1
|
Gartner SM, Whitlow KR, Laurence-Chasen JD, Kaczmarek EB, Granatosky MC, Ross CF, Westneat MW. Suction feeding of West African lungfish (Protopterus annectens): An XROMM analysis of jaw mechanics, cranial kinesis, and hyoid mobility. Biol Open 2022; 11:276553. [PMID: 36066131 PMCID: PMC9493713 DOI: 10.1242/bio.059447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 08/02/2022] [Indexed: 11/20/2022] Open
Abstract
Suction feeding in fishes is characterized by rapid cranial movements, but extant lungfishes (Sarcopterygii: Dipnoi) exhibit a reduced number and mobility of cranial bones relative to actinopterygian fishes. Despite fusion of cranial elements, lungfishes are proficient at suction feeding, though the impacts of novel cranial morphology and reduced cranial kinesis on feeding remain poorly understood. We used X-ray Reconstruction of Moving Morphology (XROMM) to study the kinematics of seven mobile skeletal elements (neurocranium, upper jaw, lower jaw, tongue, ceratohyal, clavicle, and cranial rib) and two muscles (costoclavicular portion of the hypaxialis and rectus cervicis) during the feeding strikes of West African lungfish (Protopterus annectens). We found that feeding by P. annectens on non-evasive prey is relatively slow, with a mean time to peak gape of 273 ms. Lower jaw depression and clavicular rotation were hinge-like, with one degree of freedom, but the ceratohyals rotated in a complex motion involving depression and long-axis rotation. We quantified the relative contributions to oral cavity volume change (RCVC) and found that oral cavity expansion is created primarily by ceratohyal and clavicle motion. P. annectens suction feeds relatively slowly but successfully through muscle shortening of hypaxial and rectus cervicis muscles contributing to hyoid mobility.
Collapse
Affiliation(s)
- Samantha M Gartner
- Department of Organismal Biology and Anatomy, University of Chicago, 1027 East 57th St, Chicago, IL 60637, USA
| | - Katrina R Whitlow
- Department of Organismal Biology and Anatomy, University of Chicago, 1027 East 57th St, Chicago, IL 60637, USA
| | - J D Laurence-Chasen
- Department of Organismal Biology and Anatomy, University of Chicago, 1027 East 57th St, Chicago, IL 60637, USA
| | - Elska B Kaczmarek
- Department of Ecology, Evolution, and Organismal Biology, Brown University, 80 Waterman St., Providence RI 02912, USA
| | - Michael C Granatosky
- Department of Anatomy, New York Institute of Technology College of Osteopathic Medicine, 100 Northern Blvd, Old Westbury, NY 11568, USA
| | - Callum F Ross
- Department of Organismal Biology and Anatomy, University of Chicago, 1027 East 57th St, Chicago, IL 60637, USA
| | - Mark W Westneat
- Department of Organismal Biology and Anatomy, University of Chicago, 1027 East 57th St, Chicago, IL 60637, USA
| |
Collapse
|
2
|
Scheidt A, Ditzel PC, Geiger SM, Wagner FC, Mülling CKW, Nyakatura JA. A therian mammal with sprawling kinematics? Gait and 3D forelimb X-ray motion analysis in tamanduas. J Exp Biol 2022; 225:275397. [PMID: 35554550 DOI: 10.1242/jeb.243625] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Accepted: 05/08/2022] [Indexed: 10/18/2022]
Abstract
Therian mammals are known to move their forelimbs in a parasagittal plane, retracting the mobilised scapula during stance phase. Non-cursorial therian mammals often abduct the elbow out of the shoulder-hip parasagittal plane. This is especially prominent in Tamandua (Xenarthra), which suggests they employ aspects of sprawling (e.g., lizard-like-) locomotion. Here, we test if tamanduas use sprawling forelimb kinematics, i.e., a largely immobile scapula with pronounced lateral spine bending and long-axis rotation of the humerus. We analyse high speed videos and use X-ray motion analysis of tamanduas walking and balancing on branches of varying inclinations and provide a quantitative characterization of gaits and forelimb kinematics. Tamanduas displayed lateral sequence lateral-couplets gaits on flat ground and horizontal branches, but increased diagonality on steeper in- and declines, resulting in lateral sequence diagonal-couplets gaits. This result provides further evidence for high diagonality in arboreal species, likely maximising stability in arboreal environments. Further, the results reveal a mosaic of sprawling and parasagittal kinematic characteristics. The abducted elbow results from a constantly internally rotated scapula about its long axis and a retracted humerus. Scapula retraction contributes considerably to stride length. However, lateral rotation in the pectoral region of the spine (range: 21°) is higher than reported for other therian mammals. Instead, it is similar to skinks and alligators, indicating an aspect generally associated with sprawling locomotion is characteristic for forelimb kinematics of tamanduas. Our study contributes to a growing body of evidence of highly variable non-cursorial therian mammal locomotor kinematics.
Collapse
Affiliation(s)
- Adrian Scheidt
- AG Vergleichende Zoologie, Institut für Biologie, Humboldt Universität zu Berlin, Philippstraße 13, 10115 Berlin, Germany
| | - Paulo C Ditzel
- AG Vergleichende Zoologie, Institut für Biologie, Humboldt Universität zu Berlin, Philippstraße 13, 10115 Berlin, Germany
| | - Sandra M Geiger
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, An den Tierkliniken 43, 04103 Leipzig, Germany
| | - Franziska C Wagner
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, An den Tierkliniken 43, 04103 Leipzig, Germany
| | - Christoph K W Mülling
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, An den Tierkliniken 43, 04103 Leipzig, Germany
| | - John A Nyakatura
- AG Vergleichende Zoologie, Institut für Biologie, Humboldt Universität zu Berlin, Philippstraße 13, 10115 Berlin, Germany
| |
Collapse
|
3
|
Capano JG, Boback SM, Weller HI, Cieri RL, Zwemer CF, Brainerd EL. Modular lung ventilation in Boa constrictor. J Exp Biol 2022; 225:274764. [PMID: 35325925 DOI: 10.1242/jeb.243119] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Accepted: 02/11/2022] [Indexed: 12/13/2022]
Abstract
The evolution of constriction and of large prey ingestion within snakes are key innovations that may explain the remarkable diversity, distribution and ecological scope of this clade, relative to other elongate vertebrates. However, these behaviors may have simultaneously hindered lung ventilation such that early snakes may have had to circumvent these mechanical constraints before those behaviors could evolve. Here, we demonstrate that Boa constrictor can modulate which specific segments of ribs are used to ventilate the lung in response to physically hindered body wall motions. We show that the modular actuation of specific segments of ribs likely results from active recruitment or quiescence of derived accessory musculature. We hypothesize that constriction and large prey ingestion were unlikely to have evolved without modular lung ventilation because of their interference with lung ventilation, high metabolic demands and reliance on sustained lung convection. This study provides a new perspective on snake evolution and suggests that modular lung ventilation evolved during or prior to constriction and large prey ingestion, facilitating snakes' remarkable radiation relative to other elongate vertebrates.
Collapse
Affiliation(s)
- John G Capano
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| | - Scott M Boback
- Department of Biology, Dickinson College, Carlisle, PA 17013, USA
| | - Hannah I Weller
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| | - Robert L Cieri
- School of Science and Engineering, University of the Sunshine Coast, Maroochydore, QLD 4558, Australia
| | - Charles F Zwemer
- Department of Biology, Dickinson College, Carlisle, PA 17013, USA
| | - Elizabeth L Brainerd
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| |
Collapse
|
4
|
Radermacher VJ, Fernandez V, Schachner ER, Butler RJ, Bordy EM, Naylor Hudgins M, de Klerk WJ, Chapelle KE, Choiniere JN. A new Heterodontosaurus specimen elucidates the unique ventilatory macroevolution of ornithischian dinosaurs. eLife 2021; 10:66036. [PMID: 34225841 PMCID: PMC8260226 DOI: 10.7554/elife.66036] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 05/24/2021] [Indexed: 01/21/2023] Open
Abstract
Ornithischian dinosaurs were ecologically prominent herbivores of the Mesozoic Era that achieved a global distribution by the onset of the Cretaceous. The ornithischian body plan is aberrant relative to other ornithodiran clades, and crucial details of their early evolution remain obscure. We present a new, fully articulated skeleton of the early branching ornithischian Heterodontosaurus tucki. Phase-contrast enhanced synchrotron data of this new specimen reveal a suite of novel postcranial features unknown in any other ornithischian, with implications for the early evolution of the group. These features include a large, anteriorly projecting sternum; bizarre, paddle-shaped sternal ribs; and a full gastral basket – the first recovered in Ornithischia. These unusual anatomical traits provide key information on the evolution of the ornithischian body plan and suggest functional shifts in the ventilatory apparatus occurred close to the base of the clade. We complement these anatomical data with a quantitative analysis of ornithischian pelvic architecture, which allows us to make a specific, stepwise hypothesis for their ventilatory evolution. The fossilised skeletons of long extinct dinosaurs are more than just stones. By comparing these remains to their living relatives such as birds and crocodiles, palaeontologists can reveal how dinosaurs grew, moved, ate and socialised. Previous research indicates that dinosaurs were likely warm-blooded and also more active than modern reptiles. This means they would have required breathing mechanisms capable of supplying enough oxygen to allow these elevated activity levels. So far, much of our insight into dinosaur breathing biology has been biased towards dinosaur species more closely related to modern birds, such as Tyrannosaurus rex, as well as the long-necked sauropods. The group of herbivorous dinosaurs known as ornithischians, which include animals with head ornamentation, spikes and heavy body armour, like that found in Triceratops and Stegosaurus, have often been overlooked. As a result, there are still significant gaps in ornithischian biology, especially in understanding how they breathed. Radermacher et al. used high-powered X-rays to study a new specimen of the most primitive ornithischian dinosaur, Heterodontosaurus tucki, and discovered that this South African dinosaur has bones researchers did not know existed in this species. These include bones that are part of the breathing system of extant reptiles and birds, including toothpick-shaped bones called gastralia, paired sternal bones and sternal ribs shaped like tennis rackets. Together, these new pieces of anatomy form a complicated chest skeleton with a large range of motion that would have allowed the body to expand during breathing cycles. But this increased motion of the chest was only possible in more primitive ornithischians. More advanced species lost much of the anatomy that made this motion possible. Radermacher et al. show that while the chest was simpler in advanced species, their pelvis was more specialised and likely played a role in breathing as it does in modern crocodiles. This new discovery could inform the work of biologists who study the respiratory diversity of both living and extinct species. Differences in breathing strategies might be one of the underlying reasons that some lineages of animals go extinct. It could explain why some species do better than others under stressful conditions, like when the climate is warmer or has less oxygen.
