Polarisation signals: a new currency for communication

Learning a global underwater geolocalization model with sectoral transformer

Polarization-based underwater geolocalization presents an innovative method for positioning unmanned autonomous devices beneath the water surface, in environments where GPS signals are ineffective. While the state-of-the-art deep neural network (DNN) method achieves high-precision geolocalization based on sun polarization patterns in same-site tasks, its learning-based nature limits its generalizability to unseen sites and subsequently impairs its performance on cross-site tasks, where an unavoidable domain gap between training and test data exists. In this paper, we present an advanced Deep Neural Network (DNN) methodology, which includes a neural network built on a Transformer architecture, similar to the core of large language models such as ChatGPT, and integrates an unscented Kalman filter (UKF) for estimating underwater geolocation using polarization-based images. This combination effectively simulates the sun's daily trajectory, yielding enhanced performance across different locations and quicker inference speeds compared to current benchmarks. Following thorough analysis of over 10 million polarization images from four global locations, we conclude that our proposed technique significantly boosts cross-site geolocalization accuracy by around 28% when contrasted with traditional DNN methods.

The Sensory Ecology of Speciation

In this work, we explore the potential influence of sensory ecology on speciation, including but not limited to the concept of sensory drive, which concerns the coevolution of signals and sensory systems with the local environment. The sensory environment can influence individual fitness in a variety of ways, thereby affecting the evolution of both pre- and postmating reproductive isolation. Previous work focused on sensory drive has undoubtedly advanced the field, but we argue that it may have also narrowed our understanding of the broader influence of the sensory ecology on speciation. Moreover, the clearest examples of sensory drive are largely limited to aquatic organisms, which may skew the influence of contributing factors. We review the evidence for sensory drive across environmental conditions, and in this context discuss the importance of more generalized effects of sensory ecology on adaptive behavioral divergence. Finally, we consider the potential of rapid environmental change to influence reproductive barriers related to sensory ecologies. Our synthesis shows the importance of sensory conditions for local adaptation and divergence in a range of behavioral contexts and extends our understanding of the interplay between sensory ecology and speciation.

P-MIRU, a Polarized Multispectral Imaging System, Reveals Reflection Information on the Biological Surface

Reflection light forms the core of our visual perception of the world. We can obtain vast information by examining reflection light from biological surfaces, including pigment composition and distribution, tissue structure and surface microstructure. However, because of the limitations in our visual system, the complete information in reflection light, which we term 'reflectome', cannot be fully exploited. For example, we may miss reflection light information outside our visible wavelengths. In addition, unlike insects, we have virtually no sensitivity to light polarization. We can detect non-chromatic information lurking in reflection light only with appropriate devices. Although previous studies have designed and developed systems for specialized uses supporting our visual systems, we still do not have a versatile, rapid, convenient and affordable system for analyzing broad aspects of reflection from biological surfaces. To overcome this situation, we developed P-MIRU, a novel multispectral and polarization imaging system for reflecting light from biological surfaces. The hardware and software of P-MIRU are open source and customizable and thus can be applied for virtually any research on biological surfaces. Furthermore, P-MIRU is a user-friendly system for biologists with no specialized programming or engineering knowledge. P-MIRU successfully visualized multispectral reflection in visible/non-visible wavelengths and simultaneously detected various surface phenotypes of spectral polarization. The P-MIRU system extends our visual ability and unveils information on biological surfaces.

Polarization vision in terrestrial hermit crabs

Polarization vision is used by a wide range of animals for navigating, orienting, and detecting objects or areas of interest. Shallow marine and semi-terrestrial crustaceans are particularly well known for their abilities to detect predator-like or conspecific-like objects based on their polarization properties. On land, some terrestrial invertebrates use polarization vision for detecting suitable habitats, oviposition sites or conspecifics, but examples of threat detection in the polarization domain are less well known. To test whether this also applies to crustaceans that have evolved to occupy terrestrial habitats, we determined the sensitivity of two species of land and one species of marine hermit crab to predator-like visual stimuli varying in the degree of polarization. All three species showed an ability to detect these cues based on polarization contrasts alone. One terrestrial species, Coenobita rugosus, showed an increased sensitivity to objects with a higher degree of polarization than the background. This is the inverse of most animals studied to date, suggesting that the ecological drivers for polarization vision may be different in the terrestrial environment.

