOI: 10.1186/s13068-022-02175-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Accepted: 07/01/2022] [Indexed: 11/27/2022]
6
Impact of Probiotic Geotrichum candidum QAUGC01 on Health, Productivity, and Gut Microbial Diversity of Dairy Cattle. Curr Microbiol 2022;79:376. [DOI: 10.1007/s00284-022-03074-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 10/04/2022] [Indexed: 11/06/2022]
7
Simpson BS, Jaunay EL, Ghetia M, Nguyen L, Bade R, White JM, Gerber C. Methcathinone in wastewater: Drug of choice, or artefact? THE SCIENCE OF THE TOTAL ENVIRONMENT 2022;836:155696. [PMID: 35525340 DOI: 10.1016/j.scitotenv.2022.155696] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Revised: 04/28/2022] [Accepted: 04/30/2022] [Indexed: 06/14/2023]
8
You Z, Deng J, Liu J, Fu J, Xiong H, Luo W, Xiong J. Seasonal variations in the composition and diversity of gut microbiota in white-lipped deer (Cervus albirostris). PeerJ 2022;10:e13753. [PMID: 35873913 PMCID: PMC9302429 DOI: 10.7717/peerj.13753] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2022] [Accepted: 06/28/2022] [Indexed: 01/17/2023]  Open
9
Gushgari-Doyle S, Lui LM, Nielsen TN, Wu X, Malana RG, Hendrickson AJ, Carion H, Poole FL, Adams MWW, Arkin AP, Chakraborty R. Genotype to ecotype in niche environments: adaptation of Arthrobacter to carbon availability and environmental conditions. ISME COMMUNICATIONS 2022;2:32. [PMID: 37938300 PMCID: PMC9723602 DOI: 10.1038/s43705-022-00113-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Revised: 02/23/2022] [Accepted: 03/07/2022] [Indexed: 07/04/2023]
10
Ya H, Jiang B, Xing Y, Zhang T, Lv M, Wang X. Recent advances on ecological effects of microplastics on soil environment. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021;798:149338. [PMID: 34375233 DOI: 10.1016/j.scitotenv.2021.149338] [Citation(s) in RCA: 100] [Impact Index Per Article: 33.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Revised: 07/22/2021] [Accepted: 07/25/2021] [Indexed: 05/22/2023]
11
Panikov NS. Genome-Scale Reconstruction of Microbial Dynamic Phenotype: Successes and Challenges. Microorganisms 2021;9:2352. [PMID: 34835477 PMCID: PMC8621822 DOI: 10.3390/microorganisms9112352] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Revised: 10/18/2021] [Accepted: 10/27/2021] [Indexed: 12/04/2022]  Open
12
Singh A, Kumar Pandey A, Kumar Dubey S. Biodegradation of isoprene by Arthrobacter sp. strain BHU FT2: Genomics-proteomics enabled novel insights. BIORESOURCE TECHNOLOGY 2021;340:125634. [PMID: 34325393 DOI: 10.1016/j.biortech.2021.125634] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Revised: 07/16/2021] [Accepted: 07/17/2021] [Indexed: 06/13/2023]
13
Manganese-Oxidizing Antarctic Bacteria (Mn-Oxb) Release Reactive Oxygen Species (ROS) as Secondary Mn(II) Oxidation Mechanisms to Avoid Toxicity. BIOLOGY 2021;10:biology10101004. [PMID: 34681103 PMCID: PMC8533519 DOI: 10.3390/biology10101004] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Revised: 09/22/2021] [Accepted: 09/26/2021] [Indexed: 11/17/2022]
14
Zargar AN, Kumar A, Sinha A, Kumar M, Skiadas I, Mishra S, Srivastava P. Asphaltene biotransformation for heavy oil upgradation. AMB Express 2021;11:127. [PMID: 34491455 PMCID: PMC8423941 DOI: 10.1186/s13568-021-01285-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Accepted: 08/19/2021] [Indexed: 11/24/2022]  Open
15
Tsagogiannis E, Vandera E, Primikyri A, Asimakoula S, Tzakos AG, Gerothanassis IP, Koukkou AI. Characterization of Protocatechuate 4,5-Dioxygenase from Pseudarthrobacter phenanthrenivorans Sphe3 and In Situ Reaction Monitoring in the NMR Tube. Int J Mol Sci 2021;22:9647. [PMID: 34502555 PMCID: PMC8431788 DOI: 10.3390/ijms22179647] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Revised: 08/30/2021] [Accepted: 09/02/2021] [Indexed: 11/16/2022]  Open
16
Chuang S, Yang H, Wang X, Xue C, Jiang J, Hong Q. Potential effects of Rhodococcus qingshengii strain djl-6 on the bioremediation of carbendazim-contaminated soil and the assembly of its microbiome. JOURNAL OF HAZARDOUS MATERIALS 2021;414:125496. [PMID: 33667802 DOI: 10.1016/j.jhazmat.2021.125496] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Revised: 02/18/2021] [Accepted: 02/19/2021] [Indexed: 06/12/2023]
17
Shen L, Liu Y, Allen MA, Xu B, Wang N, Williams TJ, Wang F, Zhou Y, Liu Q, Cavicchioli R. Linking genomic and physiological characteristics of psychrophilic Arthrobacter to metagenomic data to explain global environmental distribution. MICROBIOME 2021;9:136. [PMID: 34118971 PMCID: PMC8196931 DOI: 10.1186/s40168-021-01084-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Accepted: 04/21/2021] [Indexed: 06/12/2023]
18
Han SR, Kim B, Jang JH, Park H, Oh TJ. Complete genome sequence of Arthrobacter sp. PAMC25564 and its comparative genome analysis for elucidating the role of CAZymes in cold adaptation. BMC Genomics 2021;22:403. [PMID: 34078272 PMCID: PMC8171050 DOI: 10.1186/s12864-021-07734-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 05/07/2021] [Indexed: 11/10/2022]  Open
19
Chauhan PS. Role of various bacterial enzymes in complete depolymerization of lignin: A review. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2020. [DOI: 10.1016/j.bcab.2020.101498] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
20
Povedano-Priego C, Jroundi F, Lopez-Fernandez M, Sánchez-Castro I, Martin-Sánchez I, Huertas FJ, Merroun ML. Shifts in bentonite bacterial community and mineralogy in response to uranium and glycerol-2-phosphate exposure. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019;692:219-232. [PMID: 31349163 DOI: 10.1016/j.scitotenv.2019.07.228] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Revised: 07/15/2019] [Accepted: 07/15/2019] [Indexed: 06/10/2023]
21
Defining lower limits of biodegradation: atrazine degradation regulated by mass transfer and maintenance demand in Arthrobacter aurescens TC1. ISME JOURNAL 2019;13:2236-2251. [PMID: 31073212 PMCID: PMC6776027 DOI: 10.1038/s41396-019-0430-z] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/10/2018] [Revised: 04/12/2019] [Accepted: 04/16/2019] [Indexed: 12/31/2022]
22
Guo X, Xie C, Wang L, Li Q, Wang Y. Biodegradation of persistent environmental pollutants by Arthrobacter sp. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019;26:8429-8443. [PMID: 30706270 DOI: 10.1007/s11356-019-04358-0] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Accepted: 01/23/2019] [Indexed: 05/17/2023]
23
Learman DR, Ahmad Z, Brookshier A, Henson MW, Hewitt V, Lis A, Morrison C, Robinson A, Todaro E, Wologo E, Wynne S, Alm EW, Kourtev PS. Comparative genomics of 16 Microbacterium spp. that tolerate multiple heavy metals and antibiotics. PeerJ 2019;6:e6258. [PMID: 30671291 PMCID: PMC6336093 DOI: 10.7717/peerj.6258] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Accepted: 12/06/2018] [Indexed: 11/20/2022]  Open
24
Romaniuk K, Golec P, Dziewit L. Insight Into the Diversity and Possible Role of Plasmids in the Adaptation of Psychrotolerant and Metalotolerant Arthrobacter spp. to Extreme Antarctic Environments. Front Microbiol 2018;9:3144. [PMID: 30619210 PMCID: PMC6305408 DOI: 10.3389/fmicb.2018.03144] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2018] [Accepted: 12/04/2018] [Indexed: 11/13/2022]  Open
25
Tuo X, Gu J, Wang X, Sun Y, Duan M, Sun W, Yin Y, Guo A, Zhang L. Prevalence of quinolone resistance genes, copper resistance genes, and the bacterial communities in a soil-ryegrass system co-polluted with copper and ciprofloxacin. CHEMOSPHERE 2018;197:643-650. [PMID: 29407828 DOI: 10.1016/j.chemosphere.2018.01.033] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2017] [Revised: 01/02/2018] [Accepted: 01/09/2018] [Indexed: 06/07/2023]
26
Characterization of the genome of a Nocardia strain isolated from soils in the Qinghai-Tibetan Plateau that specifically degrades crude oil and of this biodegradation. Genomics 2018;111:356-366. [PMID: 29474825 DOI: 10.1016/j.ygeno.2018.02.010] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Accepted: 02/16/2018] [Indexed: 11/22/2022]
