1
|
Inuki S. [Elucidation of Biological Mechanisms Using Synthetic Natural Products and Their Derivatives]. YAKUGAKU ZASSHI 2020; 140:455-470. [PMID: 32238625 DOI: 10.1248/yakushi.19-00206] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Natural products are useful sources in the search for biochemical probes and drug leads because of their unique biological activities. However, synthetic studies or functional analyses of polycyclic complex natural products or conjugated lipids (e.g., glycolipids) are often hampered because of their synthesis and handling are challenging. On the basis of rational designs, synthetic studies, and chemical modifications, natural products need to be optimized to more potent compounds with improved activities, selectivities and/or physical properties. We have been synthesizing natural products and their derivatives for the elucidation of their biological mechanisms and discovery of drug leads. This review describes three topics for developing functional compounds derived from natural products for prospective involvement in pharmaceutical research: 1) direct construction of the ergot alkaloid scaffold by palladium catalyzed domino cyclization of amino allenes; 2) identification of novel sphingosine kinase inhibitors through a structure-activity relationship study of jaspine B; and 3) design, synthesis and biological evaluation of novel CD1d glycolipid ligands containing modified lipid moieties.
Collapse
Affiliation(s)
- Shinsuke Inuki
- Graduate School of Pharmaceutical Sciences, Kyoto University
| |
Collapse
|
2
|
Nemoto T. Synthesis of 3,4‐Fused Tricyclic Indoles Using 3‐Alkylidene Indolines as Versatile Precursors. CHEM REC 2018; 19:320-332. [DOI: 10.1002/tcr.201800043] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Accepted: 06/06/2018] [Indexed: 12/31/2022]
Affiliation(s)
- Tetsuhiro Nemoto
- Graduate School of Pharmaceutical SciencesChiba University 1-8-1, Inohana, Chuo-ku Chiba 260-8675 Japan
- Molecular Chirality Research CenterChiba University 1-33, Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| |
Collapse
|
3
|
Nemoto T, Hamada Y. Synthesis of Spirocyclic or Fused Cyclic Compounds Using Transition Metal-Catalyzed Dearomatization of Phenols. J SYN ORG CHEM JPN 2015. [DOI: 10.5059/yukigoseikyokaishi.73.977] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
| | - Yasumasa Hamada
- Graduate School of Pharmaceutical Sciences, Chiba University
| |
Collapse
|
4
|
Wang N, Chen B, Ma S. A Practical Synthesis of Chiral Oxazolines through a Highly Diastereoselective Coupling-Cyclization Reaction ofN-(Buta-2,3-dienyl)amides and Aryl Iodides. ASIAN J ORG CHEM 2014. [DOI: 10.1002/ajoc.201400023] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
|
5
|
Affiliation(s)
- Hiroaki Ohno
- Graduate
School of Pharmaceutical
Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| |
Collapse
|
6
|
Wang Z, Ren J, Wang Z. Lewis Acids Promoted Formal Intramolecular [3 + 2] Parallel and Cross-Cycloadditions of Cyclopropane 1,1-Diesters with Allenes. Org Lett 2013; 15:5682-5. [DOI: 10.1021/ol402662j] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Zhenjun Wang
- State Key Laboratory and Institute of Elemento-Organic Chemistry, Synergetic Innovation Center of Chemical Science and Engineering (Tianjin), Nankai University, 94# Weijin Road, Tianjin 300071, P.R. China
| | - Jun Ren
- State Key Laboratory and Institute of Elemento-Organic Chemistry, Synergetic Innovation Center of Chemical Science and Engineering (Tianjin), Nankai University, 94# Weijin Road, Tianjin 300071, P.R. China
| | - Zhongwen Wang