Collapse
Affiliation(s)
- Viktor J Radermacher
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa.,Department of Earth and Environmental Sciences, University of Minnesota, Minneapolis, United States
| | - Vincent Fernandez
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa.,European Synchrotron Radiation Facility, Grenoble, France.,Natural History Museum, Imaging and Analysis Centre, London, United Kingdom
| | - Emma R Schachner
- Department of Cell Biology & Anatomy, School of Medicine, Louisiana State University Health Sciences Center, New Orleans, United States
| | - Richard J Butler
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa.,School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham, United Kingdom
| | - Emese M Bordy
- Department of Geological Sciences, University of Cape Town, Cape Town, South Africa
| | | | - William J de Klerk
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa.,Department of Earth Sciences, Albany Museum, Grahamstown, South Africa
| | - Kimberley Ej Chapelle
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa.,Division of Paleontology, American Museum of Natural History, New York, United States
| | - Jonah N Choiniere
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa
| |
Collapse
|
5
|
Abstract
X-Ray Reconstruction of Moving Morphology (XROMM), though traditionally used for studies of in vivo skeletal kinematics, can also be used to precisely and accurately measure ex vivo range of motion from cadaveric manipulations. The workflow for these studies is holistically similar to the in vivo XROMM workflow but presents several unique challenges. This paper aims to serve as a practical guide by walking through each step of the ex vivo XROMM process: how to acquire and prepare cadaveric specimens, how to manipulate specimens to collect X-ray data, and how to use these data to compute joint rotational mobility. Along the way, it offers recommendations for best practices and for avoiding common pitfalls to ensure a successful study.
Collapse
Affiliation(s)
- Armita R Manafzadeh
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| |
Collapse
|
6
|
Capano JG. Reaction Forces and Rib Function During Locomotion in Snakes. Integr Comp Biol 2020; 60:215-231. [PMID: 32396605 DOI: 10.1093/icb/icaa033] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Locomotion in most tetrapods involves coordinated efforts between appendicular and axial musculoskeletal systems, where interactions between the limbs and the ground generate vertical (GV), horizontal (GH), and mediolateral (GML) ground-reaction forces that are transmitted to the axial system. Snakes have a complete absence of external limbs and represent a fundamental shift from this perspective. The axial musculoskeletal system of snakes is their primary structure to exert, transmit, and resist all motive and reaction forces for propulsion. Their lack of limbs makes them particularly dependent on the mechanical interactions between their bodies and the environment to generate the net GH they need for forward locomotion. As organisms that locomote on their bellies, the forces that enable the various modes of snake locomotion involve two important structures: the integument and the ribs. Snakes use the integument to contact the substrate and produce a friction-reservoir that exceeds their muscle-induced propulsive forces through modulation of scale stiffness and orientation, enabling propulsion through variable environments. XROMM work and previous studies suggest that the serially repeated ribs of snakes change their cross-sectional body shape, deform to environmental irregularities, provide synergistic stabilization for other muscles, and differentially exert and transmit forces to control propulsion. The costovertebral joints of snakes have a biarticular morphology, relative to the unicapitate costovertebral joints of other squamates, that appears derived and not homologous with the ancestral bicapitate ribs of Amniota. Evidence suggests that the biarticular joints of snakes may function to buttress locomotor forces, similar to other amniotes, and provide a passive mechanism for resisting reaction forces during snake locomotion. Future comparisons with other limbless lizard taxa are necessary to tease apart the mechanics and mechanisms that produced the locomotor versatility observed within Serpentes.
Collapse
Affiliation(s)
- John G Capano
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| |
Collapse
|
7
|
Cieri RL, Hatch ST, Capano JG, Brainerd EL. Locomotor rib kinematics in two species of lizards and a new hypothesis for the evolution of aspiration breathing in amniotes. Sci Rep 2020; 10:7739. [PMID: 32398656 PMCID: PMC7217971 DOI: 10.1038/s41598-020-64140-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2019] [Accepted: 04/08/2020] [Indexed: 11/09/2022] Open
Abstract
Most lizards walk and run with a sprawling gait in which the limbs are partly advanced by lateral undulation of the axial skeleton. Ribs and vertebrae are integral to this locomotor mode, but 3D motion of the axial skeleton has not been reported for lizard locomotion. Here, we use XROMM to quantify the relative motions of the vertebrae and ribs during slow treadmill locomotion in three savannah monitor lizards (Varanus exanthematicus) and three Argentine black and white tegus (Salvator merianae). To isolate locomotion, we selected strides with no concurrent lung ventilation. Rib rotations can be decomposed into bucket-handle rotation around a dorsoventral axis, pump-handle rotation around a mediolateral axis, and caliper rotations around a craniocaudal axis. During locomotion, every rib measured in both species rotated substantially around its costovertebral joint (8-17 degrees, summed across bucket, pump and caliper rotations). In all individuals from both species, the middle ribs rotated cranially through bucket and pump-handle motion during the propulsive phase of the ipsilateral forelimb. Axial kinematics during swing phase of the ipsilateral forelimb were mirror images of the propulsive phase. Although further work is needed to establish what causes these rib motions, active contraction of the hypaxial musculature may be at least partly responsible. Unilateral locomotor rib movements are remarkably similar to the bilateral pattern used for lung ventilation, suggesting a new hypothesis that rib motion during locomotion may have been an exaptation for the evolution of costal aspiration breathing in stem amniotes.
Collapse
Affiliation(s)
- Robert L Cieri
- School of Biological Sciences, University of Utah, Salt Lake City, UT, 84112, USA.
| | - Samuel T Hatch
- School of Biological Sciences, University of Utah, Salt Lake City, UT, 84112, USA
| | - John G Capano
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI, 02906, USA
| | - Elizabeth L Brainerd
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI, 02906, USA
| |
Collapse
|
8
|
Cieri RL, Farmer C. Computational Fluid Dynamics Reveals a Unique Net Unidirectional Pattern of Pulmonary Airflow in the Savannah Monitor Lizard (
Varanus exanthematicus
). Anat Rec (Hoboken) 2019; 303:1768-1791. [DOI: 10.1002/ar.24293] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Revised: 10/04/2019] [Accepted: 10/07/2019] [Indexed: 01/20/2023]
Affiliation(s)
- Robert L. Cieri
- School of Biological Sciences University of Utah Salt Lake City Utah
| | - C.G. Farmer
- School of Biological Sciences University of Utah Salt Lake City Utah
| |
Collapse
|
9
|
Brocklehurst RJ, Moritz S, Codd J, Sellers WI, Brainerd EL. XROMM kinematics of ventilation in wild turkeys ( Meleagris gallopavo). ACTA ACUST UNITED AC 2019; 222:jeb.209783. [PMID: 31704902 DOI: 10.1242/jeb.209783] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2019] [Accepted: 10/30/2019] [Indexed: 12/17/2022]
Abstract
The avian ribcage is derived relative to other amniotes, and is hypothesised to be constrained in its movements during ventilation. The double-headed ribs form two articulations with the vertebrae, and are thought to rotate about a strict anatomical axis. However, this costovertebral joint constraint has not been demonstrated empirically and was not found in other taxa with double-headed ribs (i.e. crocodilians). Here, we used X-ray reconstruction of moving morphology (XROMM) to quantify rib rotation in wild turkeys (Meleagris gallopavo) during breathing. We demonstrate that, as predicted from anatomy, the ribs do rotate in a hinge-like manner about a single axis. There is also evidence for elliptical motion of the sternum, as has been reported in other taxa. The evolution of the avian ribcage is closely related to the co-evolution of ventilation and flight, and these results are important for how we model ventilation mechanics in living and fossil birds.
Collapse
Affiliation(s)
- Robert J Brocklehurst
- School of Earth and Environmental Sciences, University of Manchester, Manchester M13 9PT, UK
| | - Sabine Moritz
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA.,Department of Biology, Community College of Rhode Island, Warwick, RI 02886, USA
| | - Jonathan Codd
- Faculty of Biology, Medicine and Health, University of Manchester, Manchester M13 9PT, UK
| | - William I Sellers
- School of Earth and Environmental Sciences, University of Manchester, Manchester M13 9PT, UK
| | - Elizabeth L Brainerd
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| |
Collapse
|
10
|
Olsen AM. A mobility-based classification of closed kinematic chains in biomechanics and implications for motor control. ACTA ACUST UNITED AC 2019; 222:222/21/jeb195735. [PMID: 31694932 DOI: 10.1242/jeb.195735] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Closed kinematic chains (CKCs), links connected to form one or more closed loops, are used as simple models of musculoskeletal systems (e.g. the four-bar linkage). Previous applications of CKCs have primarily focused on biomechanical systems with rigid links and permanently closed chains, which results in constant mobility (the total degrees of freedom of a system). However, systems with non-rigid elements (e.g. ligaments and muscles) and that alternate between open and closed chains (e.g. standing on one foot versus two) can also be treated as CKCs with changing mobility. Given that, in general, systems that have fewer degrees of freedom are easier to control, what implications might such dynamic changes in mobility have for motor control? Here, I propose a CKC classification to explain the different ways in which mobility of musculoskeletal systems can change dynamically during behavior. This classification is based on the mobility formula, taking into account the number of loops in the CKC and the nature of the constituent joint mobilities. I apply this mobility-based classification to five biomechanical systems: the human lower limbs, the operculum-lower jaw mechanism of fishes, the upper beak rotation mechanism of birds, antagonistic muscles at the human ankle joint and the human jaw processing a food item. I discuss the implications of this classification, including that mobility itself may be dynamically manipulated to simplify motor control. The principal aim of this Commentary is to provide a framework for quantifying mobility across diverse musculoskeletal systems to evaluate its potentially key role in motor control.
Collapse
Affiliation(s)
- Aaron M Olsen
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| |
Collapse
|
11
|
Capano JG, Moritz S, Cieri RL, Reveret L, Brainerd EL. Rib Motions Don't Completely Hinge on Joint Design: Costal Joint Anatomy and Ventilatory Kinematics in a Teiid Lizard, Salvator merianae. Integr Org Biol 2019; 1:oby004. [PMID: 33791512 PMCID: PMC7780499 DOI: 10.1093/iob/oby004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Rib rotations contribute to lung ventilation in most extant amniotes. These rotations are typically described as bucket-handle rotation about a dorsoventral axis, caliper rotation about a craniocaudal axis, and pump-handle rotation about a mediolateral axis. A synapomorphy for Lepidosauria is single-headed costovertebral articulations derived from the ancestral double-headed articulations of most amniotes. With a single articular surface, the costovertebral joints of squamates have the potential to rotate with three degrees-of-freedom (DOFs), but considerable variation exists in joint shape. We compared the costovertebral morphology of the Argentine black and white tegu, Salvator merianae, with the green iguana, Iguana iguana, and found that the costovertebral articulations of I. iguana were hemispherical, while those of S. merianae were dorsoventrally elongated and hemiellipsoidal. We predicted that the elongate joints in S. merianae would permit bucket-handle rotations while restricting caliper and pump-handle rotations, relative to the rounded joints of I. iguana. We used X-ray reconstruction of moving morphology to quantify rib rotations during breathing in S. merianae for comparison with prior work in I. iguana. Consistent with our hypothesis, we found less caliper motion in S. merianae than in I. iguana, but unexpectedly found similar pump-handle magnitudes in each species. The dorsoventrally elongate costovertebral morphology of S. merianae may provide passive rib support to reduce the conflict between locomotion and ventilation. Moreover, the observation of multiple DOFs during rib rotations in both species suggests that permissive costovertebral morphology may be more related to the biological roles of ribs outside of ventilation and help explain the evolution of this trait.
