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Jurado-Martos F, Cardoso-Toset F, Tarradas C, Galán-Relaño Á, Sánchez-Carvajal JM, Ruedas-Torres I, Vera E, Larenas-Muñoz F, Gómez-Gascón L, Rodríguez-Gómez IM, Carrasco L, Gómez-Laguna J, Lorenzo BH, Luque I. Diagnostic performance of faecal and tissue multiplex qPCR IS900/F57 for the detection of Mycobacterium avium subspecies paratuberculosis in cattle. Res Vet Sci 2023; 161:156-162. [PMID: 37406574 DOI: 10.1016/j.rvsc.2023.06.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2023] [Revised: 05/17/2023] [Accepted: 06/05/2023] [Indexed: 07/07/2023]
Abstract
Mycobacterium avium subspecies paratuberculosis (MAP) is responsible for bovine-paratuberculosis (bPTB), which causes high production losses in cattle. A cross-sectional study was conducted in 228 cattle to evaluate the validity and diagnostic utility of a multiplex real-time PCR (qPCR) on faecal and intestinal samples [ileocaecal valve (ICV) and ileocaecal lymph nodes (ICLN)], using intestinal tissue culture as a reference test. Based on the sensitivity, specificity, and likelihood ratios (LR) obtained, the diagnostic value of faecal qPCR for confirming MAP infection was moderate (sensitivity 50.3%, specificity 93.5%, positive LR 7.8), and low to rule it out (negative LR 0.5). In areas with a prevalence of >23% the credibility of positive results was higher than 70%. In the case of negative results, their credibility was higher than 90% in herds with an infection rate below 19%, so faecal qPCR would be very useful in these areas to certify the absence of infection. For post-mortem diagnosis, qPCR on ICV samples showed good diagnostic accuracy to confirm the disease (sensitivity 71.7%, specificity 93.3%, positive LR 10.8), with a credibility higher than 70% in animals from areas or herds with a prevalence of infection greater than or equal to 18%. The best strategy to rule out the disease was the parallel combination of both tissues (ICV + ICLN) (sensitivity 81.3%, specificity 89.5%, negative LR 0.2) with a credibility of over 95% in animals from areas with an infection prevalence of 0-20%. Faecal and tissues qPCR techniques can be used to monitor bPTB, the interpretation of results, according to epidemiological situation of the herd or area, are shown.
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Affiliation(s)
| | | | - Carmen Tarradas
- Department of Animal Health, University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Ángela Galán-Relaño
- Department of Animal Health, University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - José María Sánchez-Carvajal
- Department of Anatomy and Comparative Pathology and Toxicology, Pathology and Immunology Group (UCO-PIG), University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Inés Ruedas-Torres
- Department of Anatomy and Comparative Pathology and Toxicology, Pathology and Immunology Group (UCO-PIG), University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Eduardo Vera
- Department of Animal Health, University of Cordoba, Spain
| | - Fernanda Larenas-Muñoz
- Department of Anatomy and Comparative Pathology and Toxicology, Pathology and Immunology Group (UCO-PIG), University of Cordoba, Spain
| | - Lidia Gómez-Gascón
- Department of Animal Health, University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Irene Magdalena Rodríguez-Gómez
- Department of Anatomy and Comparative Pathology and Toxicology, Pathology and Immunology Group (UCO-PIG), University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Librado Carrasco
- Department of Anatomy and Comparative Pathology and Toxicology, Pathology and Immunology Group (UCO-PIG), University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Jaime Gómez-Laguna
- Department of Anatomy and Comparative Pathology and Toxicology, Pathology and Immunology Group (UCO-PIG), University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Belén Huerta Lorenzo
- Department of Animal Health, University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
| | - Inmaculada Luque
- Department of Animal Health, University of Cordoba, Spain; UIC Zoonosis y Enfermedades Emergentes ENZOEM, International Excellence Agrifood Campus 'ceiA3', University of Cordoba, Cordoba, Spain
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Johnson P, McLeod L, Qin Y, Osgood N, Rosengren L, Campbell J, Larson K, Waldner C. Investigating effective testing strategies for the control of Johne's disease in western Canadian cow-calf herds using an agent-based simulation model. Front Vet Sci 2022; 9:1003143. [PMID: 36504856 PMCID: PMC9732103 DOI: 10.3389/fvets.2022.1003143] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 11/04/2022] [Indexed: 11/27/2022] Open
Abstract
Johne's disease is an insidious infectious disease of ruminants caused by Mycobacterium avium subspecies paratuberculosis (MAP). Johne's disease can have important implications for animal welfare and risks causing economic losses in affected herds due to reduced productivity, premature culling and replacement, and veterinary costs. Despite the limited accuracy of diagnostic tools, testing and culling is the primary option for controlling Johne's disease in beef herds. However, evidence to inform specific test and cull strategies is lacking. In this study, a stochastic, continuous-time agent-based model was developed to investigate Johne's disease and potential control options in a typical western Canadian cow-calf herd. The objective of this study was to compare different testing and culling scenarios that included varying the testing method and frequency as well as the number and risk profile of animals targeted for testing using the model. The relative effectiveness of each testing scenario was determined by the simulated prevalence of cattle shedding MAP after a 10-year testing period. A second objective was to compare the direct testing costs of each scenario to identify least-cost options that are the most effective at reducing within-herd disease prevalence. Whole herd testing with individual PCR at frequencies of 6 or 12 months were the most effective options for reducing disease prevalence. Scenarios that were also effective at reducing prevalence but with the lowest total testing costs included testing the whole herd with individual PCR every 24 months and testing the whole herd with pooled PCR every 12 months. The most effective method with the lowest annual testing cost per unit of prevalence reduction was individual PCR on the whole herd every 24 months. Individual PCR testing only cows that had not already been tested 4 times also ranked well when considering both final estimated prevalence at 10 years and cost per unit of gain. A more in-depth economic analysis is needed to compare the cost of testing to the cost of disease, taking into account costs of culling, replacements and impacts on calf crops, and to determine if testing is an economically attractive option for commercial cow-calf operations.
