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Anyasi RO, Atagana HI. Understanding the effect of oil on phytoremediation of PCB co-contamination in transformer oil using Chromolaena odorata. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION 2021; 23:597-608. [PMID: 33556260 DOI: 10.1080/15226514.2020.1847031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Greenhouse assessment of the effect of oil on Chromolaena odorata ability to remove PCB from soil treated with transformer oil co-contaminated with Aroclor 1260 was done. Plants were transplanted into one kilogram of soil contained in 1 L pots differently containing 100, 200, and 500 ml of transformer oil (T/O), co-contaminated with 100 ppm of Aroclor. Treatments were done in two microcosms; direct contamination and soil cultured method. Measured plant growth parameters showed that C. odorata growth was affected by the different concentrations of oil. Inhibition of plant growth by oil increased with concentrations. At the end of six weeks, plant growth was affected in T/O amended soil. Plants size was increased by 1.4, 0.46 and -1.0% in direct treatment and 17.01, 6.09 and 1.08% in soil culture at the 100, 200 and 500 ppm respectively. Untreated control showed a 43.07% increase. Slight PCB recovery was observed in root tissues of C. odorata but soil PCB was reduced by 66.6, 53.2, 41.5% and 77.3, 74.7, 58.8% at both treatments in their respective concentrations of oil. However, unplanted control was reduced by 21.4 and 16.7% in the two treatments at 66,000 ppm of oil. This study has shown that with improved agronomic practices, there is a possibility of phytoremediation of soil PCB from PCB contained transformer oil contaminated soil using Chromolaena odorata, hence it should be optimized in the field.
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Affiliation(s)
- R O Anyasi
- Department of Environmental Sciences, Institute for Science and Technology Education, University of South Africa, Pretoria, South Africa
| | - H I Atagana
- Department of Environmental Sciences, Institute for Science and Technology Education, University of South Africa, Pretoria, South Africa
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2
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Germain J, Raveton M, Binet MN, Mouhamadou B. Screening and metabolic potential of fungal strains isolated from contaminated soil and sediment in the polychlorinated biphenyl degradation. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 208:111703. [PMID: 33396034 DOI: 10.1016/j.ecoenv.2020.111703] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2020] [Revised: 11/17/2020] [Accepted: 11/19/2020] [Indexed: 06/12/2023]
Abstract
Polychlorinated biphenyls (PCBs) are widespread persistent pollutants deleterious for environment and very dangerous for human kind. As the bioremediation of PCB polluted sites by model white-rot fungi is still unsatisfactory, the use of efficient native strains which have the natural capacity to develop on polluted sites may constitute a relevant alternative strategy. In this study, we isolated 12 fungal strains from PCB contaminated soil and sediment, improved the screening method to obtain the most efficient ones in biodegradation and detoxification of PCBs and characterized potential underlying enzymatic activities. Four strains Penicillium chrysogenum, P. citreosulfuratum, P. canescens and Aspergillus jensenii, showed remarkable biodegradation capacities, greater than 70%. The remaining PCB-toxicity of their culture, including that of Trametes versicolor and Acremonium sclerotigenum, which present interesting ecological and metabolic properties, was studied. Only P. canescens was able to significantly reduce the toxicity related to PCBs and their metabolites. The enzymatic activities induced by PCBs were different according to the strains, namely laccases in T. versicolor and peroxidases in Ac. sclerotigenum. Our promising results show that the use of native fungal strains can constitute an effective strategy in the depollution of PCB polluted sites.
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Affiliation(s)
- J Germain
- Laboratoire d'Ecologie Alpine, UMR 5553 CNRS/USMB Université Grenoble Alpes, 38058 Grenoble Cedex 9, France
| | - M Raveton
- Laboratoire d'Ecologie Alpine, UMR 5553 CNRS/USMB Université Grenoble Alpes, 38058 Grenoble Cedex 9, France
| | - M N Binet
- Laboratoire d'Ecologie Alpine, UMR 5553 CNRS/USMB Université Grenoble Alpes, 38058 Grenoble Cedex 9, France
| | - B Mouhamadou
- Laboratoire d'Ecologie Alpine, UMR 5553 CNRS/USMB Université Grenoble Alpes, 38058 Grenoble Cedex 9, France.
