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Lengenfelder B, Mehari F, Hohmann M, Löhr C, Waldner MJ, Schmidt M, Zalevsky Z, Klämpfl F. Contact-free endoscopic photoacoustic sensing using speckle analysis. JOURNAL OF BIOPHOTONICS 2019; 12:e201900130. [PMID: 31468729 PMCID: PMC7065617 DOI: 10.1002/jbio.201900130] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Revised: 07/04/2019] [Accepted: 08/20/2019] [Indexed: 05/17/2023]
Abstract
Photoacoustic endoscopy (PAE) is an emerging imaging modality, which offers a high imaging penetration and a high optical contrast in soft tissue. Most of the developed endoscopic photoacoustic sensing systems use miniaturized contact ultrasound transducers or complex optical approaches. In this work, a new fiber-based detection technique using speckle analysis for contact-free signal detection is presented. Phantom and ex vivo experiments are performed in transmission and reflection mode for proof of concept. In summary, the potential of the technique for endoscopic photoacoustic signal detection is demonstrated. The new technique might help in future to broaden the applications of PAE in imaging or guiding minimally invasive laser procedures.
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Affiliation(s)
- Benjamin Lengenfelder
- Department of Mechanical Engineering, Friedrich‐Alexander‐Universität Erlangen‐Nürnberg (FAU)Institute of Photonic Technologies (LPT)ErlangenGermany
- Erlangen Graduate School in Advanced Optical Technologies (SAOT)ErlangenGermany
| | - Fanuel Mehari
- Department of Mechanical Engineering, Friedrich‐Alexander‐Universität Erlangen‐Nürnberg (FAU)Institute of Photonic Technologies (LPT)ErlangenGermany
- Erlangen Graduate School in Advanced Optical Technologies (SAOT)ErlangenGermany
| | - Martin Hohmann
- Department of Mechanical Engineering, Friedrich‐Alexander‐Universität Erlangen‐Nürnberg (FAU)Institute of Photonic Technologies (LPT)ErlangenGermany
- Erlangen Graduate School in Advanced Optical Technologies (SAOT)ErlangenGermany
| | - Cita Löhr
- Department of Mechanical Engineering, Friedrich‐Alexander‐Universität Erlangen‐Nürnberg (FAU)Institute of Photonic Technologies (LPT)ErlangenGermany
| | - Maximilian J. Waldner
- Erlangen Graduate School in Advanced Optical Technologies (SAOT)ErlangenGermany
- Department of Medicine 1Friedrich‐Alexander‐Universität Erlangen‐Nürnberg (FAU)ErlangenGermany
| | - Michael Schmidt
- Department of Mechanical Engineering, Friedrich‐Alexander‐Universität Erlangen‐Nürnberg (FAU)Institute of Photonic Technologies (LPT)ErlangenGermany
- Erlangen Graduate School in Advanced Optical Technologies (SAOT)ErlangenGermany
| | - Zeev Zalevsky
- Erlangen Graduate School in Advanced Optical Technologies (SAOT)ErlangenGermany
- Faculty of EngineeringBar‐Ilan UniversityRamat‐GanIsrael
| | - Florian Klämpfl
- Department of Mechanical Engineering, Friedrich‐Alexander‐Universität Erlangen‐Nürnberg (FAU)Institute of Photonic Technologies (LPT)ErlangenGermany
- Erlangen Graduate School in Advanced Optical Technologies (SAOT)ErlangenGermany
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2
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Fields GB, Stawikowski MJ. Imaging Matrix Metalloproteinase Activity Implicated in Breast Cancer Progression. Methods Mol Biol 2016; 1406:303-29. [PMID: 26820965 DOI: 10.1007/978-1-4939-3444-7_25] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Proteolysis has been cited as an important contributor to cancer initiation and progression. One can take advantage of tumor-associated proteases to selectively deliver imaging agents. Protease-activated imaging systems have been developed using substrates designed for hydrolysis by members of the matrix metalloproteinase (MMP) family. We presently describe approaches by which one can optically image matrix metalloproteinase activity implicated in breast cancer progression, with consideration of selective versus broad protease probes.
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Affiliation(s)
- Gregg B Fields
- Department of Chemistry & Biochemistry, Florida Atlantic University, Jupiter, FL, 33458, USA. .,Department of Chemistry, The Scripps Research Institute/Scripps Florida, Jupiter, FL, 33458, USA. .,Departments of Chemistry and Biology, Torrey Pines Institute for Molecular Studies, Port St. Lucie, FL, 34987, USA.
