Near-infrared spectroscopy of H3O+⋯Xn (X = Ar, N2, and CO, n = 1-3)

Near-infrared (NIR) spectra of H3O+⋯Xn (X = Ar, N2, and CO, n = 1-3) in the first overtone region of OH-stretching vibrations (4800-7000 cm-1) were measured. Not only OH-stretching overtones but also several combination bands are major features in this region, and assignments of these observed bands are not obvious at a glance. High-precision anharmonic vibrational simulations based on the discrete variable representation approach were performed. The simulated spectra show good agreement with the observed ones and provide firm assignments of the observed bands, except in the case of X = CO, in which higher order vibrational mode couplings seem significant. This agreement demonstrates that the present system can be a benchmark for high precision anharmonic vibrational computations of NIR spectra. Band broadening in the observed spectra becomes remarkable with an increase of the interaction with the solvent molecule (X). The origin of the band broadening is explored by rare gas tagging experiments and anharmonic vibrational simulations of hot bands.

ATR-far-ultraviolet spectroscopy: a challenge to new σ chemistry

This review reports the recent progress on ATR-far ultraviolet (FUV) spectroscopy in the condensed phase. ATR-FUV spectroscopy for liquids and solids enables one to explore various topics in physical chemistry, analytical chemistry, nanoscience and technology, materials science, electrochemistry, and organic chemistry. In this review, we put particular emphasis on the three major topics: (1) studies on electronic transitions and structures of various molecules, which one cannot investigate via ordinary UV spectroscopy. The combined use of ATR-FUV spectroscopy and quantum chemical calculations allows for the investigation of various electronic transitions, including σ, n-Rydberg transitions. ATR-FUV spectroscopy may open a new avenue for σ-chemistry. (2) ATR-FUV spectroscopy enables one to measure the first electronic transition of water at approximately 160 nm without peak saturation. Using this band, one can study the electronic structure of water, aqueous solutions, and adsorbed water. (3) ATR-FUV spectroscopy has its own advantages of the ATR method as a surface analysis method. ATR-FUV spectroscopy is a powerful technique for exploring a variety of top surface phenomena (∼50 nm) in adsorbed water, polymers, graphene, organic materials, ionic liquids, and so on. This review briefly describes the principles, characteristics, and instrumentation of ATR-FUV spectroscopy. Next, a detailed description about quantum chemical calculation methods for FUV and UV regions is given. The recent application of ATR-FUV-UV spectroscopy studies on electronic transitions from σ orbitals in various saturated molecules is introduced first, followed by a discussion on the applications of ATR-FUV spectroscopy to studies on water, aqueous solutions, and adsorbed water. Applications of ATR-FUV spectroscopy in the analysis of other materials such as polymers, ionic liquids, inorganic semiconductors, graphene, and carbon nanocomposites are elucidated. In addition, ATR-FUV-UV-vis spectroscopy focusing on electrochemical interfaces is outlined. Finally, FUV-UV-surface plasmon resonance studies are discussed.

A hybrid variable selection method combining Fisher's linear discriminant combined population analysis and an improved binary cuckoo search algorithm

In this paper, a novel hybrid variable selection method for model building by near-infrared (NIR) spectroscopy is proposed for composition measurement in industrial processes. A double-layer structure is designed for variable selection by combining Fisher's linear discriminant combined population analysis (FCPA) and an improved binary cuckoo search algorithm (IBCS). The Fisher classifier combined with model population analysis is used to select the variable interval wherein the useful variables are roughly located even when strong multicollinearity exists among spectral variables. Opposition-based learning (OBL) and jumping genes (JG) are introduced to improve the binary cuckoo search algorithm for the fine selection of key variables, thus avoiding the loss of excellent solutions due to randomness and the local optimum. Different variable selection methods were used to select variables for beer, corn, and diesel fuel datasets, and the partial least squares (PLS) algorithms were used to build calibration models to predict the original extract concentration of beer, the protein and starch content of corn, and the boiling point of diesel fuel, respectively. The results showed that the proposed PLS modeling method based on FCPA-IBCS has higher fitting accuracy and smaller prediction errors.

