• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4608411)   Today's Articles (4836)   Subscriber (49375)
For: Yan H, Venkatesan K, Beaver JE, Klitgord N, Yildirim MA, Hao T, Hill DE, Cusick ME, Perrimon N, Roth FP, Vidal M. A genome-wide gene function prediction resource for Drosophila melanogaster. PLoS One 2010;5:e12139. [PMID: 20711346 PMCID: PMC2920829 DOI: 10.1371/journal.pone.0012139] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2010] [Accepted: 07/14/2010] [Indexed: 11/19/2022]  Open
Number Cited by Other Article(s)
1
Peng J, Xue H, Wei Z, Tuncali I, Hao J, Shang X. Integrating multi-network topology for gene function prediction using deep neural networks. Brief Bioinform 2020;22:2096-2105. [PMID: 32249297 DOI: 10.1093/bib/bbaa036] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2019] [Revised: 02/09/2020] [Accepted: 02/25/2020] [Indexed: 01/18/2023]  Open
2
Gligorijevic V, Barot M, Bonneau R. deepNF: deep network fusion for protein function prediction. Bioinformatics 2019;34:3873-3881. [PMID: 29868758 PMCID: PMC6223364 DOI: 10.1093/bioinformatics/bty440] [Citation(s) in RCA: 111] [Impact Index Per Article: 22.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2017] [Accepted: 05/28/2018] [Indexed: 01/10/2023]  Open
3
Kacsoh BZ, Barton S, Jiang Y, Zhou N, Mooney SD, Friedberg I, Radivojac P, Greene CS, Bosco G. New Drosophila Long-Term Memory Genes Revealed by Assessing Computational Function Prediction Methods. G3 (BETHESDA, MD.) 2019;9:251-267. [PMID: 30463884 PMCID: PMC6325913 DOI: 10.1534/g3.118.200867] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/11/2018] [Accepted: 11/20/2018] [Indexed: 01/26/2023]
4
Kacsoh BZ, Greene CS, Bosco G. Machine Learning Analysis Identifies Drosophila Grunge/Atrophin as an Important Learning and Memory Gene Required for Memory Retention and Social Learning. G3 (BETHESDA, MD.) 2017;7:3705-3718. [PMID: 28889104 PMCID: PMC5677163 DOI: 10.1534/g3.117.300172] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/29/2017] [Accepted: 08/07/2017] [Indexed: 12/12/2022]
5
Dolinski K, Troyanskaya OG. Implications of Big Data for cell biology. Mol Biol Cell 2016;26:2575-8. [PMID: 26174066 PMCID: PMC4501356 DOI: 10.1091/mbc.e13-12-0756] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
6
Pazos Obregón F, Papalardo C, Castro S, Guerberoff G, Cantera R. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. BMC Genomics 2015;16:694. [PMID: 26370122 PMCID: PMC4570697 DOI: 10.1186/s12864-015-1888-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2015] [Accepted: 09/01/2015] [Indexed: 12/02/2022]  Open
7
Kramer M, Dutkowski J, Yu M, Bafna V, Ideker T. Inferring gene ontologies from pairwise similarity data. Bioinformatics 2014;30:i34-42. [PMID: 24932003 PMCID: PMC4058954 DOI: 10.1093/bioinformatics/btu282] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]  Open
8
ŽITNIK MARINKA, ZUPAN BLAŽ. Matrix factorization-based data fusion for gene function prediction in baker's yeast and slime mold. PACIFIC SYMPOSIUM ON BIOCOMPUTING. PACIFIC SYMPOSIUM ON BIOCOMPUTING 2014:400-411. [PMID: 24297565 PMCID: PMC3902649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
9
Mitsakakis N, Razak Z, Escobar M, Westwood JT. Prediction of Drosophila melanogaster gene function using Support Vector Machines. BioData Min 2013;6:8. [PMID: 23547736 PMCID: PMC3669044 DOI: 10.1186/1756-0381-6-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Accepted: 02/11/2013] [Indexed: 11/23/2022]  Open
10
Ekins S, Shigeta R, Bunin BA. Bottlenecks caused by software gaps in miRNA and RNAi research. Pharm Res 2012;29:1717-21. [PMID: 22362409 DOI: 10.1007/s11095-012-0712-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2012] [Accepted: 02/15/2012] [Indexed: 10/28/2022]
11
Flockhart IT, Booker M, Hu Y, McElvany B, Gilly Q, Mathey-Prevot B, Perrimon N, Mohr SE. FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 update. Nucleic Acids Res 2011;40:D715-9. [PMID: 22067456 PMCID: PMC3245182 DOI: 10.1093/nar/gkr953] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]  Open
12
Greene CS, Troyanskaya OG. PILGRM: an interactive data-driven discovery platform for expert biologists. Nucleic Acids Res 2011;39:W368-74. [PMID: 21653547 PMCID: PMC3125802 DOI: 10.1093/nar/gkr440] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]  Open
13
Korcsmáros T, Szalay MS, Rovó P, Palotai R, Fazekas D, Lenti K, Farkas IJ, Csermely P, Vellai T. Signalogs: orthology-based identification of novel signaling pathway components in three metazoans. PLoS One 2011;6:e19240. [PMID: 21559328 PMCID: PMC3086880 DOI: 10.1371/journal.pone.0019240] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2010] [Accepted: 03/29/2011] [Indexed: 11/18/2022]  Open
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA