1
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Paliwal S, Ocker GK, Brinkman BAW. Metastability in networks of nonlinear stochastic integrate-and-fire neurons. ARXIV 2024:arXiv:2406.07445v1. [PMID: 38947936 PMCID: PMC11213153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Subscribe] [Scholar Register] [Indexed: 07/02/2024]
Abstract
Neurons in the brain continuously process the barrage of sensory inputs they receive from the environment. A wide array of experimental work has shown that the collective activity of neural populations encodes and processes this constant bombardment of information. How these collective patterns of activity depend on single neuron properties is often unclear. Single-neuron recordings have shown that individual neural responses to inputs are nonlinear, which prevents a straightforward extrapolation from single neuron features to emergent collective states. In this work, we use a field theoretic formulation of a stochastic leaky integrate-and-fire model to study the impact of nonlinear intensity functions on macroscopic network activity. We show that the interplay between nonlinear spike emission and membrane potential resets can i) give rise to metastable transitions between active firing rate states, and ii) can enhance or suppress mean firing rates and membrane potentials in opposite directions.
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Affiliation(s)
- Siddharth Paliwal
- Department of Neurobiology and Behavior, Stony Brook University, Stony Brook, NY, 11794, USA
| | - Gabriel Koch Ocker
- Department of Mathematics and Statistics, Boston University, Boston, MA, 02215, USA
| | - Braden A W Brinkman
- Department of Neurobiology and Behavior, Stony Brook University, Stony Brook, NY, 11794, USA
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2
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Pietras B, Schmutz V, Schwalger T. Mesoscopic description of hippocampal replay and metastability in spiking neural networks with short-term plasticity. PLoS Comput Biol 2022; 18:e1010809. [PMID: 36548392 PMCID: PMC9822116 DOI: 10.1371/journal.pcbi.1010809] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Revised: 01/06/2023] [Accepted: 12/11/2022] [Indexed: 12/24/2022] Open
Abstract
Bottom-up models of functionally relevant patterns of neural activity provide an explicit link between neuronal dynamics and computation. A prime example of functional activity patterns are propagating bursts of place-cell activities called hippocampal replay, which is critical for memory consolidation. The sudden and repeated occurrences of these burst states during ongoing neural activity suggest metastable neural circuit dynamics. As metastability has been attributed to noise and/or slow fatigue mechanisms, we propose a concise mesoscopic model which accounts for both. Crucially, our model is bottom-up: it is analytically derived from the dynamics of finite-size networks of Linear-Nonlinear Poisson neurons with short-term synaptic depression. As such, noise is explicitly linked to stochastic spiking and network size, and fatigue is explicitly linked to synaptic dynamics. To derive the mesoscopic model, we first consider a homogeneous spiking neural network and follow the temporal coarse-graining approach of Gillespie to obtain a "chemical Langevin equation", which can be naturally interpreted as a stochastic neural mass model. The Langevin equation is computationally inexpensive to simulate and enables a thorough study of metastable dynamics in classical setups (population spikes and Up-Down-states dynamics) by means of phase-plane analysis. An extension of the Langevin equation for small network sizes is also presented. The stochastic neural mass model constitutes the basic component of our mesoscopic model for replay. We show that the mesoscopic model faithfully captures the statistical structure of individual replayed trajectories in microscopic simulations and in previously reported experimental data. Moreover, compared to the deterministic Romani-Tsodyks model of place-cell dynamics, it exhibits a higher level of variability regarding order, direction and timing of replayed trajectories, which seems biologically more plausible and could be functionally desirable. This variability is the product of a new dynamical regime where metastability emerges from a complex interplay between finite-size fluctuations and local fatigue.
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Affiliation(s)
- Bastian Pietras
- Institute for Mathematics, Technische Universität Berlin, Berlin, Germany
- Bernstein Center for Computational Neuroscience, Berlin, Germany
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
| | - Valentin Schmutz
- Brain Mind Institute, School of Computer and Communication Sciences and School of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Tilo Schwalger
- Institute for Mathematics, Technische Universität Berlin, Berlin, Germany
- Bernstein Center for Computational Neuroscience, Berlin, Germany
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3
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Racz FS, Stylianou O, Mukli P, Eke A. Multifractal and Entropy-Based Analysis of Delta Band Neural Activity Reveals Altered Functional Connectivity Dynamics in Schizophrenia. Front Syst Neurosci 2020; 14:49. [PMID: 32792917 PMCID: PMC7394222 DOI: 10.3389/fnsys.2020.00049] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2020] [Accepted: 06/29/2020] [Indexed: 12/14/2022] Open
Abstract
Dynamic functional connectivity (DFC) was established in the past decade as a potent approach to reveal non-trivial, time-varying properties of neural interactions – such as their multifractality or information content –, that otherwise remain hidden from conventional static methods. Several neuropsychiatric disorders were shown to be associated with altered DFC, with schizophrenia (SZ) being one of the most intensely studied among such conditions. Here we analyzed resting-state electroencephalography recordings of 14 SZ patients and 14 age- and gender-matched healthy controls (HC). We reconstructed dynamic functional networks from delta band (0.5–4 Hz) neural activity and captured their spatiotemporal dynamics in various global network topological measures. The acquired network measure time series were made subject to dynamic analyses including multifractal analysis and entropy estimation. Besides group-level comparisons, we built a classifier to explore the potential of DFC features in classifying individual cases. We found stronger delta-band connectivity, as well as increased variance of DFC in SZ patients. Surrogate data testing verified the true multifractal nature of DFC in SZ, with patients expressing stronger long-range autocorrelation and degree of multifractality when compared to controls. Entropy analysis indicated reduced temporal complexity of DFC in SZ. When using these indices as features, an overall cross-validation accuracy surpassing 89% could be achieved in classifying individual cases. Our results imply that dynamic features of DFC such as its multifractal properties and entropy are potent markers of altered neural dynamics in SZ and carry significant potential not only in better understanding its pathophysiology but also in improving its diagnosis. The proposed framework is readily applicable for neuropsychiatric disorders other than schizophrenia.
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Affiliation(s)
| | | | - Peter Mukli
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Andras Eke
- Department of Physiology, Semmelweis University, Budapest, Hungary
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4
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Ponce-Alvarez A, Mochol G, Hermoso-Mendizabal A, de la Rocha J, Deco G. Cortical state transitions and stimulus response evolve along stiff and sloppy parameter dimensions, respectively. eLife 2020; 9:53268. [PMID: 32181740 PMCID: PMC7108864 DOI: 10.7554/elife.53268] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Accepted: 03/16/2020] [Indexed: 11/26/2022] Open
Abstract
Previous research showed that spontaneous neuronal activity presents sloppiness: the collective behavior is strongly determined by a small number of parameter combinations, defined as ‘stiff’ dimensions, while it is insensitive to many others (‘sloppy’ dimensions). Here, we analyzed neural population activity from the auditory cortex of anesthetized rats while the brain spontaneously transited through different synchronized and desynchronized states and intermittently received sensory inputs. We showed that cortical state transitions were determined by changes in stiff parameters associated with the activity of a core of neurons with low responses to stimuli and high centrality within the observed network. In contrast, stimulus-evoked responses evolved along sloppy dimensions associated with the activity of neurons with low centrality and displaying large ongoing and stimulus-evoked fluctuations without affecting the integrity of the network. Our results shed light on the interplay among stability, flexibility, and responsiveness of neuronal collective dynamics during intrinsic and induced activity.