The neural basis of visual processing and behavior in cephalopods

Coleoid cephalopods (octopuses, squids and cuttlefishes) are the only branch of the animal kingdom outside of vertebrates to have evolved both a large brain and camera-type eyes. They are highly dependent on vision, with the majority of their brain devoted to visual processing. Their excellent vision supports a range of advanced visually guided behaviors, from navigation and prey capture, to the ability to camouflage based on their surroundings. However, their brain organization is radically different from that of vertebrates, as well as other invertebrates, providing a unique opportunity to explore how a novel neural architecture for vision is organized and functions. Relatively few studies have examined the cephalopod visual system using current neuroscience approaches, to the extent that there has not even been a measurement of single-cell receptive fields in their central visual system. Therefore, there remains a tremendous amount that is unknown about the neural basis of vision in these extraordinary animals. Here, we review the existing knowledge of the organization and function of the cephalopod visual system to provide a framework for examining the neural circuits and computational mechanisms mediating their remarkable visual capabilities.

Circularly polarized chemiluminescence from planar chiral bis(adamantylidene-1,2-dioxetane)s

Bis(adamantylidene-1,2-dioxetane), upon conjugation to a planar chiral scaffold of [2.2]paracyclophane, gave chemical-triggerable circularly polarized chemiluminescence with a dissymmetry factor of 1.1 × 10-3 scale, to which exciton chirality upon chemiexcitation was assigned as the origin.

Measurements of large optical rotary dispersion in the adipose eyelid of Atlantic mackerel (Scomber scombrus)

Collagen is the most prevalent of Nature's structural proteins, and is found in the extracellular matrices of animals. The structures of collagen molecules and aggregates are chiral, which leads to the rotation of transmitted, plane-polarized light. Here, it is shown that the concentrations of chiral molecules and aggregates in the optically transparent, adipose eyelid of Atlantic mackerel (Scomber scombrus) can be so high, that plane-polarized light in the visible spectrum is rotated by tens to hundreds of degrees, depending on wavelength (the optical rotatory dispersion (ORD)). This gives rise to intensely coloured images of eyelid samples when illuminated with white light and viewed between crossed polarizers. The ORD in the visible spectrum is measured with monochromatic light sources, and using this dispersion, the variation of optical thickness within a sample (proportional to collagen concentration and path length) is determined. The agreement between observed and simulated white-light images is almost perfect. While collagen provides vital mechanical rigidity to animal tissue, it might also possess optical properties that are useful for vision and camouflage.

Tactics of evasion: strategies used by signallers to deter eavesdropping enemies from exploiting communication systems

Eavesdropping predators, parasites and parasitoids exploit signals emitted by their prey and hosts for detection, assessment, localization and attack, and in the process impose strong selective pressures on the communication systems of the organisms they exploit. Signallers have evolved numerous anti-eavesdropper strategies to mitigate the trade-off between the costs imposed from signal exploitation and the need for conspecific communication. Eavesdropper strategies fall along a continuum from opportunistic to highly specialized, and the tightness of the eavesdropper-signaller relationship results in differential pressures on communication systems. A wide variety of anti-eavesdropper strategies mitigate the trade-off between eavesdropper exploitation and conspecific communication. Antagonistic selection from eavesdroppers can result in diverse outcomes including modulation of signalling displays, signal structure, and evolutionary loss or gain of a signal from a population. These strategies often result in reduced signal conspicuousness and in decreased signal ornamentation. Eavesdropping enemies, however, can also promote signal ornamentation. While less common, this alternative outcome offers a unique opportunity to dissect the factors that may lead to different evolutionary pathways. In addition, contrary to traditional assumptions, no sensory modality is completely 'safe' as eavesdroppers are ubiquitous and have a broad array of sensory filters that allow opportunity for signal exploitation. We discuss how anthropogenic change affects interactions between eavesdropping enemies and their victims as it rapidly modifies signalling environments and community composition. Drawing on diverse research from a range of taxa and sensory modalities, we synthesize current knowledge on anti-eavesdropper strategies, discuss challenges in this field and highlight fruitful new directions for future research. Ultimately, this review offers a conceptual framework to understand the diverse strategies used by signallers to communicate under the pressure imposed by their eavesdropping enemies.

Insect-inspired nanofibrous polyaniline multi-scale films for hybrid polarimetric imaging with scattered light

We demonstrate a bio-inspired coating for novel imaging and sensing designs: the coating sorts different colors and linear polarizations. This coating, composed of conducting, nanofibrous polyaniline in an inverse opal film (PANI-IOF), is inexpensive and can feasibly be deposited over large areas on a range of flexible and non-flat substrates. With PANI IOFs, light is scattered into azimuthally polarized Debye rings. Subsequently, the diffracted speckle patterns carry compressed representations of the polarized illumination, which we reconstruct using shallow neural networks.

Polarization vision in invertebrates: beyond the boundaries of navigation

Invertebrates possess the unique ability to see polarized light. This allows them to exploit the rich polarization information embedded in their natural environments: patterns in plants, high contrast on water surfaces, distinctive signatures of conspecifics, and the celestial polarization pattern around the sun. From this wide repertoire of polarization signals, studies have primarily focused on understanding how celestial polarization information is converted into an internal compass. This review highlights several studies which suggest that spatio-temporal polarization information is utilized by insects for additional functions, such as signaling, detection, contrast enhancement, and host assessment. It concludes by evaluating recent technological advances for uncovering the full repertoire of polarization-sensitivity in invertebrates.

In situ measurements of reef squid polarization patterns using two-dimensional polarization data mapped onto three-dimensional tessellated surfaces

Reef squids belong to a group reputed for polarization sensitivity, yet polarization patterns of reef squid have not been quantified in situ. To quantify polarization patterns from video polarimetric data, we developed a protocol to map two-dimensional polarization data onto squid-shaped three-dimensional tessellated surfaces. This protocol provided a robust data container used to investigate three-dimensional regions-of-interest, producing data lineouts derived from the squid's geometry. This protocol also extracted polarimeter and squid body orientations and the solar heading from polarization images. When averaged over the solar heading, the ventral midline gave a low degree of polarization (2.4 ± 5.3%), and the area between the ventral and flank midlines had higher values (9.0 ± 5.3%). These averaged data had a large discontinuity in the angle of polarization (AoP) at the mantle's ventral midline (64 ± 55°), with larger discontinuities measured on individual squid. Ray-tracing calculations demonstrated that the AoP pattern was not related to the squid's surface-normal geometry. However, the AoP followed virtual striation axes on the squid's surface oriented 24° to the squid's long axis, similar in angle (27°) to the striations of birefringent collagen fibres documented in other squid species' skin.

Swallowtail Butterflies Use Multiple Visual Cues to Select Oviposition Sites

Simple Summary

Butterflies must not only identify host plants on which to lay their eggs—which they achieve using chemical cues—but also select suitable leaves on that plant that will support the growth of their larval offspring. Here, we asked whether swallowtail butterflies lay eggs on particular leaves of a Citrus tree and, if so, which cues they use to select the leaves. We first observed that butterflies indeed select just a few leaves on which to lay eggs. These leaf preferences were observed across many individuals, implying that they were not idiosyncratic, and the butterflies descended directly towards the leaves from some distance, suggesting that they were using visual rather than chemical cues. We then investigated which visual cues are used by the butterflies, and found that the number of eggs laid upon a leaf was correlated with its height on the tree, flatness, green reflectance, brightness, and degree of polarization. These five features may be important both for selecting young leaves and those which are situated well for egg-laying. An outstanding question for future study is how visual and chemical cues interact in this context.

Abstract

Flower-foraging Japanese yellow swallowtail butterflies, Papilio xuthus, exhibit sophisticated visual abilities. When ovipositing, females presumably attempt to select suitable leaves to support the growth of their larval offspring. We first established that butterflies indeed select particular leaves on which to lay eggs; when presented with a single Citrus tree, butterflies significantly favored two out of 102 leaves for oviposition. These preferences were observed across many individuals, implying that they were not merely idiosyncratic, but rather based on properties of the leaves in question. Because the butterflies descended towards the leaves rather directly from a distance, we hypothesized that they base their selection on visual cues. We measured five morphological properties (height, orientation, flatness, roundness, and size) and four reflective features (green reflectance, brightness, and degree and angle of linear polarization). We found that the number of eggs laid upon a leaf was positively correlated with its height, flatness, green reflectance, and brightness, and negatively correlated with its degree of polarization, indicating that these features may serve as cues for leaf selection. Considering that other studies report ovipositing butterflies’ preference for green color and horizontally polarized light, butterflies likely use multiple visual features to select egg-laying sites on the host plant.