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Affiliation(s)
- Paisley Johnson
- Large Animal Clinical Sciences, Western College of Veterinary Medicine, Saskatoon, SK, Canada
| | - Lianne McLeod
- Large Animal Clinical Sciences, Western College of Veterinary Medicine, Saskatoon, SK, Canada
| | - Yang Qin
- Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada
| | - Nathaniel Osgood
- Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada
| | | | - John Campbell
- Large Animal Clinical Sciences, Western College of Veterinary Medicine, Saskatoon, SK, Canada
| | - Kathy Larson
- Agricultural and Resource Economics, College of Agriculture and Bioresources, Saskatoon, SK, Canada
| | - Cheryl Waldner
- Large Animal Clinical Sciences, Western College of Veterinary Medicine, Saskatoon, SK, Canada
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Detection of Low MAP Shedder Prevalence in Large Free-Stall Dairy Herds by Repeated Testing of Environmental Samples and Pooled Milk Samples. Animals (Basel) 2022; 12:ani12111343. [PMID: 35681807 PMCID: PMC9179536 DOI: 10.3390/ani12111343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Revised: 05/21/2022] [Accepted: 05/22/2022] [Indexed: 11/24/2022] Open
Abstract
Simple Summary Paratuberculosis is a disease which affects ruminants worldwide. Many countries have implemented certification and monitoring systems to control the disease, particularly in dairy herds. Monitoring herds certified as paratuberculosis non-suspect is an important component of paratuberculosis herd certification programs. The challenge is to detect the introduction or reintroduction of the infectious agent as early as possible with reasonable efforts but high certainty. In our study, we evaluated different low-cost testing schemes in herds where the share of infected animals was low, resulting in a low within-herd prevalence of animals shedding the bacteria that causes paratuberculosis in their feces. The test methods used were repeated pooled milk samples and fecal samples from the barn environment. Our study showed that numerous repetitions of different samples are necessary to monitor such herds with sufficiently high certainty. In the case of herds with a very low prevalence, our study showed that a combination of different sampling approaches is required. Abstract An easy-to-use and affordable surveillance system is crucial for paratuberculosis control. The use of environmental samples and milk pools has been proven to be effective for the detection of Mycobacterium avium subsp. paratuberculosis (MAP)-infected herds, but not for monitoring dairy herds certified as MAP non-suspect. We aimed to evaluate methods for the repeated testing of large dairy herds with a very low prevalence of MAP shedders, using different sets of environmental samples or pooled milk samples, collected monthly over a period of one year in 36 herds with known MAP shedder prevalence. Environmental samples were analyzed by bacterial culture and fecal PCR, and pools of 25 and 50 individual milk samples were analyzed by ELISA for MAP-specific antibodies. We estimated the cumulative sensitivity and specificity for up to twelve sampling events by adapting a Bayesian latent class model and taking into account the between- and within-test correlation. Our study revealed that at least seven repeated samplings of feces from the barn environment are necessary to achieve a sensitivity of 95% in herds with a within-herd shedder prevalence of at least 2%. The detection of herds with a prevalence of less than 2% is more challenging and, in addition to numerous repetitions, requires a combination of different samples.
