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Shi Y, Liu J, Wang RK. High-speed, long-range and wide-field OCT for in vivo 3D imaging of the oral cavity achieved by a 600 kHz swept source laser. BIOMEDICAL OPTICS EXPRESS 2024; 15:4365-4380. [PMID: 39022551 PMCID: PMC11249692 DOI: 10.1364/boe.528287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 06/03/2024] [Accepted: 06/08/2024] [Indexed: 07/20/2024]
Abstract
We report a high-speed, long-range, and wide-field swept-source optical coherence tomography (SS-OCT) system aimed for imaging microstructures and microcirculations in the oral cavity. This system operates at a scan speed of 600 kHz, delivering a wide imaging field of view at 42 × 42 mm2 and a ranging distance of 36 mm. To simultaneously meet the requirements of high speed and long range, it is necessary for the k-clock trigger signal to be generated at its maximum speed, which may induce non-linear phase response in electronic devices due to the excessive k-clock frequency bandwidth, leading to phase errors. To address this challenge, we introduced a concept of electrical dispersion and a global k-clock compensation approach to improve overall performance of the imaging system. Additionally, image distortion in the wide-field imaging mode is also corrected using a method based on distortion vector maps. With this system, we demonstrate comprehensive structural and blood flow imaging of the anterior oral cavity in healthy individuals. The high-speed, long-range, and wide-field SS-OCT system opens new opportunities for comprehensive oral cavity examinations and holds promise as a reliable tool for assessing oral health conditions.
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Affiliation(s)
- Yaping Shi
- Department of Bioengineering, University of Washington, Seattle, WA, USA
| | - Jian Liu
- Department of Bioengineering, University of Washington, Seattle, WA, USA
| | - Ruikang K. Wang
- Department of Bioengineering, University of Washington, Seattle, WA, USA
- Department of Ophthalmology, University of Washington, Seattle, WA, USA
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2
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Xu H, Xia Q, Shu C, Lan J, Wang X, Gao W, Lv S, Lin R, Xie Z, Xiong X, Li F, Zhang J, Gong X. In vivo endoscopic optical coherence elastography based on a miniature probe. BIOMEDICAL OPTICS EXPRESS 2024; 15:4237-4252. [PMID: 39022537 PMCID: PMC11249679 DOI: 10.1364/boe.521154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Revised: 05/21/2024] [Accepted: 05/30/2024] [Indexed: 07/20/2024]
Abstract
Optical coherence elastography (OCE) is a functional extension of optical coherence tomography (OCT). It offers high-resolution elasticity assessment with nanoscale tissue displacement sensitivity and high quantification accuracy, promising to enhance diagnostic precision. However, in vivo endoscopic OCE imaging has not been demonstrated yet, which needs to overcome key challenges related to probe miniaturization, high excitation efficiency and speed. This study presents a novel endoscopic OCE system, achieving the first endoscopic OCE imaging in vivo. The system features the smallest integrated OCE probe with an outer diameter of only 0.9 mm (with a 1.2-mm protective tube during imaging). Utilizing a single 38-MHz high-frequency ultrasound transducer, the system induced rapid deformation in tissues with enhanced excitation efficiency. In phantom studies, the OCE quantification results match well with compression testing results, showing the system's high accuracy. The in vivo imaging of the rat vagina demonstrated the system's capability to detect changes in tissue elasticity continually and distinguish between normal tissue, hematomas, and tissue with increased collagen fibers precisely. This research narrows the gap for the clinical implementation of the endoscopic OCE system, offering the potential for the early diagnosis of intraluminal diseases.
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Affiliation(s)
- Haoxing Xu
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Qingrong Xia
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
- Institute of Medical Imaging, University of South China, Hengyang 421001, China
- Affiliated Nanhua Hospital, University of South China, Hengyang 421002, China
| | - Chengyou Shu
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Jiale Lan
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Xiatian Wang
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Wen Gao
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Shengmiao Lv
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Riqiang Lin
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Zhihua Xie
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xiaohui Xiong
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Fei Li
- Paul C. Lauterbur Research Center for Biomedical Imaging, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, China
| | - Jinke Zhang
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xiaojing Gong
- Research Center for Biomedical Optics and Molecular Imaging, Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
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3
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Hamidi A, Bayhaqi YA, Canbaz F, Navarini AA, Cattin PC, Zam A. Towards phase-sensitive optical coherence tomography in smart laser osteotomy: temperature feedback. Lasers Med Sci 2023; 38:222. [PMID: 37752387 PMCID: PMC10522524 DOI: 10.1007/s10103-023-03886-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2022] [Accepted: 09/17/2023] [Indexed: 09/28/2023]
Abstract
Thermal effects during bone surgery pose a common challenge, whether using mechanical tools or lasers. An irrigation system is a standard solution to cool the tissue and reduce collateral thermal damage. In bone surgery using Er:YAG laser, insufficient irrigation raises the risk of thermal damage, while excessive water lowers ablation efficiency. This study investigated the potential of optical coherence tomography to provide feedback by relating the temperature rise with the photo-thermal expansion of the tissue. A phase-sensitive optical coherence tomography system (central wavelength of λ=1.288 μm, a bandwidth of 60.9 nm and a sweep rate of 104.17 kHz) was integrated with an Er:YAG laser using a custom-made dichromatic mirror. Phase calibration was performed by monitoring the temperature changes (thermal camera) and corresponding cumulative phase changes using the phase-sensitive optical coherence tomography system during laser ablation. In this experiment, we used an Er:YAG laser with 230 mJ per pulse at 10 Hz for ablation. Calibration coefficients were determined by fitting the temperature values to phase later and used to predict the temperature rise for subsequent laser ablations. Following the phase calibration step, we used the acquired values to predict the temperature rise of three different laser-induced cuts with the same parameters of the ablative laser. The average root-mean-square error for the three experiments was measured to be around 4 °C. In addition to single-point prediction, we evaluated this method's performance to predict the tissue's two-dimensional temperature rise during laser osteotomy. The findings suggest that the proposed principle could be used in the future to provide temperature feedback for minimally invasive laser osteotomy.
