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Guedri MM, Krir N, Terol CC, Romdhane M, Boulila A, Guetat A. Phytochemical Analysis, Acetylcholinesterase Inhibition, Antidiabetic and Antioxidant Activities of Atriplex halimus L. (Amaranthaceae Juss.). Chem Biodivers 2024; 21:e202301941. [PMID: 38224199 DOI: 10.1002/cbdv.202301941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2023] [Revised: 01/13/2024] [Accepted: 01/14/2024] [Indexed: 01/16/2024]
Abstract
Mediterranean saltbush Atriplex halimus L. (Amaranthaceae) from different bioclimatic arid zones (ten wild populations) were studied. Phenols contents, flavonoids, flavonols, tannins and anthocyanins were determined and then tested for their antioxidants, antidiabetic and anti-acetylcholinesterase (AChE) activities. Levels of total polyphenols including flavonoids and flavonols, tannins and anthocyanins were high and varied significantly among analyzed populations. Nine phenolic acids and four flavonoids were identified for the first time in the methanolic fraction and quantified by liquid high-performance chromatography system HPLC (DAD). All extracts showed a substantial antioxidant activity, as assessed by DPPH assay (1,1-diphenyl-2-picrylhydrazyl free radical) (IC50DPPH=147.3for population of Seliena), Ferric Reducing Antioxidant Power (FRAP; IC50FRAP=3.2 for populations of Sousse and Kairouan), and Chelation Fer test (IC50FerCh=1.5 μg/mL for populations of El-hamma and Mednine). Atriplex halimus possessed a high inhibitory effect against α-amylase activity (up to 2.6 mg ACE/gE), a moderate activity for α-glucosidase (up to 91.0 mg ACE/gE) and AChE (up to 147.2 μg/mL) compared to standard. The analyzed populations were isolated and subdivided into three distinct groups, without any bioclimatic structuration. Enzymatic activities seem to be associated with the presence, in plant extracts, of other classes of compounds then phenols such as terpenes, sterols, saponins, coumarins and carotenoids.
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Affiliation(s)
- Mounira Mkaddem Guedri
- Laboratory of Energy, Water, Environment and Process, LR18ES35), National Engineering School of Gabes, University of Gabes, Zrig Eddakhlania, 6072, Gabes, Tunisia
- Omar elkhattab city-, ZRIG-6029, Gabes, Tunisia
| | - Nouha Krir
- Laboratory of Energy, Water, Environment and Process, LR18ES35), National Engineering School of Gabes, University of Gabes, Zrig Eddakhlania, 6072, Gabes, Tunisia
- Omar elkhattab city-, ZRIG-6029, Gabes, Tunisia
| | - Carolina Clausell Terol
- Départamento de Ingeniería Química, Instituto Universitario de Tecnología Cerámica, Universitat Jaume I, 12071, Castellón, Spain
| | - Mehrez Romdhane
- Laboratory of Energy, Water, Environment and Process, LR18ES35), National Engineering School of Gabes, University of Gabes, Zrig Eddakhlania, 6072, Gabes, Tunisia
- Omar elkhattab city-, ZRIG-6029, Gabes, Tunisia
| | - Abdennacer Boulila
- Laboratory of Natural Substances LR10INRAP02, National Institute of Research and Physico-Chemical Analyses, Biotechpole of Sidi Thabet, Ariana, Tunisia
| | - Arbi Guetat
- Northern Border University, College of Sciences, Department of Biological Sciences, Arar, Saudi Arabia
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2
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Tiddy IC, Schneider K, Elmer KR. Environmental correlates of adaptive diversification in postglacial freshwater fishes. JOURNAL OF FISH BIOLOGY 2024; 104:517-535. [PMID: 37984834 DOI: 10.1111/jfb.15621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 11/14/2023] [Accepted: 11/15/2023] [Indexed: 11/22/2023]
Abstract
Determining how environmental conditions contribute to divergence among populations and drive speciation is fundamental to resolving mechanisms and understanding outcomes in evolutionary biology. Postglacial freshwater fish species in the Northern Hemisphere are ideal biological systems to explore the effects of environment on diversification in morphology, ecology, and genetics (ecomorph divergences) within lakes. To date, various environmental factors have been implicated in the presence of multiple ecomorphs within particular lakes or regions. However, concerted evidence for generalizable patterns in environmental variables associated with speciation across geographical regions and across species and genera has been lacking. Here, we aimed to identify key biotic and abiotic factors associated with ecological divergence of postglacial freshwater fish species into multiple sympatric ecomorphs, focusing on species in the well-studied, widespread, and co-distributed genera Gasterosteus, Salvelinus, and Coregonus (stickleback, charr, and whitefish, respectively). We found that the presence of multiple sympatric ecomorphs tended to be associated with increasing lake surface area, maximum depth, and nutrient availability. In addition, predation, competition, and prey availability were suggested to play a role in divergence into multiple ecomorphs, but the effects of biotic factors require further study. Although we identified several environmental factors correlated with the presence of multiple ecomorphs, there were substantial data gaps across species and regions. An improved understanding of these systems may provide insight into both generalizable environmental factors involved in speciation in other systems, and potential ecological and evolutionary responses of species complexes when these variables are altered by environmental change.