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Affiliation(s)
- Adrian Ponce-Alvarez
- Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
| | - Gabriela Mochol
- Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
| | | | - Jaime de la Rocha
- Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain
| | - Gustavo Deco
- Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain.,Institució Catalana de la Recerca i Estudis Avançats (ICREA), Barcelona, Spain.,Department of Neuropsychology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.,School of Psychological Sciences, Monash University, Melbourne, Australia
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5
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Landau-Ginzburg theory of cortex dynamics: Scale-free avalanches emerge at the edge of synchronization. Proc Natl Acad Sci U S A 2018; 115:E1356-E1365. [PMID: 29378970 DOI: 10.1073/pnas.1712989115] [Citation(s) in RCA: 76] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Understanding the origin, nature, and functional significance of complex patterns of neural activity, as recorded by diverse electrophysiological and neuroimaging techniques, is a central challenge in neuroscience. Such patterns include collective oscillations emerging out of neural synchronization as well as highly heterogeneous outbursts of activity interspersed by periods of quiescence, called "neuronal avalanches." Much debate has been generated about the possible scale invariance or criticality of such avalanches and its relevance for brain function. Aimed at shedding light onto this, here we analyze the large-scale collective properties of the cortex by using a mesoscopic approach following the principle of parsimony of Landau-Ginzburg. Our model is similar to that of Wilson-Cowan for neural dynamics but crucially, includes stochasticity and space; synaptic plasticity and inhibition are considered as possible regulatory mechanisms. Detailed analyses uncover a phase diagram including down-state, synchronous, asynchronous, and up-state phases and reveal that empirical findings for neuronal avalanches are consistently reproduced by tuning our model to the edge of synchronization. This reveals that the putative criticality of cortical dynamics does not correspond to a quiescent-to-active phase transition as usually assumed in theoretical approaches but to a synchronization phase transition, at which incipient oscillations and scale-free avalanches coexist. Furthermore, our model also accounts for up and down states as they occur (e.g., during deep sleep). This approach constitutes a framework to rationalize the possible collective phases and phase transitions of cortical networks in simple terms, thus helping to shed light on basic aspects of brain functioning from a very broad perspective.
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6
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Bistability and up/down state alternations in inhibition-dominated randomly connected networks of LIF neurons. Sci Rep 2017; 7:11916. [PMID: 28931930 PMCID: PMC5607291 DOI: 10.1038/s41598-017-12033-y] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2017] [Accepted: 08/30/2017] [Indexed: 11/09/2022] Open
Abstract
Electrophysiological recordings in cortex in vivo have revealed a rich variety of dynamical regimes ranging from irregular asynchronous states to a diversity of synchronized states, depending on species, anesthesia, and external stimulation. The average population firing rate in these states is typically low. We study analytically and numerically a network of sparsely connected excitatory and inhibitory integrate-and-fire neurons in the inhibition-dominated, low firing rate regime. For sufficiently high values of the external input, the network exhibits an asynchronous low firing frequency state (L). Depending on synaptic time constants, we show that two scenarios may occur when external inputs are decreased: (1) the L state can destabilize through a Hopf bifucation as the external input is decreased, leading to synchronized oscillations spanning d δ to β frequencies; (2) the network can reach a bistable region, between the low firing frequency network state (L) and a quiescent one (Q). Adding an adaptation current to excitatory neurons leads to spontaneous alternations between L and Q states, similar to experimental observations on UP and DOWN states alternations.
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7
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Jercog D, Roxin A, Barthó P, Luczak A, Compte A, de la Rocha J. UP-DOWN cortical dynamics reflect state transitions in a bistable network. eLife 2017; 6:22425. [PMID: 28826485 PMCID: PMC5582872 DOI: 10.7554/elife.22425] [Citation(s) in RCA: 85] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2016] [Accepted: 07/21/2017] [Indexed: 11/21/2022] Open
Abstract
In the idling brain, neuronal circuits transition between periods of sustained firing (UP state) and quiescence (DOWN state), a pattern the mechanisms of which remain unclear. Here we analyzed spontaneous cortical population activity from anesthetized rats and found that UP and DOWN durations were highly variable and that population rates showed no significant decay during UP periods. We built a network rate model with excitatory (E) and inhibitory (I) populations exhibiting a novel bistable regime between a quiescent and an inhibition-stabilized state of arbitrarily low rate. Fluctuations triggered state transitions, while adaptation in E cells paradoxically caused a marginal decay of E-rate but a marked decay of I-rate in UP periods, a prediction that we validated experimentally. A spiking network implementation further predicted that DOWN-to-UP transitions must be caused by synchronous high-amplitude events. Our findings provide evidence of bistable cortical networks that exhibit non-rhythmic state transitions when the brain rests.