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Affiliation(s)
- Arsham Hamidi
- Biomedical Laser and Optics Group (BLOG), Department of Biomedical Engineering, University of Basel, CH-4123, Allschwil, Switzerland.
| | - Yakub A Bayhaqi
- Biomedical Laser and Optics Group (BLOG), Department of Biomedical Engineering, University of Basel, CH-4123, Allschwil, Switzerland
| | - Ferda Canbaz
- Biomedical Laser and Optics Group (BLOG), Department of Biomedical Engineering, University of Basel, CH-4123, Allschwil, Switzerland
| | - Alexander A Navarini
- Digital Dermatology, Department of Biomedical Engineering, University of Basel, CH-4123, Allschwil, Switzerland
| | - Philippe C Cattin
- Center for Medical Image Analysis and Navigation (CIAN), Department of Biomedical Engineering, University of Basel, CH-4123, Allschwil, Switzerland
| | - Azhar Zam
- Biomedical Laser and Optics Group (BLOG), Department of Biomedical Engineering, University of Basel, CH-4123, Allschwil, Switzerland
- Division of Engineering, New York University Abu Dhabi, Abu Dhabi, 129188, UAE
- Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA
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4
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Batista A, Serranho P, Santos MJ, Correia C, Domingues JP, Loureiro C, Cardoso J, Barbeiro S, Morgado M, Bernardes R. Phase-Resolved Optical Coherence Elastography: An Insight into Tissue Displacement Estimation. SENSORS (BASEL, SWITZERLAND) 2023; 23:3974. [PMID: 37112314 PMCID: PMC10142248 DOI: 10.3390/s23083974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 04/03/2023] [Accepted: 04/12/2023] [Indexed: 06/19/2023]
Abstract
Robust methods to compute tissue displacements in optical coherence elastography (OCE) data are paramount, as they play a significant role in the accuracy of tissue elastic properties estimation. In this study, the accuracy of different phase estimators was evaluated on simulated OCE data, where the displacements can be accurately set, and on real data. Displacement (∆d) estimates were computed from (i) the original interferogram data (Δφori) and two phase-invariant mathematical manipulations of the interferogram: (ii) its first-order derivative (Δφd) and (iii) its integral (Δφint). We observed a dependence of the phase difference estimation accuracy on the initial depth location of the scatterer and the magnitude of the tissue displacement. However, by combining the three phase-difference estimates (Δdav), the error in phase difference estimation could be minimized. By using Δdav, the median root-mean-square error associated with displacement prediction in simulated OCE data was reduced by 85% and 70% in data with and without noise, respectively, in relation to the traditional estimate. Furthermore, a modest improvement in the minimum detectable displacement in real OCE data was also observed, particularly in data with low signal-to-noise ratios. The feasibility of using Δdav to estimate agarose phantoms' Young's modulus is illustrated.