Collapse
Affiliation(s)
- J G Capano
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02906, USA
| | - S Moritz
- Department of Biology, Community College of Rhode Island, Warwick, RI 02886, USA
| | - R L Cieri
- School of Biological Sciences, University of Utah, Salt Lake City, UT 84112, USA
| | - L Reveret
- Inria Grenoble Rhone Alpes, 655 Avenue de l'Europe, 38330 Montbonnot-Saint-Martin, France
| | - E L Brainerd
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02906, USA
| |
Collapse
|
12
|
Callison WÉ, Holowka NB, Lieberman DE. Thoracic adaptations for ventilation during locomotion in humans and other mammals. J Exp Biol 2019; 222:jeb.189357. [DOI: 10.1242/jeb.189357] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Accepted: 10/01/2019] [Indexed: 11/20/2022]
Abstract
Bipedal humans, like canids and some other cursorial mammals, are thought to have been selected for endurance running, which requires the ability to sustain aerobic metabolism over long distances by inspiring large volumes of air for prolonged periods of time. Here we test the general hypothesis that humans and other mammals selected for vigorous endurance activities evolved derived thoracic features to increase ventilatory capacity. To do so, we investigate whether humans and dogs rely on thoracic motion to increase tidal volume during running to a greater extent than goats, a species that was not selected for endurance locomotion. We found that while all three species use diaphragmatic breathing to increase tidal volume with increasing oxygen demand, humans also use both dorsoventral and mediolateral expansions of the thorax. Dogs use increased dorsoventral expansion of the thorax, representing an intermediate between humans and goats. 3D analyses of joint morphology of 10 species across four mammalian orders also show that endurance-adapted cursorial species independently evolved more concavo-convex costovertebral joint morphologies that allow for increased rib mobility for thoracic expansion. Evidence for similarly derived concavo-convex costovertebral joints in Homo erectus corresponds with other evidence for the evolution of endurance running in the genus Homo.
Collapse
Affiliation(s)
- W. Éamon Callison
- Department of Human Evolutionary Biology, Harvard University, 11 Divinity Avenue, Cambridge, MA, USA
| | - Nicholas B. Holowka
- Department of Human Evolutionary Biology, Harvard University, 11 Divinity Avenue, Cambridge, MA, USA
| | - Daniel E. Lieberman
- Department of Human Evolutionary Biology, Harvard University, 11 Divinity Avenue, Cambridge, MA, USA
| |
Collapse
|
13
|
Weiss M, Hainke K, Grund S, Gerlach K, Mülling CKW, Geiger SM. Does the range of motion in the bovine interphalangeal joints change with flooring condition? A pilot study using biplane high-speed fluoroscopic kinematography. J Dairy Sci 2018; 102:1443-1456. [PMID: 30591344 DOI: 10.3168/jds.2018-14844] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Accepted: 11/03/2018] [Indexed: 11/19/2022]
Abstract
This study had 2 objectives. The first objective was to investigate motion patterns and the range of motion of the bovine proximal and distal interphalangeal joints on concrete during the stance phase. The second objective was to determine whether the range of motion and the locomotive stability of the interphalangeal joints differ on concrete and 3 different commercially available rubber mats (Karera, Kura, and Pedikura; Kraiburg Elastik GmbH & Co. KG, Tittmoning, Germany). Biplane high-speed fluoroscopic kinematography (72 ± 2.5 kV and 112.5 ± 12.5 mA, refresh rate 500 frames per second, shutter 0.5 ms) was applied to record 1 stance phase of the right forelimb of 2 Holstein Friesian heifers (15 mo old, 440 ± 10 kg; ± standard deviation) on each flooring. Three-dimensional digital animations were generated with a marker-supported manual animation technique based on the recordings and computer tomographic bone models. The mean maximum range of motion of each of the 4 interphalangeal joints in terms of flexion/extension, abduction/adduction, and internal/external rotation were calculated as well as the mean number of local extrema as a measure of stability during the stance phase. The main degree of freedom in all interphalangeal joints was flexion and extension with a range of motion of 17.7 to 25.9°. The second largest degree of freedom differed between abduction/adduction (7.7-10.0°) and internal/external rotation (6.5-9.6°) depending on the joint. Remarkably, although smaller, these extrasagittal directions still contribute to the overall motion to a considerable degree. In addition, the interphalangeal joints of the lateral digit showed a tendency to move less during the stance phase than their medial counterparts. Comparing concrete to the rubber mats, the interphalangeal joints tend to have to cover a larger range of motion on concrete with the exception of the distal interphalangeal joint in terms of flexion/extension. The unyielding surface of concrete seems to force the flexible parts of the animal-ground-interaction into extended motion. Furthermore, there tends to be more instability in all 3 degrees of freedom in all 4 joints on concrete, implying a greater effort of the soft tissues to achieve a balanced motion. Detailed biomechanical research contributes to the development of adequate flooring systems by evaluating the mechanical strain on claws and joints and working toward lameness prevention and thus animal welfare.
Collapse
Affiliation(s)
- M Weiss
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, D-04103 Leipzig, Germany
| | - K Hainke
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, D-04103 Leipzig, Germany
| | - S Grund
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, D-04103 Leipzig, Germany
| | - K Gerlach
- Department for Horses, Faculty of Veterinary Medicine, Leipzig University, D-04103 Leipzig, Germany
| | - C K W Mülling
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, D-04103 Leipzig, Germany
| | - S M Geiger
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, D-04103 Leipzig, Germany; Institute of Topographic Anatomy, University of Veterinary Medicine Vienna, A-1210 Vienna.