The wing scales of the mother-of-pearl butterfly, Protogoniomorpha parhassus, are thin film reflectors causing strong iridescence and polarization

The dorsal wings of the mother-of-pearl butterfly, Protogoniomorpha parhassus, display an angle-dependent pink, structural color. This effect is created by light interference in the lower lamina of the wing scales, which acts as an optical thin film. The scales feature extremely large windows that enhance the scale reflectance, because the upper lamina of ridges and cross-ribs is very sparse. Characteristic for thin film reflectors, the spectral shape of the reflected light strongly depends on the angle of light incidence, shifting from pink to yellow when changing the angles of illumination and observation from normal to skew, and also the degree of polarization strongly varies. The simultaneous spectral and polarization changes serve a possibly widespread, highly effective system among butterflies for intraspecific communication during flight.

Summary: The dorsal wings of the mother-of-pearl butterfly, Protogoniomorpha parhassus, show characteristics of thin film reflectors, allowing simultaneous spectral and polarization changes, which may be important in intraspecific communication.

Thresholds of polarization vision in octopuses

Polarization vision is widespread in nature, mainly among invertebrates, and is used for a range of tasks including navigation, habitat localization and communication. In marine environments, some species such as those from the Crustacea and Cephalopoda that are principally monochromatic, have evolved to use this adaptation to discriminate objects across the whole visual field, an ability similar to our own use of colour vision. The performance of these polarization vision systems varies, and the few cephalopod species tested so far have notably acute thresholds of discrimination. However, most studies to date have used artificial sources of polarized light that produce levels of polarization much higher than found in nature. In this study, the ability of octopuses to detect polarization contrasts varying in angle of polarization (AoP) was investigated over a range of different degrees of linear polarization (DoLP) to better judge their visual ability in more ecologically relevant conditions. The ‘just-noticeable-differences’ (JND) of AoP contrasts varied consistently with DoLP. These JND thresholds could be largely explained by their ‘polarization distance’, a neurophysical model that effectively calculates the level of activity in opposing horizontally and vertically oriented polarization channels in the cephalopod visual system. Imaging polarimetry from the animals’ natural environment was then used to illustrate the functional advantage that these polarization thresholds may confer in behaviourally relevant contexts.

Summary: Octopuses are highly sensitive to small changes in the angle of polarization (<1 deg contrast), even when the degree of polarization is low, which may confer a functional advantage in behaviourally relevant contexts.

Orientation behavior of riparian long-jawed orb weavers (Tetragnatha elongata) after displacement over water

Many organisms possess remarkable abilities to orient and navigate within their environment to achieve goals. We examined the orientation behavior of a riparian spider, the Long-Jawed Orb Weaver (Tetragnatha elongata), when displaced onto the surface of the water. When displaced, spiders move with alternating movements of the first three leg pairs while dragging the most posterior pair of legs behind them. In addition, spiders often perform a series of orientation behaviors consisting of concentric circles before ultimately choosing a path of travel directly toward the nearest point to land. While the number of orientation behaviors increased with increasing distance from shore, distance from shore had no effect on the direction of travel, which was significantly oriented toward the closest shoreline. These results indicate a complex ability to orient toward land when displaced onto water, possibly to decrease the amount of time on the surface of the water and thus decrease predation risk.

Stark trade-offs and elegant solutions in arthropod visual systems

Vision is one of the most important senses for humans and animals alike. Diverse elegant specializations have evolved among insects and other arthropods in response to specific visual challenges and ecological needs. These specializations are the subject of this Review, and they are best understood in light of the physical limitations of vision. For example, to achieve high spatial resolution, fine sampling in different directions is necessary, as demonstrated by the well-studied large eyes of dragonflies. However, it has recently been shown that a comparatively tiny robber fly (Holcocephala) has similarly high visual resolution in the frontal visual field, despite their eyes being a fraction of the size of those of dragonflies. Other visual specializations in arthropods include the ability to discern colors, which relies on parallel inputs that are tuned to spectral content. Color vision is important for detection of objects such as mates, flowers and oviposition sites, and is particularly well developed in butterflies, stomatopods and jumping spiders. Analogous to color vision, the visual systems of many arthropods are specialized for the detection of polarized light, which in addition to communication with conspecifics, can be used for orientation and navigation. For vision in low light, optical superposition compound eyes perform particularly well. Other modifications to maximize photon capture involve large lenses, stout photoreceptors and, as has been suggested for nocturnal bees, the neural pooling of information. Extreme adaptations even allow insects to see colors at very low light levels or to navigate using the Milky Way.

The Clinical Application of Polarization Pattern Perception

Purpose

Determine the repeatability of and optimum stimulus parameters for testing polarization pattern perception in a real-world clinical population, and assess the ability of polarization perception to distinguish normal from abnormal eyes.

Methods

Polarization perception was evaluated in staff and patients attending ophthalmology clinics at Warwick Hospital, UK. A series of visual stimuli were presented in pseudorandom order using a liquid-crystal-display-based polarization pattern generator. Stimuli included geometric patterns, gratings, checkerboards, and optotypes. Participants had one or both eyes diagnosed as normal or abnormal following ophthalmic examination, optical coherence tomography, and measures of visual acuity. Measurement scores were assigned to the eye(s) of each participant depending on the total number of stimuli perceived or identified.

Results

Stimuli covered the range of spatial scales resolvable within polarization perception by normal and abnormal eyes. Different stimuli had different saliencies. For each stimulus type, polarization perception in the abnormal group was significantly reduced compared with normal eyes (P < 0.001). Relative stimulus salience was broadly similar for normal-eye and abnormal-eye viewing groups, being greatest for radially symmetric patterns and least for optotypes. Checkerboard pattern salience had an inverse logarithmic relationship with check fundamental spatial frequency. A devised metric covering the dynamic range of polarization perception was repeatable, and the score derived from the metric was reduced in the abnormal group compared with the normal group (P < 0.001).

Conclusions

Clinically useful metrics of polarization perception distinguish between normal and abnormal eyes.

Translational Relevance

Perception of spatial patterns formed of non-uniform polarization fields has potential as a quantitative clinical diagnostic measurement.

Dynamic Courtship Signals and Mate Preferences in Sepia plangon

Communication in cuttlefish includes rapid changes in skin coloration and texture, body posture and movements, and potentially polarized signals. The dynamic displays are fundamental for mate choice and agonistic behavior. We analyzed the reproductive behavior of the mourning cuttlefish Sepia plangon in the laboratory. Mate preference was analyzed via choice assays (n = 33) under three sex ratios, 1 male (M): 1 female (F), 2M:1F, and 1M:2F. We evaluated the effect of modifying polarized light from the arms stripes and ambient light with polarized and unpolarized barriers between the cuttlefish. Additionally, to assess whether a particular trait was a determinant for mating, we used 3D printed cuttlefish dummies. The dummies had different sets of visual signals: two sizes (60 or 90 mm mantle length), raised or dropped arms, high or low contrast body coloration, and polarized or unpolarized filters to simulate the arms stripes. Frequency and duration (s) of courtship displays, mating, and agonistic behaviors were analyzed with GLM and ANOVAs. The behaviors, body patterns, and their components were integrated into an ethogram to describe the reproductive behavior of S. plangon. We identified 18 body patterns, 57 body patterns components, and three reproductive behaviors (mating, courtship, and mate guarding). Only sex ratio had a significant effect on courtship frequency, and the male courtship success rate was 80%. Five small (ML < 80 mm) males showed the dual-lateral display to access mates while avoiding fights with large males; this behavior is characteristic of male "sneaker" cuttlefish. Winner males showed up to 17 body patterns and 33 components, whereas loser males only showed 12 patterns and 24 components. We identified 32 combinations of body patterns and components that tended to occur in a specific order and were relevant for mating success in males. Cuttlefish were visually aware of the 3D-printed dummies; however, they did not start mating or agonistic behavior toward the dummies. Our findings suggest that in S. plangon, the dynamic courtship displays with specific sequences of visual signals, and the sex ratio are critical for mate choice and mating success.