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Zoche-Golob V, Donat K, Barkema HW, De Buck J, Kastelic J, Wolf R. Predicting sensitivity of repeated environmental sampling for Mycobacterium avium subsp. paratuberculosis in dairy herds using a Bayesian latent class model. Vet J 2021; 275:105728. [PMID: 34358682 DOI: 10.1016/j.tvjl.2021.105728] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2020] [Revised: 07/31/2021] [Accepted: 08/01/2021] [Indexed: 10/20/2022]
Abstract
Between-herd transmission of Mycobacterium avium subsp. paratuberculosis (MAP) by subclinically infected cattle is an important risk which can hamper effective control of paratuberculosis. Knowledge of herd status would substantially reduce this risk; MAP positive farms can be detected with environmental sampling. The objective of this study was to compare cumulative sensitivities of annual environmental sampling with two or four samples per sampling event without knowledge of true herd status and to calculate the number of sampling events to achieve a cumulative sensitivity of at least 0.9. Data from three repeated sampling events in two study populations, one with 55 herds (two samples/event) and another with 30 herds (four samples/event) including test results, herd and sample characteristics and prior prevalence estimates, were derived from the Alberta Johne's Disease Initiative (Alberta, Canada). A recursive Bayesian latent class model was used to predict the cumulative sensitivity of repeated environmental sampling events. A sampling scheme with four samples per sampling event had a higher cumulative sensitivity than an alternative scheme with two samples. To achieve a cumulative sensitivity of at least 0.9 with 95% probability, eight sampling events with two environmental samples per set, or four sampling events with four samples per set were required. Further model assessment demonstrated that these results can only be generalized to cattle populations with a similar within-herd prevalence to those studied here (approximately 0.08). Nonetheless, these results could help predict herd-level prevalence in cattle populations after environmental testing and provide information regarding the uncertainty behind status estimates for herds repeatedly tested using environmental samples.
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Affiliation(s)
- V Zoche-Golob
- Thuringian Animal Health Fund, Animal Health Service, Victor-Goerttler-Strasse 4, 07745 Jena, Germany.
| | - K Donat
- Thuringian Animal Health Fund, Animal Health Service, Victor-Goerttler-Strasse 4, 07745 Jena, Germany
| | - H W Barkema
- Department of Production Animal Health, Faculty of Veterinary Medicine, University of Calgary, 2500 University Drive NW, T2N4N1, Calgary, Canada
| | - J De Buck
- Department of Production Animal Health, Faculty of Veterinary Medicine, University of Calgary, 2500 University Drive NW, T2N4N1, Calgary, Canada
| | - J Kastelic
- Department of Production Animal Health, Faculty of Veterinary Medicine, University of Calgary, 2500 University Drive NW, T2N4N1, Calgary, Canada
| | - R Wolf
- Amt der Steiermärkischen Landesregierung, Fachabteilung Gesundheit und Pflegemanagement, Friedrichgasse 9, 8010 Graz, Austria
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Nielsen LR, Houe H, Nielsen SS. Narrative Review Comparing Principles and Instruments Used in Three Active Surveillance and Control Programmes for Non-EU-regulated Diseases in the Danish Cattle Population. Front Vet Sci 2021; 8:685857. [PMID: 34350228 PMCID: PMC8326568 DOI: 10.3389/fvets.2021.685857] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Accepted: 06/24/2021] [Indexed: 11/30/2022] Open
Abstract
The objective of this paper is to provide a comparative review of three active surveillance and control programmes in the Danish cattle sector to highlight important differences for decision makers to develop successful programmes. The focus is on differences in purpose, principles, design and instruments applied to achieve the goals stated for each programme for bovine viral diarrhoea (BVDV), paratuberculosis and Salmonella Dublin. The purposes of the programmes are to reduce economic consequences and improve animal welfare, and for S. Dublin also to prevent zoonotic risk, with varying importance as motivation for the programmes over time. The targets of the BVDV and S. Dublin programmes have been to eradicate the diseases from the Danish cattle population. This goal was successfully reached for BVDV in 2006 where the programme was changed to a surveillance programme after 12 years with an active control programme. The S. Dublin dairy herd-level prevalence decreased from 25% in 2003 to 6% in 2015, just before the milk quota system was abandoned. Over the last 5 years, the prevalence has increased to 8–9% test-positive dairy herds. It is mandatory to participate, and frequent updates of legislative orders were used over two decades as critical instruments in those two programmes. In contrast, participation in the paratuberculosis programme is voluntary and the goals are to promote participation and reduce the prevalence and economic and welfare consequences of the disease. The daily administration of all three programmes is carried out by the major farmers' organisation, who organise surveillance, IT-solutions and other control tools, projects and communication in collaboration with researchers from the universities, laboratories and, for BVDV and S. Dublin, the veterinary authorities. Differences among the programme designs and instruments are mainly due to the environmental component of paratuberculosis and S. Dublin, as the bacteria able to survive for extended periods outside the host. This extra diffuse source of infection increases the demand for persistent and daily hygiene and management efforts. The lower test sensitivities (than for BVDV) lead to a requirement to perform repeated testing of herds and animals over longer time periods calling for withstanding motivation among farmers.