| |
Collapse
|
14
|
Baier DB, Garrity BM, Moritz S, Carney RM. Alligator mississippiensis sternal and shoulder girdle mobility increase stride length during high walks. ACTA ACUST UNITED AC 2018; 221:jeb.186791. [PMID: 30266782 DOI: 10.1242/jeb.186791] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Accepted: 09/20/2018] [Indexed: 01/06/2023]
Abstract
Crocodilians have played a significant role in evolutionary studies of archosaurs. Given that several major shifts in forelimb function occur within Archosauria, forelimb morphologies of living crocodilians are of particular importance in assessing locomotor evolutionary scenarios. A previous X-ray investigation of walking alligators revealed substantial movement of the shoulder girdle, but as the sternal cartilages do not show up in X-ray, the source of the mobility could not be conclusively determined. Scapulocoracoid movement was interpreted to indicate independent sliding of each coracoid at the sternocoracoid joint; however, rotations of the sternum could also produce similar displacement of the scapulocoracoids. Here, we present new data employing marker-based XROMM (X-ray reconstruction of moving morphology), wherein simultaneous biplanar X-ray video and surgically implanted radio-opaque markers permit precise measurement of the vertebral axis, sternum and coracoid in walking alligators. We found that movements of the sternum and sternocoracoid joint both contribute to shoulder girdle mobility and stride length, and that the sternocoracoid contribution was less than previously estimated. On average, the joint contributions to stride length (measured with reference to a point on the distal radius, thus excluding wrist motion) are as follows: thoracic vertebral rotation 6.2±3.7%, sternal rotation 11.1±2.5%, sternocoracoid joint 10.1±5.2%, glenohumeral joint 40.1±7.8% and elbow 31.1±4.2%. To our knowledge, this is the first evidence of sternal movement relative to the vertebral column (presumably via rib joints) contributing to stride length in tetrapods.
Collapse
Affiliation(s)
- David B Baier
- Providence College, Department of Biology, Providence, RI 02918, USA
| | - Brigid M Garrity
- Boston University, School of Graduate Medical Science and School of Public Health, Boston, MA 02118, USA
| | - Sabine Moritz
- Brown University, Ecology and Evolutionary Biology, Providence, RI 02912, USA
| | - Ryan M Carney
- University of South Florida, Department of Integrative Biology, Tampa, FL 33620, USA
| |
Collapse
|
15
|
Cieri RL, Moritz S, Capano JG, Brainerd EL. Breathing with floating ribs: XROMM analysis of lung ventilation in savannah monitor lizards. ACTA ACUST UNITED AC 2018; 221:jeb.189449. [PMID: 30257921 DOI: 10.1242/jeb.189449] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 09/20/2018] [Indexed: 11/20/2022]
Abstract
The structures and functions of the vertebrate lung and trunk are linked through the act of ventilation, but the connections between these structures and functions are poorly understood. We used X-ray reconstruction of moving morphology (XROMM) to measure rib kinematics during lung ventilation in three savannah monitor lizards (Varanus exanthematicus). All of the dorsal ribs, including the floating ribs, contributed to ventilation; the magnitude and kinematic pattern showed no detectable cranial-to-caudal gradient. The true ribs acted as two rigid bodies connected by flexible cartilage, with the vertebral rib and ventromedial shaft of each sternal rib remaining rigid and the cartilage between them forming a flexible intracostal joint. Rib rotations can be decomposed into bucket handle rotation around a dorsoventral axis, pump handle rotation around a mediolateral axis and caliper motion around a craniocaudal axis. Dorsal rib motion was dominated by roughly equal contributions of bucket and pump rotation in two individuals and by bucket rotation in the third individual. The recruitment of floating ribs during ventilation in monitor lizards is strikingly different from the situation in iguanas, where only the first few true ribs contribute to breathing. This difference may be related to the design of the pulmonary system and life history traits in these two species. Motion of the floating ribs may maximize ventilation of the caudally and ventrolaterally positioned compliant saccular chambers in the lungs of varanids, while restriction of ventilation to a few true ribs may maximize crypsis in iguanas.
Collapse
Affiliation(s)
- Robert L Cieri
- Department of Biology, University of Utah, Salt Lake City, UT 84112, USA
| | - Sabine Moritz
- Department of Biology, Community College of Rhode Island, Warwick, RI 02886, USA
| | - John G Capano
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| | - Elizabeth L Brainerd
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| |
Collapse
|
16
|
Brocklehurst RJ, Moritz S, Codd J, Sellers WI, Brainerd EL. Rib kinematics during lung ventilation in the American alligator ( Alligator mississippiensis): an XROMM analysis. ACTA ACUST UNITED AC 2018; 220:3181-3190. [PMID: 28855323 PMCID: PMC5612015 DOI: 10.1242/jeb.156166] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2017] [Accepted: 06/15/2017] [Indexed: 11/20/2022]
Abstract
The current hypothesis regarding the mechanics of breathing in crocodylians is that the double-headed ribs, with both a capitulum and tuberculum, rotate about a constrained axis passing through the two articulations; moreover, this axis shifts in the caudal thoracic ribs, as the vertebral parapophysis moves from the centrum to the transverse process. Additionally, the ventral ribcage in crocodylians is thought to possess additional degrees of freedom through mobile intermediate ribs. In this study, X-ray reconstruction of moving morphology (XROMM) was used to quantify rib rotation during breathing in American alligators. Whilst costovertebral joint anatomy predicted overall patterns of motion across the ribcage (decreased bucket handle motion and increased calliper motion), there were significant deviations: anatomical axes overestimated pump handle motion and, generally, ribs in vivo rotate about all three body axes more equally than predicted. The intermediate ribs are mobile, with a high degree of rotation measured about the dorsal intracostal joints, especially in the more caudal ribs. Motion of the sternal ribs became increasingly complex caudally, owing to a combination of the movements of the vertebral and intermediate segments. As the crocodylian ribcage is sometimes used as a model for the ancestral archosaur, these results have important implications for how rib motion is reconstructed in fossil taxa, and illustrate the difficulties in reconstructing rib movement based on osteology alone. Summary: Using XROMM to test how well joint anatomy predicts rib motion during breathing in crocodylians, our best living model for the earliest archosaurs.