Continuing progress in the field of two-dimensional correlation spectroscopy (2D-COS), part II. Recent noteworthy developments

This comprehensive survey review compiles noteworthy developments and new concepts of two-dimensional correlation spectroscopy (2D-COS) for the last two years. It covers review articles, books, proceedings, and numerous research papers published on 2D-COS, as well as patent and publication trends. 2D-COS continues to evolve and grow with new significant developments and versatile applications in diverse scientific fields. The healthy, vigorous, and diverse progress of 2D-COS studies in many fields strongly confirms that it is well accepted as a powerful analytical technique to provide an in-depth understanding of systems of interest.

A Study of C=O…HO and OH…OH (Dimer, Trimer, and Oligomer) Hydrogen Bonding in a Poly(4-vinylphenol) 30%/Poly(methyl methacrylate) 70% Blend and its Thermal Behavior Using Near-Infrared Spectroscopy and Infrared Spectroscopy

Inter- and intramolecular hydrogen bonding and their temperature-dependent changes in a poly(4-vinylphenol)/poly(methyl methacrylate)(PVPh 30%/PMMA 70%) blend were investigated using near-infrared (NIR) and infrared (IR) spectroscopy. Band assignments of the fundamentals and first overtones of the OH stretching mode of a free OH group and OH groups in C=O···HO and OH···OH (dimer, trimer, and oligomer) hydrogen bonding of PVPh 30%/PMMA 70% were carried out by comparison between its NIR and IR spectra and comparison with NIR and IR spectra of phenol. The comparison of the NIR spectra of the PVPh 30%/PMMA 70% blend (hereafter, we denote it as PVPh30%) with the corresponding IR spectra reveals that to observe bands arising from the free OH and OH···OH dimer, which is a weaker hydrogen bonding, NIR is better while to investigate bands originating from OH groups in the OH···O=C and OH···OH (oligomer) hydrogen bonds, which are stronger hydrogen bonding, IR is better. Thus, a combination of IR and NIR spectroscopy has provided convincing results for the hydrogen bonding of PVPh30%. The relative intensity of the two bands at 7058 and 6921 cm^-1 (I₇₀₅₈/I₆₉₂₁) due to the first overtones of the OH stretching modes of the free OH group and the OH group in the dimer, respectively, increases significantly above 90 °C, which is close to Tg of PVPh. In concomitance with the intensity increase in the relative intensity of the free OH band, the intensity of a band at 1706 cm^-1 due to the C=O stretching mode of the C=O···HO hydrogen bond of PVPh30% decreases above 90°C. These results suggest that above the Tg of PVPh the C=O···HO hydrogen bond is broken gradually and that the free OH increases. Of note is that below Tg the intensities of NIR bands due to the OH first overtones of free OH group and OH groups in the OH···OH dimer gain intensity in parallel with temperature increase, and above Tg the intensity of the band derived from the OH···OH group increases linearly much slower than that of the band due to the free OH. Moreover, a band due to an OH···OH oligomer decreases linearly. Hence, it is very likely that the OH···OH oligomers dissociate into free OH groups. Anharmonicity of O-H bonds, which is sensitive to a hydrogen bond, was estimated for the free OH and OH bonds in the C=O···HO and OH···OH (dimer, trimer, and oligomer) hydrogen bonding by comparison between the NIR and IR spectra in the OH stretching band regions.