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Affiliation(s)
- Daniel Jercog
- Institut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain
| | - Alex Roxin
- Centre de Recerca Matemàtica, Bellaterra, Spain
| | - Peter Barthó
- MTA TTK NAP B Research Group of Sleep Oscillations, Budapest, Hungary
| | - Artur Luczak
- Canadian Center for Behavioural Neuroscience, University of Lethbridge, Lethbridge, Canada
| | - Albert Compte
- Institut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain
| | - Jaime de la Rocha
- Institut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain
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8
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Kim EJ, Hollerbach R. Geometric structure and information change in phase transitions. Phys Rev E 2017; 95:062107. [PMID: 28709324 DOI: 10.1103/physreve.95.062107] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2017] [Indexed: 11/07/2022]
Abstract
We propose a toy model for a cyclic order-disorder transition and introduce a geometric methodology to understand stochastic processes involved in transitions. Specifically, our model consists of a pair of forward and backward processes (FPs and BPs) for the emergence and disappearance of a structure in a stochastic environment. We calculate time-dependent probability density functions (PDFs) and the information length L, which is the total number of different states that a system undergoes during the transition. Time-dependent PDFs during transient relaxation exhibit strikingly different behavior in FPs and BPs. In particular, FPs driven by instability undergo the broadening of the PDF with a large increase in fluctuations before the transition to the ordered state accompanied by narrowing the PDF width. During this stage, we identify an interesting geodesic solution accompanied by the self-regulation between the growth and nonlinear damping where the time scale τ of information change is constant in time, independent of the strength of the stochastic noise. In comparison, BPs are mainly driven by the macroscopic motion due to the movement of the PDF peak. The total information length L between initial and final states is much larger in BPs than in FPs, increasing linearly with the deviation γ of a control parameter from the critical state in BPs while increasing logarithmically with γ in FPs. L scales as |lnD| and D^{-1/2} in FPs and BPs, respectively, where D measures the strength of the stochastic forcing. These differing scalings with γ and D suggest a great utility of L in capturing different underlying processes, specifically, diffusion vs advection in phase transition by geometry. We discuss physical origins of these scalings and comment on implications of our results for bistable systems undergoing repeated order-disorder transitions (e.g., fitness).
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Affiliation(s)
- Eun-Jin Kim
- School of Mathematics and Statistics, University of Sheffield, Sheffield S3 7RH, United Kingdom
| | - Rainer Hollerbach
- Department of Applied Mathematics, University of Leeds, Leeds LS2 9JT, United Kingdom
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9
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Information Geometry of Non-Equilibrium Processes in a Bistable System with a Cubic Damping. ENTROPY 2017. [DOI: 10.3390/e19060268] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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10
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Sase T, Katori Y, Komuro M, Aihara K. Bifurcation Analysis on Phase-Amplitude Cross-Frequency Coupling in Neural Networks with Dynamic Synapses. Front Comput Neurosci 2017; 11:18. [PMID: 28424606 PMCID: PMC5371682 DOI: 10.3389/fncom.2017.00018] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2016] [Accepted: 03/13/2017] [Indexed: 11/13/2022] Open
Abstract
We investigate a discrete-time network model composed of excitatory and inhibitory neurons and dynamic synapses with the aim at revealing dynamical properties behind oscillatory phenomena possibly related to brain functions. We use a stochastic neural network model to derive the corresponding macroscopic mean field dynamics, and subsequently analyze the dynamical properties of the network. In addition to slow and fast oscillations arising from excitatory and inhibitory networks, respectively, we show that the interaction between these two networks generates phase-amplitude cross-frequency coupling (CFC), in which multiple different frequency components coexist and the amplitude of the fast oscillation is modulated by the phase of the slow oscillation. Furthermore, we clarify the detailed properties of the oscillatory phenomena by applying the bifurcation analysis to the mean field model, and accordingly show that the intermittent and the continuous CFCs can be characterized by an aperiodic orbit on a closed curve and one on a torus, respectively. These two CFC modes switch depending on the coupling strength from the excitatory to inhibitory networks, via the saddle-node cycle bifurcation of a one-dimensional torus in map (MT1SNC), and may be associated with the function of multi-item representation. We believe that the present model might have potential for studying possible functional roles of phase-amplitude CFC in the cerebral cortex.
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Affiliation(s)
- Takumi Sase
- Graduate School of Information Science and Technology, The University of TokyoTokyo, Japan
| | - Yuichi Katori
- Institute of Industrial Science, The University of TokyoTokyo, Japan.,The School of Systems Information Science, Future University HakodateHokkaido, Japan
| | - Motomasa Komuro
- Center for Fundamental Education, Teikyo University of ScienceYamanashi, Japan
| | - Kazuyuki Aihara
- Graduate School of Information Science and Technology, The University of TokyoTokyo, Japan.,Institute of Industrial Science, The University of TokyoTokyo, Japan
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11
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Nonstationary Stochastic Dynamics Underlie Spontaneous Transitions between Active and Inactive Behavioral States. eNeuro 2017; 4:eN-NWR-0355-16. [PMID: 28374017 PMCID: PMC5370279 DOI: 10.1523/eneuro.0355-16.2017] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Revised: 02/16/2017] [Accepted: 02/22/2017] [Indexed: 11/21/2022] Open
Abstract
The neural basis of spontaneous movement generation is a fascinating open question. Long-term monitoring of fish, swimming freely in a constant sensory environment, has revealed a sequence of behavioral states that alternate randomly and spontaneously between periods of activity and inactivity. We show that key dynamical features of this sequence are captured by a 1-D diffusion process evolving in a nonlinear double well energy landscape, in which a slow variable modulates the relative depth of the wells. This combination of stochasticity, nonlinearity, and nonstationary forcing correctly captures the vastly different timescales of fluctuations observed in the data (∼1 to ∼1000 s), and yields long-tailed residence time distributions (RTDs) also consistent with the data. In fact, our model provides a simple mechanism for the emergence of long-tailed distributions in spontaneous animal behavior. We interpret the stochastic variable of this dynamical model as a decision-like variable that, upon reaching a threshold, triggers the transition between states. Our main finding is thus the identification of a threshold crossing process as the mechanism governing spontaneous movement initiation and termination, and to infer the presence of underlying nonstationary agents. Another important outcome of our work is a dimensionality reduction scheme that allows similar segments of data to be grouped together. This is done by first extracting geometrical features in the dataset and then applying principal component analysis over the feature space. Our study is novel in its ability to model nonstationary behavioral data over a wide range of timescales.
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12
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Pittorino F, Ibáñez-Berganza M, di Volo M, Vezzani A, Burioni R. Chaos and Correlated Avalanches in Excitatory Neural Networks with Synaptic Plasticity. PHYSICAL REVIEW LETTERS 2017; 118:098102. [PMID: 28306273 DOI: 10.1103/physrevlett.118.098102] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2016] [Indexed: 06/06/2023]
Abstract
A collective chaotic phase with power law scaling of activity events is observed in a disordered mean field network of purely excitatory leaky integrate-and-fire neurons with short-term synaptic plasticity. The dynamical phase diagram exhibits two transitions from quasisynchronous and asynchronous regimes to the nontrivial, collective, bursty regime with avalanches. In the homogeneous case without disorder, the system synchronizes and the bursty behavior is reflected into a period doubling transition to chaos for a two dimensional discrete map. Numerical simulations show that the bursty chaotic phase with avalanches exhibits a spontaneous emergence of persistent time correlations and enhanced Kolmogorov complexity. Our analysis reveals a mechanism for the generation of irregular avalanches that emerges from the combination of disorder and deterministic underlying chaotic dynamics.
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Affiliation(s)
- Fabrizio Pittorino
- Dipartimento di Scienze Matematiche, Fisiche e Informatiche, Università di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
- INFN, Gruppo Collegato di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
| | | | - Matteo di Volo
- Group for Neural Theory, Laboratoire de Neurosciences Cognitives, INSERM U960, École Normale Supérieure, Paris 75005, France
| | - Alessandro Vezzani
- Dipartimento di Scienze Matematiche, Fisiche e Informatiche, Università di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
- IMEM-CNR, Parco Area delle Scienze, 37/A-43124 Parma, Italy
| | - Raffaella Burioni
- Dipartimento di Scienze Matematiche, Fisiche e Informatiche, Università di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
- INFN, Gruppo Collegato di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
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13
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Uzuntarla M, Torres JJ, So P, Ozer M, Barreto E. Double inverse stochastic resonance with dynamic synapses. Phys Rev E 2017; 95:012404. [PMID: 28208458 DOI: 10.1103/physreve.95.012404] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Indexed: 06/06/2023]
Abstract
We investigate the behavior of a model neuron that receives a biophysically realistic noisy postsynaptic current based on uncorrelated spiking activity from a large number of afferents. We show that, with static synapses, such noise can give rise to inverse stochastic resonance (ISR) as a function of the presynaptic firing rate. We compare this to the case with dynamic synapses that feature short-term synaptic plasticity and show that the interval of presynaptic firing rate over which ISR exists can be extended or diminished. We consider both short-term depression and facilitation. Interestingly, we find that a double inverse stochastic resonance (DISR), with two distinct wells centered at different presynaptic firing rates, can appear.