- State Key Laboratory and Institute of Elemento-Organic Chemistry, Synergetic Innovation Center of Chemical Science and Engineering (Tianjin), Nankai University, 94# Weijin Road, Tianjin 300071, P.R. China
| |
Collapse
|
7
|
Lechel T, Pfrengle F, Reissig HU, Zimmer R. Three Carbons for Complexity! Recent Developments of Palladium-Catalyzed Reactions of Allenes. ChemCatChem 2013. [DOI: 10.1002/cctc.201200875] [Citation(s) in RCA: 112] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
|
8
|
Nemoto T, Zhao Z, Yokosaka T, Suzuki Y, Wu R, Hamada Y. Palladium-catalyzed intramolecular ipso-Friedel-Crafts alkylation of phenols and indoles: rearomatization-assisted oxidative addition. Angew Chem Int Ed Engl 2013; 52:2217-20. [PMID: 23322382 DOI: 10.1002/anie.201209317] [Citation(s) in RCA: 148] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2012] [Indexed: 11/12/2022]
Affiliation(s)
- Tetsuhiro Nemoto
- Graduate School of Pharmaceutical Sciences, Chiba University, 1-8-1, Inohana, Chuo-ku, Chiba 260-8675, Japan
| | | | | | | | | | | |
Collapse
|
9
|
Nemoto T, Zhao Z, Yokosaka T, Suzuki Y, Wu R, Hamada Y. Palladium-Catalyzed Intramolecularipso-Friedel-Crafts Alkylation of Phenols and Indoles: Rearomatization-Assisted Oxidative Addition. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201209317] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
10
|
Wang XC, Zhong MJ, Liang YM. One pot synthesis of indene through copper(i)-catalyzed three-components coupling and cyclization reaction. Org Biomol Chem 2012; 10:3636-41. [DOI: 10.1039/c2ob07071e] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
11
|
Inuki S, Iwata A, Oishi S, Fujii N, Ohno H. Enantioselective Total Synthesis of (+)-Lysergic Acid, (+)-Lysergol, and (+)-Isolysergol by Palladium-Catalyzed Domino Cyclization of Allenes Bearing Amino and Bromoindolyl Groups. J Org Chem 2011; 76:2072-83. [DOI: 10.1021/jo102388e] [Citation(s) in RCA: 84] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shinsuke Inuki
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Akira Iwata
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Shinya Oishi
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Nobutaka Fujii
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Hiroaki Ohno
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| |
Collapse
|
12
|
Rajeev R, Sunoj RB. Mechanism and electronic effects in nitrogen ylide-promoted asymmetric aziridination reaction. Org Biomol Chem 2011; 9:2123-32. [DOI: 10.1039/c0ob00955e] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
|
13
|
Belen’kii L, Gramenitskaya V, Evdokimenkova Y. The Literature of Heterocyclic Chemistry, Part X, 2005–2007. ADVANCES IN HETEROCYCLIC CHEMISTRY 2011. [DOI: 10.1016/b978-0-12-385464-3.00001-7] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
|
14
|
Inuki S, Yoshimitsu Y, Oishi S, Fujii N, Ohno H. Ring-construction/stereoselective functionalization cascade: total synthesis of pachastrissamine (jaspine B) through palladium-catalyzed bis-cyclization of propargyl chlorides and carbonates. J Org Chem 2010; 75:3831-42. [PMID: 20455522 DOI: 10.1021/jo100544v] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Palladium(0)-catalyzed cyclization of bromoallenes, propargyl chlorides, and carbonates bearing hydroxy and benzamide groups as internal nucleophiles stereoselectively provides functionalized tetrahydrofuran. Cyclization reactivity is dependent on the relative configuration of the benzamide and leaving groups, and on the nature of the leaving groups. This bis-cyclization was used as the key step in a short total synthesis of pachastrissamine, which is a biologically active marine natural product.