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Affiliation(s)
- Liza Rosenbaum Nielsen
- Section for Animal Welfare and Disease Control, Department of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Frederiksberg, Denmark
| | - Hans Houe
- Section for Animal Welfare and Disease Control, Department of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Frederiksberg, Denmark
| | - Søren Saxmose Nielsen
- Section for Animal Welfare and Disease Control, Department of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Frederiksberg, Denmark
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Criado M, Benavides J, Vallejo R, Arteche N, Gutiérrez D, Ferreras MC, Pérez V, Espinosa J. Local assessment of WC1 + γδ T lymphocyte subset in the different types of lesions associated with bovine paratuberculosis. Comp Immunol Microbiol Infect Dis 2020; 69:101422. [PMID: 31982851 DOI: 10.1016/j.cimid.2020.101422] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 01/08/2020] [Accepted: 01/10/2020] [Indexed: 12/17/2022]
Abstract
The local expression of WC1+ γδ T lymphocytes subset has been evaluated by immunohistochemical methods at the different types of lesions present in cows naturally infected with Mycobacterium avium subsp. paratuberculosis (Map) and in non-infected control animals. Infected cattle were either in the latent/subclinical (focal lesions) or clinical (diffuse paucibacillary and multibacillary forms) stage of paratuberculosis. To assess the cell distribution, a differential cell count was carried out at the lamina propria, gut-associated lymphoid tissue and submucosa. A significant increase in the number of WC1+ γδ T cells was observed in all the infected animals, regardless of the type of lesion. Cows with focal lesions showed higher number of labeled cells than those with diffuse forms, where no differences were found between the two types. This increase in the number of positively immunolabelled lymphocytes in infected animals was seen in the lamina propria, with higher values in those with focal lesions. While in the lymphoid tissue no differences in the numbers were observed, in animals with focal lesions, WC1+ γδ T cells tended to be located at the periphery of the granulomas. These findings suggest a proinflammatory action of WC1+ γδ T lymphocytes in bovine paratuberculosis, which might play an important role in the containment of the Map-infection in the focal granulomas located in the lymphoid tissue, helping to prevent the progression toward diffuse forms responsible for the clinical signs.
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Affiliation(s)
- Miguel Criado
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain
| | - Julio Benavides
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain
| | - Raquel Vallejo
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain
| | - Noive Arteche
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain
| | - Daniel Gutiérrez
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain
| | - M Carmen Ferreras
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain
| | - Valentín Pérez
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain
| | - José Espinosa
- Dpto. Sanidad Animal, Instituto De Ganadería De Montaña (CSIC-Universidad De León), Facultad De Veterinaria, Campus De Vegazana s/n, 24071, León, Spain.
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Knific T, Ocepek M, Kirbiš A, Lentz HHK. Implications of Cattle Trade for the Spread and Control of Infectious Diseases in Slovenia. Front Vet Sci 2020; 6:454. [PMID: 31993442 PMCID: PMC6971048 DOI: 10.3389/fvets.2019.00454] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Accepted: 11/27/2019] [Indexed: 12/22/2022] Open
Abstract
The objectives of this study were to gain insight into the structure of the cattle trade network in Slovenia and to evaluate the potential for infectious disease spread through movements. The study considered cattle movements between different types of premises that occurred between August 1, 2011 and July 31, 2016 with the exclusion of the movements to the end nodes (e.g., slaughterhouses). In the first part, we performed a static network analysis on monthly and yearly snapshots of the network. These time scales reflect our interest in slowly spreading pathogens; namely Mycobacterium avium subsp. paratuberculosis (MAP), which causes paratuberculosis, a worldwide economically important disease. The results showed consistency in the network measures over time; nevertheless, it was evident that year to year contacts between premises were changing. The importance of individual premises for the network connectedness was highly heterogeneous and the most influential premises in the network were collection centers, mountain pastures, and pastures. Compared to random node removal, targeted removal informed by ranking based on local network measures from previous years was substantially more effective in network disassociation. Inclusion of the latest movement data improved the results. In the second part, we simulated disease spread using a Susceptible-Infectious (SI) model on the temporal network. The SI model was based on the empirically estimated true prevalence of paratuberculosis in Slovenia and four scenarios for probabilities of transmission. Different probabilities were realized by the generation of new networks with the corresponding proportion of contacts which were randomly selected from the original network. These diluted networks served as substrates for simulation of MAP spread. The probability of transmission had a significant influence on the velocity of disease spread through the network. The peaks in daily incidence rates of infected herds were observed at the end of the grazing period. Our results suggest that network analysis may provide support in the optimization of paratuberculosis surveillance and intervention in Slovenia. The approach of simulating disease spread on a diluted network may also be used to model other transmission pathways between herds.