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Affiliation(s)
- Ana Batista
- Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), Institute for Nuclear Sciences Applied to Health (ICNAS), University of Coimbra, 3000-548 Coimbra, Portugal
- Department of Physics, Faculty of Science and Technology, University of Coimbra, 3004-531 Coimbra, Portugal
| | - Pedro Serranho
- Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), Institute for Nuclear Sciences Applied to Health (ICNAS), University of Coimbra, 3000-548 Coimbra, Portugal
- Department of Science and Technology, Mathematics Section, Aberta University, 1250-100 Lisbon, Portugal
| | - Mário J. Santos
- Department of Electrical and Computer Engineering, Faculty of Science and Technology, University of Coimbra, 3004-531 Coimbra, Portugal
| | - Carlos Correia
- Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), Institute for Nuclear Sciences Applied to Health (ICNAS), University of Coimbra, 3000-548 Coimbra, Portugal
| | - José P. Domingues
- Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), Institute for Nuclear Sciences Applied to Health (ICNAS), University of Coimbra, 3000-548 Coimbra, Portugal
- Department of Physics, Faculty of Science and Technology, University of Coimbra, 3004-531 Coimbra, Portugal
| | - Custódio Loureiro
- Department of Physics, Faculty of Science and Technology, University of Coimbra, 3004-531 Coimbra, Portugal
| | - João Cardoso
- Department of Physics, Faculty of Science and Technology, University of Coimbra, 3004-531 Coimbra, Portugal
| | - Sílvia Barbeiro
- Department of Mathematics, CMUC, University of Coimbra, 3004-531 Coimbra, Portugal
| | - Miguel Morgado
- Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), Institute for Nuclear Sciences Applied to Health (ICNAS), University of Coimbra, 3000-548 Coimbra, Portugal
- Department of Physics, Faculty of Science and Technology, University of Coimbra, 3004-531 Coimbra, Portugal
| | - Rui Bernardes
- Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), Institute for Nuclear Sciences Applied to Health (ICNAS), University of Coimbra, 3000-548 Coimbra, Portugal
- Faculty of Medicine (FMUC), Clinical Academic Center of Coimbra (CACC), University of Coimbra, 3000-143 Coimbra, Portugal
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5
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Samaei S, Nowacka K, Gerega A, Pastuszak Ż, Borycki D. Continuous-wave parallel interferometric near-infrared spectroscopy (CW πNIRS) with a fast two-dimensional camera. BIOMEDICAL OPTICS EXPRESS 2022; 13:5753-5774. [PMID: 36733725 PMCID: PMC9872890 DOI: 10.1364/boe.472643] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Revised: 09/16/2022] [Accepted: 10/01/2022] [Indexed: 06/02/2023]
Abstract
Interferometric near-infrared spectroscopy (iNIRS) is an optical method that noninvasively measures the optical and dynamic properties of the human brain in vivo. However, the original iNIRS technique uses single-mode fibers for light collection, which reduces the detected light throughput. The reduced light throughput is compensated by the relatively long measurement or integration times (∼1 sec), which preclude monitoring of rapid blood flow changes that could be linked to neural activation. Here, we propose parallel interferometric near-infrared spectroscopy (πNIRS) to overcome this limitation. In πNIRS we use multi-mode fibers for light collection and a high-speed, two-dimensional camera for light detection. Each camera pixel acts effectively as a single iNIRS channel. So, the processed signals from each pixel are spatially averaged to reduce the overall integration time. Moreover, interferometric detection provides us with the unique capability of accessing complex information (amplitude and phase) about the light remitted from the sample, which with more than 8000 parallel channels, enabled us to sense the cerebral blood flow with only a 10 msec integration time (∼100x faster than conventional iNIRS). In this report, we have described the theoretical foundations and possible ways to implement πNIRS. Then, we developed a prototype continuous wave (CW) πNIRS system and validated it in liquid phantoms. We used our CW πNIRS to monitor the pulsatile blood flow in a human forearm in vivo. Finally, we demonstrated that CW πNIRS could monitor activation of the prefrontal cortex by recording the change in blood flow in the forehead of the subject while he was reading an unknown text.
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Affiliation(s)
- Saeed Samaei
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Ks. Trojdena 4, 02-109, Warsaw, Poland
| | - Klaudia Nowacka
- International Centre for Translational Eye Research, Skierniewicka 10A, 01-230 Warsaw, Poland
| | - Anna Gerega
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Ks. Trojdena 4, 02-109, Warsaw, Poland
| | - Żanna Pastuszak
- Department of Neurosurgery, Mossakowski Medical Research Center Polish Academy of Sciences, Pawińskiego 5, 02-106 Warsaw, Poland
| | - Dawid Borycki
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
- International Centre for Translational Eye Research, Skierniewicka 10A, 01-230 Warsaw, Poland
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6
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Singh M, Zvietcovich F, Larin KV. Introduction to optical coherence elastography: tutorial. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2022; 39:418-430. [PMID: 35297425 PMCID: PMC10052825 DOI: 10.1364/josaa.444808] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2021] [Accepted: 01/25/2022] [Indexed: 06/03/2023]
Abstract
Optical coherence elastography (OCE) has seen rapid growth since its introduction in 1998. The past few decades have seen tremendous advancements in the development of OCE technology and a wide range of applications, including the first clinical applications. This tutorial introduces the basics of solid mechanics, which form the foundation of all elastography methods. We then describe how OCE measurements of tissue motion can be used to quantify tissue biomechanical parameters. We also detail various types of excitation methods, imaging systems, acquisition schemes, and data processing algorithms and how various parameters associated with each step of OCE imaging can affect the final quantitation of biomechanical properties. Finally, we discuss the future of OCE, its potential, and the next steps required for OCE to become an established medical imaging technology.