| | - Maciej J Stawikowski
- Department of Chemistry & Biochemistry, Florida Atlantic University, Jupiter, FL, 33458, USA
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3
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Piao D. Photon diffusion in a homogeneous medium bounded externally or internally by an infinitely long circular cylindrical applicator. VI. Time-domain analysis. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2014; 31:2232-43. [PMID: 25401250 DOI: 10.1364/josaa.31.002232] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Part VI analytically examines time-domain (TD) photon diffusion in a homogeneous medium enclosed by a "concave" circular cylindrical applicator or enclosing a "convex" circular cylindrical applicator, both geometries being infinite in the longitudinal dimension. The aim is to assess characteristics of TD photon diffusion, in response to a spatially and temporally impulsive source, versus the line-of-sight source-detector distance along the azimuthal or longitudinal direction on the concave or convex medium-applicator interface. By comparing to their counterparts evaluated along a straight line on a semi-infinite medium-applicator interface versus the same source-detector distance, the following patterns are indicated: (1) the peak photon fluence rate is always reached sooner in concave and later in convex geometry; (2) the peak photon fluence rate decreases slower along the azimuthal and faster along the longitudinal direction on the concave interface, and conversely on the convex interface; (3) the total photon fluence decreases slower along the azimuthal and faster along the longitudinal direction on the concave interface, and conversely on the convex interface; (4) the ratio between the peak photon fluence rate and the total fluence is always greater in concave geometry and smaller in convex geometry. The total fluence is equivalent to the steady-state photon fluence analyzed in Part I [J. Opt. Soc. Am. A27, 648 (2010)10.1364/JOSAA.27.000648JOAOD61084-7529]. The patterns of peak fluence rate, time to reaching peak fluence rate, and the ratio of these two, correspond to those of AC amplitude, phase, and modulation depth of frequency-domain results demonstrated in Part IV [J. Opt. Soc. Am. A29, 1445 (2012)10.1364/JOSAA.29.001445JOAOD61084-7529].
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4
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Zhang X, Bresee J, Cheney PP, Xu B, Bhowmick M, Cudic M, Fields GB, Edwards WB. Evaluation of a triple-helical peptide with quenched FluorSophores for optical imaging of MMP-2 and MMP-9 proteolytic activity. Molecules 2014; 19:8571-88. [PMID: 24959683 PMCID: PMC4347883 DOI: 10.3390/molecules19068571] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2014] [Revised: 06/05/2014] [Accepted: 06/11/2014] [Indexed: 01/15/2023] Open
Abstract
Matrix metalloproteinases (MMP) 2 and 9, the gelatinases, have consistently been associated with tumor progression. The development of gelatinase-specific probes will be critical for identifying in vivo gelatinoic activity to understand the molecular role of the gelatinases in tumor development. Recently, a self-assembling homotrimeric triple-helical peptide (THP), incorporating a sequence from type V collagen, with high substrate specificity to the gelatinases has been developed. To determine whether this THP would be suitable for imaging protease activity, 5-carboxyfluorescein (5FAM) was conjugated, resulting in 5FAM3-THP and 5FAM6-THP, which were quenched up to 50%. 5FAM6-THP hydrolysis by MMP-2 and MMP-9 displayed kcat/KM values of 1.5 × 104 and 5.4 × 103 M−1 s−1, respectively. Additionally 5FAM6-THP visualized gelatinase activity in gelatinase positive HT-1080 cells, but not in gelatinase negative MCF-7 cells. Furthermore, the fluorescence in the HT-1080 cells was greatly attenuated by the addition of a MMP-2 and MMP-9 inhibitor, SB-3CT, indicating that the observed fluorescence release was mediated by gelatinase proteolysis and not non-specific proteolysis of the THPs. These results demonstrate that THPs fully substituted with fluorophores maintain their substrate specificity to the gelatinases in human cancer cells and may be useful in in vivo molecular imaging of gelatinase activity.
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Affiliation(s)
- Xuan Zhang
- Department of Radiology, University of Pittsburgh, Pittsburgh, PA 15219, USA.
| | - Jamee Bresee
- Department of Radiology, University of Pittsburgh, Pittsburgh, PA 15219, USA.
| | - Philip P Cheney
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA.
| | - Baogang Xu
- Department of Radiology, Washington University in St Louis, St Louis, MO 63110, USA.
| | - Manishabrata Bhowmick
- Torrey Pines Institute for Molecular Studies, 11350 SW Village Parkway, Port St. Lucie, FL 34987, USA.
| | - Mare Cudic
- Torrey Pines Institute for Molecular Studies, 11350 SW Village Parkway, Port St. Lucie, FL 34987, USA.
| | - Gregg B Fields
- Torrey Pines Institute for Molecular Studies, 11350 SW Village Parkway, Port St. Lucie, FL 34987, USA.
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5
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Grabtchak S, Callaghan KB, Whelan WM. Tagging photons with gold nanoparticles as localized absorbers in optical measurements in turbid media. BIOMEDICAL OPTICS EXPRESS 2013; 4:2989-3006. [PMID: 24409396 PMCID: PMC3862156 DOI: 10.1364/boe.4.002989] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2013] [Revised: 11/19/2013] [Accepted: 11/21/2013] [Indexed: 06/03/2023]
Abstract
We analyze a role of a localized inclusion as a probe for spatial distributions of migrating photons in turbid media. We present new experimental data and two-dimensional analysis of radiance detection of a localized absorptive inclusion formed by gold nanoparticles in Intralipid-1% when the target is translated along the line connecting the light source and detector. Data are analyzed using the novel analytical expression for the relative angular photon distribution function for radiance developed by extending the perturbation approach for fluence. Obtained photon maps allow predicting conditions for detectability of inclusions for which proximity to the detector is essential.