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Hu J, Wang Y, Su X, Yu C, Qin Z, Wang H, Hashmi MZ, Shi J, Shen C. Effects of RAMEB and/or mechanical mixing on the bioavailability and biodegradation of PCBs in soil/slurry. CHEMOSPHERE 2016; 155:479-487. [PMID: 27145422 DOI: 10.1016/j.chemosphere.2016.04.084] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2016] [Revised: 04/20/2016] [Accepted: 04/21/2016] [Indexed: 06/05/2023]
Abstract
Microbial remediation is preferred as a clean and cost-effective method for restoring environments polluted by organics. But the biodegradation rates of hydrophobic organic contaminants (HOCs) are usually extremely restricted by their low bioavailability, especially in soil. Here, a physical method (mechanical mixing) and a chemical method (randomly methylated-β-cyclodextrins, RAMEB) were adopted to improve the bioavailability and biodegradation of polychlorinated biphenyls (PCBs) of an aged soil. The bioavailability of tri-CBs was increased by adding RAMEB in soil/slurry or assisting mechanical mixing in slurry, but these methods had no effects on the bioavailability of tetra-CBs and high chlorinated PCBs (Cl > 4). The degradation rate of tri-CBs could be obviously enhanced by adding RAMEB in soil or assisting mechanical mixing in slurry. The highest removal amount of tri-CBs reached 43.8% in 100 d with a first-order decay kinetics constant of 0.0059 d(-1). But the removal of tetra-CBs and high chlorinated PCBs (Cl > 4) were not significant in all mesocosms, possibly due to the lack or weakness of the native degrading microflora. Based on the analysis of the richness and diversity of bacterial communities, the characteristics of the heatmap and the variation of bphC copy numbers in the soil/slurry mesocosms, it could be inferred that there was no obvious corresponding relationship between the variation of the bacterial communities and the physical/chemical measures.
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Affiliation(s)
- Jinxing Hu
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Yalin Wang
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Xiaomei Su
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Chunna Yu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, 311121, China
| | - Zhihui Qin
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Hui Wang
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Muhammad Z Hashmi
- Department of Meterology, Comsats Institute of Information Technology, Islamabad Campus, 44000, Pakistan
| | - Jiyan Shi
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Chaofeng Shen
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China.
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Hu J, Qian M, Zhang Q, Cui J, Yu C, Su X, Shen C, Hashmi MZ, Shi J. Sphingobium fuliginis HC3: a novel and robust isolated biphenyl- and polychlorinated biphenyls-degrading bacterium without dead-end intermediates accumulation. PLoS One 2015; 10:e0122740. [PMID: 25875180 PMCID: PMC4395236 DOI: 10.1371/journal.pone.0122740] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Accepted: 02/12/2015] [Indexed: 11/19/2022] Open
Abstract
Biphenyl and polychlorinated biphenyls (PCBs) are typical environmental pollutants. However, these pollutants are hard to be totally mineralized by environmental microorganisms. One reason for this is the accumulation of dead-end intermediates during biphenyl and PCBs biodegradation, especially benzoate and chlorobenzoates (CBAs). Until now, only a few microorganisms have been reported to have the ability to completely mineralize biphenyl and PCBs. In this research, a novel bacterium HC3, which could degrade biphenyl and PCBs without dead-end intermediates accumulation, was isolated from PCBs-contaminated soil and identified as Sphingobium fuliginis. Benzoate and 3-chlorobenzoate (3-CBA) transformed from biphenyl and 3-chlorobiphenyl (3-CB) could be rapidly degraded by HC3. This strain has strong degradation ability of biphenyl, lower chlorinated (mono-, di- and tri-) PCBs as well as mono-CBAs, and the biphenyl/PCBs catabolic genes of HC3 are cloned on its plasmid. It could degrade 80.7% of 100 mg L -1 biphenyl within 24 h and its biphenyl degradation ability could be enhanced by adding readily available carbon sources such as tryptone and yeast extract. As far as we know, HC3 is the first reported that can degrade biphenyl and 3-CB without accumulation of benzoate and 3-CBA in the genus Sphingobium, which indicates the bacterium has the potential to totally mineralize biphenyl/PCBs and might be a good candidate for restoring biphenyl/PCBs-polluted environments.