Attenuated Total Reflection Far-Ultraviolet (ATR-FUV) Spectroscopy is a Sensitive Tool for Investigation of Protein Adsorption

Attenuated total reflection far-ultraviolet (ATR-FUV) spectra in the 145-250 nm region were studied for four kinds of proteins (two α-helix-rich proteins: bovine serum albumin (BSA) and lysozyme and two β-sheet rich proteins: concanavalin A and γ-globulin) in different solutions (pure water and phosphate buffered saline, or PBS) with different concentrations. All the spectra show a band at 191 nm due to the π-π^* transition of amide bonds of the proteins. The wavelength of the band does not change with their second structures, suggesting that the corresponding electronic transition mode is localized and polarized in the direction that is not affected by the difference in the peptide folding. The intensity of the 191 nm band differs with the concentration of salt in the solution, suggesting that the band intensity reflects the adsorption density of a protein on the internal reflection element (IRE) made of a sapphire glass prism. According to the intensity changes of the band at 191 nm, it is revealed that the properties in adsorption are different from one protein to another. It is assumed that there are two types of forces on the protein adsorption: one is that among the molecules and the other is that between a molecule and a substrate. The origin of force includes localized electrostatic polarity and affinity to water. The ions in the solvent give a marked effect on these forces, resulting in the difference in the response to adsorption density against the salt concentration in the solvent.

In Situ Raman Observation of Oxygen Activation and Reaction at Platinum-Ceria Interfaces during CO Oxidation

Understanding the fundamental insights of oxygen activation and reaction at metal-oxide interfaces is of significant importance yet remains a major challenge due to the difficulty in in situ characterization of active oxygen species. Herein, the activation and reaction of molecular oxygen during CO oxidation at platinum-ceria interfaces has been in situ explored using surface-enhanced Raman spectroscopy (SERS) via a borrowing strategy, and different active oxygen species and their evolution during CO oxidation at platinum-ceria interfaces have been directly observed. In situ Raman spectroscopic evidence with isotopic exchange experiments demonstrate that oxygen is efficiently dissociated to chemisorbed O on Pt and lattice Ce-O species simultaneously at interfacial Ce³⁺ defect sites under CO oxidation, leading to a much higher activity at platinum-ceria interfaces compared to that at Pt alone. Further in situ time-resolved SERS studies and density functional theory simulations reveal a more efficient molecular pathway through the reaction between adsorbed CO and chemisorbed Pt-O species transferred from the interfaces. This work deepens the fundamental understandings on oxygen activation and CO oxidation at metal-oxide interfaces and offers a sensitive technique for the in situ characterization of oxygen species under working conditions.

Far-Ultraviolet Spectroscopy and Quantum Chemical Calculation Studies of the Conformational Dependence on the Electronic Structure and Transitions of Cyclohexane, Methyl and Dimethyl Cyclohexane, and Decalin; Effects of Axial Substitutions on the Electronic Transitions

Far-ultraviolet (FUV) spectra were measured for cyclohexane, methyl cyclohexane, six isomers of dimethyl cyclohexane, and cis- and trans-decalin. Attenuated total reflection-FUV (ATR-FUV) spectroscopy, which we originally proposed, provides systematic information about the excitation states of saturated organic molecules and the hyperconjugation of σ bonds. The FUV spectra of cyclohexane and methyl cyclohexane in neat liquids showed a band with central wavelengths near 155 and 162 nm. The simulation spectrum of cyclohexane calculated by time-dependent density-functional theory (TD-DFT) (CAM-B3LYP/aug-cc-pVTZ) gives two bands at 146 and 152 nm owing to the transition from HOMO-2 to Rydberg 3pz (Tb) and those from HOMO and HOMO-1 to Rydberg 3px/3py (Ta), respectively. The simulation spectrum of methyl cyclohexane with the equatorial substituent has peaks at approximately the same positions as cyclohexane. The calculated molar absorption coefficient is larger than that of cyclohexane, estimating the observed FUV spectra very well. The FUV spectra of dimethyl cyclohexane with two methyl substituents at the equatorial positions (trans-1,2-, cis-1,3-, and trans-1,4-) and trans-decalin had similar features to those of cyclohexane and methylcyclohexane. The TD-DFT calculations revealed that the shoulders at the shorter- and longer-wavelength sides of the band center of dimethyl cyclohexane (with methyl substituents at equatorial positions) and trans-decalin are assigned to Tb and Ta, respectively. In the case of dimethyl cyclohexane with one methyl substituent in the axial position (cis-1,2-, trans-1,3-, and cis-1,4-) and cis-decalin, the band caused by Tb decreased compared to those of the other compounds. The decrease in intensity and the longer-wavelength shift of the Tb band for dimethyl cyclohexane (with one methyl group at the axial position) and cis-decalin revealed that the band on the longer-wavelength side was assigned to the overlap band of Ta and Tb. The reason for such a large spectral alternation for the axial substitution may be the increase in the orbital energy of HOMO-2, which has its electron density concentrated at the axial C-H bond. Regarding the effect of the hyperconjugation of C-C and C-H σ orbitals, the second perturbation energies of the interaction between C_α-H_ax and C_β-H_ax were estimated for molecules by natural bond orbital (NBO) analysis. There is a correlation between the orbital energies of HOMO-2 and the changes in vicinal interaction by axial substitution.

