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Forero DA, Glatt SJ, Oermann MH. Reviewing manuscripts for scientific journals: recommendations for early career scientists. BMC Res Notes 2025; 18:17. [PMID: 39819633 PMCID: PMC11740453 DOI: 10.1186/s13104-024-07060-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2024] [Accepted: 12/19/2024] [Indexed: 01/19/2025] Open
Abstract
Publication of articles in international scientific journals has been one of the main strategies for the communication of scientific findings and ideas. Prepublication peer review is a fundamental aspect of the publishing process in indexed scientific journals and, associated with the large growth in journals and articles, there has been a recent challenge in having adequate peer reviewers for international journals. In this article, we provide a short overview of the publishing process, give recommendations to early career researchers about writing peer reviews of adequate quality, and discuss some possibilities for the future.
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Affiliation(s)
- Diego A Forero
- School of Heath and Sport Sciences, Fundación Universitaria del Área Andina, Bogotá, Colombia.
| | - Stephen J Glatt
- Department of Psychiatry and Behavioral Sciences, SUNY Upstate Medical University, Syracuse, NY, United States of America
| | - Marilyn H Oermann
- Duke University School of Nursing, Durham, NC, United States of America
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2
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Moreau D, Wiebels K. Nine quick tips for open meta-analyses. PLoS Comput Biol 2024; 20:e1012252. [PMID: 39052540 PMCID: PMC11271959 DOI: 10.1371/journal.pcbi.1012252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/27/2024] Open
Abstract
Open science principles are revolutionizing the transparency, reproducibility, and accessibility of research. Meta-analysis has become a key technique for synthesizing data across studies in a principled way; however, its impact is contingent on adherence to open science practices. Here, we outline 9 quick tips for open meta-analyses, aimed at guiding researchers to maximize the reach and utility of their findings. We advocate for outlining preregistering clear protocols, opting for open tools and software, and the use of version control systems to ensure transparency and facilitate collaboration. We further emphasize the importance of reproducibility, for example, by sharing search syntax and analysis scripts, and discuss the benefits of planning for dynamic updating to enable living meta-analyses. We also recommend publication in open-access formats, as well as open data, open code, and open access publication. We close by encouraging active promotion of research findings to bridge the gap between complex syntheses and public discourse, and provide a detailed submission checklist to equip researchers, reviewers and journal editors with a structured approach to conducting and reporting open meta-analyses.
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Affiliation(s)
- David Moreau
- School of Psychology and Centre for Brain Research, University of Auckland, Auckland, New Zealand
| | - Kristina Wiebels
- School of Psychology and Centre for Brain Research, University of Auckland, Auckland, New Zealand
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3
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Hosseini M, Senabre Hidalgo E, Horbach SPJM, Güttinger S, Penders B. Messing with Merton: The intersection between open science practices and Mertonian values. Account Res 2024; 31:428-455. [PMID: 36303330 PMCID: PMC10163171 DOI: 10.1080/08989621.2022.2141625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
Abstract
Although adherence to Mertonian values of science (i.e., communism, universalism, organized skepticism, disinterestedness) is desired and promoted in academia, such adherence can cause friction with the normative structures and practices of Open Science. Mertonian values and Open Science practices aim to improve the conduct and communication of research and are promoted by institutional actors. However, Mertonian values remain mostly idealistic and contextualized in local and disciplinary cultures and Open Science practices rely heavily on third-party resources and technology that are not equally accessible to all parties. Furthermore, although still popular, Mertonian values were developed in a different institutional and political context. In this article, we argue that new normative structures for science need to look beyond nostalgia and consider aspirations and outcomes of Open Science practices. To contribute to such a vision, we explore the intersection of several Open Science practices with Mertonian values to flesh out challenges involved in upholding these values. We demonstrate that this intersection becomes complicated when the interests of numerous groups collide and contrast. Acknowledging and exploring such tensions informs our understanding of researchers' behavior and supports efforts that seek to improve researchers' interactions with other normative structures such as research ethics and integrity frameworks.
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Affiliation(s)
- Mohammad Hosseini
- Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA
| | | | - Serge P J M Horbach
- Danish Centre for Studies in Research and Research Policy, Aarhus University, Aarhus C, Denmark
| | - Stephan Güttinger
- Department of Sociology, Philosophy and Anthropology, University of Exeter, Exeter, UK
| | - Bart Penders
- Department of Health, Ethics & Society, Care and Public Health Research Institute (CAPHRI), Maastricht University, Maastricht, The Netherlands
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4
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Drozdz JA, Ladomery MR. The Peer Review Process: Past, Present, and Future. Br J Biomed Sci 2024; 81:12054. [PMID: 38952614 PMCID: PMC11215012 DOI: 10.3389/bjbs.2024.12054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Accepted: 05/29/2024] [Indexed: 07/03/2024]
Abstract
The peer review process is a fundamental aspect of modern scientific paper publishing, underpinning essential quality control. First conceptualised in the 1700s, it is an iterative process that aims to elevate scientific literature to the highest standards whilst preventing publication of scientifically unsound, potentially misleading, and even plagiarised information. It is widely accepted that the peer review of scientific papers is an irreplaceable and fundamental aspect of the research process. However, the rapid growth of research and technology has led to a huge increase in the number of publications. This has led to increased pressure on the peer review system. There are several established peer review methodologies, ranging from single and double blind to open and transparent review, but their implementation across journals and research fields varies greatly. Some journals are testing entirely novel approaches (such as collaborative reviews), whilst others are piloting changes to established methods. Given the unprecedented growth in publication numbers, and the ensuing burden on journals, editors, and reviewers, it is imperative to improve the quality and efficiency of the peer review process. Herein we evaluate the peer review process, from its historical origins to current practice and future directions.
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Affiliation(s)
| | - Michael R. Ladomery
- Department of Applied Sciences, University of the West of England, Bristol, United Kingdom
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5
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Kashif Al-Ghita M, Cobey K, Moher D, Leeflang MMG, Ebrahimzadeh S, Lam E, Rooprai P, Khalil AA, Islam N, Algodi H, Dawit H, Adamo R, Zeghal M, McInnes MDF. Cross-Sectional Evaluation of Open Science Practices at Imaging Journals: A Meta-Research Study. Can Assoc Radiol J 2024; 75:330-343. [PMID: 37997809 DOI: 10.1177/08465371231211290] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2023] Open
Abstract
Objective: To evaluate open science policies of imaging journals, and compliance to these policies in published articles. Methods: From imaging journals listed we extracted open science policy details: protocol registration, reporting guidelines, funding, ethics and conflicts of interest (COI), data sharing, and open access publishing. The 10 most recently published studies from each journal were assessed to determine adherence to these policies. We calculated the proportion of open science policies into an Open Science Score (OSS) for all journals and articles. We evaluated relationships between OSS and journal/article level variables. Results: 82 journals/820 articles were included. The OSS of journals and articles was 58.3% and 31.8%, respectively. Of the journals, 65.9% had registration and 78.1% had reporting guideline policies. 79.3% of journals were members of COPE, 81.7% had plagiarism policies, 100% required disclosure of funding, and 97.6% required disclosure of COI and ethics approval. 81.7% had data sharing policies and 15.9% were fully open access. 7.8% of articles had a registered protocol, 8.4% followed a reporting guideline, 77.4% disclosed funding, 88.7% disclosed COI, and 85.6% reported ethics approval. 12.3% of articles shared their data. 51% of articles were available through open access or as a preprint. OSS was higher for journal with DOAJ membership (80% vs 54.2%; P < .0001). Impact factor was not correlated with journal OSS. Knowledge synthesis articles has a higher OSS scores (44.5%) than prospective/retrospective studies (32.6%, 30.0%, P < .0001). Conclusion: Imaging journals endorsed just over half of open science practices considered; however, the application of these practices at the article level was lower.
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Affiliation(s)
| | - Kelly Cobey
- School of Epidemiology and Public Health, University of Ottawa Heart Institute, Ottawa, ON, Canada
| | - David Moher
- School of Epidemiology and Public Health, University of Ottawa Heart Institute, Ottawa, ON, Canada
- Centre for Journalology, Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, ON, Canada
| | - Mariska M G Leeflang
- Epidemiology and Data Science, Amsterdam University Medical Centers, University of Amsterdam, Amsterdam, The Netherlands
| | | | - Eric Lam
- Ottawa Hospital Research Institute, Ottawa, ON, Canada
| | - Paul Rooprai
- Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Ahmed Al Khalil
- Department of Radiology, Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Nabil Islam
- Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Hamza Algodi
- Faculty of Biology, University of Western Ontario, London, ON, Canada
| | - Haben Dawit
- School of Epidemiology, Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Robert Adamo
- Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Mahdi Zeghal
- Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Matthew D F McInnes
- Department of Radiology, School of Epidemiology and Public Health, Ottawa Hospital Research Institute, University of Ottawa, Ottawa, ON, Canada
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Prochnow T, Valdez D, Curran LS, Brown CT, Sammons Hackett D, Auld ME. Multifaceted Scoping Review of Black/African American Transportation and Land Use Expert Recommendations on Activity-Friendly Routes to Everyday Destinations. Health Promot Pract 2024; 25:293-308. [PMID: 36367246 DOI: 10.1177/15248399221133725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
Abstract
Promoting physical activity (PA) at the community level is a complex, multisector approach requiring researchers and practitioners to impact the individual, interpersonal, environment, and policy levels. One such strategy aiming to impact systems, policies, and environments is the Centers for Disease Control and Prevention's Activity Friendly Routes to Everyday Destinations (Routes to Destinations). This strategy specifically aims to connect pedestrian, bicycle, and public transportation systems with built environment and land use destinations. This article examines Black/African American transportation and land use experts' perspectives and concerns-across multiple mediums-around inequities that have discouraged PA among Black/African American persons specifically Routes to Destinations strategies. In March 2021, a multifaceted scoping review was conducted of peer-reviewed literature, gray literature, and social media authored by Black/African American transportation and land use experts focusing on policy, system, and environmental changes which promote or discourage equitable and inclusive access to physical activity. Themes from peer-reviewed and gray literature resources included: (1) Assessing Racism, Discrimination, and Segregation; (2) Addressing Equity and Inclusion Through Policy; (3) Community Engagement and Place-Based Interventions; (4) Infrastructure Changes; (5) Safety; and (6) Reporting Health Disparities. Twitter topic models suggested the main topics included elements of race/racism, equity, safety, infrastructure, and advancing social justice. Experts called for systemic and systematic change through new policies and implementation of existing policies as well as enhanced community inclusion in decision-making through ownership of policy and built environment change. Safety was discussed differently between peer-reviewed and gray literature and Twitter discussions indicating a publication bias.