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Affiliation(s)
- Muhammet Uzuntarla
- Department of Biomedical Engineering, Bulent Ecevit University, 67100 Zonguldak, Turkey
| | - Joaquin J Torres
- Department of Electromagnetism and Physics of the Matter and Institute Carlos I for Theoretical and Computational Physics, University of Granada, E-18071 Granada, Spain
| | - Paul So
- Department of Physics and Astronomy and the Krasnow Institute for Advanced Study, George Mason University, Fairfax, Virginia 22030, USA
| | - Mahmut Ozer
- Department of Electrical and Electronics Engineering, Bulent Ecevit University, 67100 Zonguldak, Turkey
| | - Ernest Barreto
- Department of Physics and Astronomy and the Krasnow Institute for Advanced Study, George Mason University, Fairfax, Virginia 22030, USA
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14
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Recio I, Torres J. Emergence of low noise frustrated states in E/I balanced neural networks. Neural Netw 2016; 84:91-101. [DOI: 10.1016/j.neunet.2016.08.010] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2016] [Revised: 07/24/2016] [Accepted: 08/23/2016] [Indexed: 12/21/2022]
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15
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di Santo S, Burioni R, Vezzani A, Muñoz MA. Self-Organized Bistability Associated with First-Order Phase Transitions. PHYSICAL REVIEW LETTERS 2016; 116:240601. [PMID: 27367373 DOI: 10.1103/physrevlett.116.240601] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2016] [Indexed: 05/21/2023]
Abstract
Self-organized criticality elucidates the conditions under which physical and biological systems tune themselves to the edge of a second-order phase transition, with scale invariance. Motivated by the empirical observation of bimodal distributions of activity in neuroscience and other fields, we propose and analyze a theory for the self-organization to the point of phase coexistence in systems exhibiting a first-order phase transition. It explains the emergence of regular avalanches with attributes of scale invariance that coexist with huge anomalous ones, with realizations in many fields.
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Affiliation(s)
- Serena di Santo
- Departamento de Electromagnetismo y Física de la Materia e Instituto Carlos I de Física Teórica y Computacional, Universidad de Granada, Granada E-18071, Spain
- Dipartimento di Fisica e Scienza della Terra, Università di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
- INFN, Gruppo Collegato di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
| | - Raffaella Burioni
- Dipartimento di Fisica e Scienza della Terra, Università di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
- INFN, Gruppo Collegato di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
| | - Alessandro Vezzani
- Dipartimento di Fisica e Scienza della Terra, Università di Parma, via G.P. Usberti, 7/A-43124 Parma, Italy
- IMEM-CNR, Parco Area delle Scienze, 37/A-43124 Parma, Italy
| | - Miguel A Muñoz
- Departamento de Electromagnetismo y Física de la Materia e Instituto Carlos I de Física Teórica y Computacional, Universidad de Granada, Granada E-18071, Spain
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16
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Gigante G, Deco G, Marom S, Del Giudice P. Network Events on Multiple Space and Time Scales in Cultured Neural Networks and in a Stochastic Rate Model. PLoS Comput Biol 2015; 11:e1004547. [PMID: 26558616 PMCID: PMC4641680 DOI: 10.1371/journal.pcbi.1004547] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2015] [Accepted: 08/28/2015] [Indexed: 11/19/2022] Open
Abstract
Cortical networks, in-vitro as well as in-vivo, can spontaneously generate a variety of collective dynamical events such as network spikes, UP and DOWN states, global oscillations, and avalanches. Though each of them has been variously recognized in previous works as expression of the excitability of the cortical tissue and the associated nonlinear dynamics, a unified picture of the determinant factors (dynamical and architectural) is desirable and not yet available. Progress has also been partially hindered by the use of a variety of statistical measures to define the network events of interest. We propose here a common probabilistic definition of network events that, applied to the firing activity of cultured neural networks, highlights the co-occurrence of network spikes, power-law distributed avalanches, and exponentially distributed 'quasi-orbits', which offer a third type of collective behavior. A rate model, including synaptic excitation and inhibition with no imposed topology, synaptic short-term depression, and finite-size noise, accounts for all these different, coexisting phenomena. We find that their emergence is largely regulated by the proximity to an oscillatory instability of the dynamics, where the non-linear excitable behavior leads to a self-amplification of activity fluctuations over a wide range of scales in space and time. In this sense, the cultured network dynamics is compatible with an excitation-inhibition balance corresponding to a slightly sub-critical regime. Finally, we propose and test a method to infer the characteristic time of the fatigue process, from the observed time course of the network's firing rate. Unlike the model, possessing a single fatigue mechanism, the cultured network appears to show multiple time scales, signalling the possible coexistence of different fatigue mechanisms.