27
Dibutyl phthalate alters the metabolic pathways of microbes in black soils. Sci Rep 2018;8:2605. [PMID: 29422490 PMCID: PMC5805725 DOI: 10.1038/s41598-018-21030-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2017] [Accepted: 01/29/2018] [Indexed: 01/08/2023]  Open
28
Zhang L, Yue Q, Yang K, Zhao P, Gao B. Enhanced phosphorus and ciprofloxacin removal in a modified BAF system by configuring Fe-C micro electrolysis: Investigation on pollutants removal and degradation mechanisms. JOURNAL OF HAZARDOUS MATERIALS 2018;342:705-714. [PMID: 28917199 DOI: 10.1016/j.jhazmat.2017.09.010] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2017] [Revised: 09/02/2017] [Accepted: 09/07/2017] [Indexed: 06/07/2023]
29
Qu Y, Ma Q, Liu Z, Wang W, Tang H, Zhou J, Xu P. Unveiling the biotransformation mechanism of indole in a Cupriavidus sp. strain. Mol Microbiol 2017;106:905-918. [PMID: 28963777 DOI: 10.1111/mmi.13852] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/27/2017] [Indexed: 01/13/2023]
30
New Genome Sequence of an Echinaceapurpurea Endophyte, Arthrobacter sp. Strain EpSL27, Able To Inhibit Human-Opportunistic Pathogens. GENOME ANNOUNCEMENTS 2017. [PMID: 28642378 PMCID: PMC5481584 DOI: 10.1128/genomea.00565-17] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
31
Kaliniene L, Šimoliūnas E, Truncaitė L, Zajančkauskaitė A, Nainys J, Kaupinis A, Valius M, Meškys R. Molecular Analysis of Arthrobacter Myovirus vB_ArtM-ArV1: We Blame It on the Tail. J Virol 2017;91:e00023-17. [PMID: 28122988 PMCID: PMC5375659 DOI: 10.1128/jvi.00023-17] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2017] [Accepted: 01/23/2017] [Indexed: 11/20/2022]  Open
32
Kanyó I, Molnár LV. Procaryotic species and subspecies delineation using average nucleotide identity and gene order conservation. GENE REPORTS 2016. [DOI: 10.1016/j.genrep.2016.09.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
33
Insights into microbial diversity in wastewater treatment systems: How far have we come? Biotechnol Adv 2016;34:790-802. [DOI: 10.1016/j.biotechadv.2016.04.003] [Citation(s) in RCA: 91] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2015] [Revised: 02/15/2016] [Accepted: 04/07/2016] [Indexed: 11/16/2022]
34
Mihăşan M. Bioinformatics-Based Molecular Classification of Arthrobacter Plasmids. Cell Mol Biol Lett 2016. [PMID: 26208384 DOI: 10.1515/cmble-2015-0036] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
35
Lin H, Jin D, Freitag TE, Sun W, Yu Q, Fu J, Ma J. A compositional shift in the soil microbiome induced by tetracycline, sulfamonomethoxine and ciprofloxacin entering a plant-soil system. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2016;212:440-448. [PMID: 26952272 DOI: 10.1016/j.envpol.2016.02.043] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2015] [Revised: 02/19/2016] [Accepted: 02/21/2016] [Indexed: 06/05/2023]
36
Complete Genome Sequence of Arthrobacter sp. ATCC 21022, a Host for Bacteriophage Discovery. GENOME ANNOUNCEMENTS 2016;4:4/2/e00168-16. [PMID: 27013048 PMCID: PMC4807237 DOI: 10.1128/genomea.00168-16] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
37
Plasmid-Mediated Tolerance Toward Environmental Pollutants. Microbiol Spectr 2016;2. [PMID: 26104447 DOI: 10.1128/microbiolspec.plas-0013-2013] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
38
Wang W, Cao J, Yang F, Wang X, Zheng S, Sharshov K, Li L. High-throughput sequencing reveals the core gut microbiome of Bar-headed goose (Anser indicus) in different wintering areas in Tibet. Microbiologyopen 2016;5:287-95. [PMID: 26842811 PMCID: PMC4831473 DOI: 10.1002/mbo3.327] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2015] [Revised: 10/31/2015] [Accepted: 11/04/2015] [Indexed: 12/16/2022]  Open
39