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Affiliation(s)
- Manmohan Singh
- Biomedical Engineering, University of Houston, Houston, Texas 77204, USA
| | - Fernando Zvietcovich
- Biomedical Engineering, University of Houston, Houston, Texas 77204, USA
- Department of Engineering, Pontificia Universidad Catolica del Peru, San Miguel, Lima 15088, Peru
| | - Kirill V. Larin
- Biomedical Engineering, University of Houston, Houston, Texas 77204, USA
- Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, Texas 77030, USA
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7
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Zvietcovich F, Larin KV. Wave-based optical coherence elastography: The 10-year perspective. PROGRESS IN BIOMEDICAL ENGINEERING (BRISTOL, ENGLAND) 2022; 4:012007. [PMID: 35187403 PMCID: PMC8856668 DOI: 10.1088/2516-1091/ac4512] [Citation(s) in RCA: 34] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
After 10 years of progress and innovation, optical coherence elastography (OCE) based on the propagation of mechanical waves has become one of the major and the most studied OCE branches, producing a fundamental impact in the quantitative and nondestructive biomechanical characterization of tissues. Preceding previous progress made in ultrasound and magnetic resonance elastography; wave-based OCE has pushed to the limit the advance of three major pillars: (1) implementation of novel wave excitation methods in tissues, (2) understanding new types of mechanical waves in complex boundary conditions by proposing advance analytical and numerical models, and (3) the development of novel estimators capable of retrieving quantitative 2D/3D biomechanical information of tissues. This remarkable progress promoted a major advance in answering basic science questions and the improvement of medical disease diagnosis and treatment monitoring in several types of tissues leading, ultimately, to the first attempts of clinical trials and translational research aiming to have wave-based OCE working in clinical environments. This paper summarizes the fundamental up-to-date principles and categories of wave-based OCE, revises the timeline and the state-of-the-art techniques and applications lying in those categories, and concludes with a discussion on the current challenges and future directions, including clinical translation research.
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Affiliation(s)
- Fernando Zvietcovich
- University of Houston, Biomedical Engineering, Houston, TX, United States, 77204
| | - Kirill V. Larin
- University of Houston, Biomedical Engineering, Houston, TX, United States, 77204,
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8
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Desissaire S, Schwarzhans F, Steiner S, Vass C, Fischer G, Pircher M, Hitzenberger CK. Temporal phase evolution OCT for measurement of tissue deformation in the human retina in-vivo. BIOMEDICAL OPTICS EXPRESS 2021; 12:7092-7112. [PMID: 34858702 PMCID: PMC8606136 DOI: 10.1364/boe.440893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 10/13/2021] [Accepted: 10/13/2021] [Indexed: 05/08/2023]
Abstract
We demonstrate the use of temporal phase evolution (TPE-) OCT methods to evaluate retinal tissue deformation in-vivo over time periods of several seconds. A custom built spectral domain (SD)-OCT system with an integrated retinal tracker, ensuring stable imaging with sub-speckle precision, was used for imaging. TPE-OCT measures and images phase differences between an initial reference B-scan and each of the subsequent B-scans of the evaluated temporal sequence. In order to demonstrate the precision and repeatability of the measurements, retinal nerve fiber (RNF) tissue deformations induced by retinal vessels pulsating with the heartbeat were analyzed in several healthy subjects. We show TPE maps (M-scans of phase evolution as a function of position along B-scan trace vs. time) of wrapped phase data and corresponding deformation maps in selected regions of the RNF layer (RNFL) over the course of several cardiac cycles. A reproducible phase pattern is seen at each heartbeat cycle for all imaged volunteers. RNF tissue deformations near arteries and veins up to ∼ 1.6 µm were obtained with an average precision for a single pixel of about 30 nm. Differences of motion induced by arteries and veins are also investigated.
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Affiliation(s)
- Sylvia Desissaire
- Center for Medical Physics and Biomedical
Engineering, Medical University of Vienna,
Vienna, 1090, Austria
| | - Florian Schwarzhans
- Center for Medical Statistics, Informatics
and Intelligent Systems, Medical University of
Vienna, Vienna, 1090, Austria
| | - Stefan Steiner
- Department of Ophthalmology and Optometry,
Medical University of Vienna, Vienna, 1090,
Austria
| | - Clemens Vass
- Department of Ophthalmology and Optometry,
Medical University of Vienna, Vienna, 1090,
Austria
| | - Georg Fischer
- Center for Medical Statistics, Informatics
and Intelligent Systems, Medical University of
Vienna, Vienna, 1090, Austria
| | - Michael Pircher
- Center for Medical Physics and Biomedical
Engineering, Medical University of Vienna,
Vienna, 1090, Austria
| | - Christoph K. Hitzenberger
- Center for Medical Physics and Biomedical
Engineering, Medical University of Vienna,
Vienna, 1090, Austria
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9
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Wei S, Kang JU. Stabilizing the phase of swept-source optical coherence tomography by a wrapped Gaussian mixture model. OPTICS LETTERS 2021; 46:2932-2935. [PMID: 34129577 PMCID: PMC9808914 DOI: 10.1364/ol.420898] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Accepted: 05/20/2021] [Indexed: 06/12/2023]
Abstract
The phase of an optical coherence tomography (OCT) signal carries critical information about particle micro-displacements. However, swept-source OCT (SSOCT) suffers from phase instability problems due to trigger jitters from the swept source. In this Letter, a wrapped Gaussian mixture model (WGMM) is proposed to stabilize the phase of SSOCT systems. A closed-form iteration solution of the WGMM is derived using the expectation-maximization algorithm. Necessary approximations are made for real-time graphic processing unit implementation. The performance of the proposed method is demonstrated through ex vivo, in vivo, and flow phantom experiments. The results show the robustness of the method in different application scenarios.
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10
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Liu X, Jiang L, Ke M, Schmetterer L, Barathi VA. Using image data to numerically correct the jitter in polarization depth encoding PS-OCT. OPTICS LETTERS 2021; 46:1692-1695. [PMID: 33793520 DOI: 10.1364/ol.420029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Accepted: 03/06/2021] [Indexed: 06/12/2023]
Abstract
In swept source polarization depth encoding polarization sensitive optical coherence tomography (PS-OCT), the laser jitter induces additional noise to the polarization sensitive measurement. In this Letter, we developed a numerical algorithm to correct the jitter phases based on the image data using the Mueller matrix calculus. The algorithm was demonstrated on in vivo retina imaging of a guinea pig with a custom-built PS-OCT system. The performance of the proposed algorithm was almost comparable to the conventional method of using a physical calibration signal. By not requiring a hardware generated calibration signal and k-clock, the proposed algorithm is useful to reduce the complexity and the cost of a polarization depth encoding PS-OCT system.
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11
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Wei X, Hormel TT, Jia Y. Phase-stabilized complex-decorrelation angiography. BIOMEDICAL OPTICS EXPRESS 2021; 12:2419-2431. [PMID: 33996238 PMCID: PMC8086438 DOI: 10.1364/boe.420503] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Revised: 03/20/2021] [Accepted: 03/23/2021] [Indexed: 06/12/2023]
Abstract
In this study, we developed a novel phase-stabilized complex-decorrelation (PSCD) optical coherence tomography (OCT) angiography (OCTA) method that can generate high quality OCTA images. This method has been validated using three different types of OCT systems and compared with conventional complex- and amplitude-based OCTA algorithms. Our results suggest that in combination with a pre-processing phase stabilization method, the PSCD method is insensitive to bulk motion phase shifts, less dependent on OCT reflectance than conventional complex methods and demonstrates extended dynamic range of flow signal, in contrast to other two methods.
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Affiliation(s)
- Xiang Wei
- Casey Eye Institute, Oregon Health and Science University, Portland, Oregon 97239, USA
- Department of Biomedical Engineer, Oregon Health and Science University, Portland, Oregon 97239, USA
| | - Tristan T. Hormel
- Casey Eye Institute, Oregon Health and Science University, Portland, Oregon 97239, USA
| | - Yali Jia
- Casey Eye Institute, Oregon Health and Science University, Portland, Oregon 97239, USA
- Department of Biomedical Engineer, Oregon Health and Science University, Portland, Oregon 97239, USA
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12
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Sato M, Masuta J, Nishidate I. Differential phase imaging in full-field optical coherence microscopy using a short multimode fiber probe. APPLIED OPTICS 2020; 59:10512-10522. [PMID: 33361986 DOI: 10.1364/ao.405226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Accepted: 10/27/2020] [Indexed: 06/12/2023]
Abstract
We demonstrate phase imaging that reduces the common phase noise in full-field optical coherence microscopy using a short multimode fiber (SMMF) probe. Using a cover glass, phase images of the SMMF and sample surfaces were measured simultaneously. Subtracting the phase of the SMMF surface as a reference, the phase drifts in the sample region are reduced. The axial and lateral resolutions were 2.3 µm and <4.4µm, respectively. The standard deviation of the time variation in the phase decreased from 14.3 deg to 9.2 deg and was reduced by 64% when in contact with the polymer film at the SMMF. In quantitative evaluations, the measured phases closely correspond to the phases changed by a piezoelectric device.