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Affiliation(s)
- Isabelle C Tiddy
- School of Biodiversity, One Health & Veterinary Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
| | - Kevin Schneider
- School of Biodiversity, One Health & Veterinary Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
| | - Kathryn R Elmer
- School of Biodiversity, One Health & Veterinary Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
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3
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Genetic Variability, Population Structure, and Relatedness Analysis of Meagre Stocks as an Informative Basis for New Breeding Schemes. FISHES 2021. [DOI: 10.3390/fishes6040078] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
This study evaluates the genetic diversity of different meagre broodstocks sampled in Greece. A multiplex of twelve microsatellite markers was used to genotype 946 fish from eleven stocks and batches used for broodstock selection, and the genetic data was used to calculate genetic population parameters as well as to investigate the genetic differentiation between stocks. The results from a relatedness analysis were used as the guiding lines for a fine-tuned and overall evaluation of the genetic distance between stocks, and the choice of candidate breeders from some of them. The approach implemented in this study uses well-established population genetics methods to evaluate the selection of breeder candidates in aquaculture commercial conditions utilizing a descriptive genetic data set based on microsatellite analyses, and to outline an efficient methodology for establishing the basis of new breeding schemes.
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Gargan PG, Økland F, Shephard S, Fitzgerald C, O'Grady M. The spawning location of vulnerable ferox trout (Salmo trutta L.) in the Lough Corrib and Lough Mask catchments, Western Ireland. JOURNAL OF FISH BIOLOGY 2021; 98:485-497. [PMID: 33064311 DOI: 10.1111/jfb.14593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Revised: 10/05/2020] [Accepted: 10/14/2020] [Indexed: 06/11/2023]
Abstract
Ferox trout are large, long-lived, piscivorous trout normally found in deep lakes; they are highly prized by trophy anglers. Lough Corrib and Lough Mask, Western Ireland, have recorded the majority of Irish specimen ferox trout since angling records began. Little was known regarding the spawning location of ferox trout relative to sympatric brown trout, and a radio telemetry study was initiated in both catchments in 2005. Over the period 2005-2009, 79 ferox were captured by angling and radio tagged in Lough Corrib, while 55 ferox were tagged in Lough Mask. Manual and helicopter tracking were carried out on all spawning streams entering both lakes over the autumn/winter period to detect tagged fish. Overall, 37 radio-tagged trout (46.8%) were detected in Lough Corrib streams and 21 tagged trout (38.2%) were recorded from Lough Mask streams. Results from radio tracking indicate that the majority (92%) of ferox trout tagged in Lough Corrib spawned in a single spawning stream, the Cong river, while the majority (76%) of ferox trout tagged in Lough Mask spawned in the Cong canal and Cong river. These results suggest that these streams are most likely the principle spawning locations of ferox trout in both lakes. The occurrence of ferox trout predominantly in single spawning rivers in both catchments highlights the vulnerability of the study ferox populations. As a result of these findings, conservation measures were introduced for ferox trout in both catchments.