Kameshwar AKS, Qin W. Recent Developments in Using Advanced Sequencing Technologies for the Genomic Studies of Lignin and Cellulose Degrading Microorganisms. Int J Biol Sci 2016;12:156-71. [PMID: 26884714 PMCID: PMC4737673 DOI: 10.7150/ijbs.13537] [Citation(s) in RCA: 65] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2015] [Accepted: 11/03/2015] [Indexed: 01/23/2023]  Open
40
Henson MW, Santo Domingo JW, Kourtev PS, Jensen RV, Dunn JA, Learman DR. Metabolic and genomic analysis elucidates strain-level variation in Microbacterium spp. isolated from chromate contaminated sediment. PeerJ 2015;3:e1395. [PMID: 26587353 PMCID: PMC4647564 DOI: 10.7717/peerj.1395] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2015] [Accepted: 10/19/2015] [Indexed: 01/04/2023]  Open
41
Sagarkar S, Bhardwaj P, Storck V, Devers-Lamrani M, Martin-Laurent F, Kapley A. s-triazine degrading bacterial isolate Arthrobacter sp. AK-YN10, a candidate for bioaugmentation of atrazine contaminated soil. Appl Microbiol Biotechnol 2015;100:903-13. [PMID: 26403923 DOI: 10.1007/s00253-015-6975-5] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2015] [Revised: 08/20/2015] [Accepted: 09/01/2015] [Indexed: 12/13/2022]
42
Rhodococcus erythropolis BG43 Genes Mediating Pseudomonas aeruginosa Quinolone Signal Degradation and Virulence Factor Attenuation. Appl Environ Microbiol 2015;81:7720-9. [PMID: 26319870 DOI: 10.1128/aem.02145-15] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2015] [Accepted: 08/22/2015] [Indexed: 01/25/2023]  Open
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Comparative genome analysis reveals the molecular basis of nicotine degradation and survival capacities of Arthrobacter. Sci Rep 2015;5:8642. [PMID: 25721465 PMCID: PMC4342571 DOI: 10.1038/srep08642] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Accepted: 01/23/2015] [Indexed: 01/06/2023]  Open
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Degradation of residual lincomycin in fermentation dregs by yeast strain S9 identified as Galactomyces geotrichum. ANN MICROBIOL 2014. [DOI: 10.1007/s13213-014-0971-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]  Open
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Conversion of the Pseudomonas aeruginosa Quinolone Signal and Related Alkylhydroxyquinolines by Rhodococcus sp. Strain BG43. Appl Environ Microbiol 2014;80:7266-74. [PMID: 25239889 DOI: 10.1128/aem.02342-14] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2014] [Accepted: 09/11/2014] [Indexed: 11/20/2022]  Open
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Crystal structure analysis of EstA from Arthrobacter sp. Rue61a--an insight into catalytic promiscuity. FEBS Lett 2014;588:1154-60. [PMID: 24613918 DOI: 10.1016/j.febslet.2014.02.045] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2013] [Revised: 02/11/2014] [Accepted: 02/15/2014] [Indexed: 12/22/2022]
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Thierbach S, Bui N, Zapp J, Chhabra SR, Kappl R, Fetzner S. Substrate-assisted O2 activation in a cofactor-independent dioxygenase. ACTA ACUST UNITED AC 2014;21:217-25. [PMID: 24388758 DOI: 10.1016/j.chembiol.2013.11.013] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2013] [Revised: 11/22/2013] [Accepted: 11/27/2013] [Indexed: 11/29/2022]
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Genome Sequence of the Polyphosphate-Accumulating Organism Arthrobacter sp. Strain PAO19 Isolated from Maize Rhizosphere Soil. GENOME ANNOUNCEMENTS 2013;1:1/4/e00566-13. [PMID: 23908294 PMCID: PMC3731848 DOI: 10.1128/genomea.00566-13] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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The PaaX-type repressor MeqR2 of Arthrobacter sp. strain Rue61a, involved in the regulation of quinaldine catabolism, binds to its own promoter and to catabolic promoters and specifically responds to anthraniloyl coenzyme A. J Bacteriol 2012;195:1068-80. [PMID: 23275246 DOI: 10.1128/jb.01547-12] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]  Open
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