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Affiliation(s)
- Serge Grabtchak
- Department of Physics, University of Prince Edward Island, Charlottetown, PEI C1A4P3, Canada
- Departments of Electrical and Computer Engineering, and Physics, Dalhousie University, Halifax, NS B3H3J5, Canada
| | - Kristen B. Callaghan
- Department of Physics, University of Prince Edward Island, Charlottetown, PEI C1A4P3, Canada
| | - William M. Whelan
- Department of Physics, University of Prince Edward Island, Charlottetown, PEI C1A4P3, Canada
- Atlantic Veterinary College, Charlottetown, PEI C1A4P3, Canada
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6
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Zhang A, Piao D. Photon diffusion in a homogeneous medium bounded externally or internally by an infinitely long circular cylindrical applicator. IV. Frequency-domain analysis. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2012; 29:1445-58. [PMID: 22751413 DOI: 10.1364/josaa.29.001445] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Part IV examines frequency-domain photon diffusion in a homogeneous medium enclosed by a "concave" circular cylindrical applicator or enclosing a "convex" circular cylindrical applicator, both geometries being infinite in the longitudinal dimension. The aim is to assess by analogical and finite-element methods the changes of AC amplitude, modulation depth, and phase with respect to the line-of-sight source-detector distance for a source and a detector located along the azimuthal or longitudinal direction on the concave or convex medium-applicator interface. By comparing to their counterparts along a straight line on a semi-infinite medium-applicator interface, for the same line-of-sight source-detector distance, it is found that: (1) the decay-rate of AC photon fluence is smaller along the azimuthal direction and greater along the longitudinal direction on the concave interface, (2) the decay-rate of AC photon fluence is greater along the azimuthal direction and smaller along the longitudinal direction on the convex interface, (3) the modulation depth along both azimuthal and longitudinal directions decays more slowly on the concave interface and faster on the convex interface, and (4) the phase along both azimuthal and longitudinal directions increases more slowly on the concave interface and faster on the convex interface.
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Affiliation(s)
- Anqi Zhang
- School of Electrical and Computer Engineering, Oklahoma State University, Stillwater, Oklahoma 74078, USA
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7
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Akers WJ, Xu B, Lee H, Sudlow GP, Fields GB, Achilefu S, Edwards WB. Detection of MMP-2 and MMP-9 activity in vivo with a triple-helical peptide optical probe. Bioconjug Chem 2012; 23:656-63. [PMID: 22309692 DOI: 10.1021/bc300027y] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
We report a novel activatable NIR fluorescent probe for in vivo detection of cancer-related matrix metalloproteinase (MMP) activity. The probe is based on a triple-helical peptide substrate (THP) with high specificity for MMP-2 and MMP-9 relative to other members of the MMP family. MMP-2 and MMP-9 (also known as gelatinases) are specifically associated with cancer cell invasion and cancer-related angiogenesis. At the center of each 5 kDa peptide strand is a gelatinase sensitive sequence flanked by 2 Lys residues conjugated with NIR fluorescent dyes. Upon self-assembly of the triple-helical structure, the 3 peptide chains intertwine, bringing the fluorophores into close proximity and reducing fluorescence via quenching. Upon enzymatic cleavage of the triple-helical peptide, 6 labeled peptide chains are released, resulting in an amplified fluorescent signal. The fluorescence yield of the probe increases 3.8-fold upon activation. Kinetic analysis showed a rate of LS276-THP hydrolysis by MMP-2 (k(cat)/K(M) = 30,000 s(-1) M(-1)) similar to that of MMP-2 catalysis of an analogous fluorogenic THP. Administration of LS276-THP to mice bearing a human fibrosarcoma xenografted tumor resulted in a tumor fluorescence signal more than 5-fold greater than that of muscle. This signal enhancement was reduced by treatment with the MMP inhibitor Ilomostat, indicating that the observed tumor fluorescence was indeed enzyme mediated. These results are the first to demonstrate that triple-helical peptides are suitable for highly specific in vivo detection of tumor-related MMP-2 and MMP-9 activity.
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Affiliation(s)
- Walter J Akers
- Mallinckrodt Institute of Radiology, Washington University, School of Medicine, St. Louis, Missouri 63110, USA
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8
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Zhang A, Piao D, Yao G, Bunting CF, Jiang Y. Diffuse photon remission along unique spiral paths on a cylindrical interface is modeled by photon remission along a straight line on a semi-infinite interface. OPTICS LETTERS 2011; 36:654-656. [PMID: 21368938 DOI: 10.1364/ol.36.000654] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
We demonstrate that, for a long cylindrical applicator that interfaces concavely or convexly with a scattering-dominant medium, a unique set of spiral-shaped directions exist on the tissue-applicator interface, along which the diffuse photon remission is essentially modeled by the photon remission along a straight line on a semi-infinite interface. This interesting phenomenon, which is validated in steady state in this work by finite-element and Monte Carlo methods, may be particularly useful for simplifying deeper-tissue sensing in endoscopic imaging geometry.