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Affiliation(s)
| | - Danny Valdez
- Indiana University School of Public Health-Bloomington, Bloomington, IN, USA
| | | | | | | | - M Elaine Auld
- Society for Public Health Education, Washington, DC, USA
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7
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Candal-Pedreira C, Ross JS, Marušić A, Ruano-Ravina A. Research misconduct as a challenge for academic institutions and scientific journals. J Epidemiol Community Health 2023; 78:61-64. [PMID: 37666652 DOI: 10.1136/jech-2023-220554] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 08/23/2023] [Indexed: 09/06/2023]
Abstract
Research misconduct refers to a set of unethical practices in research and publication and is the main reason for retraction of articles published in the academic literature. Research misconduct has negative consequences and has generated public scepticism about research, which has led to increasing distrust in science. In this context, a joint effort by the scientific community, academic institutions, scientific journals and research funders is needed to identify and prevent research misconduct. In this paper, we will evaluate what has already been done and what is needed to do to better address research misconduct. The focus of this paper will be on the actions taken by academic institutions, as the first line of defence, and scientific journals, as the gatekeepers of science. However, scientific journals and academic institutions are only a part of a much larger and multistakeholder effort needed to address the challenges scientific research is facing.
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Affiliation(s)
- Cristina Candal-Pedreira
- Preventive Medicine and Public Health, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
- Health Research Institute of Santiago de Compostela (Instituto de Investigación Sanitaria de Santiago de Compostela-IDIS), Santiago de Compostela, Spain
| | - Joseph S Ross
- Section of General Internal Medicine and National Clinican Scholars Program, Yale University School of Medicine, New Haven, Connecticut, USA
- Department of Health Policy and Management, Yale University School of Public Health, New Haven, Connecticut, USA
- Center for Outcomes Research and Evaluation, Yale-New Haven Hospital, New Haven, Connecticut, USA
| | - Ana Marušić
- Center for Evidence-based Medicine and Department of Research in Biomedicine and Health, University of Split School of Medicine, Split, Croatia
| | - Alberto Ruano-Ravina
- Preventive Medicine and Public Health, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
- Health Research Institute of Santiago de Compostela (Instituto de Investigación Sanitaria de Santiago de Compostela-IDIS), Santiago de Compostela, Spain
- Consortium for Biomedical Research in Epidemiology and Public Health (CIBER en Epidemiología y Salud Pública-CIBERESP), Madrid, Spain
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Bolek M, Bolek C, Shopovski J, Marolov D. The consistency of peer-reviewers: Assessment of separate parts of the manuscripts vs final recommendations. Account Res 2023; 30:493-515. [PMID: 35037802 DOI: 10.1080/08989621.2022.2030719] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
Delving into the review reports, this paper is aimed at analyzing reviewers` attitudes toward different sections of the manuscripts they review. The research focuses on the consistency of reviewers` evaluation through analysis of their assessment of separate parts of a paper, if it corresponds with the recommendations they made to the editors and whether a paper needs revision or should be accepted/rejected. It is assumed that the assessment of separate parts of a paper should be consistent with the final decision regarding the acceptance or rejection of a manuscript. Based on the analysis presented in this paper it can be concluded that the assessments of separate parts of articles in the evaluation sheets do not fully reflect the final recommendations of the reviewers. The results showed that the most correlated and therefore the most significant sections for the reviewers are the main text and the conclusions. The conditional probability analysis showed that the decision of reviewers, when number of points in the evaluation sheet is taken into consideration, is slightly unpredictable. No significant differences in the reviewers` recommendations based on gender or country of origin of the reviewers were found.
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Affiliation(s)
- Monika Bolek
- Economics and Sociology Faculty, University of Lodz, Lodz, Poland
| | - Cezary Bolek
- Department of Computer Science, University of Lodz, Lodz, Poland
| | - Jovan Shopovski
- European Scientific Institute, University of Almeria, Almeria, Spain
| | - Dejan Marolov
- Department of International Relations and European Law, University Goce Delcev, Strip, N, Macedonia
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9
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Henriquez T. Open peer review, pros and cons from the perspective of an early career researcher. mBio 2023; 14:e0194823. [PMID: 37811986 PMCID: PMC10653933 DOI: 10.1128/mbio.01948-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/10/2023] Open
Abstract
Peer review is considered by many to be a fundamental component of scientific publishing. In this context, open peer review (OPR) has gained popularity in recent years as a tool to increase transparency, rigor, and inclusivity in research. But how does OPR really affect the review process? How does OPR impact specific groups, such as early career researchers? This editorial explores and discusses these aspects as well as some suggested actions for journals.
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Affiliation(s)
- Tania Henriquez
- Department of Medical Biotechnologies, University of Siena, Siena, Italy
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10
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Joubert G. A health sciences researcher's experience of manuscript review comments, 2020-2022. S Afr Fam Pract (2004) 2023; 65:e1-e5. [PMID: 37916700 PMCID: PMC10623586 DOI: 10.4102/safp.v65i1.5753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Revised: 07/04/2023] [Accepted: 08/05/2023] [Indexed: 11/03/2023] Open
Abstract
BACKGROUND Peer review frequently improves a manuscript, but authors may consider some reviewer feedback negative, inappropriate or unclear. This study aims to summarise and analyse review comments received by authors. METHODS This longitudinal study included all submissions of which the researcher was an author, reviewed by any journal during 2020-2022. First-round reviews were retrieved from emails and documents received by the authors or the faculty's medical editors or the journal platforms. A confidential datasheet with review items compiled from literature and the researcher's experience as author and reviewer was completed for each submission. Review comments were noted verbatim for subjective items such as rude or vague statements. RESULTS The 65 submissions received 118 reviews from 36 journals, mainly in the form of unstructured narrative reports (59%). The majority of first-round reviews (58%), including those for rejected submissions, contained some positive comments. Reviewers frequently (75% of reviews, 88% of submissions) required some expansion of information. Vague and incorrect statements occurred in 15% and 18% of reviews, respectively. Only two reviews contained statements that could be considered rude. The types of comments made were associated with the review format. CONCLUSION The majority of reviews contained some positive comments and rude comments were extremely rare. Reviewers frequently requested the expansion of information provided.Contribution: This study gives insight to authors, reviewers and editors regarding the type and tone of review comments. This could guide authors during manuscript preparation and authors, reviewers and editors during the review process.
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Affiliation(s)
- Gina Joubert
- Department of Biostatistics, Faculty of Health Sciences, University of the Free State, Bloemfontein.
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11
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Otto JL, McDowell GS, Balgopal MM, Lijek RS. Preprint Peer Review Enhances Undergraduate Biology Students' Disciplinary Literacy and Sense of Belonging in STEM. JOURNAL OF MICROBIOLOGY & BIOLOGY EDUCATION 2023; 24:e00053-23. [PMID: 37614887 PMCID: PMC10443316 DOI: 10.1128/jmbe.00053-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Accepted: 05/22/2023] [Indexed: 08/25/2023]
Abstract
Education about scientific publishing and manuscript peer review is not universally provided in undergraduate science courses. Since peer review is integral to the scientific process and central to the identity of a scientist, we envision a paradigm shift where teaching peer review becomes integral to undergraduate science education. We hypothesize that teaching undergraduates how to peer review scientific manuscripts may facilitate their development of scientific literacy and identity formation. To this end, we developed a constructivist, service-learning curriculum for biology undergraduates to learn about the mechanisms of peer review using preprints and then to write and publish their own peer reviews of preprints as a way to authentically join the scientific community of practice. The curriculum was implemented as a semester-long intervention in one class and, in another class, as an embedded module intervention. Students' scientific literacy and peer review ability were assessed using quantitative methods. Student's perceptions of their scientific literacy and identity were assessed using thematic analysis of students' reflective writing. Here, we present data on the improvement in the peer review ability of undergraduates in both classes and data on the curriculum's interrelated impact on students' development of scientific literacy, identity, and belonging in peer and professional discourse spaces. These data suggest that undergraduates can and should be trained in peer review to foster the interrelated development of their scientific literacy, scientific identity, and sense of belonging in science.
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Affiliation(s)
- Josie L. Otto
- Colorado State University, Fort Collins, Colorado, USA
| | - Gary S. McDowell
- Lightoller LLC, Chicago, Illinois, USA
- Ronin Institute, Montclair, New Jersey, USA
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12
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Waltman L, Kaltenbrunner W, Pinfield S, Woods HB. How to improve scientific peer review: Four schools of thought. LEARNED PUBLISHING 2023; 36:334-347. [PMID: 38504796 PMCID: PMC10946616 DOI: 10.1002/leap.1544] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2022] [Revised: 02/20/2023] [Accepted: 03/29/2023] [Indexed: 03/21/2024]
Abstract
Peer review plays an essential role as one of the cornerstones of the scholarly publishing system. There are many initiatives that aim to improve the way in which peer review is organized, resulting in a highly complex landscape of innovation in peer review. Different initiatives are based on different views on the most urgent challenges faced by the peer review system, leading to a diversity of perspectives on how the system can be improved. To provide a more systematic understanding of the landscape of innovation in peer review, we suggest that the landscape is shaped by four schools of thought: The Quality & Reproducibility school, the Democracy & Transparency school, the Equity & Inclusion school, and the Efficiency & Incentives school. Each school has a different view on the key problems of the peer review system and the innovations necessary to address these problems. The schools partly complement each other, but we argue that there are also important tensions between them. We hope that the four schools of thought offer a useful framework to facilitate conversations about the future development of the peer review system.