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Affiliation(s)
- Guido Gigante
- Italian Institute of Health, Rome, Italy
- Mperience srl, Rome, Italy
| | - Gustavo Deco
- Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
- Institució Catalana de la Recerca i Estudis Avançats (ICREA), Universitat Pompeu Fabra, Passeig Lluís Companys 23, Barcelona, Spain
| | - Shimon Marom
- Technion - Israel Institute of Technology, Haifa Israel
| | - Paolo Del Giudice
- Italian Institute of Health, Rome, Italy
- Istituto Nazionale di Fisica Nucleare (INFN), Rome Italy
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17
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Wei W, Wolf F, Wang XJ. Impact of membrane bistability on dynamical response of neuronal populations. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:032726. [PMID: 26465517 DOI: 10.1103/physreve.92.032726] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2015] [Indexed: 06/05/2023]
Abstract
Neurons in many brain areas can develop a pronounced depolarized state of membrane potential (up state) in addition to the normal hyperpolarized state near the resting potential. The influence of the up state on signal encoding, however, is not well investigated. Here we construct a one-dimensional bistable neuron model and calculate the linear dynamical response to noisy oscillatory inputs analytically. We find that with the appearance of an up state, the transmission function is enhanced by the emergence of a local maximum at some optimal frequency and the phase lag relative to the input signal is reduced. We characterize the dependence of the enhancement of frequency response on intrinsic dynamics and on the occupancy of the up state.
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Affiliation(s)
- Wei Wei
- Center for Neural Science, New York University, New York, New York 10003, USA
- Department of Neurobiology and Kavli Institute for Neuroscience, Yale University School of Medicine, New Haven, Connecticut 06520, USA
| | - Fred Wolf
- Max Planck Institute for Dynamics and Self-Organization and Bernstein Center for Computational Neuroscience, D-37077 Göttingen, Germany
| | - Xiao-Jing Wang
- Center for Neural Science, New York University, New York, New York 10003, USA
- Department of Neurobiology and Kavli Institute for Neuroscience, Yale University School of Medicine, New Haven, Connecticut 06520, USA
- NYU-ECNU Institute of Brain and Cognitive Science, NYU Shanghai, Shanghai, China
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18
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Dao Duc K, Parutto P, Chen X, Epsztein J, Konnerth A, Holcman D. Synaptic dynamics and neuronal network connectivity are reflected in the distribution of times in Up states. Front Comput Neurosci 2015; 9:96. [PMID: 26283956 PMCID: PMC4518200 DOI: 10.3389/fncom.2015.00096] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2015] [Accepted: 07/13/2015] [Indexed: 11/13/2022] Open
Abstract
The dynamics of neuronal networks connected by synaptic dynamics can sustain long periods of depolarization that can last for hundreds of milliseconds such as Up states recorded during sleep or anesthesia. Yet the underlying mechanism driving these periods remain unclear. We show here within a mean-field model that the residence time of the neuronal membrane potential in cortical Up states does not follow a Poissonian law, but presents several peaks. Furthermore, the present modeling approach allows extracting some information about the neuronal network connectivity from the time distribution histogram. Based on a synaptic-depression model, we find that these peaks, that can be observed in histograms of patch-clamp recordings are not artifacts of electrophysiological measurements, but rather are an inherent property of the network dynamics. Analysis of the equations reveals a stable focus located close to the unstable limit cycle, delimiting a region that defines the Up state. The model further shows that the peaks observed in the Up state time distribution are due to winding around the focus before escaping from the basin of attraction. Finally, we use in vivo recordings of intracellular membrane potential and we recover from the peak distribution, some information about the network connectivity. We conclude that it is possible to recover the network connectivity from the distribution of times that the neuronal membrane voltage spends in Up states.