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Affiliation(s)
- Tanja Knific
- Veterinary Faculty, Institute of Microbiology and Parasitology, University of Ljubljana, Ljubljana, Slovenia
| | - Matjaž Ocepek
- Veterinary Faculty, Institute of Microbiology and Parasitology, University of Ljubljana, Ljubljana, Slovenia
| | - Andrej Kirbiš
- Veterinary Faculty, Institute of Food Safety, Feed and Environment, University of Ljubljana, Ljubljana, Slovenia
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Brock J, Lange M, More SJ, Graham D, Thulke HH. Reviewing age-structured epidemiological models of cattle diseases tailored to support management decisions: Guidance for the future. Prev Vet Med 2019; 174:104814. [PMID: 31743817 DOI: 10.1016/j.prevetmed.2019.104814] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2019] [Revised: 10/22/2019] [Accepted: 10/23/2019] [Indexed: 12/31/2022]
Abstract
Mechanistic simulation models are being increasingly used as tools to assist with animal health decision-making in the cattle sector. We reviewed scientific literature for studies reporting age-structured cattle management models in application to infectious diseases. Our emphasis was on papers dedicated to support decision making in the field. In this systematic review we considered 1290 manuscripts and identified 76 eligible studies. These are based on 52 individual models from 10 countries addressing 9 different pathogens. We provide an overview of these models and present in detail their theoretical foundations, design paradigms and incorporated processes. We propose a structure of the characteristics of cattle disease models using three main features: [1] biological processes, [2] farming-related processes and [3] pathogen-related processes. It would be of benefit if future cattle disease models were to follow this structure to facilitate science communication and to allow increased model transparency.
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Affiliation(s)
- Jonas Brock
- Helmholtz Centre for Environmental Research GmbH - UFZ, Dept Ecological Modelling, PG Ecological Epidemiology, Leipzig, Germany; Animal Health Ireland, Carrick-on-Shannon, Co. Leitrim, Ireland.
| | - Martin Lange
- Helmholtz Centre for Environmental Research GmbH - UFZ, Dept Ecological Modelling, PG Ecological Epidemiology, Leipzig, Germany
| | - Simon J More
- Centre for Veterinary Epidemiology and Risk Analysis, UCD School of Veterinary Medicine, University College Dublin, Dublin, Ireland
| | - David Graham
- Animal Health Ireland, Carrick-on-Shannon, Co. Leitrim, Ireland
| | - Hans-Hermann Thulke
- Helmholtz Centre for Environmental Research GmbH - UFZ, Dept Ecological Modelling, PG Ecological Epidemiology, Leipzig, Germany
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Whittington R, Donat K, Weber MF, Kelton D, Nielsen SS, Eisenberg S, Arrigoni N, Juste R, Sáez JL, Dhand N, Santi A, Michel A, Barkema H, Kralik P, Kostoulas P, Citer L, Griffin F, Barwell R, Moreira MAS, Slana I, Koehler H, Singh SV, Yoo HS, Chávez-Gris G, Goodridge A, Ocepek M, Garrido J, Stevenson K, Collins M, Alonso B, Cirone K, Paolicchi F, Gavey L, Rahman MT, de Marchin E, Van Praet W, Bauman C, Fecteau G, McKenna S, Salgado M, Fernández-Silva J, Dziedzinska R, Echeverría G, Seppänen J, Thibault V, Fridriksdottir V, Derakhshandeh A, Haghkhah M, Ruocco L, Kawaji S, Momotani E, Heuer C, Norton S, Cadmus S, Agdestein A, Kampen A, Szteyn J, Frössling J, Schwan E, Caldow G, Strain S, Carter M, Wells S, Munyeme M, Wolf R, Gurung R, Verdugo C, Fourichon C, Yamamoto T, Thapaliya S, Di Labio E, Ekgatat M, Gil A, Alesandre AN, Piaggio J, Suanes A, de Waard JH. Control of paratuberculosis: who, why and how. A review of 48 countries. BMC Vet Res 2019; 15:198. [PMID: 31196162 PMCID: PMC6567393 DOI: 10.1186/s12917-019-1943-4] [Citation(s) in RCA: 172] [Impact Index Per Article: 34.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2018] [Accepted: 05/31/2019] [Indexed: 12/20/2022] Open
Abstract
Paratuberculosis, a chronic disease affecting ruminant livestock, is caused by Mycobacterium avium subsp. paratuberculosis (MAP). It has direct and indirect economic costs, impacts animal welfare and arouses public health concerns. In a survey of 48 countries we found paratuberculosis to be very common in livestock. In about half the countries more than 20% of herds and flocks were infected with MAP. Most countries had large ruminant populations (millions), several types of farmed ruminants, multiple husbandry systems and tens of thousands of individual farms, creating challenges for disease control. In addition, numerous species of free-living wildlife were infected. Paratuberculosis was notifiable in most countries, but formal control programs were present in only 22 countries. Generally, these were the more highly developed countries with advanced veterinary services. Of the countries without a formal control program for paratuberculosis, 76% were in South and Central America, Asia and Africa while 20% were in Europe. Control programs were justified most commonly on animal health grounds, but protecting market access and public health were other factors. Prevalence reduction was the major objective in most countries, but Norway and Sweden aimed to eradicate the disease, so surveillance and response were their major objectives. Government funding was involved in about two thirds of countries, but operations tended to be funded by farmers and their organizations and not by government alone. The majority of countries (60%) had voluntary control programs. Generally, programs were supported by incentives for joining, financial compensation and/or penalties for non-participation. Performance indicators, structure, leadership, practices and tools used in control programs are also presented. Securing funding for long-term control activities was a widespread problem. Control programs were reported to be successful in 16 (73%) of the 22 countries. Recommendations are made for future control programs, including a primary goal of establishing an international code for paratuberculosis, leading to universal acknowledgment of the principles and methods of control in relation to endemic and transboundary disease. An holistic approach across all ruminant livestock industries and long-term commitment is required for control of paratuberculosis.