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Affiliation(s)
- Ludo Waltman
- Centre for Science and Technology Studies (CWTS)Leiden UniversityLeidenThe Netherlands
- Research on Research Institute (RoRI)UK
| | - Wolfgang Kaltenbrunner
- Centre for Science and Technology Studies (CWTS)Leiden UniversityLeidenThe Netherlands
- Research on Research Institute (RoRI)UK
| | - Stephen Pinfield
- Research on Research Institute (RoRI)UK
- Information SchoolUniversity of SheffieldSheffieldUK
| | - Helen Buckley Woods
- Research on Research Institute (RoRI)UK
- Information SchoolUniversity of SheffieldSheffieldUK
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13
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Huh S. Recent Issues in Medical Journal Publishing and Editing Policies: Adoption of Artificial Intelligence, Preprints, Open Peer Review, Model Text Recycling Policies, Best Practice in Scholarly Publishing 4th Version, and Country Names in Titles. Neurointervention 2023; 18:2-8. [PMID: 36720475 PMCID: PMC9986353 DOI: 10.5469/neuroint.2022.00493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Accepted: 01/21/2023] [Indexed: 02/02/2023] Open
Abstract
In Korea, many editors of medical journal are also publishers; therefore, they need to not only manage peer review, but also understand current trends and policies in journal publishing and editing. This article aims to highlight some of these policies with examples. First, the use of artificial intelligence tools in journal publishing has increased, including for manuscript editing and plagiarism detection. Second, preprint publications, which have not been peer-reviewed, are becoming more common. During the COVID-19 pandemic, medical journals have been more willing to accept preprints to adjust rapidly changing pandemic health issues, leading to a significant increase in their use. Third, open peer review with reviewer comments is becoming more widespread, including the mandatory publication of peer-reviewed manuscripts with comments. Fourth, model text recycling policies provide guidelines for researchers and editors on how to appropriately recycle text, for example, in the background section of the Introduction or the Methods section. Fifth, journals should take into account the recently updated 4th version of the Principles of Transparency and Best Practice in Scholarly Publishing, released in 2022. This version includes more detailed guidelines on journal websites, peer review processes, advisory boards, and author fees. Finally, it recommends that titles of human studies include country names to clarify the cultural context of the research. Each editor must decide whether to adopt these six policies for their journals. Editor-publishers of society journals are encouraged to familiarize themselves with these policies so that they can implement them in their journals as appropriate.
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Affiliation(s)
- Sun Huh
- Department of Parasitology, Institute of Medical Education, College of Medicine, Hallym University, Chuncheon, Korea
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14
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Cobey KD, Haustein S, Brehaut J, Dirnagl U, Franzen DL, Hemkens LG, Presseau J, Riedel N, Strech D, Alperin JP, Costas R, Sena ES, van Leeuwen T, Ardern CL, Bacellar IOL, Camack N, Britto Correa M, Buccione R, Cenci MS, Fergusson DA, Gould van Praag C, Hoffman MM, Moraes Bielemann R, Moschini U, Paschetta M, Pasquale V, Rac VE, Roskams-Edris D, Schatzl HM, Stratton JA, Moher D. Community consensus on core open science practices to monitor in biomedicine. PLoS Biol 2023; 21:e3001949. [PMID: 36693044 PMCID: PMC9873153 DOI: 10.1371/journal.pbio.3001949] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
The state of open science needs to be monitored to track changes over time and identify areas to create interventions to drive improvements. In order to monitor open science practices, they first need to be well defined and operationalized. To reach consensus on what open science practices to monitor at biomedical research institutions, we conducted a modified 3-round Delphi study. Participants were research administrators, researchers, specialists in dedicated open science roles, and librarians. In rounds 1 and 2, participants completed an online survey evaluating a set of potential open science practices, and for round 3, we hosted two half-day virtual meetings to discuss and vote on items that had not reached consensus. Ultimately, participants reached consensus on 19 open science practices. This core set of open science practices will form the foundation for institutional dashboards and may also be of value for the development of policy, education, and interventions.
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Affiliation(s)
- Kelly D. Cobey
- University of Ottawa Heart Institute, Ottawa, Ontario, Canada
- School of Epidemiology and Public Health, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Stefanie Haustein
- School of Information Studies, Faculty of Arts, University of Ottawa, Ottawa, Ontario, Canada
- Scholarly Communications Lab, Ottawa and Vancouver, Canada
| | - Jamie Brehaut
- School of Epidemiology and Public Health, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Ontario, Canada
| | - Ulrich Dirnagl
- Department of Experimental Neurology, Charité-Universitätsmedizin Berlin, Berlin, Germany
- QUEST Center for Responsible Research, Berlin Institute of Health at Charité-Universitätsmedizin Berlin, Berlin, Germany
| | - Delwen L. Franzen
- QUEST Center for Responsible Research, Berlin Institute of Health at Charité-Universitätsmedizin Berlin, Berlin, Germany
| | - Lars G. Hemkens
- QUEST Center for Responsible Research, Berlin Institute of Health at Charité-Universitätsmedizin Berlin, Berlin, Germany
- Department of Clinical Research, University of Basel and University Hospital Basel, Basel, Switzerland
- Meta-Research Innovation Center at Stanford (METRICS), Stanford University, Stanford, California, United States of America
| | - Justin Presseau
- School of Epidemiology and Public Health, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Ontario, Canada
- School of Psychology, Faculty of Social Science, University of Ottawa, Ottawa, Ontario, Canada
| | - Nico Riedel
- Department of Experimental Neurology, Charité-Universitätsmedizin Berlin, Berlin, Germany
| | - Daniel Strech
- Department of Experimental Neurology, Charité-Universitätsmedizin Berlin, Berlin, Germany
- Meta-Research Innovation Center Berlin (METRIC-B), Berlin Institute of Health, Berlin, Germany
| | - Juan Pablo Alperin
- Scholarly Communications Lab, Ottawa and Vancouver, Canada
- School of Publishing, Simon Fraser University, Vancouver, British Columbia, Canada
| | - Rodrigo Costas
- Centre for Science and Technology Studies (CWTS), Leiden University, Leiden, the Netherlands
| | - Emily S. Sena
- Centre for Clinical Brain Sciences, University of Edinburgh, Edinburgh, United Kingdom
| | - Thed van Leeuwen
- Centre for Science and Technology Studies (CWTS), Leiden University, Leiden, the Netherlands
| | - Clare L. Ardern
- Sport and Exercise Medicine Research Centre, La Trobe University, Melbourne, Victoria, Australia
- Department of Family Practice, University of British Columbia, Vancouver, British Columbia, Canada
| | | | - Nancy Camack
- Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Ontario, Canada
| | | | | | | | - Dean A. Fergusson
- School of Epidemiology and Public Health, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Ontario, Canada
| | | | - Michael M. Hoffman
- Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada
- Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada
- Department of Computer Science, University of Toronto, Toronto, Ontario, Canada
- Vector Institute for Artificial Intelligence, Toronto, Ontario, Canada
| | | | | | | | | | - Valeria E. Rac
- Program for Health System and Technology Evaluation, Ted Rogers Centre for Heart Research at Peter Munk Cardiac Centre, Toronto General Hospital Research Institute (TGHRI), University Health Network (UHN), Toronto, Ontario, Canada
- Institute of Health Policy, Management and Evaluation (IHPME), Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada
- Diabetes Action Canada, CIHR SPOR Network, Toronto, Canada
| | - Dylan Roskams-Edris
- Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
- Tanenbaum Open Science Institute, McGill University, Montreal, Quebec, Canada
| | - Hermann M. Schatzl
- Department of Comparative Biology & Experimental Medicine, University of Calgary, Calgary, Alberta, Canada
| | - Jo Anne Stratton
- Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| | - David Moher
- School of Epidemiology and Public Health, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Ontario, Canada
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15
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Melero R, Boté‐Vericad J, López‐Borrull A. Perceptions regarding open science appraised by editors of scholarly publications published in Spain. LEARNED PUBLISHING 2022. [DOI: 10.1002/leap.1511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Remedios Melero
- Instituto de Agroquímica y Tecnología de Alimentos‐CSIC Paterna Valencia Spain
| | - Juan‐José Boté‐Vericad
- Departament de Biblioteconomia, Documentació i Comunicació Audiovisual & Centre de Recerca en Informació Comunicació i Cultura. Universitat de Barcelona Barcelona Spain
| | - Alexandre López‐Borrull
- Universitat Oberta de Catalunya Estudis de Ciències de la Informació i la Comunicació Rambla del Poblenou, 156 Barcelona 08018 Barcelona Spain
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16
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Vivarelli M. role of peer review in the evaluation of research in Italy. Some remarks on the evaluation of PRINs. JLIS.IT 2022. [DOI: 10.36253/jlis.it-500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
This contribution proposes some remarks on the evaluation and financing mechanisms of PRINs – Progetti di Rilevante Interesse Nazionale, promoted in Italy by the MUR - Ministry of University and Research, in the context of the critical issues and evolution prospects of peer review, of which a summary state of the art is presented. Starting from the partial and incomplete data made available on the MUR website dedicated to PRINs, are listed and examined the projects financed for the current disciplinary sector M-STO/08 (Archival Science, Bibliography and Librarianship), in the years between 1996 and 2020, and those included in other disciplinary areas that have as their subject matters related to the contents of the academic field M-STO/08.
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17
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Capaccioni A. Open peer review: some considerations on the selection and management of reviewers. JLIS.IT 2022. [DOI: 10.36253/jlis.it-508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Open peer review (OPR) is a type of review that has long since made space alongside the more well-known single-blind and double-blind peer reviews. Despite this, we still do not have a shared definition by the scientific community and publishers. The purpose of this paper is to offer some reflections on the selection of reviewers in OPR, a process that in its current configuration is traced back to the 19th century. After a brief overview of the best-known definitions of open peer review, the paper continues with an analysis of some aspects of reviewer selection carried out with the help of data from a recent survey.
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18
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Abadal E, Melero R. Open peer review: the point of view of scientific journal editors. JLIS.IT 2022. [DOI: 10.36253/jlis.it-507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Academic journals have been incorporating several elements of open science: open access (since 2000), later, the deposit of research data of the articles published, the dissemination of preprints before the publication of the paper and, finally, the open peer review (OPR). While open access is well-established and the inclusion of research data is increasingly widespread, the OPR is just at the beginning of its incorporation as a real alternative to the double-blind model, which is the most widespread and consolidated.
The objective of our article is to analyse the opinion of the editors of Spanish scientific journals about the advantages and disadvantages or barriers for the implementation of the OPR. This is a qualitative study that has been carried out from the open answers of a questionnaire sent to the 1875 editors of the Spanish academic journals that appear in the database Dulcinea and that obtained a response of 22.4%. Regarding the limitations, the study is based on the opinions and experience of the editors of Spanish scientific journals, which are mostly published by academic institutions and are in the field of social sciences and humanities.
The results focus on delving into the advantages and disadvantages. Among the encouraging factors, the editors point out that to have open reports is very useful for the scientific community, that it recognizes the role of the reviewer, makes it possible to control the arbitrariness of some reviewers, and that it promotes the reviewer-author dialogue. The main barriers discussed are the following: a possible lack of objectivity and rigor, resistance to change a consolidated system (“double-blind”), knowing the author benefits established authors and harms novices, more difficulties for finding reviewers, increases costs and can lengthen the review process.