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Affiliation(s)
- Jinxing Hu
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Mingrong Qian
- Institute of Quality and Standard on Agricultural Products, Zhejiang Academy of Agricultural Sciences, Hangzhou, China
| | - Qian Zhang
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Jinglan Cui
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Chunna Yu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Xiaomei Su
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Chaofeng Shen
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Muhammad Z. Hashmi
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Jiyan Shi
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
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Mumbo J, Henkelmann B, Abdelaziz A, Pfister G, Nguyen N, Schroll R, Munch JC, Schramm KW. Persistence and dioxin-like toxicity of carbazole and chlorocarbazoles in soil. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:1344-1356. [PMID: 25142342 DOI: 10.1007/s11356-014-3386-6] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2014] [Accepted: 07/23/2014] [Indexed: 06/03/2023]
Abstract
Halogenated carbazoles have recently been detected in soil and water samples, but their environmental effects and fate are unknown. Eighty-four soil samples obtained from a site with no recorded history of pollution were used to assess the persistence and dioxin-like toxicity of carbazole and chlorocarbazoles in soil under controlled conditions for 15 months. Soil samples were divided into two temperature conditions, 15 and 20 °C, both under fluctuating soil moisture conditions comprising 19 and 44 drying-rewetting cycles, respectively. This was characterized by natural water loss by evaporation and rewetting to -15 kPa. Accelerated solvent extraction (ASE) and cleanup were performed after incubation. Identification and quantification were done using high-resolution gas chromatogram/mass spectrometer (HRGC/MS), while dioxin-like toxicity was determined by ethoxyresorufin-O-deethylase (EROD) induction in H4IIA rat hepatoma cells assay and multidimensional quantitative structure-activity relationships (mQSAR) modelling. Carbazole, 3-chlorocarbazole and 3,6-dichlorocarbazole were detected including trichlorocarbazole not previously reported in soils. Carbazole and 3-chlorocarbazole showed significant dissipation at 15 °C but not at 20 °C incubating conditions indicating that low temperature could be suitable for dissipation of carbazole and chlorocarbazoles. 3,6-Dichlorocarbazole was resistant at both conditions. Trichlorocarbazole however exhibited a tendency to increase in concentration with time. 3-Chlorocarbazole, 3,6-dibromocarbazole and selected soil extracts exhibited EROD activity. Dioxin-like toxicity did not decrease significantly with time, whereas the sum chlorocarbazole toxic equivalence concentrations (∑TEQ) did not contribute significantly to the soil assay dioxin-like toxicity equivalent concentrations (TCDD-EQ). Carbazole and chlorocarbazoles are persistent with the latter also toxic in natural conditions.
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Affiliation(s)
- John Mumbo
- German Research Center for Environmental Health, Molecular EXposomics (MEX), Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany
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Behera KK. Phytoremediation, Transgenic Plants and Microbes. SUSTAINABLE AGRICULTURE REVIEWS 2014. [DOI: 10.1007/978-3-319-00915-5_4] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Egorova DO, Demakov VA, Plotnikova EG. Bioaugmentation of a polychlorobiphenyl contaminated soil with two aerobic bacterial strains. JOURNAL OF HAZARDOUS MATERIALS 2013; 261:378-386. [PMID: 23973470 DOI: 10.1016/j.jhazmat.2013.07.067] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 07/16/2013] [Accepted: 07/29/2013] [Indexed: 06/02/2023]
Abstract
The consortium of aerobic bacterial strains Rhodococcus ruber P25 and Microbacterium sp. B51 was bioaugmented in natural and industrial soils, contaminated by commercial mixture of polychlorinated biphenyls (PCBs) Sovol. The results showed that the bioaugmentation of bacterial strains led to PCBs degradation in soil. Sovol at the initial concentration of about 100 mg kg(-1) was removed by 72.2% in the bioaugmented system with natural soil within 90 days, while the system with industrial soil removed 96.4% of this compound within the same period. The biodegradation kinetics of PCBs in the bioaugmented soil systems was not dependent on the presence of indigenous microflora. It was found that the growth dynamics of the strains R. ruber P25 and Microbacterium sp. B51 correlated with the specific degradation of Sovol. The strains R. ruber P25 and Microbacterium sp. B51 displayed high degradative activity to all congeners (ortho-, meta- and para-substituent) contained in Sovol. Removal percentage for each congeners amounted to 59-100% in the bioaugmented systems. This study suggests that augmentation of PCB-contaminated soils with strain R. ruber P25 and Microbacterium sp. B51 is promising in PCB bioremediation.
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Affiliation(s)
- D O Egorova
- Institute of Ecology and Genetics of Microorganisms, Ural Branch of RAS, Perm, Russia.
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Meggo RE, Schnoor JL. Rhizospere Redox Cycling and Implications for Rhizosphere Biotransformation of Selected Polychlorinated Biphenyl (PCB) Congeners. ECOLOGICAL ENGINEERING 2013; 57:285-292. [PMID: 24860241 PMCID: PMC4028954 DOI: 10.1016/j.ecoleng.2013.04.052] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Theoretically, sequential cycles of dechlorination followed by aerobic bio-oxidation are desirable to achieve complete degradation of a mixture of higher and lower chlorinated PCBs. In this research, soil was artificially contaminated with polychlorinated biphenyls (PCBs) in mixture and as single congeners, aged, and planted with two different plant species. Alternating redox cycles were created in the root zone of plants by flooding and draining the soil. Over 32 weeks, switchgrass (Panicum virgatum) and poplar (Populus deltoids x nigra DN34) planted systems that were exposed to alternate cycles of flooding performed better in reducing parent PCBs than planted systems that were not cycled (p<0.05). The cycled systems also had a higher mass of PCB transformation products than the uncycled systems. Multiple cycles were necessary to achieve significant differences between the cycled and uncycled treatments.