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Affiliation(s)
- Anqi Zhang
- School of Electrical and Computer Engineering, Oklahoma State University, Stillwater, Oklahoma 74078, USA
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9
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Li Z, Niedre M. Hybrid use of early and quasi-continuous wave photons in time-domain tomographic imaging for improved resolution and quantitative accuracy. BIOMEDICAL OPTICS EXPRESS 2011; 2:665-79. [PMID: 21412471 PMCID: PMC3047371 DOI: 10.1364/boe.2.000665] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2010] [Revised: 02/07/2011] [Accepted: 02/15/2011] [Indexed: 05/04/2023]
Abstract
Measurement of early-photons (EPs) from a pulsed laser source has been shown to improve imaging resolution versus continuous wave (CW) systems in diffuse optical tomography (DOT) and fluorescence mediated tomography (FMT). However, EP systems also have reduced noise performance versus CW systems since EP measurements require temporal rejection of large numbers of transmitted photons. In this work, we describe a 'hybrid data set' (HDS) image reconstruction approach, the goal of which was to produce a final image that retained the resolution and noise advantages of EP and CW data sets, respectively. Here, CW data was first reconstructed to produce a quantitatively accurate 'initial guess' intermediate image, and then this was refined with EP data to yield a higher resolution final image. We performed a series of studies with simulated data to test the resolution, quantitative accuracy and detection sensitivity of the approach. We showed that in principle it was possible to produce final images that retained the bulk of the resolution and quantitative accuracy of EP and CW images, respectively, but the HDS approach did not improve the instrument sensitivity compared to EP data alone.
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Affiliation(s)
- Zhi Li
- Department of Electrical and Computer Engineering, Dana Research Center, Northeastern University, Boston, MA, 02125, USA
| | - Mark Niedre
- Department of Electrical and Computer Engineering, Dana Research Center, Northeastern University, Boston, MA, 02125, USA
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10
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Da Silva A, Djaker N, Ducros N, Dinten JM, Rizo P. Real time optical method for localization of inclusions embedded in turbid media. OPTICS EXPRESS 2010; 18:7753-7762. [PMID: 20588616 DOI: 10.1364/oe.18.007753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
A simple and fast time-domain method for localizing inclusions, fluorescent optical probes or absorbers, is presented. The method offers new possibilities for situations where complete tomographic measurements are not permitted by the examined object, for example in endoscopic examination of the human prostate or the oesophagus. Feasibility has been envisioned with a phantom study conducted on a point-like fluorochrome embedded in a diffusing medium mimicking the optical properties of biological tissues.
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Affiliation(s)
- Anabela Da Silva
- CEA, LETI, micro-Technologies for Biology and Healthcare Division, 17 rue des Martyrs, F38054 Grenoble Cedex 9, France.
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11
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Zhang A, Piao D, Bunting CF, Pogue BW. Photon diffusion in a homogeneous medium bounded externally or internally by an infinitely long circular cylindrical applicator. I. Steady-state theory. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2010; 27:648-62. [PMID: 20208959 DOI: 10.1364/josaa.27.000648] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
This work presents an analytic treatment for photon diffusion in a homogeneous medium bounded externally or internally by an infinitely long circular cylindrical applicator. Focusing initially on the steady-state condition, the photon diffusion in these two geometries is solved in cylindrical coordinates by using modified Bessel functions and by applying the extrapolated boundary condition. For large cylinder diameter, the analytic solutions may be simplified to a format employing the physical source and its image source with respect to a semi-infinite geometry and a radius-dependent term to account for the shape and dimension of the cylinder. The analytic solutions and their approximations are evaluated numerically to demonstrate qualitatively the effect of the applicator curvature--either concave or convex--and the radius on the photon fluence rate as a function of the source-detector distance, in comparison with that in the semi-infinite geometry. This work is subjected to quantitative examination in a coming second part and possible extension to time-resolved analysis.
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Affiliation(s)
- Anqi Zhang
- School of Electrical and Computer Engineering, Oklahoma State University, Stillwater, Oklahoma 74078, USA
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12
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Gupta S, Yalavarthy PK, Roy D, Piao D, Vasu RM. Singular value decomposition based computationally efficient algorithm for rapid dynamic near-infrared diffuse optical tomography. Med Phys 2010; 36:5559-67. [PMID: 20095268 DOI: 10.1118/1.3261029] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE A computationally efficient algorithm (linear iterative type) based on singular value decomposition (SVD) of the Jacobian has been developed that can be used in rapid dynamic near-infrared (NIR) diffuse optical tomography. METHODS Numerical and experimental studies have been conducted to prove the computational efficacy of this SVD-based algorithm over conventional optical image reconstruction algorithms. RESULTS These studies indicate that the performance of linear iterative algorithms in terms of contrast recovery (quantitation of optical images) is better compared to nonlinear iterative (conventional) algorithms, provided the initial guess is close to the actual solution. The nonlinear algorithms can provide better quality images compared to the linear iterative type algorithms. Moreover, the analytical and numerical equivalence of the SVD-based algorithm to linear iterative algorithms was also established as a part of this work. It is also demonstrated that the SVD-based image reconstruction typically requires O(NN2) operations per iteration, as contrasted with linear and nonlinear iterative methods that, respectively, require O(NN3) and O(NN6) operations, with "NN" being the number of unknown parameters in the optical image reconstruction procedure. CONCLUSIONS This SVD-based computationally efficient algorithm can make the integration of image reconstruction procedure with the data acquisition feasible, in turn making the rapid dynamic NIR tomography viable in the clinic to continuously monitor hemodynamic changes in the tissue pathophysiology.