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19
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Fattahi R, Rajabali Beglou R, Akhshik SS. Peer review ethics in Iranian LIS scholarly journals: a comparison between views of reviewers and authors. JLIS.IT 2022. [DOI: 10.36253/jlis.it-504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Peer review is one of the most efficient ways to ensure the quality of papers for possible publication in scholarly journals. However, the process of peer review is not free of bias and disorders. Many reviewers are unaware of how their attitudes towards the evaluation of scholarly papers may violate Peer Review Ethics (PRE). This paper attempts to analyze the different ethical issues influencing the job of reviewing. The research sample for this study included 7 Iranian library and information journals, 124 Iranian peer reviewers, and 34 authors. Peer reviewers and authors were asked to evaluate the most important ethical elements of peer review in Iranian LIS journals through two different questionnaires based on Rajabali Beglou et al. (2019) research.
Findings showed that there was no difference among authors and reviewers in terms of gender in most PRE elements. Also, the level of experience of the authors was not significant in terms of understanding and acceptance of the PRE among reviewers and authors. However, review experiences regarding some PRE elements were significant in respondents’ viewpoints. The experiences reviewers had already gained were influential on their views about PRE. In addition, results showed that there were significant differences among reviewers and authors about the PRE elements in LIS journals. Authorship experiences had not effect on the PRE elements and the dual role of peer reviewing and authorship had no impact on their views.
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20
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Rodrigues E. [Open Science: Emergency Response or the New Normal?]. ACTA MEDICA PORT 2022; 35:853-855. [PMID: 36469941 DOI: 10.20344/amp.19200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Accepted: 10/14/2022] [Indexed: 12/05/2022]
Affiliation(s)
- Eloy Rodrigues
- Unidade de Serviços de Documentação e Bibliotecas. Universidade do Minho. Braga. Portugal
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21
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Khalil AT, Shinwari ZK, Islam A. Fostering openness in open science: An ethical discussion of risks and benefits. FRONTIERS IN POLITICAL SCIENCE 2022; 4. [DOI: 10.3389/fpos.2022.930574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
Transformation of science by embracing the concepts of open science presents a very attractive strategy to enhance the reliability of science. Open science policies embody the concepts of open data and open access that encompass sharing of resources, dissemination of ideas, and synergizing the collaborative forums of research. Despite the opportunities in openness, however, there are grave ethical concerns too, and they present a dual-use dilemma. Access to sensitive information is seen as a security risk, and it also possesses other concerns such as confidentiality, privacy, and affordability. There are arguments that open science can be harmful to marginalized groups. Through this study, we aim to discuss the opportunities of open science, as well as the ethical and security aspects, which require further deliberation before full-fledged acceptance in the science community.
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22
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A validation study on the factors affecting the practice modes of open peer review. Scientometrics 2022. [DOI: 10.1007/s11192-022-04552-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
Abstract
AbstractIn this paper we conduct a validation study on the factors affecting the practice modes of open peer review. Taking the Open Access Journals (OAJ) in Directory of Open Access Journals (DOAJ) as the research objects, we crawled the internet to gather their relevant data. Based on the method of categorical variable assignment, a quantitative analysis was performed on the qualitative factors that affect the practice modes of open peer review. A multi-dimensional analysis chart is used to illustrate the relationships between the factors. Optimal scale regression modeling and discriminant analysis were also employed to reveal the degrees of influences by the factors. The public categories of “type of open peer review” and “reviewer identity” are closely related to each other. “Reviewer identity” has evident positive influence on “type of open peer review”, and the degree of influence is the highest. Therefore, “reviewer identity” is the primary and most crucial factor affecting open peer review practice modes. “Review report” and “order of review report and publication” are the secondary ones. Whether or not the identities of review experts are open has become the most important factor affecting the practice modes of open peer review. Transparent peer review is currently the most effective practice mode of open peer review. Technologies like block chain can be used to address the psychological uneasiness for the peer review experts who are concerned with privacy issues. The fact that most OAJs use “pre-publication review” shows that open peer review still plays the traditional role of “academic goalkeeper”. Publication of peer review reports actually helps peer review experts augment their reputation, which in turn practically promotes the development of open peer review.
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Munasinghe BM, Chapman C, Hewavitharane C, Hewawasam G, Dissanayakege TG. Investing in the Academic Writing: Training Future Reviewers and Sustaining Efficient and Quality Peer Review. Cureus 2022; 14:e30341. [PMID: 36407275 PMCID: PMC9665924 DOI: 10.7759/cureus.30341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/15/2022] [Indexed: 06/16/2023] Open
Abstract
Peer reviewers are considered gatekeepers in academic writing who play a pivotal and essential role during the publication process. Excellent manuscripts invariably need excellent reviewers. Producing peer reviewers with such caliber is time-consuming albeit necessary for the progress and continuity of academia. Despite the popular belief that an experienced author invariably makes a good reviewer, the reality is far-fetched. This suggests the need for peer reviewer training, which should be effective, logistically affordable, and demonstrate long-lasting positive impacts. Open review, co-review, and several reviewer training programs are already in place for this purpose with varying efficiencies. This narrative review discusses the current modalities available to a junior reviewer to improve his/her review skills and proposes a reviewer residency concept that could be adopted as a part of peer reviewer training.
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Affiliation(s)
- B M Munasinghe
- Anesthesiology and Critical Care, Queen Elizabeth The Queen Mother Hospital, Margate, GBR
| | - Champa Chapman
- Anesthesiology and Critical Care, Queen Elizabeth The Queen Mother Hospital, Margate, GBR
| | | | - Gayathri Hewawasam
- Anesthesiology and Critical Care, Queen Elizabeth The Queen Mother Hospital, Margate, GBR
| | - T G Dissanayakege
- Anesthesiology and Critical Care, Queen Elizabeth The Queen Mother Hospital, Margate, GBR
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24
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The Role of Publons in the Context of Open Peer Review. PUBLISHING RESEARCH QUARTERLY 2022. [PMCID: PMC9484842 DOI: 10.1007/s12109-022-09914-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Publons was a peer reviewer rewards platform that aimed to recognize the contribution that academics made during peer review to a journal. For about 10 years of its existence, Publons became the most popular service among peer reviewers. Having gained traction and popularity, Publons was purchased in 2017 by Clarivate Analytics (now Clarivate), and many academics, journals and publishers invested time and effort to participate in Publons. Using Publons, various peer review-related experiments or pilot programs were initiated by some academic publishers regarding the introduction of open peer review into their journals’ editorial processes. In this paper, we examine pertinent literature related to Publons, and reflect on its benefits and flaws during its short-lived history. In mid-August 2022, Clarivate fused Publons into the Web of Science platform. Publons, as a brand peer review service, has now ceased to exist but some of the functionality remains in Web of Science while other aspects that used to be open and free at Publons are now paid-for services. We reflect on the effect of such experiments, which initially had bold and ambitious academic objectives to fortify peer review, on academics’ trust, especially when such projects become commercialized.
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25
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Kaltenbrunner W, Pinfield S, Waltman L, Woods HB, Brumberg J. Innovating peer review, reconfiguring scholarly communication: an analytical overview of ongoing peer review innovation activities. JOURNAL OF DOCUMENTATION 2022. [DOI: 10.1108/jd-01-2022-0022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
Abstract
PurposeThe study aims to provide an analytical overview of current innovations in peer review and their potential impacts on scholarly communication.Design/methodology/approachThe authors created a survey that was disseminated among publishers, academic journal editors and other organizations in the scholarly communication ecosystem, resulting in a data set of 95 self-defined innovations. The authors ordered the material using a taxonomy that compares innovation projects according to five dimensions. For example, what is the object of review? How are reviewers recruited, and does the innovation entail specific review foci?FindingsPeer review innovations partly pull in mutually opposed directions. Several initiatives aim to make peer review more efficient and less costly, while other initiatives aim to promote its rigor, which is likely to increase costs; innovations based on a singular notion of “good scientific practice” are at odds with more pluralistic understandings of scientific quality; and the idea of transparency in peer review is the antithesis to the notion that objectivity requires anonymization. These fault lines suggest a need for better coordination.Originality/valueThis paper presents original data that were analyzed using a novel, inductively developed, taxonomy. Contrary to earlier research, the authors do not attempt to gauge the extent to which peer review innovations increase the “reliability” or “quality” of reviews (as defined according to often implicit normative criteria), nor are they trying to measure the uptake of innovations in the routines of academic journals. Instead, they focus on peer review innovation activities as a distinct object of analysis.
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26
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McDowell GS, Fankhauser S, Saderi D, Balgopal M, Lijek RS. Use of preprint peer review to educate and enculturate science undergraduates. LEARNED PUBLISHING 2022. [DOI: 10.1002/leap.1472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
| | - Sarah Fankhauser
- Department of Biology Oxford College of Emory University Oxford Georgia USA
| | | | - Meena Balgopal
- Department of Biology Colorado State University Fort Collins Colorado USA
| | - Rebeccah S. Lijek
- Department of Biological Sciences Mount Holyoke College South Hadley Massachusetts USA
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27
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Reichmann S, Wieser B. Open science at the science-policy interface: bringing in the evidence? Health Res Policy Syst 2022; 20:70. [PMID: 35725491 PMCID: PMC9208144 DOI: 10.1186/s12961-022-00867-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2021] [Accepted: 05/16/2022] [Indexed: 12/04/2022] Open
Abstract
Part of the current enthusiasm about open science stems from its promises to reform scientific practice in service of the common good, to ensure that scientific outputs will be found and reused more easily, and to enhance scientific impact on policy and society. With this article, we question this optimism by analysing the potential for open science practices to enhance research uptake at the science–policy interface. Science advice is critical to help policy-makers make informed decisions. Likewise, some interpretations of open science hold that making research processes and outputs more transparent and accessible will also enhance the uptake of results by policy and society at large. However, we argue that this hope is based on an unjustifiably simplistic understanding of the science–policy interface that leaves key terms (“impact”, “uptake”) undefined. We show that this understanding—based upon linear models of research uptake—likewise grounds the influential “evidence–policy gap” diagnosis which holds that to improve research uptake, communication and interaction between researchers and policy-makers need to be improved. The overall normative stance of both discussions has sidelined empirical description of the science–policy interface, ignoring questions about the underlying differences between the policy domain and academia. Importantly, both open science and literature on closing the evidence–policy gap recommend improving communication (in terms of either the content or the means) as a viable strategy. To correct some of these views, we combine insights from policy theory with a narrative review of the literature on the evidence–policy gap in the health domain and find that removing barriers to access by itself will not be enough to foster research uptake.