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Affiliation(s)
| | - Finn Økland
- Norwegian Institute for Nature Research (NINA), Trondheim, Norway
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5
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Rhode C, Badenhorst R, Hull KL, Greenwood MP, Bester-van der Merwe AE, Andere AA, Picard CJ, Richards C. Genetic and phenotypic consequences of early domestication in black soldier flies (Hermetia illucens). Anim Genet 2020; 51:752-762. [PMID: 32524667 DOI: 10.1111/age.12961] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/11/2020] [Indexed: 01/18/2023]
Abstract
The black soldier fly, Hermetia illucens, is an emerging biotechnological agent with its larvae being effective converters of organic waste into usable bio-products including protein and lipids. To date, most operations use unimproved commercial populations produced by mass rearing, without cognisance of specific breeding strategies. The genetic and phenotypic consequences of these commercial practices remain unknown and could have a significant impact on long-term population viability and productivity. The aim of this study was thus to assess the genetic and phenotypic changes during the early phases of colony establishment and domestication in the black soldier fly. An experimental colony was established from wild founder flies and a new microsatellite marker panel was developed to assess population genetic parameters along with the phenotypic characteristics of each generational cohort under captive breeding. The experimental colony was characterised by a small effective population size, subsequent loss of genetic diversity and rapid genetic and phenotypic differentiation between the generational cohorts. Ultimately, the population collapsed by the fifth generation, most likely owing to the adverse effect of inbreeding depression following the fixation of deleterious alleles. Species with r-selected life history characteristics (e.g. short life-span, high fecundity and low larval survival) are known to pose particular challenges for genetic management. The current study suggests that sufficient genetic and phenotypic variations exist in the wild population and that domestication and strain development could be achieved with careful population augmentation and selection during the early stages of colony establishment.
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Affiliation(s)
- C Rhode
- Department of Genetics, Stellenbosch University, Private Bag X1, Matieland, 7602, South Africa
| | - R Badenhorst
- Department of Genetics, Stellenbosch University, Private Bag X1, Matieland, 7602, South Africa.,AgriProtein Holdings Ltd, 1 Farnham Road, Guildford, Surrey, GU2 4RG, UK
| | - K L Hull
- Department of Genetics, Stellenbosch University, Private Bag X1, Matieland, 7602, South Africa
| | - M P Greenwood
- Department of Genetics, Stellenbosch University, Private Bag X1, Matieland, 7602, South Africa
| | | | - A A Andere
- Department of Biology, Purdue School of Science, Indiana University - University of Purdue Indianapolis, SL 306, 723 W Michigan Street, Indianapolis, IN, 46202, USA
| | - C J Picard
- Department of Biology, Purdue School of Science, Indiana University - University of Purdue Indianapolis, SL 306, 723 W Michigan Street, Indianapolis, IN, 46202, USA
| | - C Richards
- AgriProtein Holdings Ltd, 1 Farnham Road, Guildford, Surrey, GU2 4RG, UK
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Effects of genetic origin on phenotypic divergence in Brook Trout populations stocked with domestic fish. Ecosphere 2020. [DOI: 10.1002/ecs2.3119] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
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Morissette O, Sirois P, Wilson CC, Laporte M, Bernatchez L. The role of ecotype-environment interactions in intraspecific trophic niche partitioning subsequent to stocking. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2019; 29:e01857. [PMID: 30680837 DOI: 10.1002/eap.1857] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Revised: 12/18/2018] [Accepted: 01/03/2019] [Indexed: 06/09/2023]
Abstract
Worldwide, stocking of fish represents a valuable tool for conservation and maintenance of species exploited by recreational fishing. Releases of hatchery-reared fish are more and more recognized to have numerous demographic, ecological, and genetic impacts on wild populations. However, consequences on intraspecific trophic relationships have rarely been investigated. In this study, we assessed the impacts of supplementation stocking and resulting introgressive hybridization on the trophic niches occupied by stocked, local, and hybrid lake trout (Salvelinus namaycush) within populations of piscivorous and planktivorous ecotypes stocked from a wild piscivorous source population. We compared trophic niches using stable isotope analysis (δ13 C and δ15 N) and trophic position among the three genetic origins. Putative genetic effects were tested with phenotype-genotype association of "life history" ecological traits (body size, growth rate, condition index, and trophic niche) and genotypes (RADseq SNP markers) using redundant discriminant analysis (RDA). Results showed that sympatry resulting from the stocking of contrasting ecotypes is a risk factor for niche partitioning. Planktivorous populations are more susceptible to niche partitioning, by competitive exclusion of the local fish from a littoral niche to an alternative pelagic/profundal niche. Observed niche partitioning is probably a manifestation of competitive interactions between ecotypes. Our results emphasize that ecotypic variation should be considered for more efficient management and conservation practices and in order to mitigate negative impact of supplementation stocking.