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Affiliation(s)
- Saurabh Gupta
- Department of Instrumentation, Indian Institute of Science, Bangalore 560 012, India
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13
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Patel NL, Lin ZJ, Rathore Y, Livingston EH, Liu H, Alexandrakis G. Relative capacities of time-gated versus continuous-wave imaging to localize tissue embedded vessels with increasing depth. JOURNAL OF BIOMEDICAL OPTICS 2010; 15:016015. [PMID: 20210461 DOI: 10.1117/1.3299728] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Surgeons often cannot see major vessels embedded in adipose tissue and inadvertently injure them. One such example occurs during surgical removal of the gallbladder, where injury of the nearby common bile duct leads to life-threatening complications. Near-infrared imaging of the intraoperative field may help surgeons localize such critical tissue-embedded vessels. We have investigated how continuous-wave (CW) imaging performs relative to time-gated wide-field imaging, presently a rather costly technology, under broad Gaussian beam-illumination conditions. We have studied the simplified case of an isolated cylinder having bile-duct optical properties, embedded at different depths within a 2-cm slab of adipose tissue. Monte Carlo simulations were preformed for both reflectance and transillumination geometries. The relative performance of CW versus time-gated imaging was compared in terms of spatial resolution and contrast-to-background ratio in the resulting simulated images. It was found that time-gated imaging offers superior spatial resolution and vessel-detection sensitivity in most cases, though CW transillumination measurements may also offer satisfactory performance for this tissue geometry at lower cost. Experiments were performed in reflectance geometry to validate simulation results, and potential challenges in the translation of this technology to the clinic are discussed.
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Affiliation(s)
- Nimit L Patel
- University of Texas at Arlington, Bioengineering Department, Arlington, Texas 76010, USA
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14
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Boutet J, Herve L, Debourdeau M, Guyon L, Peltie P, Dinten JM, Saroul L, Duboeuf F, Vray D. Bimodal ultrasound and fluorescence approach for prostate cancer diagnosis. JOURNAL OF BIOMEDICAL OPTICS 2009; 14:064001. [PMID: 20059239 DOI: 10.1117/1.3257236] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Finding a way to combine ultrasound and fluorescence optical imaging on an endorectal probe may improve early detection of prostate cancer. The ultrasound provides morphological information about the prostate, while the optical system detects and locates fluorophore-marked tumors. A tissue-mimicking phantom, which is representative of prostate tissues both on its optical (absorption mu(a) and diffusion mu(s) (')) and its ultrasound properties, has been made by our team. A transrectal probe adapted to fluorescence diffuse optical tomography measurements was also developed. Measurements were taken on the prostate phantom with this probe based on a pulsed laser and a time-resolved detection system. A reconstruction algorithm was then used to help locate and quantify fluorescent inclusions of different concentrations at fixed depths.
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Affiliation(s)
- Jerome Boutet
- Département des Micro-Technologies pour la Biologie et la Santé, CEA-LETI-MINATEC French Atomic Energy Comission, 17 rue des Martyrs, Grenoble, F38054, France.
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15
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Jiang Z, Piao D, Xu G, Ritchey JW, Holyoak GR, Bartels KE, Bunting CF, Slobodov G, Krasinski JS. Trans-rectal ultrasound-coupled near-infrared optical tomography of the prostate, part II: experimental demonstration. OPTICS EXPRESS 2008; 16:17505-20. [PMID: 18958031 DOI: 10.1364/oe.16.017505] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
We demonstrate trans-rectal optical tomography of the prostate using an endo-rectal near-infrared (NIR) applicator integrated with a transrectal ultrasound (TRUS) probe. The endo-rectal NIR applicator incorporated a design presented in our previously reported work. A continuous-wave NIR optical tomography system is combined with a commercial US scanner to form the dual-modality imager. Sagittal transrectal imaging is performed concurrently by endo-rectal NIR and TRUS. The TRUS ensures accurate positioning of the NIR applicator as well as guides NIR image reconstruction using the spatial prior of the target. The use of a condom, which is standard for TRUS, is found to have minimal effect on trans-rectal NIR imaging. Tests on avian tissues validates that NIR imaging can recover the absorption contrast of a target, and its accuracy is improved when the TRUS spatial prior is incorporated. Trans-rectal NIR/US imaging of a healthy canine prostate in situ is reported.
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Affiliation(s)
- Zhen Jiang
- School of Electrical and Computer Engineering, Oklahoma State University, Stillwater, OK 74078, USA
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16
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Alexandrakis G, Nadkar D, Patel NL, Liu H, Livingston EH. Localization of adipose tissue embedded biliary tree vessels by use of near-infrared diffuse photon propagation models: a computational feasibility study. APPLIED OPTICS 2008; 47:5261-5271. [PMID: 18846164 DOI: 10.1364/ao.47.005261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Biliary tree structures are embedded in adipose tissue and, therefore, cannot be visualized directly by the surgeon during cholecystectomy operations. This can lead to inadvertent injuries with serious complications for the patient. Computational studies were performed to assess the feasibility of noninvasively localizing these structures from spectrally resolved near-infrared reflectance measurements. Methodologies were developed for vessel localization, both on the adipose tissue surface and depthwise, by use of semi-infinite and two-layer models of diffuse photon propagation in tissues, respectively. The simulation results, along with some preliminary experimental measurements on tissue-simulating phantoms, prove the feasibility of these methods and show promise for their future clinical application.
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Affiliation(s)
- George Alexandrakis
- Department of Bioengineering, University of Texas at Arlington, 501 West First Street, Arlington, Texas 96019, USA.