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28
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Mahony S. Toward openness and transparency to better facilitate knowledge creation. J Assoc Inf Sci Technol 2022. [DOI: 10.1002/asi.24652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Simon Mahony
- Research Centre for Digital Publishing and Digital Humanities Beijing Normal University at Zhuhai Zhuhai Guangdong China
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29
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Houghton F. Keep calm and carry on: moral panic, predatory publishers, peer review, and the emperor's new clothes. J Med Libr Assoc 2022; 110:233-239. [PMID: 35440900 PMCID: PMC9014923 DOI: 10.5195/jmla.2022.1441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
The moral panic over the impact of so-called predatory publishers continues unabated. It is important, however, to resist the urge to simply join in this crusade without pausing to examine the assumptions upon which such concerns are based. It is often assumed that established journals are almost sacrosanct, and that their quality, secured by peer review, is established. It is also routinely presumed that such journals are immune to the lure of easy money in return for publication. Rather than looking at the deficits that may be apparent in the practices and products of predatory publishers, this commentary invites you to explore the weaknesses that have been exposed in traditional academic journals but are seldom discussed in the context of predatory publishing. The inherent message for health and medical services staff, researchers, academics, and students is, as always, to critically evaluate all sources of information, whatever their provenance.
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Affiliation(s)
- Frank Houghton
- , Director of Social Sciences ConneXions, Technological University of the Shannon, Limerick, Ireland
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30
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Emile SH, Hamid HKS, Atici SD, Kosker DN, Papa MV, Elfeki H, Tan CY, El-Hussuna A, Wexner SD. Types, limitations, and possible alternatives of peer review based on the literature and surgeons’ opinions via Twitter: a narrative review. SCIENCE EDITING 2022. [DOI: 10.6087/kcse.257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
This review aimed to illustrate the types, limitations, and possible alternatives of peer review (PR) based on a literature review together with the opinions of a social media audience via Twitter. This study was conducted via the #OpenSourceResearch collaborative platform and combined a comprehensive literature search on the current PR system with the opinions of a social media audience of surgeons who are actively engaged in the current PR system. Six independent researchers conducted a literature search of electronic databases in addition to Google Scholar. Electronic polls were organized via Twitter to assess surgeons’ opinions on the current PR system and potential alternative approaches. PR can be classified into single-blind, double-blind, triple-blind, and open PR. Newer PR systems include interactive platforms, prepublication and postpublication commenting or review, transparent review, and collaborative review. The main limitations of the current PR system are its allegedly time-consuming nature and inconsistent, biased, and non-transparent results. Suggestions to improve the PR process include employing an interactive, double-blind PR system, using artificial intelligence to recruit reviewers, providing incentives for reviewers, and using PR templates. The above results offer several concepts for possible alternative approaches and modifications to this critically important process.
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31
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Grant S, Wendt KE, Leadbeater BJ, Supplee LH, Mayo-Wilson E, Gardner F, Bradshaw CP. Transparent, Open, and Reproducible Prevention Science. PREVENTION SCIENCE : THE OFFICIAL JOURNAL OF THE SOCIETY FOR PREVENTION RESEARCH 2022; 23:701-722. [PMID: 35175501 PMCID: PMC9283153 DOI: 10.1007/s11121-022-01336-w] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/05/2022] [Indexed: 01/20/2023]
Abstract
The field of prevention science aims to understand societal problems, identify effective interventions, and translate scientific evidence into policy and practice. There is growing interest among prevention scientists in the potential for transparency, openness, and reproducibility to facilitate this mission by providing opportunities to align scientific practice with scientific ideals, accelerate scientific discovery, and broaden access to scientific knowledge. The overarching goal of this manuscript is to serve as a primer introducing and providing an overview of open science for prevention researchers. In this paper, we discuss factors motivating interest in transparency and reproducibility, research practices associated with open science, and stakeholders engaged in and impacted by open science reform efforts. In addition, we discuss how and why different types of prevention research could incorporate open science practices, as well as ways that prevention science tools and methods could be leveraged to advance the wider open science movement. To promote further discussion, we conclude with potential reservations and challenges for the field of prevention science to address as it transitions to greater transparency, openness, and reproducibility. Throughout, we identify activities that aim to strengthen the reliability and efficiency of prevention science, facilitate access to its products and outputs, and promote collaborative and inclusive participation in research activities. By embracing principles of transparency, openness, and reproducibility, prevention science can better achieve its mission to advance evidence-based solutions to promote individual and collective well-being.
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Affiliation(s)
- Sean Grant
- Department of Social & Behavioral Sciences, Fairbanks School of Public Health, Indiana University Richard M, 1050 Wishard Blvd, Indianapolis, IN, 46202, USA.
| | - Kathleen E Wendt
- Department of Human Development and Family Studies, Colorado State University, Fort Collins, CO, USA
| | | | | | - Evan Mayo-Wilson
- Department of Epidemiology and Biostatistics, Indiana University School of Public Health-Bloomington, Bloomington, IN, USA
| | - Frances Gardner
- Department of Social Policy and Intervention, University of Oxford, Oxford, UK
| | - Catherine P Bradshaw
- School of Education & Human Development, University of Virginia, Charlottesville, VA, USA
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32
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Kazi S, Frank RA, Salameh J, Fabiano N, Absi M, Pozdnyakov A, Islam N, Korevaar DA, Cohen JF, Bossuyt PM, Leeflang MM, Cobey KD, Moher D, Schweitzer M, Menu Y, Patlas M, McInnes MD. Evaluating the Impact of Peer Review on the Completeness of Reporting in Imaging Diagnostic Test Accuracy Research. J Magn Reson Imaging 2022; 56:680-690. [DOI: 10.1002/jmri.28116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2021] [Revised: 01/28/2022] [Accepted: 02/02/2022] [Indexed: 11/08/2022] Open
Affiliation(s)
- Sakib Kazi
- Faculty of Medicine University of Ottawa Ottawa Ontario Canada
| | - Robert A. Frank
- Department of Radiology, Faculty of Medicine University of Ottawa Ottawa Ontario Canada
| | - Jean‐Paul Salameh
- Faculty of Health Sciences Queen's University Kingston Ontario Canada
- Clinical Epidemiology Program Ottawa Hospital Research Institute Ottawa Ontario Canada
| | | | - Marissa Absi
- Faculty of Medicine University of Ottawa Ottawa Ontario Canada
| | - Alex Pozdnyakov
- Michael G. DeGroote School of Medicine McMaster University Hamilton Ontario Canada
| | - Nayaar Islam
- Clinical Epidemiology Program Ottawa Hospital Research Institute Ottawa Ontario Canada
- School of Epidemiology and Public Health University of Ottawa Ottawa Ontario Canada
| | - Daniël A. Korevaar
- Department of Respiratory Medicine Amsterdam University Medical Centers, University of Amsterdam Amsterdam Netherlands
| | - Jérémie F. Cohen
- Department of Pediatrics Inserm UMR 1153 (Centre of Research in Epidemiology and Statistics), Necker–Enfants Malades Hospital, Assistance Publique – Hôpitaux de Paris Université de Paris Paris France
| | - Patrick M. Bossuyt
- Epidemiology and Data Science, Amsterdam Public Health Research Institute, Amsterdam UMC University of Amsterdam Amsterdam Netherlands
| | - Mariska M.G. Leeflang
- Epidemiology and Data Science, Amsterdam Public Health Research Institute, Amsterdam UMC University of Amsterdam Amsterdam Netherlands
| | - Kelly D. Cobey
- The University of Ottawa Heart Institute Ottawa Ontario Canada
| | - David Moher
- Centre for Journalology, Clinical Epidemiology Program Ottawa Hospital Research Institute, University of Ottawa Ottawa Ontario Canada
| | - Mark Schweitzer
- Department of Radiology Wayne State University School of Medicine Detroit Michigan USA
| | - Yves Menu
- Department of Radiology Sorbonne Université‐APHP Paris France
| | - Michael Patlas
- Department of Radiology McMaster University Hamilton Ontario Canada
| | - Matthew D.F. McInnes
- Clinical Epidemiology Program Ottawa Hospital Research Institute Ottawa Ontario Canada
- Department of Radiology University of Ottawa Ottawa Ontario Canada
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33
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Woods HB, Brumberg J, Kaltenbrunner W, Pinfield S, Waltman L. An overview of innovations in the external peer review of journal manuscripts. Wellcome Open Res 2022; 7:82. [PMID: 36879926 PMCID: PMC9984734 DOI: 10.12688/wellcomeopenres.17715.2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/11/2023] [Indexed: 01/28/2023] Open
Abstract
Background: There are currently numerous innovations in peer review and quality assurance in scholarly publishing. The Research on Research Institute conducted a programme of co-produced projects investigating these innovations. This literature review was part of one such project 'Experiments in peer review' which created an inventory and framework of peer review innovations. The aim of this literature review was to aid the development of the inventory by identifying innovations in the external peer review of journal manuscripts reported in the scholarly literature and by providing a summary of the different approaches. This did not include interventions in editorial processes. Methods: This review of reviews is based on data identified from Web of Science and Scopus limited from 2010 to 2021. A total of 291 records were screened, with six review articles chosen for the focus of the literature review. Items were selected that described approaches to innovating peer review or illustrated examples. Results: The overview of innovations are drawn from six review articles. The innovations are divided into three high-level categories: approaches to peer review, reviewer focussed initiatives and technology to support peer review with sub-categories of results presented in tabular form and summarised. A summary of all innovations found is also presented. Conclusions: From a simple synthesis of the review authors' conclusions, three key messages are presented: observations on current practice; authors' views on the implications of innovations in peer review; and calls for action in peer review research and practice.