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Affiliation(s)
- Richard E. Meggo
- Department of Civil and Environmental Engineering, 4105 Seamans Center, University of Iowa, IA, 52242, USA, Phone: 319-594-4263; Fax: 319-335-5660
| | - Jerald L. Schnoor
- Department of Civil and Environmental Engineering, 4105 Seamans Center, University of Iowa, IA, 52242, USA
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Xiong F, Shuai JJ, Jin XF, Zhang J, Sun J, Peng RH, Yao QH, Xiong AS. Expression and characterization of a recombinant 2,3-dihydroxybiphenyl-1,2-dioxygenase from Pseudomonas. Mol Cell Toxicol 2013. [DOI: 10.1007/s13273-012-0046-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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10
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Federici E, Giubilei M, Santi G, Zanaroli G, Negroni A, Fava F, Petruccioli M, D'Annibale A. Bioaugmentation of a historically contaminated soil by polychlorinated biphenyls with Lentinus tigrinus. Microb Cell Fact 2012; 11:35. [PMID: 22443185 PMCID: PMC3331830 DOI: 10.1186/1475-2859-11-35] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2012] [Accepted: 03/23/2012] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Several species belonging to the ecological group of white-rot basidiomycetes are able to bring about the remediation of matrices contaminated by a large variety of anthropic organic pollutants. Among them, polychlorobiphenyls (PCBs) are characterized by a high recalcitrance due to both their low bioavailability and the inability of natural microbial communities to degrade them at significant rates and extents. Objective of this study was to assess the impact of a maize stalk-immobilized Lentinus tigrinus CBS 577.79 inoculant combined with soybean oil (SO), as a possible PCB-mobilizing agent, on the bioremediation and resident microbiota of an actual Aroclor 1260 historically contaminated soil under unsaturated solid-phase conditions. RESULTS Best overall PCB depletions (33.6 ± 0.3%) and dechlorination (23.2 ± 1.3%) were found after 60 d incubation in the absence of SO where, however, the fungus appeared to exert adverse effects on both the growth of biphenyl- and chlorobenzoate-degrading bacteria and the abundance of genes coding for both biphenyl dioxygenase (bph) and catechol-2,3-dioxygenase. A significant (P < 0.001) linear inverse relationship between depletion yields and degree of chlorination was observed in both augmented and control microcosms in the absence of SO; conversely, this negative correlation was not evident in SO-amended microcosms where the additive inhibited the biodegradation of low chlorinated congeners. The presence of SO, in fact, resulted in lower abundances of both biphenyl-degrading bacteria and bph. CONCLUSIONS The PCB depletion extents obtained in the presence of L. tigrinus are by far higher than those reported in other remediation studies conducted under unsaturated solid phase conditions on actual site soils historically contaminated by Aroclor 1260. These results suggest that the bioaugmentation strategy with the maize stalk-immobilized mycelium of this species might be promising in the reclamation of PCB-contaminated soils. The addition of SO to matrices contaminated by technical PCB mixtures, such as Aroclor 1242 and Delor 103 and characterized by a large preponderance of low chlorinated congeners, might not be advisable.