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Affiliation(s)
- O Morissette
- Institut de Biologie Intégrative des Systèmes (IBIS), Université Laval, Québec, Quebec, G1V0A6, Canada
- Chaire de recherche sur les espèces aquatiques exploitées, Laboratoire des sciences aquatiques, Département des sciences fondamentales, Université du Québec à Chicoutimi, Chicoutimi, Quebec, G7H2B1, Canada
| | - P Sirois
- Chaire de recherche sur les espèces aquatiques exploitées, Laboratoire des sciences aquatiques, Département des sciences fondamentales, Université du Québec à Chicoutimi, Chicoutimi, Quebec, G7H2B1, Canada
| | - C C Wilson
- Aquatic Research and Development Section, Ontario Ministry of Natural Resources and Forestry, Peterborough, Ontario, K9J3C7, Canada
| | - M Laporte
- Institut de Biologie Intégrative des Systèmes (IBIS), Université Laval, Québec, Quebec, G1V0A6, Canada
| | - L Bernatchez
- Institut de Biologie Intégrative des Systèmes (IBIS), Université Laval, Québec, Quebec, G1V0A6, Canada
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8
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Chavarie L, Howland KL, Harris LN, Hansen MJ, Harford WJ, Gallagher CP, Baillie SM, Malley B, Tonn WM, Muir AM, Krueger CC. From top to bottom: Do Lake Trout diversify along a depth gradient in Great Bear Lake, NT, Canada? PLoS One 2018; 13:e0193925. [PMID: 29566015 PMCID: PMC5863968 DOI: 10.1371/journal.pone.0193925] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2017] [Accepted: 02/21/2018] [Indexed: 11/19/2022] Open
Abstract
Depth is usually considered the main driver of Lake Trout intraspecific diversity across lakes in North America. Given that Great Bear Lake is one of the largest and deepest freshwater systems in North America, we predicted that Lake Trout intraspecific diversity to be organized along a depth axis within this system. Thus, we investigated whether a deep-water morph of Lake Trout co-existed with four shallow-water morphs previously described in Great Bear Lake. Morphology, neutral genetic variation, isotopic niches, and life-history traits of Lake Trout across depths (0-150 m) were compared among morphs. Due to the propensity of Lake Trout with high levels of morphological diversity to occupy multiple habitat niches, a novel multivariate grouping method using a suite of composite variables was applied in addition to two other commonly used grouping methods to classify individuals. Depth alone did not explain Lake Trout diversity in Great Bear Lake; a distinct fifth deep-water morph was not found. Rather, Lake Trout diversity followed an ecological continuum, with some evidence for adaptation to local conditions in deep-water habitat. Overall, trout caught from deep-water showed low levels of genetic and phenotypic differentiation from shallow-water trout, and displayed higher lipid content (C:N ratio) and occupied a higher trophic level that suggested an potential increase of piscivory (including cannibalism) than the previously described four morphs. Why phenotypic divergence between shallow- and deep-water Lake Trout was low is unknown, especially when the potential for phenotypic variation should be high in deep and large Great Bear Lake. Given that variation in complexity of freshwater environments has dramatic consequences for divergence, variation in the complexity in Great Bear Lake (i.e., shallow being more complex than deep), may explain the observed dichotomy in the expression of intraspecific phenotypic diversity between shallow- vs. deep-water habitats. The ambiguity surrounding mechanisms driving divergence of Lake Trout in Great Bear Lake should be seen as reflective of the highly variable nature of ecological opportunity and divergent natural selection itself.