Collapse
Affiliation(s)
- Robert J Brocklehurst
- School of Earth and Environmental Sciences, University of Manchester, Manchester M13 9PT, UK
| | - Sabine Moritz
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| | - Jonathan Codd
- Faculty of Biology, Medicine and Health, University of Manchester, Manchester M13 9PT, UK
| | - William I Sellers
- School of Earth and Environmental Sciences, University of Manchester, Manchester M13 9PT, UK
| | - Elizabeth L Brainerd
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA
| |
Collapse
|
17
|
Sheehan FT, Brainerd EL, Troy KL, Shefelbine SJ, Ronsky JL. Advancing quantitative techniques to improve understanding of the skeletal structure-function relationship. J Neuroeng Rehabil 2018; 15:25. [PMID: 29558970 PMCID: PMC5859431 DOI: 10.1186/s12984-018-0368-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Accepted: 03/07/2018] [Indexed: 12/13/2022] Open
Abstract
Although all functional movement arises from the interplay between the neurological, skeletal, and muscular systems, it is the skeletal system that forms the basic framework for functional movement. Central to understanding human neuromuscular development, along with the genesis of musculoskeletal pathologies, is quantifying how the human skeletal system adapts and mal-adapts to its mechanical environment. Advancing this understanding is hampered by an inability to directly and non-invasively measure in vivo strains, stresses, and forces on bone. Thus, we traditionally have turned to animal models to garner such information. These models enable direct in vivo measures that are not available for human subjects, providing information in regards to both skeletal adaptation and the interplay between the skeletal and muscular systems. Recently, there has been an explosion of new imaging and modeling techniques providing non-invasive, in vivo measures and estimates of skeletal form and function that have long been missing. Combining multiple modalities and techniques has proven to be one of our most valuable resources in enhancing our understanding of the form-function relationship of the human skeletal, muscular, and neurological systems. Thus, to continue advancing our knowledge of the structural-functional relationship, validation of current tools is needed, while development is required to limit the deficiencies in these tools and develop new ones.
Collapse
Affiliation(s)
| | | | - Karen L Troy
- Worcester Polytechnic Institute, Worcester, MA, USA
| | | | | |
Collapse
|
18
|
Kambic RE, Biewener AA, Pierce SE. Experimental determination of three-dimensional cervical joint mobility in the avian neck. Front Zool 2017; 14:37. [PMID: 28747987 PMCID: PMC5525307 DOI: 10.1186/s12983-017-0223-z] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Accepted: 07/11/2017] [Indexed: 11/16/2022] Open
Abstract
Background Birds have highly mobile necks, but neither the details of how they realize complex poses nor the evolution of this complex musculoskeletal system is well-understood. Most previous work on avian neck function has focused on dorsoventral flexion, with few studies quantifying lateroflexion or axial rotation. Such data are critical for understanding joint function, as musculoskeletal movements incorporate motion around multiple degrees of freedom simultaneously. Here we use biplanar X-rays on wild turkeys to quantify three-dimensional cervical joint range of motion in an avian neck to determine patterns of mobility along the cranial-caudal axis. Results Range of motion can be generalized to a three-region model: cranial joints are ventroflexed with high axial and lateral mobility, caudal joints are dorsiflexed with little axial rotation but high lateroflexion, and middle joints show varying amounts axial rotation and a low degree of lateroflexion. Nonetheless, variation within and between regions is high. To attain complex poses, substantial axial rotation can occur at joints caudal to the atlas/axis complex and zygapophyseal joints can reduce their overlap almost to osteological disarticulation. Degrees of freedom interact at cervical joints; maximum lateroflexion occurs at different dorsoventral flexion angles at different joints, and axial rotation and lateroflexion are strongly coupled. Further, patterns of joint mobility are strongly predicted by cervical morphology. Conclusion Birds attain complex neck poses through a combination of mobile intervertebral joints, coupled rotations, and highly flexible zygapophyseal joints. Cranial-caudal patterns of joint mobility are tightly linked to cervical morphology, such that function can be predicted by form. The technique employed here provides a repeatable protocol for studying neck function in a broad array of taxa that will be directly comparable. It also serves as a foundation for future work on the evolution of neck mobility along the line from non-avian theropod dinosaurs to birds. Electronic supplementary material The online version of this article (doi:10.1186/s12983-017-0223-z) contains supplementary material, which is available to authorized users.
Collapse
Affiliation(s)
- Robert E Kambic
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138 USA.,Concord Field Station, Department of Organismic and Evolutionary Biology, Harvard University, Bedford, MA 01730 USA
| | - Andrew A Biewener
- Concord Field Station, Department of Organismic and Evolutionary Biology, Harvard University, Bedford, MA 01730 USA
| | - Stephanie E Pierce
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138 USA
| |
Collapse
|
19
|
Camp AL, Astley HC, Horner AM, Roberts TJ, Brainerd EL. Fluoromicrometry: A Method for Measuring Muscle Length Dynamics with Biplanar Videofluoroscopy. ACTA ACUST UNITED AC 2016; 325:399-408. [DOI: 10.1002/jez.2031] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2016] [Revised: 07/11/2016] [Accepted: 07/11/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Ariel L. Camp
- Department of Ecology & Evolutionary Biology Brown University Providence Rhode Island
| | - Henry C. Astley
- Biomimicry Research & Innovation Center Department of Biology & Polymer Science University of Akron Akron Ohio
| | - Angela M. Horner
- Department of Biology California State University San Bernardino San Bernardino California
| | - Thomas J. Roberts
- Department of Ecology & Evolutionary Biology Brown University Providence Rhode Island
| | - Elizabeth L. Brainerd
- Department of Ecology & Evolutionary Biology Brown University Providence Rhode Island
| |
Collapse
|
20
|