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Affiliation(s)
- Helen Buckley Woods
- Research on Research Institute and Information School, The University of Sheffield, Sheffield, South Yorkshire, S10 2TN, UK
| | | | - Wolfgang Kaltenbrunner
- Research on Research Institute and Centre for Science and Technology Studies, Leiden University, Leiden, The Netherlands
| | - Stephen Pinfield
- Research on Research Institute and Information School, The University of Sheffield, Sheffield, South Yorkshire, S10 2TN, UK
| | - Ludo Waltman
- Research on Research Institute and Centre for Science and Technology Studies, Leiden University, Leiden, The Netherlands
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Woods HB, Brumberg J, Kaltenbrunner W, Pinfield S, Waltman L. Innovations in peer review in scholarly publishing: a meta-summary. Wellcome Open Res 2022; 7:82. [PMID: 36879926 PMCID: PMC9984734 DOI: 10.12688/wellcomeopenres.17715.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/23/2022] [Indexed: 11/20/2022] Open
Abstract
Background: There are currently numerous innovations in peer review and quality assurance in scholarly publishing. The Research on Research Institute conducted a programme of co-produced projects investigating these innovations. This literature review was part of one such project 'Experiments in peer review' which created an inventory and framework of peer review innovations. The aim of this literature review was to aid the development of the inventory by identifying innovations in peer review reported in the scholarly literature and by providing a summary of the different approaches. Methods: This meta-summary is based on data identified from Web of Science and Scopus limited from 2010 to 2021. A total of 247 papers were screened, with 6 review articles chosen for the focus of the literature review. Items were selected that described approaches to innovating peer review or illustrated examples. Results: The summary of innovations are drawn from 6 review articles. The innovations are divided into three high-level categories: approaches to peer review, reviewer focussed initiatives and technology to support peer review with sub-categories of results presented in tabular form and summarised. A summary of all innovations found is also presented. Conclusions: From a simple synthesis of the review authors' conclusions, three key messages are presented: observations on current practice; authors' views on the implications of innovations in peer review; and calls for action in peer review research and practice.
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Affiliation(s)
- Helen Buckley Woods
- Research on Research Institute and Information School, The University of Sheffield, Sheffield, South Yorkshire, S10 2TN, UK
| | | | - Wolfgang Kaltenbrunner
- Research on Research Institute and Centre for Science and Technology Studies, Leiden University, Leiden, The Netherlands
| | - Stephen Pinfield
- Research on Research Institute and Information School, The University of Sheffield, Sheffield, South Yorkshire, S10 2TN, UK
| | - Ludo Waltman
- Research on Research Institute and Centre for Science and Technology Studies, Leiden University, Leiden, The Netherlands
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O’Brien BC, Artino AR, Costello JA, Driessen E, Maggio LA. Transparency in peer review: Exploring the content and tone of reviewers' confidential comments to editors. PLoS One 2021; 16:e0260558. [PMID: 34843564 PMCID: PMC8629260 DOI: 10.1371/journal.pone.0260558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Accepted: 10/26/2021] [Indexed: 11/23/2022] Open
Abstract
Purpose Recent calls to improve transparency in peer review have prompted examination of many aspects of the peer-review process. Peer-review systems often allow confidential comments to editors that could reduce transparency to authors, yet this option has escaped scrutiny. Our study explores 1) how reviewers use the confidential comments section and 2) alignment between comments to the editor and comments to authors with respect to content and tone. Methods Our dataset included 358 reviews of 168 manuscripts submitted between January 1, 2019 and August 24, 2020 to a health professions education journal with a single blind review process. We first identified reviews containing comments to the editor. Then, for the reviews with comments, we used procedures consistent with conventional and directed qualitative content analysis to develop a coding scheme and code comments for content, tone, and section of the manuscript. For reviews in which the reviewer recommended “reject,” we coded for alignment between reviewers’ comments to the editor and to authors. We report descriptive statistics. Results 49% of reviews contained comments to the editor (n = 176). Most of these comments summarized the reviewers’ impression of the article (85%), which included explicit reference to their recommended decision (44%) and suitability for the journal (10%). The majority of comments addressed argument quality (56%) or research design/methods/data (51%). The tone of comments tended to be critical (40%) or constructive (34%). For the 86 reviews recommending “reject,” the majority of comments to the editor contained content that also appeared in comments to the authors (80%); additional content tended to be irrelevant to the manuscript. Tone frequently aligned (91%). Conclusion Findings indicate variability in how reviewers use the confidential comments to editor section in online peer-review systems, though generally the way they use them suggests integrity and transparency to authors.
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Affiliation(s)
- Bridget C. O’Brien
- Department of Medicine and Office of Medical Education, University of California San Francisco, San Francisco, California, United States of America
- * E-mail: j
| | - Anthony R. Artino
- Department of Health, Human Function, and Rehabilitation Sciences, the George Washington University School of Medicine and Health Sciences, Washington, DC, United States of America
| | - Joseph A. Costello
- Department of Medicine, Uniformed Services University of the Health Sciences in Bethesda, Bethesda, Maryland, United States of America
| | - Erik Driessen
- Department of Educational Development and Research, School of Health Profession Research, Maastricht University, Maastricht, the Netherlands
| | - Lauren A. Maggio
- Department of Medicine, Uniformed Services University of the Health Sciences in Bethesda, Bethesda, Maryland, United States of America
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Brock TCM, Elliott KC, Gladbach A, Moermond C, Romeis J, Seiler T, Solomon K, Peter Dohmen G. Open Science in regulatory environmental risk assessment. INTEGRATED ENVIRONMENTAL ASSESSMENT AND MANAGEMENT 2021; 17:1229-1242. [PMID: 33913617 PMCID: PMC8596791 DOI: 10.1002/ieam.4433] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Revised: 02/22/2021] [Accepted: 04/16/2021] [Indexed: 05/14/2023]
Abstract
A possible way to alleviate the public skepticism toward regulatory science is to increase transparency by making all data and value judgments used in regulatory decision making accessible for public interpretation, ideally early on in the process, and following the concepts of Open Science. This paper discusses the opportunities and challenges in strengthening Open Science initiatives in regulatory environmental risk assessment (ERA). In this discussion paper, we argue that the benefits associated with Open Science in regulatory ERA far outweigh its perceived risks. All stakeholders involved in regulatory ERA (e.g., governmental regulatory authorities, private sector, academia, and nongovernmental organizations), as well as professional organizations like the Society of Environmental Toxicology and Chemistry, can play a key role in supporting the Open Science initiative, by promoting the use of recommended reporting criteria for reliability and relevance of data and tools used in ERA, and by developing a communication strategy for both professionals and nonprofessionals to transparently explain the socioeconomic value judgments and scientific principles underlying regulatory ERA. Integr Environ Assess Manag 2021;17:1229-1242. © 2021 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental Toxicology & Chemistry (SETAC).
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Affiliation(s)
| | - Kevin C. Elliott
- Department of Fisheries and WildlifeLyman Briggs College Department of PhilosophyMichigan State UniversityEast LansingMichiganUSA
- Department of PhilosophyLyman Briggs CollegeMichigan State UniversityEast LansingMichiganUSA
| | | | - Caroline Moermond
- National Institute for Public Health and the Environment (RIVM)UtrechtThe Netherlands
| | - Jörg Romeis
- Research Division Agroecology and EnvironmentAgroscopeZurichSwitzerland
| | - Thomas‐Benjamin Seiler
- Hygiene‐Institut des RuhrgebietsGelsenkirchenGermany
- Institute for Environmental ResearchRWTH Aachen UniversityAachenGermany
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Fox CW. Which peer reviewers voluntarily reveal their identity to authors? Insights into the consequences of open-identities peer review. Proc Biol Sci 2021; 288:20211399. [PMID: 34702079 PMCID: PMC8548798 DOI: 10.1098/rspb.2021.1399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Accepted: 09/29/2021] [Indexed: 11/12/2022] Open
Abstract
Identifying reviewers is argued to improve the quality and fairness of peer review, but is generally disfavoured by reviewers. To gain some insight into the factors that influence when reviewers are willing to have their identity revealed, I examined which reviewers voluntarily reveal their identities to authors at the journal Functional Ecology, at which reviewer identities are confidential unless reviewers sign their comments to authors. I found that 5.6% of reviewers signed their comments to authors. This proportion increased slightly over time, from 4.4% in 2003-2005 to 6.7% in 2013-2015. Male reviewers were 1.8 times more likely to sign their comments to authors than were female reviewers, and this difference persisted over time. Few reviewers signed all of their reviews; reviewers were more likely to sign their reviews when their rating of the manuscript was more positive, and papers that had at least one signed review were more likely to be invited for revision. Signed reviews were, on average, longer and recommended more references to authors. My analyses cannot distinguish cause and effect for the patterns observed, but my results suggest that 'open-identities' review, in which reviewers are not permitted to be anonymous, will probably reduce the degree to which reviewers are critical in their assessment of manuscripts and will differentially affect recruitment of male and female reviewers, negatively affecting the diversity of reviewers recruited by journals.
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Affiliation(s)
- Charles W. Fox
- Department of Entomology, University of Kentucky, Lexington KY, USA
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Mahmić-Kaknjo M, Utrobičić A, Marušić A. Motivations for performing scholarly prepublication peer review: A scoping review. Account Res 2021; 28:297-329. [PMID: 32907396 DOI: 10.1080/08989621.2020.1822170] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
Prepublication peer review is a cornerstone of science. Overburdened reviewers invest millions of hours in this voluntary activity. In this scoping review, we aimed at identifying motivations for performing prepublication peer review of scholarly manuscripts. Original research studies investigating actual peer reviewers' motivations were included. We excluded modeling studies, studies related to other types of peer review, guidelines, peer review processes in particular journals. Medline, WoS, and Scopus were searched in February 2016, with no language or time limitations, and the search was updated in July 2019. The search yielded 5,250 records, and 382 were chosen for full text analysis, out of which 10 were appropriate for synthesis. Reference snowballing identified one eligible study. Eleven studies were appropriate for synthesis: four qualitative, four mixed qualitative/quantitative, and three qualitative studies, published from 1998 to 2018, involving 6,667 respondents. Major internal incentive was "communal obligations and reciprocity." Major external incentives were "career advancement," "being recognized as an expert," and "building relationships with journals and editors." Major disincentive was the "lack of time." Editors could incentivize peer review process by choosing highest quality articles, improving communication with peer reviewers, in order to make the process of peer review as short and efficient as possible. The gaps in research concern disincentives to review.