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Affiliation(s)
- Ermanno Federici
- Department of Cellular and Environmental Biology, University of Perugia, Perugia, Italy
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Frassinetti S, Barberio C, Caltavuturo L, Fava F, Di Gioia D. Genotoxicity of 4-nonylphenol and nonylphenol ethoxylate mixtures by the use of Saccharomyces cerevisiae D7 mutation assay and use of this text to evaluate the efficiency of biodegradation treatments. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2011; 74:253-258. [PMID: 21087794 DOI: 10.1016/j.ecoenv.2010.10.039] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2010] [Revised: 10/21/2010] [Accepted: 10/25/2010] [Indexed: 05/30/2023]
Abstract
Nonylphenol ethoxylates (NPnEOs, where n is the number of ethoxylic units in the molecule) are non-ionic surfactants widely used for domestic and industrial purposes. 4-Nonylphenol (4-NP), the main product of NPnEO biodegradation, is a toxic xenobiotic compound classified as endocrine disrupter. While numerous studies reported the toxicity and oestrogenic activity of nonylphenols, little is known about the mutagenicity of these compounds. In this paper, the genotoxicity of 4-NP and NPnEO mixtures was evaluated by using the D7 strain of Saccharomyces cerevisiae as experimental model. The same genotoxicity tests were applied to effluents deriving from experimental packed-bed bioreactors, developed for the treatment of NPnEO contaminated wastewater, in order to evaluate the residual genotoxic potential with respect to the influent waste. The target compounds fed to the bioreactors were 4-NP and NPnEO mixtures possessing an average of 5 or 1.5 ethoxylic units (Igepal CO-520 and Igepal CO-210, respectively). The results showed that 4-NP induced significant cytotoxic effect on S. cerevisiae cells at 50 mg/L, as well as mutagenic effects at the lowest tested concentrations (12 and 25 mg/L). 4-NP was the most genotoxic compound among those assayed, followed by Igepal CO-210, whereas Igepal CO-520 did not induce genotoxicity at any of the assayed concentrations. The genotoxic effects of 4-NP on yeast cells disappeared after the treatment of 4-NP artificially contaminated water in the bioreactor. This indicates that the biological treatment is capable of removing not only the pollutant, but also the toxicity associated to the compound and its degradation metabolites. This study represents, to the best of our knowledge, the first report that evaluates the genotoxicity of both 4-NP, NPnEOs and their potential aerobic degradation products on an eukaryotic organism. The obtained results suggest that the S. cerevisiae D7 strain is a very effective model microorganism to study the induction of genotoxic damage by the compounds under study. Moreover, this yeast assay has been proved effective to evaluate the detoxification effect deriving from biotreatment processes.
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Affiliation(s)
- Stefania Frassinetti
- National Research Council, Institute of Biology and Agricultural Biotechnology (IBBA), Pisa Unit, Research Area of Pisa, Via Moruzzi 1, 56124, Pisa, Italy.
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Abstract
Diatom inspired bio-hybrids offer new possibilities for the synthesis of nanostructured materials and the development of nanomedicine.
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Affiliation(s)
- Nadine Nassif
- Chimie de la matière condensée de Paris
- CNRS
- UPMC
- 75231 Paris Cedex 05
- France
| | - Jacques Livage
- Chimie de la matière condensée de Paris
- CNRS
- UPMC
- 75231 Paris Cedex 05
- France
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Xiong F, Shuai JJ, Peng RH, Tian YS, Zhao W, Yao QH, Xiong AS. Expression, purification and functional characterization of a recombinant 2,3-dihydroxybiphenyl-1,2-dioxygenase from Rhodococcus rhodochrous. Mol Biol Rep 2010; 38:4303-8. [PMID: 21113668 DOI: 10.1007/s11033-010-0554-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2010] [Accepted: 11/17/2010] [Indexed: 11/28/2022]
Abstract
A 2,3-dihydroxybiphenyl (2,3-DHBP) dioxygenase gene from a Rhodococcus sp. strain, named RrbphCI and involved in the degradation of polychlorinated biphenyls (PCBs), was synthesized. RrbphCI was expressed in Escherichia coli and its encoded enzyme was purified. SDS-PAGE analysis indicated that the size of the protein encoded by RrbphCI was about 32 kDa. The activity of the 2,3-DHBP dioxygenase was 82.8 U/mg when the substrate was 2,3-DHBP, with optimum pH 8.0 at 30°C, and optimum temperature was 40°C at pH 8.0. The RrbphCI gene was transformed into Pseudomonas putida strain EG11, to determine the ability of the enzyme to degrade 2,3-DHBP. The wild type EG11 degraded 61.86% of supplied 2,3-DHBP and the transformed EG11 (hosting the RrbphCI gene) utilized 52.68% after 2 min of treatment at 30°C. The overexpressed and purified enzyme was able to degrade 2,3-DHBP. The 2,3-DHBP dioxygenase is a key enzyme in the PCB degradation pathway. RrbphCI and its encoded 2,3-DHBP dioxygenase may have transgenic applications in bioremediation of PCBs.