Panagiotopoulou O, Rankin JW, Gatesy SM, Hutchinson JR. A preliminary case study of the effect of shoe-wearing on the biomechanics of a horse's foot. PeerJ 2016; 4:e2164. [PMID: 27478694 PMCID: PMC4950542 DOI: 10.7717/peerj.2164] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Accepted: 06/01/2016] [Indexed: 11/20/2022] Open
Abstract
Horse racing is a multi-billion-dollar industry that has raised welfare concerns due to injured and euthanized animals. Whilst the cause of musculoskeletal injuries that lead to horse morbidity and mortality is multifactorial, pre-existing pathologies, increased speeds and substrate of the racecourse are likely contributors to foot disease. Horse hooves have the ability to naturally deform during locomotion and dissipate locomotor stresses, yet farriery approaches are utilised to increase performance and protect hooves from wear. Previous studies have assessed the effect of different shoe designs on locomotor performance; however, no biomechanical study has hitherto measured the effect of horseshoes on the stresses of the foot skeleton in vivo. This preliminary study introduces a novel methodology combining three-dimensional data from biplanar radiography with inverse dynamics methods and finite element analysis (FEA) to evaluate the effect of a stainless steel shoe on the function of a Thoroughbred horse's forefoot during walking. Our preliminary results suggest that the stainless steel shoe shifts craniocaudal, mediolateral and vertical GRFs at mid-stance. We document a similar pattern of flexion-extension in the PIP (pastern) and DIP (coffin) joints between the unshod and shod conditions, with slight variation in rotation angles throughout the stance phase. For both conditions, the PIP and DIP joints begin in a flexed posture and extend over the entire stance phase. At mid-stance, small differences in joint angle are observed in the PIP joint, with the shod condition being more extended than the unshod horse, whereas the DIP joint is extended more in the unshod than the shod condition. We also document that the DIP joint extends more than the PIP after mid-stance and until the end of the stance in both conditions. Our FEA analysis, conducted solely on the bones, shows increased von Mises and Maximum principal stresses on the forefoot phalanges in the shod condition at mid-stance, consistent with the tentative conclusion that a steel shoe might increase mechanical loading. However, because of our limited sample size none of these apparent differences have been tested for statistical significance. Our preliminary study illustrates how the shoe may influence the dynamics and mechanics of a Thoroughbred horse's forefoot during slow walking, but more research is needed to quantify the effect of the shoe on the equine forefoot during the whole stance phase, at faster speeds/gaits and with more individuals as well as with a similar focus on the hind feet. We anticipate that our preliminary analysis using advanced methodological approaches will pave the way for new directions in research on the form/function relationship of the equine foot, with the ultimate goal to minimise foot injuries and improve animal health and welfare.
Collapse
Affiliation(s)
- Olga Panagiotopoulou
- Structure & Motion Laboratory, Department of Comparative Biomedical Sciences, The Royal Veterinary College, Hatfield, Hertfordshire, United Kingdom
- Moving Morphology & Functional Mechanics Laboratory, School of Biomedical Sciences, Faculty of Medicine and Biomedical Sciences, The University of Queensland, Brisbane, Australia
| | - Jeffery W. Rankin
- Structure & Motion Laboratory, Department of Comparative Biomedical Sciences, The Royal Veterinary College, Hatfield, Hertfordshire, United Kingdom
| | - Stephen M. Gatesy
- Department of Ecology and Evolutionary Biology, Brown University, Providence, RI, USA
| | - John R. Hutchinson
- Structure & Motion Laboratory, Department of Comparative Biomedical Sciences, The Royal Veterinary College, Hatfield, Hertfordshire, United Kingdom
- Moving Morphology & Functional Mechanics Laboratory, School of Biomedical Sciences, Faculty of Medicine and Biomedical Sciences, The University of Queensland, Brisbane, Australia
| |
Collapse
|
21
|
Knörlein BJ, Baier DB, Gatesy SM, Laurence-Chasen JD, Brainerd EL. Validation of XMALab software for marker-based XROMM. J Exp Biol 2016; 219:3701-3711. [DOI: 10.1242/jeb.145383] [Citation(s) in RCA: 120] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2016] [Accepted: 09/20/2016] [Indexed: 11/20/2022]
Abstract
Marker-based XROMM requires software tools for: 1) correcting fluoroscope distortion; 2) calibrating X-ray cameras; 3) tracking radio-opaque markers; and 4) calculating rigid body motion. In this paper we describe and validate XMALab, a new open-source software package for marker-based XROMM (C++ source and compiled versions on Bitbucket). Most marker-based XROMM studies to date have used XrayProject in MATLAB. XrayProject can produce results with excellent accuracy and precision, but it is somewhat cumbersome to use and requires a MATLAB license. We have designed XMALab to accelerate the XROMM process and to make it more accessible to new users. Features include the four XROMM steps (listed above) in one cohesive user interface, real-time plot windows for detecting errors, and integration with an online data management system, XMAPortal. Accuracy and precision of XMALab when tracking markers in a machined object are ±0.010 and ±0.043 mm, respectively. Mean precision for nine users tracking markers in a tutorial dataset of minipig feeding was ±0.062 mm in XMALab and ±0.14 mm in XrayProject. Reproducibility of 3D point locations across nine users was tenfold greater in XMALab than in XrayProject, and six degree-of-freedom bone motions calculated with a joint coordinate system were three- to sixfold more reproducible in XMALab. XMALab is also suitable for tracking white or black markers in standard light videos with optional checkerboard calibration. We expect XMALab to increase both the quality and quantity of animal motion data available for comparative biomechanics research.
Collapse
Affiliation(s)
| | - David B. Baier
- Department of Biology, Providence College, Providence RI, USA
- Department of Ecology and Evolutionary Biology, Brown University, Providence RI, USA
| | - Stephen M. Gatesy
- Department of Ecology and Evolutionary Biology, Brown University, Providence RI, USA
| | - J. D. Laurence-Chasen
- Department of Ecology and Evolutionary Biology, Brown University, Providence RI, USA
| | - Elizabeth L. Brainerd
- Department of Ecology and Evolutionary Biology, Brown University, Providence RI, USA
| |
Collapse
|