Collapse
Affiliation(s)
- Shinsuke Inuki
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | | | | | | | | |
Collapse
|
15
|
OHTA Y. Construction of Indole- and Isoquinoline-fused Nitrogen-containing Heterocycles through Copper-catalyzed Multi-component Reaction. YAKUGAKU ZASSHI 2010; 130:925-36. [DOI: 10.1248/yakushi.130.925] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Yusuke OHTA
- Graduate School of Pharmaceutical Sciences, Kyoto University
| |
Collapse
|
16
|
Casey CP, Boller TM, Samec JSM, Reinert-Nash JR. Quantitative Determination of the Regioselectivity of Nucleophilic Addition to η-Propargyl Rhenium Complexes and Direct Observation of an Equilibrium Between η-Propargyl Rhenium Complexes and Rhenacyclobutenes. Organometallics 2010; 28:123-131. [PMID: 20046997 DOI: 10.1021/om800739j] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
PMe(3) adds selectively to the central carbon of the η(3)- propargyl complex [C(5)Me(5)(CO)(2)Re(η(3)-CH(2)C≡CCMe(3))][BF(4)] (1-t-Bu) to form the metallacyclobutene [C(5)Me(5)(CO)(2)Re(CH(2)C(PMe(3))=CCMe(3))][BF(4)] (7). The rate of rearrangement of the metallacyclobutene 7 to η(2)-alkyne complex [C(5)Me(5)(CO)(2)Re(η(2)-Me(3)PCH(2)C≡CCMe(3))][BF(4)] (8) is is independent of phosphine concentration, consistent with a dissociative mechanism proceeding via η(3)-propargyl complex 1-t-Bu. The rate of this rearrangement is 480 times slower than the rate of exchange of PMe(3) with the labeled metallacyclobutene 7-d(9). This rate ratio provides an indirect measurement of the regioselectivity for addition of PMe(3) to the central carbon of η(3)-propargyl complex 1-t-Bu to give 7 compared to addition to a terminal carbon to give 8. The addition of PPh(3) to 1-t-Bu gives the metallacyclobutene [C(5)Me(5)(CO)(2)Re(CH(2)C(PPh(3))=CCMe(3))][BF(4)] (11). Low temperature (1)H NMR spectra provide evidence for an equilibrium between metallacyclobutene 11 and η(3)-propargyl complex 1-t-Bu (K(eq) ≈ 44 M(-1) at -46 °C and ΔG° (0 °C) = -1.2 ± 0.2 kcal mol(-1)).
Collapse
Affiliation(s)
- Charles P Casey
- Department of Chemistry, University of Wisconsin-Madison, Madison WI 53706
| | | | | | | |
Collapse
|
17
|
Ohta Y, Chiba H, Oishi S, Fujii N, Ohno H. Construction of Nitrogen Heterocycles Bearing an Aminomethyl Group by Copper-Catalyzed Domino Three-Component Coupling−Cyclization. J Org Chem 2009; 74:7052-8. [DOI: 10.1021/jo901328q] [Citation(s) in RCA: 100] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Yusuke Ohta
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Hiroaki Chiba
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Shinya Oishi
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Nobutaka Fujii
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Hiroaki Ohno
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| |
Collapse
|
18
|
|
19
|
Kammerer C, Prestat G, Madec D, Poli G. Phosphine-Free Palladium-Catalyzed Allene Carbopalladation/Allylic Alkylation Domino Sequence: A New Route to 4-(α-Styryl) γ-Lactams. Chemistry 2009; 15:4224-7. [DOI: 10.1002/chem.200900184] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
20
|
Inuki S, Oishi S, Fujii N, Ohno H. Total synthesis of (+/-)-lysergic acid, lysergol, and isolysergol by palladium-catalyzed domino cyclization of amino allenes bearing a bromoindolyl group. Org Lett 2008; 10:5239-42. [PMID: 18956869 DOI: 10.1021/ol8022648] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Ergot alkaloids and their synthetic analogs have been reported to exhibit broad biological activity. We investigated direct construction of the C/D ring system of ergot alkaloids based on palladium-catalyzed domino cyclization of amino allenes. With this biscyclization as the key step, total synthesis of (+/-)-lysergic acid, (+/-)-lysergol, and (+/-)-isolysergol was achieved.