Advances, challenges and perspectives of quantum chemical approaches in molecular spectroscopy of the condensed phase

The purpose of this review is to demonstrate advances, challenges and perspectives of quantum chemical approaches in molecular spectroscopy of the condensed phase. Molecular spectroscopy, particularly vibrational spectroscopy and electronic spectroscopy, has been used extensively for a wide range of areas of chemical sciences and materials science as well as nano- and biosciences because it provides valuable information about structure, functions, and reactions of molecules. In the meantime, quantum chemical approaches play crucial roles in the spectral analysis. They also yield important knowledge about molecular and electronic structures as well as electronic transitions. The combination of spectroscopic approaches and quantum chemical calculations is a powerful tool for science, in general. Thus, our article, which treats various spectroscopy and quantum chemical approaches, should have strong implications in the wider scientific community. This review covers a wide area of molecular spectroscopy from far-ultraviolet (FUV, 120-200 nm) to far-infrared (FIR, 400-10 cm-1)/terahertz and Raman spectroscopy. As quantum chemical approaches, we introduce several anharmonic approaches such as vibrational self-consistent field (VSCF) and the combination of periodic harmonic calculations with anharmonic corrections based on finite models, grid-based techniques like the Numerov approach, the Cartesian coordinate tensor transfer (CCT) method, Symmetry-Adapted Cluster Configuration-Interaction (SAC-CI), and the ZINDO (Semi-empirical calculations at Zerner's Intermediate Neglect of Differential Overlap). One can use anharmonic approaches and grid-based approaches for both infrared (IR) and near-infrared (NIR) spectroscopy, while CCT methods are employed for Raman, Raman optical activity (ROA), FIR/terahertz and low-frequency Raman spectroscopy. Therefore, this review overviews cross relations between molecular spectroscopy and quantum chemical approaches, and provides various kinds of close-reality advanced spectral simulation for condensed phases.

Optical Performance of Two Dimensional Electron Gas and GaN:C Buffer Layers in AlGaN/AlN/GaN Heterostructures on SiC Substrate

Terahertz time-domain spectroscopy and Fourier-transform infrared spectroscopy were developed as the method for the investigation of high-frequency characteristics of two-dimensional electron gas and GaN:C buffer layers in AlGaN/AlN/GaN heterostructures grown on a semi-insulating SiC substrate. The reflectance and transmittance spectra of the selected heterostructure layers were studied after the top layers were removed by a reactive ion etching. Results were numerically analyzed using the transfer matrix method taking into account the high-frequency electron conductivity via a Drude model and complex dielectric permittivity of each epitaxial layer via a one-phonon-resonance approximation. Good agreement between the experiment and theory was achieved revealing the temperature dependent electron effective mass in AlGaN/AlN/GaN high electron mobility transistor structures and the small damping factors of optical phonons due to high crystal quality of the epitaxial layers fabricated on the SiC substrate.