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Affiliation(s)
- Mersiha Mahmić-Kaknjo
- Department of Clinical Pharmacology, Cantonal Hospital, Zenica, Bosnia and Herzegovina
- Faculty of Medicine, University of Zenica, Zenica, Bosnia and Herzegovina
| | - Ana Utrobičić
- Cochrane Croatia, University of Split School of Medicine, Split, Croatia
- Central Medical Library, University of Split School of Medicine, Split, Croatia
| | - Ana Marušić
- Cochrane Croatia, University of Split School of Medicine, Split, Croatia
- Department of Research in Biomedicine and Health, University of Split School of Medicine, Split, Croatia
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Baždarić K, Vrkić I, Arh E, Mavrinac M, Gligora Marković M, Bilić-Zulle L, Stojanovski J, Malički M. Attitudes and practices of open data, preprinting, and peer-review-A cross sectional study on Croatian scientists. PLoS One 2021; 16:e0244529. [PMID: 34153041 PMCID: PMC8216536 DOI: 10.1371/journal.pone.0244529] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 05/10/2021] [Indexed: 11/30/2022] Open
Abstract
Attitudes towards open peer review, open data and use of preprints influence scientists’ engagement with those practices. Yet there is a lack of validated questionnaires that measure these attitudes. The goal of our study was to construct and validate such a questionnaire and use it to assess attitudes of Croatian scientists. We first developed a 21-item questionnaire called Attitudes towards Open data sharing, preprinting, and peer-review (ATOPP), which had a reliable four-factor structure, and measured attitudes towards open data, preprint servers, open peer-review and open peer-review in small scientific communities. We then used the ATOPP to explore attitudes of Croatian scientists (n = 541) towards these topics, and to assess the association of their attitudes with their open science practices and demographic information. Overall, Croatian scientists’ attitudes towards these topics were generally neutral, with a median (Md) score of 3.3 out of max 5 on the scale score. We also found no gender (P = 0.995) or field differences (P = 0.523) in their attitudes. However, attitudes of scientist who previously engaged in open peer-review or preprinting were higher than of scientists that did not (Md 3.5 vs. 3.3, P<0.001, and Md 3.6 vs 3.3, P<0.001, respectively). Further research is needed to determine optimal ways of increasing scientists’ attitudes and their open science practices.
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Affiliation(s)
- Ksenija Baždarić
- Department of Medical Informatics, Faculty of Medicine, University of Rijeka, Rijeka, Croatia
- * E-mail:
| | - Iva Vrkić
- Department of Geophysics, Faculty of Science, University of Zagreb, Zagreb, Croatia
| | - Evgenia Arh
- Library, Faculty of Medicine, University of Rijeka, Rijeka, Croatia
| | - Martina Mavrinac
- Department of Medical Informatics, Faculty of Medicine, University of Rijeka, Rijeka, Croatia
| | - Maja Gligora Marković
- Department of Medical Informatics, Faculty of Medicine, University of Rijeka, Rijeka, Croatia
| | - Lidija Bilić-Zulle
- Department of Medical Informatics, Faculty of Medicine, University of Rijeka, Rijeka, Croatia
| | - Jadranka Stojanovski
- Department of Information Sciences, University of Zadar, Zadar, Croatia
- Centre for Scientific Information, The Ruđer Bošković Institute, Zagreb, Croatia
| | - Mario Malički
- Meta-Research Innovation Center at Stanford (METRICS), Stanford University, Stanford, California, United States of America
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Besançon L, Peiffer-Smadja N, Segalas C, Jiang H, Masuzzo P, Smout C, Billy E, Deforet M, Leyrat C. Open science saves lives: lessons from the COVID-19 pandemic. BMC Med Res Methodol 2021; 21:117. [PMID: 34090351 PMCID: PMC8179078 DOI: 10.1186/s12874-021-01304-y] [Citation(s) in RCA: 88] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Accepted: 05/04/2021] [Indexed: 11/10/2022] Open
Abstract
In the last decade Open Science principles have been successfully advocated for and are being slowly adopted in different research communities. In response to the COVID-19 pandemic many publishers and researchers have sped up their adoption of Open Science practices, sometimes embracing them fully and sometimes partially or in a sub-optimal manner. In this article, we express concerns about the violation of some of the Open Science principles and its potential impact on the quality of research output. We provide evidence of the misuses of these principles at different stages of the scientific process. We call for a wider adoption of Open Science practices in the hope that this work will encourage a broader endorsement of Open Science principles and serve as a reminder that science should always be a rigorous process, reliable and transparent, especially in the context of a pandemic where research findings are being translated into practice even more rapidly. We provide all data and scripts at https://osf.io/renxy/ .
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Affiliation(s)
- Lonni Besançon
- Faculty of Information Technology, Monash University, Melbourne, Australia
- Media and Information Technology, Linköping University, Norrköping, Sweden
| | - Nathan Peiffer-Smadja
- Université de Paris, IAME, INSERM, Paris, F-75018 France
- National Institute for Health Research Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, Imperial College London, London, United Kingdom
| | - Corentin Segalas
- Department of Medical Statistics, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Haiting Jiang
- School of Health Policy and Management, Nanjing Medical University, Nanjing, China
| | - Paola Masuzzo
- IGDORE, Institute for Globally Distributed Open Research and Education, Box 1074, Kristinehöjdsgatan 9A, Gothenburg, 412 82 Sweden
| | - Cooper Smout
- IGDORE, Institute for Globally Distributed Open Research and Education, Box 1074, Kristinehöjdsgatan 9A, Gothenburg, 412 82 Sweden
| | | | - Maxime Deforet
- Sorbonne Université, CNRS, Institut de Biologie Paris-Seine (IBPS), Laboratoire Jean Perrin (LJP), Paris, France
| | - Clémence Leyrat
- Department of Medical Statistics, London School of Hygiene and Tropical Medicine, London, United Kingdom
- Inequalities in Cancer Outcomes Network, Department of Non-Communicable Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, United Kingdom
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41
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Tiokhin L, Panchanathan K, Lakens D, Vazire S, Morgan T, Zollman K. Honest signaling in academic publishing. PLoS One 2021; 16:e0246675. [PMID: 33621261 PMCID: PMC7901761 DOI: 10.1371/journal.pone.0246675] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Accepted: 01/22/2021] [Indexed: 11/19/2022] Open
Abstract
Academic journals provide a key quality-control mechanism in science. Yet, information asymmetries and conflicts of interests incentivize scientists to deceive journals about the quality of their research. How can honesty be ensured, despite incentives for deception? Here, we address this question by applying the theory of honest signaling to the publication process. Our models demonstrate that several mechanisms can ensure honest journal submission, including differential benefits, differential costs, and costs to resubmitting rejected papers. Without submission costs, scientists benefit from submitting all papers to high-ranking journals, unless papers can only be submitted a limited number of times. Counterintuitively, our analysis implies that inefficiencies in academic publishing (e.g., arbitrary formatting requirements, long review times) can serve a function by disincentivizing scientists from submitting low-quality work to high-ranking journals. Our models provide simple, powerful tools for understanding how to promote honest paper submission in academic publishing.
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Affiliation(s)
- Leonid Tiokhin
- Department of Industrial Engineering & Innovation Sciences, Human Technology Interaction Group, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - Karthik Panchanathan
- Department of Anthropology, University of Missouri, Columbia, Missouri, United States of America
| | - Daniel Lakens
- Department of Industrial Engineering & Innovation Sciences, Human Technology Interaction Group, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - Simine Vazire
- Melbourne School of Psychological Sciences, University of Melbourne, Melbourne, Victoria, Australia
| | - Thomas Morgan
- School of Human Evolution and Social Change, Arizona State University, Tempe, Arizona, United States of America
- Institute of Human Origins, Arizona State University, Tempe, Arizona, United States of America
| | - Kevin Zollman
- Department of Philosophy, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America
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Käsmann L, Schröder A, Frey B, Fleischmann DF, Gauer T, Ebert N, Hecht M, Krug D, Niyazi M, Mäurer M. Peer review analysis in the field of radiation oncology: results from a web-based survey of the Young DEGRO working group. Strahlenther Onkol 2020; 197:667-673. [PMID: 33337507 PMCID: PMC8292256 DOI: 10.1007/s00066-020-01729-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Accepted: 11/30/2020] [Indexed: 11/25/2022]
Abstract
Purpose To evaluate the reviewing behaviour in the German-speaking countries in order to provide recommendations to increase the attractiveness of reviewing activity in the field of radiation oncology. Methods In November 2019, a survey was conducted by the Young DEGRO working group (jDEGRO) using the online platform “eSurveyCreator”. The questionnaire consisted of 29 items examining a broad range of factors that influence reviewing motivation and performance. Results A total of 281 responses were received. Of these, 154 (55%) were completed and included in the evaluation. The most important factors for journal selection criteria and peer review performance in the field of radiation oncology are the scientific background of the manuscript (85%), reputation of the journal (59%) and a high impact factor (IF; 40%). Reasons for declining an invitation to review include the scientific background of the article (60%), assumed effort (55%) and a low IF (27%). A double-blind review process is preferred by 70% of respondents to a single-blind (16%) or an open review process (14%). If compensation was offered, 59% of participants would review articles more often. Only 12% of the participants have received compensation for their reviewing activities so far. As compensation for the effort of reviewing, 55% of the respondents would prefer free access to the journal’s articles, 45% a discount for their own manuscripts, 40% reduced congress fees and 39% compensation for expenses. Conclusion The scientific content of the manuscript, reputation of the journal and a high IF determine the attractiveness for peer reviewing in the field of radiation oncology. The majority of participants prefer a double-blind peer review process and would conduct more reviews if compensation was available. Free access to journal articles, discounts for publication costs or congress fees, or an expense allowance were identified to increase attractiveness of the review process. Supplementary Information The online version of this article (10.1007/s00066-020-01729-2) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Lukas Käsmann
- Department of Radiation Oncology, LMU University Hospital, Marchioninistraße 15, 81377, Munich, Germany.
- Comprehensive Pneumology Center Munich (CPC-M), Member of the German Center for Lung Research (DZL), Munich, Germany.