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Affiliation(s)
- Fei Xiong
- Shanghai Key Laboratory of Agricultural Genetics and Breeding, Biotechnological Research Institute, Shanghai Academy of Agricultural Sciences, 2901 Beidi Rd, 201106 Shanghai, China
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Zhao LJ, Jia YH, Zhou JT, Li A, Chen JF. Dynamics of augmented soil system containing biphenyl with Dyellaginsengisoli LA-4. JOURNAL OF HAZARDOUS MATERIALS 2010; 179:729-734. [PMID: 20381236 DOI: 10.1016/j.jhazmat.2010.03.062] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2010] [Revised: 02/18/2010] [Accepted: 03/13/2010] [Indexed: 05/29/2023]
Abstract
One high efficient biphenyl-degrading strain Dyella ginsengisoli LA-4 was inoculated into biphenyl-contaminated soil for bioaugmentation in this study. The results showed that bioaugmentation could accelerate the startup period of the biphenyl bioremediation process compared with the non-augmented one. PCR-DGGE fingerprints demonstrated that both of the diversity and pattern of microbial community were affected by the addition of strain LA-4 and biphenyl. Biphenyl-utilizing populations gradually increased and become the dominant species. The introduced strain LA-4 could be persistent and co-exist well with the indigenous populations. However, both of the strain LA-4 and indigenous microorganisms in the bioaugmented system would be partially inhibited by Zn(2+) and Ni(2+). This study suggests that it is feasible and potentially useful to remediate biphenyl-contaminated soil using bioaugmentation with D. ginsengisoli LA-4.
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Affiliation(s)
- Li-jun Zhao
- School of Chemical Engineering, China University of Petroleum, Beijing 102249, China.
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Zanaroli G, Di Toro S, Todaro D, Varese GC, Bertolotto A, Fava F. Characterization of two diesel fuel degrading microbial consortia enriched from a non acclimated, complex source of microorganisms. Microb Cell Fact 2010; 9:10. [PMID: 20158909 PMCID: PMC2830956 DOI: 10.1186/1475-2859-9-10] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2009] [Accepted: 02/16/2010] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND The bioremediation of soils impacted by diesel fuels is very often limited by the lack of indigenous microflora with the required broad substrate specificity. In such cases, the soil inoculation with cultures with the desired catabolic capabilities (bioaugmentation) is an essential option. The use of consortia of microorganisms obtained from rich sources of microbes (e.g., sludges, composts, manure) via enrichment (i.e., serial growth transfers) on the polluting hydrocarbons would provide bioremediation enhancements more robust and reproducible than those achieved with specialized pure cultures or tailored combinations (co-cultures) of them, together with none or minor risks of soil loading with unrelated or pathogenic allocthonous microorganisms. RESULTS In this work, two microbial consortia, i.e., ENZ-G1 and ENZ-G2, were enriched from ENZYVEBA (a complex commercial source of microorganisms) on Diesel (G1) and HiQ Diesel (G2), respectively, and characterized in terms of microbial composition and hydrocarbon biodegradation capability and specificity. ENZ-G1 and ENZ-G2 exhibited a comparable and remarkable biodegradation capability and specificity towards n-C10 to n-C24 linear paraffins by removing about 90% of 1 g l-1 of diesel fuel applied after 10 days of aerobic shaken flask batch culture incubation at 30 degrees C. Cultivation dependent and independent approaches evidenced that both consortia consist of bacteria belonging to the genera Chryseobacterium, Acinetobacter, Psudomonas, Stenotrophomonas, Alcaligenes and Gordonia along with the fungus Trametes gibbosa. However, only the fungus was found to grow and remarkably biodegrade G1 and G2 hydrocarbons under the same conditions. The biodegradation activity and specificity and the microbial composition of ENZ-G1 and ENZ-G2 did not significantly change after cryopreservation and storage at -20 degrees C for several months. CONCLUSIONS ENZ-G1 and ENZ-G2 are very similar highly enriched consortia of bacteria and a fungus capable of extensively degrading a broad range of the hydrocarbons mainly composing diesel fuels. Given their remarkable biodegradation potential, stability and resistance to cryopreservation, both consortia appear very interesting candidates for bioaugmentation operations on Diesel fuel impacted soils and sites.