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13
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Huang Y, Jerwick J, Liu G, Zhou C. Full-range space-division multiplexing optical coherence tomography angiography. BIOMEDICAL OPTICS EXPRESS 2020; 11:4817-4834. [PMID: 32923080 PMCID: PMC7449723 DOI: 10.1364/boe.400162] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Revised: 07/20/2020] [Accepted: 07/26/2020] [Indexed: 06/11/2023]
Abstract
In this study, we demonstrated a full-range space-division multiplexing optical coherence tomography (FR-SDM-OCT) system. Utilizing the galvanometer-based phase modulation full-range technique, the total imaging range of FR-SDM-OCT can be extended to >20 mm in tissue, with a digitizer sampling rate of 500 MS/s and a laser sweeping rate of 100 kHz. Complex conjugate terms were suppressed in FR-SDM-OCT images with a measured rejection ratio of up to ∼46 dB at ∼1.4 mm depth and ∼30 dB at ∼19.4 mm depth. The feasibility of FR-SDM-OCT was validated by imaging Scotch tapes and human fingernails. Furthermore, we demonstrated the feasibility of FR-SDM-OCT angiography (FR-SDM-OCTA) to perform simultaneous acquisition of human fingernail angiograms from four positions, with a total field-of-view of ∼1.7 mm × ∼7.5 mm. Employing the full-range technique in SDM-OCT can effectively alleviate hardware requirements to achieve the long depth measurement range, which is required by SDM-OCT to separate multiple images at different sample locations. FR-SDM-OCTA creates new opportunities to apply SDM-OCT to obtain wide-field angiography of in vivo tissue samples free of labeling.
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Affiliation(s)
- Yongyang Huang
- Department of Electrical and Computer Engineering, Lehigh University, 19 Memorial Drive West, Bethlehem, PA 18015, USA
| | - Jason Jerwick
- Department of Electrical and Computer Engineering, Lehigh University, 19 Memorial Drive West, Bethlehem, PA 18015, USA
- Department of Biomedical Engineering, Washington University in St Louis, St Louis, MO 63130, USA
| | - Guoyan Liu
- Department of Electrical and Computer Engineering, Lehigh University, 19 Memorial Drive West, Bethlehem, PA 18015, USA
- Department of Dermatology, Affiliated Hospital of Weifang Medical University, Weifang, 261031, China
| | - Chao Zhou
- Department of Electrical and Computer Engineering, Lehigh University, 19 Memorial Drive West, Bethlehem, PA 18015, USA
- Department of Biomedical Engineering, Washington University in St Louis, St Louis, MO 63130, USA
- Department of Bioengineering, Lehigh University, Bethlehem, PA 18015, USA
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14
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Li Y, Moon S, Chen JJ, Zhu Z, Chen Z. Ultrahigh-sensitive optical coherence elastography. LIGHT, SCIENCE & APPLICATIONS 2020; 9:58. [PMID: 32337022 PMCID: PMC7154028 DOI: 10.1038/s41377-020-0297-9] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Revised: 03/16/2020] [Accepted: 03/19/2020] [Indexed: 05/07/2023]
Abstract
The phase stability of an optical coherence elastography (OCE) system is the key determining factor for achieving a precise elasticity measurement, and it can be affected by the signal-to-noise ratio (SNR), timing jitters in the signal acquisition process, and fluctuations in the optical path difference (OPD) between the sample and reference arms. In this study, we developed an OCE system based on swept-source optical coherence tomography (SS-OCT) with a common-path configuration (SS-OCECP). Our system has a phase stability of 4.2 mrad without external stabilization or extensive post-processing, such as averaging. This phase stability allows us to detect a displacement as small as ~300 pm. A common-path interferometer was incorporated by integrating a 3-mm wedged window into the SS-OCT system to provide intrinsic compensation for polarization and dispersion mismatch, as well as to minimize phase fluctuations caused by the OPD variation. The wedged window generates two reference signals that produce two OCT images, allowing for averaging to improve the SNR. Furthermore, the electrical components are optimized to minimize the timing jitters and prevent edge collisions by adjusting the delays between the trigger, k-clock, and signal, utilizing a high-speed waveform digitizer, and incorporating a high-bandwidth balanced photodetector. We validated the SS-OCECP performance in a tissue-mimicking phantom and an in vivo rabbit model, and the results demonstrated a significantly improved phase stability compared to that of the conventional SS-OCE. To the best of our knowledge, we demonstrated the first SS-OCECP system, which possesses high-phase stability and can be utilized to significantly improve the sensitivity of elastography.