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Affiliation(s)
- Louise Chavarie
- Department of Fisheries and Wildlife, Center for Systems Integration and Sustainability, Michigan State University, East Lansing, MI, United States of America
- * E-mail:
| | - Kimberly L. Howland
- Fisheries and Oceans Canada, Winnipeg, Canada
- Department of Biological Sciences, University of Alberta, Edmonton, Canada
| | | | - Michael J. Hansen
- U.S. Geological Survey, Hammond Bay Biological Station, Millersburg, MI, United States of America
| | - William J. Harford
- Cooperative Institute of Marine & Atmospheric Studies, University of Miami, Miami, FL, United States of America
| | | | | | | | - William M. Tonn
- Department of Biological Sciences, University of Alberta, Edmonton, Canada
| | - Andrew M. Muir
- Great Lakes Fishery Commission, Ann Arbor, MI, United States of America
| | - Charles C. Krueger
- Department of Fisheries and Wildlife, Center for Systems Integration and Sustainability, Michigan State University, East Lansing, MI, United States of America
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9
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Wollebaek J, Heggenes J, Roed KH. Life histories and ecotype conservation in an adaptive vertebrate: Genetic constitution of piscivorous brown trout covaries with habitat stability. Ecol Evol 2018; 8:2729-2745. [PMID: 29531690 PMCID: PMC5838037 DOI: 10.1002/ece3.3828] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2017] [Revised: 11/30/2017] [Accepted: 12/06/2017] [Indexed: 12/23/2022] Open
Abstract
Ecotype variation in species exhibiting different life history strategies may reflect heritable adaptations to optimize reproductive success, and potential for speciation. Traditionally, ecotypes have, however, been defined by morphometrics and life history characteristics, which may be confounded with individual plasticity. Here, we use the widely distributed and polytypic freshwater fish species brown trout (Salmo trutta) as a model to study piscivorous life history and its genetic characteristics in environmentally contrasting habitats; a large lake ecosystem with one major large and stable tributary, and several small tributaries. Data from 550 fish and 13 polymorphic microsatellites (He = 0.67) indicated ecotype-specific genetic differentiation (θ = 0.0170, p < .0001) among Bayesian assigned small riverine resident and large, lake migrating brown trout (>35 cm), but only in the large tributary. In contrast, large trout did not constitute a distinct genetic group in small tributaries, or across riverine sites. Whereas life history data suggest a small, river resident and a large migratory piscivorous ecotype in all studied tributaries, genetic data indicated that a genetically distinct piscivorous ecotype is more likely to evolve in the large and relatively more stable river habitat. In the smaller tributaries, ecotypes apparently resulted from individual plasticity. Whether different life histories and ecotypes result from individual plasticity or define different genetic types, have important consequence for conservation strategies.
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Affiliation(s)
- Jens Wollebaek
- Department of Natural Sciences and Environmental HealthThe University College of Southeast NorwayBø i TelemarkNorway
| | - Jan Heggenes
- Department of Natural Sciences and Environmental HealthThe University College of Southeast NorwayBø i TelemarkNorway
| | - Knut H. Roed
- Department of Basic Science & Aquatic MedicineThe Norwegian University of Life ScienceOsloNorway
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Small-scale intraspecific patterns of adaptive immunogenetic polymorphisms and neutral variation in Lake Superior lake trout. Immunogenetics 2017; 70:53-66. [PMID: 28547520 DOI: 10.1007/s00251-017-0996-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2017] [Accepted: 04/26/2017] [Indexed: 10/19/2022]
Abstract
Many fishes express high levels of intraspecific variability, often linked to resource partitioning. Several studies show that a species' evolutionary trajectory of adaptive divergence can undergo reversals caused by changes in its environment. Such a reversal in neutral genetic and morphological variation among lake trout Salvelinus namaycush ecomorphs appears to be underway in Lake Superior. However, a water depth gradient in neutral genetic divergence was found to be associated with intraspecific diversity in the lake. To investigate patterns of adaptive immunogenetic variation among lake trout ecomorphs, we used Illumina high-throughput sequencing. The population's genetic structure of the major histocompatibility complex (MHC Class IIβ exon 2) and 18 microsatellite loci were compared to disentangle neutral and selective processes at a small geographic scale. Both MHC and microsatellite variation were partitioned more by water depth stratum than by ecomorph. Several metrics showed strong clustering by water depth in MHC alleles, but not microsatellites. We report a 75% increase in the number of MHC alleles shared between the predominant shallow and deep water ecomorphs since a previous lake trout MHC study at the same locale (c. 1990s data). This result is consistent with the reverse speciation hypothesis, although adaptive MHC polymorphisms persist along an ecological gradient. Finally, results suggested that the lake trout have multiple copies of the MHC II locus consistent with a historic genomic duplication event. Our findings indicated that conservation approaches for this species could focus on managing various ecological habitats by depth, in addition to regulating the fisheries specific to ecomorphs.
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