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17
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Belhadj N, Park Y, Larochelle S, Dossou K, Azaña J. UV-induced modification of stress distribution in optical fibers and its contribution to Bragg grating birefringence. OPTICS EXPRESS 2008; 16:8727-8741. [PMID: 18545586 DOI: 10.1364/oe.16.008727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
This paper discusses the importance of stress-induced contributions to the photo-induced birefringence observed in fiber Bragg gratings. Optical tomography measurements are performed in exposed and unexposed fibers to extract the stress profiles induced by UV-writing of fiber Bragg gratings for various exposure levels. A photoelastic analysis and a high-order isoparametric finite elements method are then used to calculate the birefringence caused by stress profile modifications. The results are compared to the birefringence directly measured by spectral analysis of a chirped fiber grating with multiple phase-shifts. We can therefore estimate the fraction of the photo-induced birefringence due to stress-induced anisotropy following UV exposure.
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Affiliation(s)
- N Belhadj
- Centre d'optique, photonique et laser (COPL), Département de génie électrique et de génie informatique, Université Laval, Québec (Québec) Canada
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18
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Rodriguez FJ, Wang FX, Kauranen M. Calibration of the second-order nonlinear optical susceptibility of surface and bulk of glass. OPTICS EXPRESS 2008; 16:8704-8710. [PMID: 18545583 DOI: 10.1364/oe.16.008704] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
A two-beam second-harmonic generation technique is developed to calibrate the magnitude of the second-order nonlinear optical susceptibility components of surface and bulk (multipolar origin) of isotropic materials. The values obtained for fused silica calibrated against ChiXXX of crystalline quartz are chi parallel parallel perpendicular = 7.9(4), chi perpendicular parallel parallel (+)gamma = 3.8(4), parallel perpendicular perpendicular perpendicular(+)gamma = 59(4), and delta' = 7.8(4) in units of 10(-22) m(2)/V. Similar values are obtained for BK7 glass. An alternative way of calibration against ChiXYZ of quartz is demonstrated. The technique could also be extended to characterize the susceptibility tensor of crystals as a convenient alternative to the Maker-fringe technique.
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Affiliation(s)
- Francisco J Rodriguez
- Department of Physics,Tampere University of Technology, P.O. Box 692, FI-33101 Tampere, Finland.
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19
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Philippe S, Bradley AL, Maldonado-Basilio R, Surre F, Kennedy BF, Landais P, Soto-Ortiz H. Polarization dependence of non-linear gain compression factor in semiconductor optical amplifier. OPTICS EXPRESS 2008; 16:8641-8648. [PMID: 18545577 DOI: 10.1364/oe.16.008641] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We investigate the power and the polarization dependence of the intraband dynamics in a bulk semiconductor optical amplifier using both a 2.5-ps pump-probe experimental set-up in contra-propagation and a theoretical model. Our model is based on the rate equations and takes into account the polarization dependence of the gain. By comparing experimental and computational results we are able to highlight the dependences of the intraband dynamics and to extract the non-linear gain compression factor as a function of both pulse energy and polarization of the injected pulses.
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20
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Yazdanfar S, Kenny KB, Tasimi K, Corwin AD, Dixon EL, Filkins RJ. Simple and robust image-based autofocusing for digital microscopy. OPTICS EXPRESS 2008; 16:8670-7. [PMID: 18545580 DOI: 10.1364/oe.16.008670] [Citation(s) in RCA: 67] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
A simple image-based autofocusing scheme for digital microscopy is demonstrated that uses as few as two intermediate images to bring the sample into focus. The algorithm is adapted to a commercial inverted microscope and used to automate brightfield and fluorescence imaging of histopathology tissue sections.
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Affiliation(s)
- Siavash Yazdanfar
- GE Global Research, One Research Circle, Niskayuna, N.Y. 12309, USA.
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21
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Xu F, Poon AW. Silicon cross-connect filters using microring resonator coupled multimode-interference-based waveguide crossings. OPTICS EXPRESS 2008; 16:8649-8657. [PMID: 18545578 DOI: 10.1364/oe.16.008649] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We report silicon cross-connect filters using microring resonator coupled multimode-interference (MMI) based waveguide crossings. Our experiments reveal that the MMI-based cross-connect filters impose lower crosstalk at the crossing than the conventional cross-connect filters using plain crossings, while offering a nearly symmetric resonance line shape in the drop-port transmission. As a proof-of-concept for cross-connection applications, we demonstrate on a silicon-on-insulator substrate (i) a 4-channel 1 x 4 linear-cascaded MMI-based cross-connect filter, and (ii) a 2-channel 2 x 2 array-cascaded MMI-based cross-connect filter.
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Affiliation(s)
- Fang Xu
- Photonic Device Laboratory, Department of Electronic and Computer Engineering, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong SAR, China
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22
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Heilmann RK, Ahn M, Gullikson EM, Schattenburg ML. Blazed high-efficiency x-ray diffraction via transmission through arrays of nanometer-scale mirrors. OPTICS EXPRESS 2008; 16:8658-8669. [PMID: 18545579 DOI: 10.1364/oe.16.008658] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Diffraction gratings are ubiquitous wavelength dispersive elements for photons as well as for subatomic particles, atoms, and large molecules. They serve as enabling devices for spectroscopy, microscopy, and interferometry in numerous applications across the physical sciences. Transmission gratings are required in applications that demand high alignment and figure error tolerances, low weight and size, or a straight-through zero-order beam. However, photons or particles are often strongly absorbed upon transmission, e.g., in the increasingly important extreme ultraviolet (EUV) and soft x-ray band, leading to low diffraction efficiency. We demonstrate the performance of a critical-angle transmission (CAT) grating in the EUV and soft x-ray band that for the first time combines the advantages of transmission gratings with the superior broadband efficiency of blazed reflection gratings via reflection from nanofabricated periodic arrays of atomically smooth nanometer-thin silicon mirrors at angles below the critical angle for total external reflection. The efficiency of the CAT grating design is not limited to photons, but also opens the door to new, sensitive, and compact experiments and applications in atom and neutron optics, as well as for the efficient diffraction of electrons, ions, or molecules.