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Affiliation(s)
- Richard Whittington
- School of Veterinary Science, Faculty of Science, University of Sydney, 425 Werombi Road, Camden, NSW 2570 Australia
| | - Karsten Donat
- Animal Health Service, Thuringian Animal Diseases Fund, 07745 Jena, Germany
- Clinic for Obstetrics, Gynecology and Andrology with Veterinary Ambulance, Justus-Liebig-University Giessen, 35392 Giessen, Germany
| | | | - David Kelton
- Department of Population Medicine, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Søren Saxmose Nielsen
- Department of Veterinary and Animal Sciences, University of Copenhagen, DK-1870 Frederiksberg C, Denmark
| | | | - Norma Arrigoni
- Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia Romagna, 29027 Podenzano, Italy
| | - Ramon Juste
- Servicio Regional de Investigación y Desarrollo Agroalimentario (SERIDA), 33300 Villaviciosa, Asturias Spain
| | - Jose Luis Sáez
- Ministry of Agriculture and Fisheries, Food and Environment, ES-28071 Madrid, Spain
| | - Navneet Dhand
- School of Veterinary Science, Faculty of Science, University of Sydney, 425 Werombi Road, Camden, NSW 2570 Australia
| | - Annalisa Santi
- Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia Romagna, 29027 Podenzano, Italy
| | - Anita Michel
- Faculty of Veterinary Science, University of Pretoria, Onderstepoort, 0110 South Africa
| | - Herman Barkema
- Faculty of Veterinary Medicine, University of Calgary, Calgary, Alberta T2N 4N1 Canada
| | - Petr Kralik
- Veterinary Research Institute, 621 00 Brno, Czech Republic
| | | | - Lorna Citer
- Animal Health Ireland, Carrick on Shannon, Co. Leitrim, N41 WN27 Republic of Ireland
| | - Frank Griffin
- Disease Research Limited, Invermay Agricultural Centre, Mosgiel, 9092 New Zealand
| | - Rob Barwell
- Animal Health Australia, Turner, ACT 2612 Australia
| | | | - Iva Slana
- Veterinary Research Institute, 621 00 Brno, Czech Republic
| | - Heike Koehler
- Friedrich-Loeffler-Institut, Federal Research Institute of Animal Health, 07743 Jena, Germany
| | - Shoor Vir Singh
- Deparment of Biotechnology, GLA University, Mathura, Uttar Pradesh 281 406 India
| | - Han Sang Yoo
- Department of Infectious Diseases, College of Veterinary Medicine, Seoul National University, Seoul, 08826 South Korea
| | - Gilberto Chávez-Gris
- Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autonoma de México, 76750 Tequisquiapan, Queretaro, Mexico
| | - Amador Goodridge
- Instituto de Investigaciones Científicas y Servicios de Alta Tecnología, City of Knowledge, Panama City, 0843-01103 Panama
| | - Matjaz Ocepek
- National Veterinary Institute, Veterinary Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia
| | - Joseba Garrido
- Instituto Vasco de Investigacion y Desarrollo Agrario-NEIKER, 48160 Derio, Bizkaia Spain
| | | | - Mike Collins
- School of Veterinary Medicine, University of Wisconsin-Madison, Wisconsin, 53706-1102 USA
| | | | - Karina Cirone
- Instituto Nacional de Tecnologia Agropecuaria, 7620 Balcarce, Argentina
| | | | - Lawrence Gavey
- Biosecurity Queensland, Department of Agriculture and Fisheries, Toowoomba, Queensland 4350 Australia
| | - Md Tanvir Rahman
- Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202 Bangladesh
| | | | | | - Cathy Bauman
- Department of Population Medicine, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Gilles Fecteau
- Faculté de Médecine Vétérinaire, University of Montreal, Quebec, J2S 6Z9 Canada
| | - Shawn McKenna
- Atlantic Veterinary College, Charlottetown, Prince Edward Island C1A 4P3 Canada
| | - Miguel Salgado
- Facultad de Ciencias Veterinarias, Universidad Austral de Chile, 5090000 Valdivia, Chile
| | - Jorge Fernández-Silva
- Escuela de Medicina Veterinaria, Universidad de Antioquia, Medellín, Antioquia 050034076 Colombia
| | | | - Gustavo Echeverría
- Instituto de Investigación en Salud Pública y Zoonosis, Universidad Central del Ecuador, 17-03-100 Quito, Ecuador
| | - Jaana Seppänen
- Finnish Food Authority, Mustialankatu 3, 00790 Helsinki, Finland
| | - Virginie Thibault
- ANSES Laboratoire de Ploufragan-Plouzané-Niort and GDS France, CS 28440, 79024 Niort Cedex, France
| | - Vala Fridriksdottir
- Institute for Experimental Pathology at Keldur, University of Iceland, IS-112 Reykjavík, Iceland
| | | | - Masoud Haghkhah
- School of Veterinary Medicine, Shiraz University, Shiraz, 71441-69155 Iran
| | - Luigi Ruocco
- Ministry of Health, General Directorate of Animal Health and Veterinary Medicines, 00144 Rome, Italy
| | - Satoko Kawaji