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Affiliation(s)
- Yan Li
- Beckman Laser Institute, University of California, Irvine, Irvine, CA 92612 USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92617 USA
| | - Sucbei Moon
- Beckman Laser Institute, University of California, Irvine, Irvine, CA 92612 USA
- Department of Physics, Kookmin University, Seoul, 02707 South Korea
| | - Jason J. Chen
- Beckman Laser Institute, University of California, Irvine, Irvine, CA 92612 USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92617 USA
| | - Zhikai Zhu
- Beckman Laser Institute, University of California, Irvine, Irvine, CA 92612 USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92617 USA
| | - Zhongping Chen
- Beckman Laser Institute, University of California, Irvine, Irvine, CA 92612 USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92617 USA
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15
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Jin Z, Khazaeinezhad R, Zhu J, Yu J, Qu Y, He Y, Li Y, Gomez Alvarez-Arenas TE, Lu F, Chen Z. In-vivo 3D corneal elasticity using air-coupled ultrasound optical coherence elastography. BIOMEDICAL OPTICS EXPRESS 2019; 10:6272-6285. [PMID: 31853399 PMCID: PMC6913398 DOI: 10.1364/boe.10.006272] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Revised: 10/03/2019] [Accepted: 10/10/2019] [Indexed: 05/03/2023]
Abstract
Corneal elasticity can resist elastic deformations under intraocular pressure to maintain normal corneal shape, which has a great influence on corneal refractive function. Elastography can measure tissue elasticity and provide a powerful tool for clinical diagnosis. Air-coupled ultrasound optical coherence elastography (OCE) has been used in the quantification of ex-vivo corneal elasticity. However, in-vivo imaging of the cornea remains a challenge. The 3D air-coupled ultrasound OCE with an axial motion artifacts correction algorithm was developed to distinguish the in-vivo cornea vibration from the axial eye motion in anesthetized rabbits and visualize the elastic wave propagation clearly. The elastic wave group velocity of in-vivo rabbit cornea was measured to be 5.96 ± 0.55 m/s, which agrees with other studies. The results show the potential of 3D air-coupled ultrasound OCE with an axial motion artifacts correction algorithm for quantitative in-vivo assessment of corneal elasticity.
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Affiliation(s)
- Zi Jin
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
- School of Ophthalmology and Optometry, Wenzhou Medical University, Wenzhou 325003, Zhejiang, China
- These authors contributed equally to this work
| | - Reza Khazaeinezhad
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
- These authors contributed equally to this work
| | - Jiang Zhu
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
| | - Junxiao Yu
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
| | - Yueqiao Qu
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
| | - Youmin He
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
| | - Yan Li
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
| | - Tomas E Gomez Alvarez-Arenas
- Institute of Physical and Information Technologies, Spanish National Research Council (CSIC), 28006 Madrid, Spain
| | - Fan Lu
- School of Ophthalmology and Optometry, Wenzhou Medical University, Wenzhou 325003, Zhejiang, China
| | - Zhongping Chen
- Beckman Laser Institute, Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92612, USA
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16
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Li Y, Chen J, Chen Z. Advances in Doppler optical coherence tomography and angiography. TRANSLATIONAL BIOPHOTONICS 2019; 1:e201900005. [PMID: 33005888 PMCID: PMC7523705 DOI: 10.1002/tbio.201900005] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Accepted: 11/14/2019] [Indexed: 12/22/2022] Open
Abstract
Since the first demonstration of Doppler optical coherence tomography (OCT) in 1997, several functional extensions of Doppler OCT have been developed, including velocimetry, angiogram, and optical coherence elastography. These functional techniques have been widely used in research and clinical applications, particularly in ophthalmology. Here, we review the principles, representative methods, and applications of different Doppler OCT techniques, followed by discussion on the innovations, limitations, and future directions of each of these techniques.
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Affiliation(s)
- Yan Li
- Beckman Laser Institute, University of California, Irvine, California
- Department of Biomedical Engineering, University of California, Irvine, California
| | - Jason Chen
- Beckman Laser Institute, University of California, Irvine, California
- Department of Biomedical Engineering, University of California, Irvine, California
| | - Zhongping Chen
- Beckman Laser Institute, University of California, Irvine, California
- Department of Biomedical Engineering, University of California, Irvine, California
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17
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MOON SUCBEI, MIAO YUSI, CHEN ZHONGPING. Fiber-based polarization-sensitive optical coherence tomography of a minimalistic system configuration. OPTICS LETTERS 2019; 44:3150-3153. [PMID: 31199403 PMCID: PMC6922310 DOI: 10.1364/ol.44.003150] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Accepted: 05/13/2019] [Indexed: 05/19/2023]
Abstract
We present a very simple method of constructing a polarization-sensitive optical coherence tomography (PS-OCT) system. An ordinary fiber-based swept-source OCT system was reconfigured for PS-OCT by adding a long section of polarization-maintaining fiber in the sample arm. Two polarization modes of a large group-delay difference formed spatially distinguished polarization channels. The depth-encoded information on the polarization states was retrieved by an amplitude-based analysis. We found that our method provides an economic scheme of PS-OCT. It demonstrates that an ordinary OCT system can be easily reconfigured for PS-OCT imaging if it has sufficient margins in the imaging range.