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Affiliation(s)
- Ralf K Heilmann
- 1Space Nanotechnology Laboratory, MIT Kavli Institute for Astrophysics and Space Research, Massachusetts Institute of Technology, Cambridge, MA 02026, USA.
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23
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Yoo HG, Fu Y, Riley D, Shin JH, Fauchet PM. Birefringence and optical power confinement in horizontal multi-slot waveguides made of Si and SiO2. OPTICS EXPRESS 2008; 16:8623-8628. [PMID: 18545575 DOI: 10.1364/oe.16.008623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Through simulations and measurements, we show that in multi-slot thin film waveguides, the TM polarized modes can be confined mostly in the low refractive index layers of the waveguide. The structure consisted of alternating layers of a-Si and SiO(2), in the thickness range between 3 and 40 nm, for which the slots were the SiO(2) layers. Simulations were performed using the transfer matrix method and experiments using the m-line technique at 1.55 mum. The dependence of the birefringence and of the power confinement in the slots was studied as a function of the waveguide thickness, the Si and SiO(2) layer thicknesses, and the SiO(2) / Si layer thickness ratio. We find a large birefringence-a refractive index difference between TE and TM modes-as large as 0.8. For TM polarized modes, up to ~ 85% of the total power in the fundamental mode can be confined in the slots.
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Affiliation(s)
- Han G Yoo
- Department of Physics and Astronomy, University of Rochester, Rochester, NY 14627, USA.
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24
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Berger JA, Greco MJ, Schroeder WA. High-power, femtosecond, thermal-lens-shaped Yb:KGW oscillator. OPTICS EXPRESS 2008; 16:8629-8640. [PMID: 18545576 DOI: 10.1364/oe.16.008629] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Thermal lens shaping for astigmatism compensation is extended to a high-power, diode-pumped, Yb:KGW laser by employing a gain crystal geometry designed for efficient polarized pumping. The 63MHz oscillator is soliton mode-locked with the aid of a saturable Bragg reflector to yield 250fs (347fs) pulses at an output power of 3.5W (5W). Frequency doubling of the 250fs pulses with an intrinsic efficiency >60% provides 1.65W of average green power.
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Affiliation(s)
- Joel A Berger
- Department of Physics (m/c 273), University of Illinois at Chicago, 845 W. Taylor Street (rm. 2236), Chicago, IL 60607-7059, USA.
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25
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Andermahr N, Fallnich C. Interaction of transverse modes in a single-frequency few-mode fiber amplifier caused by local gain saturation. OPTICS EXPRESS 2008; 16:8678-8684. [PMID: 18545581 DOI: 10.1364/oe.16.008678] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We report on the behavior of modal polarization states in a single-frequency, ytterbium-doped, few-mode fiber amplifier. Experimental data show that the polarization of the individual transverse modes depends on the pump power and that the modes tend towards orthogonally polarized states with increasing gain. The observations can be explained by local gain saturation that favors the amplification of differently polarized modes.
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Affiliation(s)
- N Andermahr
- Laser Zentrum Hannover, Hollerithallee 8, 30419 Hannover, Germany.
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26
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Wang Q, Yang H, Agrawal A, Wang NS, Pfefer TJ. Measurement of internal tissue optical properties at ultraviolet and visible wavelengths: Development and implementation of a fiberoptic-based system. OPTICS EXPRESS 2008; 16:8685-703. [PMID: 18545582 DOI: 10.1364/oe.16.008685] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
A novel, multi-wavelength, fiberoptic system was constructed, evaluated and implemented to determine internal tissue optical properties at ultraviolet A (UVA) and visible (VIS) wavelengths. Inverse modeling was performed with a neural network to estimate absorption and reduced scattering coefficients based on spatially-resolved reflectance distributions. The model was calibrated with simulated reflectance datasets generated using a condensed Monte Carlo approach with absorption coefficients up to 85 cm(-1) and reduced scattering coefficients up to 118 cm(-1). After theoretical and experimental evaluations of the system, optical properties of porcine bladder, colon, esophagus, oral mucosa, and liver were measured at 325, 375, 405, 445 and 532 nm. These data provide evidence that as wavelengths decrease into the UVA, the dominant tissue chromophore shifts from hemoglobin to structural proteins such as collagen. This system provides a high level of accuracy over a wide range of optical properties, and should be particularly useful for in situ characterization of highly attenuating biological tissues in the UVA-VIS.