- National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, 305-0856 Japan
| | - Eiichi Momotani
- Comparative Medical Research Institute, Tsukuba, Ibaraki 305-0856 Japan
| | - Cord Heuer
- School of Veterinary Sciences, Massey University, Palmerston North, 4441 New Zealand
| | | | - Simeon Cadmus
- Department of Veterinary Public Health and Preventive Medicine, University of Ibadan, Ibadan, Nigeria
| | | | | | - Joanna Szteyn
- Faculty of Veterinary Medicine, University of Warmia and Mazury, 10-718 Olsztyn, Poland
| | | | - Ebba Schwan
- Swedish Farm and Animal Health, 62254 Romakloster, Sweden
| | | | - Sam Strain
- Animal Health and Welfare Northern Ireland, Dungannon Enterprise Centre, Dungannon, BT71 6JT UK
| | - Mike Carter
- USDA-APHIS-Veterinary Services, Riverdale, MD 20737 USA
| | - Scott Wells
- College of Veterinary Medicine, University of Minnesota, St. Paul, MN 55108 USA
| | - Musso Munyeme
- School of Veterinary Medicine, The University of Zambia, 10101 Lusaka, Zambia
| | - Robert Wolf
- Fachabteilung Gesundheit und Pflegemanagement, 8010 Graz, Austria
| | - Ratna Gurung
- National Centre for Animal Health, Serbithang, Bhutan
| | - Cristobal Verdugo
- Facultad de Ciencias Veterinarias, Universidad Austral de Chile, 5090000 Valdivia, Chile
| | - Christine Fourichon
- Oniris – INRA, Department Farm Animal Health and Public Health, 44307 Nantes cedex 3, France
| | - Takehisa Yamamoto
- National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, 305-0856 Japan
| | - Sharada Thapaliya
- Faculty of Animal Science, Veterinary Science and Fisheries, Agriculture and Forestry University, Rampur, Chitwan Nepal
| | - Elena Di Labio
- Federal Food Safety and Veterinary Office, 3003 Bern, Switzerland
| | - Monaya Ekgatat
- National Institute of Animal Health, Chatuchak, Bangkok, 10900 Thailand
| | - Andres Gil
- Facultad de Veterinaria, Lasplaces 1620, CP 11600 Montevideo, Uruguay
| | | | - José Piaggio
- Facultad de Veterinaria, Lasplaces 1620, CP 11600 Montevideo, Uruguay
| | - Alejandra Suanes
- Ministry of Livestock Agriculture and Fisheries of Uruguay, CP 11300 Montevideo, Uruguay
| | - Jacobus H. de Waard
- Servicio Autonomo Instituto de Biomedicina, Universidad Central de Venezuela, Caracas, Venezuela
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A data-driven individual-based model of infectious disease in livestock operation: A validation study for paratuberculosis. PLoS One 2018; 13:e0203177. [PMID: 30550580 PMCID: PMC6294356 DOI: 10.1371/journal.pone.0203177] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2018] [Accepted: 11/26/2018] [Indexed: 12/11/2022] Open
Abstract
Chronic livestock diseases cause large financial loss and affect animal health and welfare. Controlling these diseases mostly requires precise information on both individual animal and population dynamics to inform the farmer’s decisions, but even successful control programmes do by no means assure elimination. Mathematical models provide opportunities to test different control and elimination options rather than implementing them in real herds, but these models require robust parameter estimation and validation. Fitting these models to data is a difficult task due to heterogeneities in livestock processes. In this paper, we develop an infectious disease modeling framework for a livestock disease (paratuberculosis) that is caused by Mycobacterium avium subsp. paratuberculosis (MAP). Infection with MAP leads to reduced milk production, pregnancy rates, and slaughter value and increased culling rates in cattle and causes significant economic losses to the dairy industry. These economic effects are particularly important motivations in the control and elimination of MAP. In this framework, an individual-based model (IBM) of a dairy herd was built and MAP infection dynamics was integrated. Once the model produced realistic dynamics of MAP infection, we implemented an evaluation method by fitting it to data from three dairy herds from the Northeast region of the US. The model fitting exercises used least-squares and parameter space searching methods to obtain the best-fitted values of selected parameters. The best set of parameters were used to model the effect of interventions. The results show that the presented model can complement real herd statistics where the intervention strategies suggest a reduction in MAP prevalence without elimination. Overall, this research not only provides a complete model for MAP infection dynamics in a dairy herd but also offers a method for estimating parameters by fitting IBM models.