- German Cancer Consortium (DKTK), partner site Munich, Munich, Germany.
| | - Annemarie Schröder
- Department of Radiation Oncology, University Hospital Rostock, Rostock, Germany
| | - Benjamin Frey
- Department of Radiation Oncology, Universitätsklinikum Erlangen, Erlangen, Germany
| | - Daniel F Fleischmann
- Department of Radiation Oncology, LMU University Hospital, Marchioninistraße 15, 81377, Munich, Germany
- German Cancer Consortium (DKTK), partner site Munich, Munich, Germany
- German Cancer Research Center (DKFZ), Heidelberg, Germany
| | - Tobias Gauer
- Department of Radiation Oncology, University Hospital Hamburg-Eppendorf, Hamburg, Germany
| | - Nadja Ebert
- German Cancer Research Center (DKFZ), Heidelberg, Germany
- OncoRay-National Center for Radiation Research in Oncology, Medical Faculty and University Hospital Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany
| | - Markus Hecht
- Department of Radiation Oncology, Universitätsklinikum Erlangen, Erlangen, Germany
| | - David Krug
- Department of Radiation Oncology, University Hospital Schleswig-Holstein campus Kiel, Kiel, Germany
| | - Maximilian Niyazi
- Department of Radiation Oncology, LMU University Hospital, Marchioninistraße 15, 81377, Munich, Germany
- Comprehensive Pneumology Center Munich (CPC-M), Member of the German Center for Lung Research (DZL), Munich, Germany
- German Cancer Consortium (DKTK), partner site Munich, Munich, Germany
| | - Matthias Mäurer
- Department of Radiation Oncology, University Hospital Jena, Jena, Germany
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Hamilton DG, Fraser H, Hoekstra R, Fidler F. Journal policies and editors' opinions on peer review. eLife 2020; 9:e62529. [PMID: 33211009 PMCID: PMC7717900 DOI: 10.7554/elife.62529] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2020] [Accepted: 11/18/2020] [Indexed: 12/23/2022] Open
Abstract
Peer review practices differ substantially between journals and disciplines. This study presents the results of a survey of 322 editors of journals in ecology, economics, medicine, physics and psychology. We found that 49% of the journals surveyed checked all manuscripts for plagiarism, that 61% allowed authors to recommend both for and against specific reviewers, and that less than 6% used a form of open peer review. Most journals did not have an official policy on altering reports from reviewers, but 91% of editors identified at least one situation in which it was appropriate for an editor to alter a report. Editors were also asked for their views on five issues related to publication ethics. A majority expressed support for co-reviewing, reviewers requesting access to data, reviewers recommending citations to their work, editors publishing in their own journals, and replication studies. Our results provide a window into what is largely an opaque aspect of the scientific process. We hope the findings will inform the debate about the role and transparency of peer review in scholarly publishing.
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Affiliation(s)
- Daniel G Hamilton
- Interdisciplinary Metaresearch Group, School of BioSciences, University of MelbourneMelbourneAustralia
| | - Hannah Fraser
- Interdisciplinary Metaresearch Group, School of BioSciences, University of MelbourneMelbourneAustralia
| | - Rink Hoekstra
- Department of Educational Sciences, University of GroningenGroningenNetherlands
| | - Fiona Fidler
- Interdisciplinary Metaresearch Group, School of BioSciences, University of MelbourneMelbourneAustralia
- School of Historical and Philosophical Studies, University of MelbourneMelbourneAustralia
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Klebel T, Reichmann S, Polka J, McDowell G, Penfold N, Hindle S, Ross-Hellauer T. Peer review and preprint policies are unclear at most major journals. PLoS One 2020; 15:e0239518. [PMID: 33085678 PMCID: PMC7577440 DOI: 10.1371/journal.pone.0239518] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Accepted: 09/09/2020] [Indexed: 12/04/2022] Open
Abstract
Clear and findable publishing policies are important for authors to choose appropriate journals for publication. We investigated the clarity of policies of 171 major academic journals across disciplines regarding peer review and preprinting. 31.6% of journals surveyed do not provide information on the type of peer review they use. Information on whether preprints can be posted or not is unclear in 39.2% of journals. 58.5% of journals offer no clear information on whether reviewer identities are revealed to authors. Around 75% of journals have no clear policy on co-reviewing, citation of preprints, and publication of reviewer identities. Information regarding practices of open peer review is even more scarce, with <20% of journals providing clear information. Having found a lack of clear information, we conclude by examining the implications this has for researchers (especially early career) and the spread of open research practices.
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Affiliation(s)
| | - Stefan Reichmann
- Institute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria
| | - Jessica Polka
- ASAPbio, San Francisco, California, United States of America
| | - Gary McDowell
- Lightoller LLC, Chicago, Illinois, United States of America
| | - Naomi Penfold
- eLife Sciences Publications Ltd, Cambridge, Cambridgeshire, United Kingdom
| | - Samantha Hindle
- Cold Spring Harbor Laboratory, bioRxiv, Cold Spring Harbor, New York, United States of America
| | - Tony Ross-Hellauer
- Institute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria
- * E-mail:
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45
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Bossu C, Heck T. Special Issue: Engaging with Open Science in Learning and Teaching. EDUCATION FOR INFORMATION 2020. [DOI: 10.3233/efi-200386] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Affiliation(s)
- Carina Bossu
- Institute of Educational Technology, The Open University, Milton Keynes, UK
| | - Tamara Heck
- Information Center for Education, DIPF, Leibniz Institute for Research and Information in Education, Frankfurt a. M., Germany
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Heck T, Peters I, Mazarakis A, Scherp A, Blümel I. Open science practices in higher education: Discussion of survey results from research and teaching staff in Germany. EDUCATION FOR INFORMATION 2020. [DOI: 10.3233/efi-190272] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Aspects of open science and scholarly practices are often discussed with a focus on research and research dissemination processes. There is currently less discussion on open science and its influence on learning and teaching in higher education, and reversely. This paper discusses open science in relation to educational practices and resources and reports on a study to investigate current educational practices from the perspective of open science. We argue that offering students opportunities via open educational practices raises their awareness of future open science goals and teaches them the skills needed to reach those goals. We present online survey results from 210 participants with teaching responsibility at higher education institutions in Germany. While some of them try to establish more open learning and teaching settings, most respondents apply rather traditional ways of learning and teaching. 60% do not use open educational resources – many have not even heard of them – nor do they make their courses open for an online audience. Participants’ priority lies in resource accuracy and quality and we still see a gap between the benefit of open practices and their practicability and applicability. The paper contributes to the general discussion of open practices in higher education by looking at open science practices and their adaptation to the learning and teaching environment. It formulates recommendations for improvements of open practice support and infrastructure.
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Affiliation(s)
- Tamara Heck
- Information Center for Education, DIPF, Leibniz Institute for Research and Information in Education, Frankfurt a. M., Germany
| | - Isabella Peters
- Kiel University and ZBW, Leibniz Information Centre for Economics, Kiel, Germany
| | - Athanasios Mazarakis
- Kiel University and ZBW, Leibniz Information Centre for Economics, Kiel, Germany
| | - Ansgar Scherp
- Computing Science and Mathematics, University of Stirling, Scotland, UK
| | - Ina Blümel
- German National Library of Science and Technology, Hannover University of Applied Sciences and Arts, Hannover, Germany
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Zong Q, Xie Y, Liang J. Does open peer review improve citation count? Evidence from a propensity score matching analysis of PeerJ. Scientometrics 2020. [DOI: 10.1007/s11192-020-03545-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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48
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Besançon L, Rönnberg N, Löwgren J, Tennant JP, Cooper M. Open up: a survey on open and non-anonymized peer reviewing. Res Integr Peer Rev 2020; 5:8. [PMID: 32607252 PMCID: PMC7318523 DOI: 10.1186/s41073-020-00094-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Accepted: 06/02/2020] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Our aim is to highlight the benefits and limitations of open and non-anonymized peer review. Our argument is based on the literature and on responses to a survey on the reviewing process of alt.chi, a more or less open review track within the so-called Computer Human Interaction (CHI) conference, the predominant conference in the field of human-computer interaction. This track currently is the only implementation of an open peer review process in the field of human-computer interaction while, with the recent increase in interest in open scientific practices, open review is now being considered and used in other fields. METHODS We ran an online survey with 30 responses from alt.chi authors and reviewers, collecting quantitative data using multiple-choice questions and Likert scales. Qualitative data were collected using open questions. RESULTS Our main quantitative result is that respondents are more positive to open and non-anonymous reviewing for alt.chi than for other parts of the CHI conference. The qualitative data specifically highlight the benefits of open and transparent academic discussions. The data and scripts are available on https://osf.io/vuw7h/, and the figures and follow-up work on http://tiny.cc/OpenReviews. CONCLUSION While the benefits are quite clear and the system is generally well-liked by alt.chi participants, they remain reluctant to see it used in other venues. This concurs with a number of recent studies that suggest a divergence between support for a more open review process and its practical implementation.
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Affiliation(s)
- Lonni Besançon
- Linköping University, Norrköping, Sweden
- Université Paris Sud, Orsay, France
| | | | | | - Jonathan P. Tennant
- Southern Denmark University Library, Campusvej 55, Odense, 5230 Denmark
- Center for Research and Interdisciplinarity, Universite de Paris, Rue Charles V, Paris, France
- Institute for Globally Distributed Open Research and Education, Ubud, Indonesia
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Thelwall M, Papas ER, Nyakoojo Z, Allen L, Weigert V. Automatically detecting open academic review praise and criticism. ONLINE INFORMATION REVIEW 2020. [DOI: 10.1108/oir-11-2019-0347] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
PurposePeer reviewer evaluations of academic papers are known to be variable in content and overall judgements but are important academic publishing safeguards. This article introduces a sentiment analysis program, PeerJudge, to detect praise and criticism in peer evaluations. It is designed to support editorial management decisions and reviewers in the scholarly publishing process and for grant funding decision workflows. The initial version of PeerJudge is tailored for reviews from F1000Research's open peer review publishing platform.Design/methodology/approachPeerJudge uses a lexical sentiment analysis approach with a human-coded initial sentiment lexicon and machine learning adjustments and additions. It was built with an F1000Research development corpus and evaluated on a different F1000Research test corpus using reviewer ratings.FindingsPeerJudge can predict F1000Research judgements from negative evaluations in reviewers' comments more accurately than baseline approaches, although not from positive reviewer comments, which seem to be largely unrelated to reviewer decisions. Within the F1000Research mode of post-publication peer review, the absence of any detected negative comments is a reliable indicator that an article will be ‘approved’, but the presence of moderately negative comments could lead to either an approved or approved with reservations decision.Originality/valuePeerJudge is the first transparent AI approach to peer review sentiment detection. It may be used to identify anomalous reviews with text potentially not matching judgements for individual checks or systematic bias assessments.
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Horbach SP, Hepkema WM, Halffman W. The Platform for Responsible Editorial Policies: An initiative to foster editorial transparency in scholarly publishing. LEARNED PUBLISHING 2020. [DOI: 10.1002/leap.1312] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Serge P.J.M. Horbach
- Institute for Science in Society Radboud University Nijmegen P.O. Box 9010, 6500 GL, Nijmegen The Netherlands
| | - Wytske M. Hepkema
- Institute for Science in Society Radboud University Nijmegen P.O. Box 9010, 6500 GL, Nijmegen The Netherlands
| | - Willem Halffman
- Institute for Science in Society Radboud University Nijmegen P.O. Box 9010, 6500 GL, Nijmegen The Netherlands
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