Collapse
Affiliation(s)
- Shinsuke Inuki
- Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto, Japan
| | | | | | | |
Collapse
|
21
|
Trost BM, Xie J. Palladium-catalyzed diastereo- and enantioselective Wagner-Meerwein shift: control of absolute stereochemistry in the C-C bond migration event. J Am Chem Soc 2008; 130:6231-42. [PMID: 18429612 DOI: 10.1021/ja7111299] [Citation(s) in RCA: 94] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Inducing absolute stereochemistry in Wagner-Meerwein shifts was examined in a ring expansion protocol. Initiated by generation of a pi-allylpalladium intermediate by hydropalladation of allenes, the ring expansion of allenylcyclobutanol substrates proceeded with excellent diastereo- and enantioselectivities. The results demonstrate that, during the C-C bond migration process, our chiral catalysts can control the stereochemistry of both the pi-allylpalladium intermediate and the corresponding migration bond. Moreover, the stereochemical outcome of the reaction can be rationalized very well with the working model of the chiral catalyst. The method provides an efficient way to synthesize highly substituted cyclopentanones with an alpha-chiral O-tertiary center which has various synthetic applications.
Collapse
Affiliation(s)
- Barry M Trost
- Department of Chemistry, Stanford University, Stanford, California 94305, USA.
| | | |
Collapse
|
22
|
Ohno H, Aso A, Kadoh Y, Fujii N, Tanaka T. Heck-Type Cyclization of Oxime Ethers: Stereoselective Carbon–Carbon Bond Formation with Aryl Halides To Produce Heterocyclic Oximes. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200701868] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
23
|
Janardanan D, Sunoj RB. Computational investigations on the general reaction profile and diastereoselectivity in sulfur ylide promoted aziridination. Chemistry 2007; 13:4805-15. [PMID: 17487905 DOI: 10.1002/chem.200700303] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Mechanism and diastereoselectivity of sulfur ylide promoted aziridination reactions were studied by density functional theory with inclusion of solvent effects through the continuum solvation model. The general reaction pathway was modeled for the addition of substituted sulfur ylides (Me(2)S(+)CH(-)R) to an aldimine ((E)-methyl ethylidenecarbamate, MeHC=NCO(2)Me). The nature of the substituents on the ylidic carbon atom substantially affects the reaction profile. The stabilized (R=COMe) and semistabilized (R=Ph) ylides follow a cisoid addition mode leading to trans aziridines via anti betaine intermediates. The simplest model ylide (unstabilized, R=H) underwent cisoid addition in a similar fashion. In the case of stabilized ylides product diastereoselectivity is controlled by the barriers of the elimination step leading to the 2,3-trans aziridine, whereas it is decided in the addition step in the case of semistabilized ylides. The importance of steric and electronic factors in diastereoselective addition (2 and 5) and elimination (5) transition states was established. Comparison of results obtained with the gas-phase optimized geometries and with the fully optimized solvent-phase geometries reveals that the inclusion of solvent effects does not bring about any dramatic changes in the reaction profiles for all three kinds of ylides. In particular, diastereoselectivity for both kinds of ylides was found to be nearly the same in both these approaches.
Collapse
Affiliation(s)
- Deepa Janardanan
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | | |
Collapse
|
24
|
Ohno H, Aso A, Kadoh Y, Fujii N, Tanaka T. Heck-Type Cyclization of Oxime Ethers: Stereoselective Carbon-Carbon Bond Formation with Aryl Halides To Produce Heterocyclic Oximes. Angew Chem Int Ed Engl 2007; 46:6325-8. [PMID: 17640020 DOI: 10.1002/anie.200701868] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Hiroaki Ohno
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan.
| | | | | | | | | |
Collapse
|
25
|
Redon S, Berthe Berkaoui AL, Pannecoucke X, Outurquin F. Selenylated dienes: synthesis, stereochemical studies by 77Se NMR, and transformation into functionalized allenes. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.02.082] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
|
26
|
Ohno H, Ohta Y, Oishi S, Fujii N. Direct Synthesis of 2-(Aminomethyl)indoles through Copper(I)-Catalyzed Domino Three-Component Coupling and Cyclization Reactions. Angew Chem Int Ed Engl 2007; 46:2295-8. [PMID: 17300118 DOI: 10.1002/anie.200604342] [Citation(s) in RCA: 144] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Hiroaki Ohno
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan.
| | | | | | | |
Collapse
|
27
|
Ohno H, Ohta Y, Oishi S, Fujii N. Direct Synthesis of 2-(Aminomethyl)indoles through Copper(I)-Catalyzed Domino Three-Component Coupling and Cyclization Reactions. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200604342] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
|