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Affiliation(s)
- Giulio Zanaroli
- DICASM, Faculty of Engineering, University of Bologna, via Terracini 28, 40131 Bologna, Italy
| | - Sara Di Toro
- DICASM, Faculty of Engineering, University of Bologna, via Terracini 28, 40131 Bologna, Italy
- MARCOPOLO ENGINEERING Spa, via XI Settembre 37, 12011 Borgo San Dalmazzo (CN), Italy
| | - Daniela Todaro
- MARCOPOLO ENGINEERING Spa, via XI Settembre 37, 12011 Borgo San Dalmazzo (CN), Italy
| | - Giovanna C Varese
- Department of Plant Biology, University of Torino, Viale Mattioli 25, 10125 Torino, Italy
| | - Antonio Bertolotto
- MARCOPOLO ENGINEERING Spa, via XI Settembre 37, 12011 Borgo San Dalmazzo (CN), Italy
| | - Fabio Fava
- DICASM, Faculty of Engineering, University of Bologna, via Terracini 28, 40131 Bologna, Italy
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Tigini V, Prigione V, Di Toro S, Fava F, Varese GC. Isolation and characterisation of polychlorinated biphenyl (PCB) degrading fungi from a historically contaminated soil. Microb Cell Fact 2009; 8:5. [PMID: 19138404 PMCID: PMC2636759 DOI: 10.1186/1475-2859-8-5] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2008] [Accepted: 01/12/2009] [Indexed: 12/03/2022] Open
Abstract
Background Polychlorinated biphenyls (PCBs) are widespread toxic pollutants. Bioremediation might be an effective, cost competitive and environment-friendly solution for remediating environmental matrices contaminated by PCBs but it is still unsatisfactory, mostly for the limited biodegradation potential of bacteria involved in the processes. Very little is known about mitosporic fungi potential in PCB bioremediation and their occurrence in actual site historically contaminated soils. In the present study, we characterised the native mycoflora of an aged dump site soil contaminated by about 0.9 g kg-1 of Aroclor 1260 PCBs and its changing after aerobic biotreatment with a commercial complex source of bacteria and fungi. Fungi isolated from the soil resulting from 120 days of treatment were screened for their ability to adsorb or metabolise 3 target PCBs. Results The original contaminated soil contained low loads of few fungal species mostly belonging to the Scedosporium, Penicillium and Aspergillus genera. The fungal load and biodiversity generally decreased throughout the aerobic treatment. None of the 21 strains isolated from the treated soil were able to grow on biphenyl (200 mg L-1) or a mixture of 2-chlorobiphenyl, 4,4'-dichlorobiphenyl and 2,2',5,5'-tetrachlorobiphenyl (20 mg L-1 each) as sole carbon sources. However, 16 of them grew in a mineral medium containing the same PCBs mixture and glucose (10 g L-1). Five of the 6 isolates, which displayed the faster and more extensive growth under the latter conditions, were found to degrade the 3 PCBs apparently without the involvement of ligninolytic enzymes; they were identified as Penicillium chrysogenum, Scedosporium apiospermum, Penicillium digitatum and Fusarium solani. They are the first PCB degrading strains of such species reported so far in the literature. Conclusion The native mycoflora of the actual site aged heavily contaminated soil was mainly constituted by genera often reported as able to biodegrade organopollutants. It was generally remarkably reduced after the biotreatment, which however resulted in the selection of few mitosporic fungal species able to biodegrade PCBs. This is the first study in which an extensive characterisation of the cultivable indigenous mycoflora of an actual site aged PCB contaminated soil, as well as its changes upon soil bioremediation treatment, was conducted. Moreover, this is the first paper in which 5 strains ascribable to 4 mitosporic species able to biodegrade PCB are reported in the literature.
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Affiliation(s)
- Valeria Tigini
- Department of Plant Biology, University of Turin, viale Mattioli 25, 10125 Turin, Italy.
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Occulti F, Roda GC, Berselli S, Fava F. Sustainable decontamination of an actual-site aged PCB-polluted soil through a biosurfactant-based washing followed by a photocatalytic treatment. Biotechnol Bioeng 2008; 99:1525-34. [PMID: 17969134 DOI: 10.1002/bit.21703] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
A two phases process consisting of a soya lecithin (SL)-based soil washing process followed by the photocatalytic treatment of resulting effluents was developed and applied at the laboratory scale in the remediation of an actual-site soil historically contaminated by 0.65 g/kg of polychlorinated biphenyls (PCBs). Triton X-100 (TX) was employed in the same process as a control surfactant. SL and TX, both applied as 2.25 g/L aqueous solutions, displayed a comparable ability to remove PCBs from the soil. However, SL solution displayed a lower ecotoxicity, a lower ability to mobilize soil constituents and a higher soil detoxification capacity with respect to the TX one. The photocatalytic treatment resulted in marked depletions (from 50% to 70%) of total organic carbon (TOC) and PCBs initially occurring in the SL and TX contaminated effluents. Despite the ability of SL to adversely affect the rate of TOC and PCB photodegradation, higher PCB depletion and dechlorination yields along with lower increases of ecotoxicity were observed in SL-containing effluents with respect to the TX ones at the end of 15 days of treatment. The two phases process developed and tested for the first time in this study seems to have the required features to become, after a proper optimization and scale up, a challenging procedure for the sustainable remediation of actual site, poorly biotreatable PCB-contaminated soils.