ATR-far-ultraviolet spectroscopy in the condensed phase-The present status and future perspectives

Far-ultraviolet (FUV) spectroscopy in the region of 140-200 nm of condensed-phase has received keen interest as a new electronic spectroscopy. The introduction of the attenuated total reflection (ATR) technique to the FUV region has opened a new avenue for FUV spectroscopy of liquids and solids. ATR-FUV spectroscopy enables the study of electronic structures and transitions of most types of molecules. It also holds great promise for a variety of applications, i.e., from the application to basic sciences to practical applications. In this review, the characteristics and advantages of ATR-FUV spectroscopy in the condensed phase are described first; then, a brief historical overview is provided. Next, the ATR-FUV spectroscopy instrumentation is outlined. After these introductory parts, a variety of AFT-FUV spectroscopy applications are introduced, starting from applications to investigations of electronic structure and transitions of alkanes, graphenes, and polymers. Then, time-resolved ATR-FUV spectroscopy is discussed. The applications to materials research, such as the research on inorganic semiconductors and ionic liquids, follow. In the last part, the FUV spectroscopy perspective is emphasized.

2D Nanomaterial-Based Surface Plasmon Resonance Sensors for Biosensing Applications

The absorption and binding energy of material plays an important role with a large surface area and conductivity for the development of any sensing device. The newly grown 2D nanomaterials like black phosphorus transition metal dichalcogenides (TMDCs) or graphene have excellent properties for sensing devices' fabrication. This paper summarizes the progress in the area of the 2D nanomaterial-based surface plasmon resonance (SPR) sensor during last decade. The paper also focuses on the structure of Kretschmann configuration, the sensing principle of SPR, its characteristic parameters, application in various fields, and some important recent works related to SPR sensors have also been discussed, based on the present and future scope of this field. The present paper provides a platform for researchers to work in the field of 2D nanomaterial-based SPR sensors.

Assessment of Embryonic Bioactivity through Changes in the Water Structure Using Near-Infrared Spectroscopy and Imaging

We explored the influence of embryonic bioactivity on the water structure using near-infrared (NIR) spectroscopy and imaging. Four groups of Japanese medaka fish (Oryzias latipes) eggs were studied: (a) one group of eggs was activated by fertilization, and (b-d) three groups of eggs were not activated because embryogenesis was stopped or not started by (b) culturing under cold temperature, (c) instant freezing, or (d) lack of fertilization. The yolks of the activated eggs contained higher proportions of weakly hydrogen bonded water than those of nonactivated eggs. A possible factor responsible for the significant changes in the water structure was revealed to be a protein secondary structural change from an α-helix to a β-sheet in the activated eggs. NIR images of the activated eggs successfully visualized the water structural variation in the yolk with a higher proportion of weak hydrogen bonds due to the activation of embryonic development. The embryogenic activity could be assessed through the water hydrogen bond network, which is affected by newly generated proteins with different secondary structures.

Nanoarchitectonics of Nanoporous Carbon Materials in Supercapacitors Applications

High surface area and large pore volume carbon materials having hierarchical nanoporous structure are required in high performance supercapacitors. Such nanoporous carbon materials can be fabricated from organic precursors with high carbon content, such as synthetic biomass or agricultural wastes containing cellulose, hemicellulose, and lignin. Using recently developed unique concept of materials nanoarchitectonics, high performance porous carbons with controllable surface area, pore size distribution, and hierarchy in nanoporous structure can be fabricated. In this review, we will overview the recent trends and advancements on the synthetic methods for the production of hierarchical porous carbons with one- to three-dimensional network structure with superior performance in supercapacitors applications. We highlight the promising scope of accessing nanoporous graphitic carbon materials from: (i) direct conversion of single crystalline self-assembled fullerene nanomaterials and metal organic frameworks, (ii) hard- and soft-templating routes, and (iii) the direct carbonization and/or activation of biomass or agricultural wastes as non-templating routes. We discuss the appealing points of the different synthetic carbon sources and natural precursor raw-materials derived nanoporous carbon materials in supercapacitors applications.

Solvation effects on wavenumbers and absorption intensities of the OH-stretch vibration in phenolic compounds – electrical- and mechanical anharmonicity via a combined DFT/Numerov approach

A previously measured oscillatory intensity pattern in phenolic compounds between different solvents was successfully reproduced for the first time, employing modern grid-based methods to solve the time-independent vibrational Schrödinger equation.