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Affiliation(s)
- Quanzeng Wang
- Food and Drug Administration, Center for Devices & Radiological Health, Silver Spring, Maryland 20993, USA
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27
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Hakulinen T, Koskinen R, Okhotnikov OG. Low jitter Q-switched fiber laser using optically driven surface-normal saturable absorber modulator. OPTICS EXPRESS 2008; 16:8720-8726. [PMID: 18545585 DOI: 10.1364/oe.16.008720] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
A technique for stabilizing the repetition frequency of a passively Q-switched laser is presented using an optically driven surface-normal semiconductor modulator. A method is capable of significant reduction of the timing jitter in a passively Q-switched laser by optical triggering the saturable absorber semiconductor reflector. The experimental demonstration using passively Q-switched ytterbium-doped fiber laser shows the jitter reduction by factor of 1.66??10(3) from 50 mus down to 30 ns.
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Affiliation(s)
- Tommi Hakulinen
- Optoelectronics Research Centre, Tampere University of Technology, Korkeakoulunkatu 3, 33720 Tampere.
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28
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Kepshire D, Davis SC, Dehghani H, Paulsen KD, Pogue BW. Fluorescence tomography characterization for sub-surface imaging with protoporphyrin IX. OPTICS EXPRESS 2008; 16:8581-93. [PMID: 18545571 PMCID: PMC2696352 DOI: 10.1364/oe.16.008581] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Optical imaging of fluorescent objects embedded in a tissue simulating medium was characterized using non-contact based approaches to fluorescence remittance imaging (FRI) and sub-surface fluorescence diffuse optical tomography (FDOT). Using Protoporphyrin IX as a fluorescent agent, experiments were performed on tissue phantoms comprised of typical in-vivo tumor to normal tissue contrast ratios, ranging from 3.5:1 up to 10:1. It was found that tomographic imaging was able to recover interior inclusions with high contrast relative to the background; however, simple planar fluorescence imaging provided a superior contrast to noise ratio. Overall, FRI performed optimally when the object was located on or close to the surface and, perhaps most importantly, FDOT was able to recover specific depth information about the location of embedded regions. The results indicate that an optimal system for localizing embedded fluorescent regions should combine fluorescence reflectance imaging for high sensitivity and sub-surface tomography for depth detection, thereby allowing more accurate localization in all three directions within the tissue.
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Affiliation(s)
- Dax Kepshire
- Thayer School of Engineering, Dartmouth College, Hanover NH 03755 USA
- Corresponding author: ,
| | - Scott C. Davis
- Thayer School of Engineering, Dartmouth College, Hanover NH 03755 USA
| | - Hamid Dehghani
- Thayer School of Engineering, Dartmouth College, Hanover NH 03755 USA
- School of Physics, University of Exeter, Stocker Road, Exeter, EX4 4QL, UK
| | - Keith D. Paulsen
- Thayer School of Engineering, Dartmouth College, Hanover NH 03755 USA
| | - Brian W. Pogue
- Thayer School of Engineering, Dartmouth College, Hanover NH 03755 USA
- Corresponding author: ,
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29
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Asatsuma T, Baba T. Aberration reduction and unique light focusing in a photonic crystal negative refractive lens. OPTICS EXPRESS 2008; 16:8711-8719. [PMID: 18545584 DOI: 10.1364/oe.16.008711] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Light focusing characteristics of a negative refractive lens fabricated out of a silicon-on-insulator photonic crystal (PC) slab are investigated theoretically and experimentally. It focuses in the near infrared, but the focal spot is degraded by a lens aberration. To reduce the aberration, we designed a composite PC that gives rise to a narrower focal spot. In addition, two unique functions of this lens are demonstrated: refocusing outside of the PC and parallel focusing, enabling image transfer and real image formation, respectively. These results prove the feasibility of an in-plane free space optical network based on negative refraction.
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Affiliation(s)
- Tomohiko Asatsuma
- Yokohama National University, Department of Electrical and Computer Engineering 79-5 Tokiwadai, Hodogayaku, Yokohama 240-8501, Japan
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30
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Piao D, Pogue BW. Rapid near-infrared diffuse tomography for hemodynamic imaging using a low-coherence wideband light source. JOURNAL OF BIOMEDICAL OPTICS 2007; 12:014016. [PMID: 17343491 DOI: 10.1117/1.2709636] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Rapid near-infrared (NIR) diffuse optical tomography is implemented using a low-coherence source. The spectral bandwidth of the low-coherence source is dispersed and coupled to linearly bundled fibers, such that "spread"-spectral encoding among the bundled fibers is formed, and could be used for parallel source illumination onto tissue. In comparison with a previous spectral-encoding technique that employed multiple laser diodes, the use of a low-coherence source for spread-spectral encoding presents a few unique characteristics: (1) it provides shift-free spectral encoding; (2) it reduces the reconstruction uncertainty significantly owing to the minimization of spontaneous channel-to-channel intensity fluctuation; and (3) it enables the implementation of NIR tomography into an endoscopic imaging mode. A 20-mW superluminescent diode centered at 840 nm with a 40-nm bandwidth is used as the source, and a sampling speed of 5 Hz is obtained in a 27-mm imaging array consisting of eight sources and eight detection channels. The principles of using a low-coherence source for spread-spectral encoding are elaborated, the characteristic performances are demonstrated, and the preliminary results of imaging hemoglobin absorption variations during 10 s of voluntary breath-holding are presented.
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Affiliation(s)
- Daqing Piao
- Oklahoma State University, School of Electrical and Computer Engineering, Stillwater, Oklahoma 74078-5032, USA.
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