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Affiliation(s)
- Fabio Occulti
- DICASM, Faculty of Engineering, University of Bologna, Bologna, Italy
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Robles-González IV, Fava F, Poggi-Varaldo HM. A review on slurry bioreactors for bioremediation of soils and sediments. Microb Cell Fact 2008; 7:5. [PMID: 18312630 PMCID: PMC2292675 DOI: 10.1186/1475-2859-7-5] [Citation(s) in RCA: 121] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2007] [Accepted: 02/29/2008] [Indexed: 11/16/2022] Open
Abstract
The aim of this work is to present a critical review on slurry bioreactors (SB) and their application to bioremediation of soils and sediments polluted with recalcitrant and toxic compounds. The scope of the review encompasses the following subjects: (i) process fundamentals of SB and analysis of advantages and disadvantages; (ii) the most recent applications of SB to laboratory scale and commercial scale soil bioremediation, with a focus on pesticides, explosives, polynuclear aromatic hydrocarbons, and chlorinated organic pollutants; (iii) trends on the use of surfactants to improve availability of contaminants and supplementation with degradable carbon sources to enhance cometabolism of pollutants; (iv) recent findings on the utilization of electron acceptors other than oxygen; (v) bioaugmentation and advances made on characterization of microbial communities of SB; (vi) developments on ecotoxicity assays aimed at evaluating bioremediation efficiency of the process.From this review it can be concluded that SB is an effective ad situ and ex situ technology that can be used for bioremediation of problematic sites, such as those characterized by soils with high contents of clay and organic matter, by pollutants that are recalcitrant, toxic, and display hysteretic behavior, or when bioremediation should be accomplished in short times under the pressure and monitoring of environmental agencies and regulators. SB technology allows for the convenient manipulation and control of several environmental parameters that could lead to enhanced and faster treatment of polluted soils: nutrient N, P and organic carbon source (biostimulation), inocula (bioaugmentation), increased availability of pollutants by use of surfactants or inducing biosurfactant production inside the SB, etc. An interesting emerging area is the use of SB with simultaneous electron acceptors, which has demonstrated its usefulness for the bioremediation of soils polluted with hydrocarbons and some organochlorinated compounds. Characterization studies of microbial communities of SB are still in the early stages, in spite of their significance for improving reactor operation and design optimization.We have identified the following niches of research needs for SB in the near and mid term future, inter alia: (i) application of SB with sequential and simultaneous electron acceptors to soils polluted with contaminants other than hydrocarbons (i.e., pesticides, explosives, etc.), (ii) evaluation of the technical feasibility of triphasic SB that use innocuous solvents to help desorbing pollutants strongly attached to soils, and in turn, to enhance their biodegradation, (iii) gaining deeper insight of microbial communities present in SB with the intensified application of molecular biology tools such as PCR-DGGE, PCR-TGGE, ARDRA, etc., (iv) development of more representative ecotoxicological assays to better assess the effectiveness of a given bioremediation process.
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Affiliation(s)
- Ireri V Robles-González
- CINVESTAV-IPN, Environmental Biotechnology R&D Group, Dept. Biotechnology and Bioengineering, México D.F., México
| | - Fabio Fava
- Alma Mater Studiorum-University of Bologna; Faculty of Engineering, Viale Risorgimento, 2. 40136. Bologna, Italy
| | - Héctor M Poggi-Varaldo
- CINVESTAV-IPN, Environmental Biotechnology R&D Group, Dept. Biotechnology and Bioengineering, México D.F., México
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Machín-Ramírez C, Okoh AI, Morales D, Mayolo-Deloisa K, Quintero R, Trejo-Hernández MR. Slurry-phase biodegradation of weathered oily sludge waste. CHEMOSPHERE 2008; 70:737-44. [PMID: 17659320 DOI: 10.1016/j.chemosphere.2007.06.017] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2007] [Revised: 06/05/2007] [Accepted: 06/07/2007] [Indexed: 05/16/2023]
Abstract
We assessed the biodegradation of a typical oily sludge waste (PB401) in Mexico using several regimes of indigenous microbial consortium and relevant bioremediation strategies in slurry-phase system. Abiotic loss of total petroleum hydrocarbons (TPH) in the PB401 was insignificant, and degradation rates under the various treatment conditions ranged between 666.9 and 2168.7 mg kg(-1) day(-1) over a 15 days reaction period, while viable cell count peaked at between log(10)5.7 and log(10)7.4 cfu g(-1). Biostimulation with a commercial fertilizer resulted in 24% biodegradation of the TPH in the oily waste and a corresponding peak cell density of log(10)7.4 cfu g(-1). Addition of non-indigenous adapted consortium did not appear to enhance the removal of TPH from the oily waste. It would appear that the complexities of the components of the alkylaromatic fraction of the waste limited biodegradation rate even in a slurry system.
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Affiliation(s)
- C Machín-Ramírez
- Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Cuernavaca, C.P. 62209, Mexico
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