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Affiliation(s)
- SUCBEI MOON
- Beckman Laser Institute, University of California, Irvine, Irvine, California 92612, USA
- Department of Physics, Kookmin University, Seoul 02707, South Korea
| | - YUSI MIAO
- Beckman Laser Institute, University of California, Irvine, Irvine, California 92612, USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92697, USA
| | - ZHONGPING CHEN
- Beckman Laser Institute, University of California, Irvine, Irvine, California 92612, USA
- Department of Biomedical Engineering, University of California, Irvine, Irvine, California 92697, USA
- Corresponding author:
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18
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Yamanari M, Uematsu S, Ishihara K, Ikuno Y. Parallel detection of Jones-matrix elements in polarization-sensitive optical coherence tomography. BIOMEDICAL OPTICS EXPRESS 2019; 10:2318-2336. [PMID: 31149375 PMCID: PMC6524579 DOI: 10.1364/boe.10.002318] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Revised: 03/16/2019] [Accepted: 03/18/2019] [Indexed: 06/09/2023]
Abstract
The polarization properties of a sample can be characterized using a Jones matrix. To measure the Jones matrix without assumptions of the sample, two different incident states of polarization are usually used. This requirement often causes certain drawbacks in polarization-sensitive optical coherence tomography (PS-OCT), e.g., a decrease in the effective A-scan rate or axial depth range, if a multiplexing scheme is used. Because both the A-scan rate and axial depth range are important for clinical applications, including the imaging of an anterior eye segment, a new PS-OCT method that does not have these drawbacks is desired. Here, we present a parallel-detection approach that maintains the same A-scan rate and axial measurement range as conventional OCT. The interferometer consists of fiber-optic components, most of which are polarization-maintaining components with fast-axis blocking free from polarization management. When a parallel detection is implemented using swept-source OCT (SS-OCT), synchronization between the A-scans and synchronization between the detection channels have critical effects on the Jones-matrix measurement. Because it is difficult to achieve perfect synchronization using only hardware, we developed a solution using a numerical correction with signals from a static mirror. Using the developed system, we demonstrate the imaging of an anterior eye segment from the cornea to the back surface of the crystalline lens.
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Affiliation(s)
- Masahiro Yamanari
- Engineering Department, Tomey Corporation, 2-11-33 Noritakeshinmachi, Nishiku, Nagoya, Aichi, 451-0051, Japan
| | - Sato Uematsu
- Department of Ophthalmology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan
| | - Kenji Ishihara
- Engineering Department, Tomey Corporation, 2-11-33 Noritakeshinmachi, Nishiku, Nagoya, Aichi, 451-0051, Japan
| | - Yasushi Ikuno
- Ikuno Eye Center, 2-9-10 3F Juso-Higashi, Yodogawaku, Osaka, Osaka, 532-0023, Japan
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19
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Ling Y, Meiniel W, Singh-Moon R, Angelini E, Olivo-Marin JC, Hendon CP. Compressed sensing-enabled phase-sensitive swept-source optical coherence tomography. OPTICS EXPRESS 2019; 27:855-871. [PMID: 30696165 PMCID: PMC6410915 DOI: 10.1364/oe.27.000855] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2018] [Revised: 11/30/2018] [Accepted: 12/21/2018] [Indexed: 05/21/2023]
Abstract
Here we present a novel phase-sensitive swept-source optical coherence tomography (PhS-SS-OCT) system. The simultaneously recorded calibration signal, which is commonly used in SS-OCT to stabilize the phase, is randomly sub-sampled during the acquisition, and it is later reconstructed based on the Compressed Sensing (CS) theory. We first mathematically investigated the method, and verified it through computer simulations. We then conducted a vibrational frequency test and a flow velocity measurement in phantoms to demonstrate the system's capability of handling phase-sensitive tasks. The proposed scheme shows excellent phase stability with greatly discounted data bandwidth compared with conventional procedures. We further showcased the usefulness of the system in biological samples by detecting the blood flow in ex vivo swine left marginal artery. The proposed system is compatible with most of the existing SS-OCT systems and could be a preferred solution for future high-speed phase-sensitive applications.
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Affiliation(s)
- Yuye Ling
- Department of Electrical Engineering, Columbia University, 500 W 120th St., New York, New York 10027,
USA
| | - William Meiniel
- Institut Mines-Telecom, Telecom-ParisTech, CNRS LTCI, Paris,
France
- Institut Pasteur, BioImage Analysis unit, CNRS UMR 3691, Paris,
France
| | - Rajinder Singh-Moon
- Department of Electrical Engineering, Columbia University, 500 W 120th St., New York, New York 10027,
USA
| | - Elsa Angelini
- Institut Mines-Telecom, Telecom-ParisTech, CNRS LTCI, Paris,
France
- NIHR Imperial BRC, ITMAT Data Science Group, Imperial College, London,
United Kingdom
- Department of Biomedical Engineering, Columbia University, 500 W 120th St., New York, New York 10027,
USA
| | | | - Christine P. Hendon
- Department of Electrical Engineering, Columbia University, 500 W 120th St., New York, New York 10027,
USA
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