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11
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Kirkeby C, Græsbøll K, Halasa T. Evaluating the impact of transmission mode, calibration level and farmer compliance in simulation models of paratuberculosis in dairy herds. Sci Rep 2018; 8:9100. [PMID: 29904101 PMCID: PMC6002403 DOI: 10.1038/s41598-018-27518-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2017] [Accepted: 05/31/2018] [Indexed: 01/13/2023] Open
Abstract
Simulation models can predict the outcome of different strategies for the control and eradication of paratuberculosis (PTB) in dairy herds. Two main transmission modes have previously been used to simulate the spread of PTB: direct (contact between animals) and indirect (through the environment). In addition, previous models were calibrated to either low or high within-herd prevalence levels, which we refer to as normal and low hygiene levels, respectively. We simulated both direct and indirect transmission with the same model in both normal and low hygiene level scenarios. The effectiveness of a test-and-cull strategy was dependent on the calibration level of the simulation model, and eradication occurred less frequently with the more biologically plausible indirect transmission mode. The results were compared to within-herd prevalence records from 314 dairy herds. The prevalence in 50% of the herds varied less than 0.9% per year on average, and less than 4% in 90% of the herds. We therefore conclude that the normal-hygiene scenario best describes most dairy herds in Denmark. Finally, we simulated different levels of farmer compliance with a test-and-cull strategy and found that a 60% compliance level was not sufficient to reach eradication within 10 years.
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Affiliation(s)
- Carsten Kirkeby
- National Veterinary Institute, Technical University of Denmark, Kemitorvet, 2800, Lyngby, Denmark.
| | - Kaare Græsbøll
- National Veterinary Institute, Technical University of Denmark, Kemitorvet, 2800, Lyngby, Denmark
| | - Tariq Halasa
- National Veterinary Institute, Technical University of Denmark, Kemitorvet, 2800, Lyngby, Denmark
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12
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Nowotarska SW, Nowotarski K, Grant IR, Elliott CT, Friedman M, Situ C. Mechanisms of Antimicrobial Action of Cinnamon and Oregano Oils, Cinnamaldehyde, Carvacrol, 2,5-Dihydroxybenzaldehyde, and 2-Hydroxy-5-Methoxybenzaldehyde against Mycobacterium avium subsp. paratuberculosis (Map). Foods 2017; 6:foods6090072. [PMID: 28837070 PMCID: PMC5615284 DOI: 10.3390/foods6090072] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2017] [Revised: 08/08/2017] [Accepted: 08/21/2017] [Indexed: 01/04/2023] Open
Abstract
The antimicrobial modes of action of six naturally occurring compounds, cinnamon oil, cinnamaldehyde, oregano oil, carvacrol, 2,5-dihydroxybenzaldehyde, and 2-hydroxy-5-methoxybenzaldehyde, previously found to inhibit the growth of Mycobacterium avium subsp. paratuberculosis (Map) reported to infect food animals and humans and to be present in milk, cheese, and meat, were investigated. The incubation of Map cultures in the presence of all six compounds caused phosphate ions to leak into the extracellular environment in a time- and concentration-dependent manner. Cinnamon oil and cinnamaldehyde decreased the intracellular adenosine triphosphate (ATP) concentration of Map cells, whereas oregano oil and carvacrol caused an initial decrease of intracellular ATP concentration that was restored gradually after incubation at 37 °C for 2 h. Neither 2,5-dihydroxybenzaldehyde nor 2-hydroxy-5-methoxybenzaldehyde had a significant effect on intracellular ATP concentration. None of the compounds tested were found to cause leakage of ATP to the extracellular environment. Monolayer studies involving a Langmuir trough apparatus revealed that all anti-Map compounds, especially the essential oil compounds, altered the molecular packing characteristics of phospholipid molecules of model membranes, causing fluidization. The results of the physicochemical model microbial membrane studies suggest that the destruction of the pathogenic bacteria might be associated with the disruption of the bacterial cell membrane.
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Affiliation(s)
- Stella W Nowotarska
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, David Keir Building, Stranmillis Road, Belfast BT9 5AG, UK.
| | - Krzysztof Nowotarski
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, David Keir Building, Stranmillis Road, Belfast BT9 5AG, UK.
| | - Irene R Grant
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, David Keir Building, Stranmillis Road, Belfast BT9 5AG, UK.
| | - Christopher T Elliott
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, David Keir Building, Stranmillis Road, Belfast BT9 5AG, UK.
| | - Mendel Friedman
- Western Regional Research Center, Agricultural Research Service, U.S. Department of Agriculture, Albany, CA 94710, USA.
| | - Chen Situ
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, David Keir Building, Stranmillis Road, Belfast BT9 5AG, UK.
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