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Affiliation(s)
- Khanh Dao Duc
- IBENS, Ecole Normale Supérieure, Applied Mathematics and Computational Biology Paris, France
| | - Pierre Parutto
- IBENS, Ecole Normale Supérieure, Applied Mathematics and Computational Biology Paris, France
| | - Xiaowei Chen
- Institute of Neuroscience, Technische Universität München Munchen, Germany
| | - Jérôme Epsztein
- Institut de Neurobiologie de la Méditerranée-INSERM U901 Marseille, France
| | - Arthur Konnerth
- Institute of Neuroscience, Technische Universität München Munchen, Germany
| | - David Holcman
- IBENS, Ecole Normale Supérieure, Applied Mathematics and Computational Biology Paris, France
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19
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Stochastic transitions into silence cause noise correlations in cortical circuits. Proc Natl Acad Sci U S A 2015; 112:3529-34. [PMID: 25739962 DOI: 10.1073/pnas.1410509112] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The spiking activity of cortical neurons is highly variable. This variability is generally correlated among nearby neurons, an effect commonly interpreted to reflect the coactivation of neurons due to anatomically shared inputs. Recent findings, however, indicate that correlations can be dynamically modulated, suggesting that the underlying mechanisms are not well understood. Here, we investigate the hypothesis that correlations are dominated by neuronal coinactivation: the occurrence of brief silent periods during which all neurons in the local network stop firing. We recorded spiking activity from large populations of neurons in the auditory cortex of anesthetized rats across different brain states. During spontaneous activity, the reduction of correlation accompanying brain state desynchronization was largely explained by a decrease in the density of the silent periods. The presentation of a stimulus caused an initial drop of correlations followed by a rebound, a time course that was mimicked by the instantaneous silence density. We built a rate network model with fluctuation-driven transitions between a silent and an active attractor and assumed that neurons fired Poisson spike trains with a rate following the model dynamics. Variations of the network external input altered the transition rate into the silent attractor and reproduced the relation between correlation and silence density found in the data, both in spontaneous and evoked conditions. This suggests that the observed changes in correlation, occurring gradually with brain state variations or abruptly with sensory stimulation, are due to changes in the likeliness of the microcircuit to transiently cease firing.
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20
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Zhao X, Kim JW, Robinson PA. Slow-wave oscillations in a corticothalamic model of sleep and wake. J Theor Biol 2015; 370:93-102. [PMID: 25659479 DOI: 10.1016/j.jtbi.2015.01.028] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2014] [Revised: 01/21/2015] [Accepted: 01/24/2015] [Indexed: 11/27/2022]
Abstract
A physiologically-based corticothalamic neural field model is used to study slow wave oscillations including cortical UP and DOWN states in deep sleep by extending it to incorporate bursting dynamics of neurons in the thalamic reticular nucleus. The interplay of local bursting dynamics and network interactions produces the cortical UP and DOWN states of slow wave sleep while preserving previously verified model predictions in the wake state. Results show that EEG spectral features in wake and sleep are reproduced. The bursting is subthreshold but acts to intensify the amplitude of oscillations in slow wave sleep with deep UP/DOWN oscillations on the cortex emerging naturally. Furthermore, there is a continuous cycle between the two regimes, rather than a flip-flop between discrete states.
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Affiliation(s)
- X Zhao
- School of Physics, The University of Sydney, Sydney, New South Wales 2006, Australia; Center of Research Excellence, Neurosleep, 431 Glebe Point Rd, Glebe, New South Wales 2037, Australia; Center for Integrative Brain Function, University of Sydney, New South Wales 2006, Australia; Cooperative Research Center for Alertness, Safety, and Productivity, University of Sydney, New South Wales 2006, Australia.
| | - J W Kim
- School of Physics, The University of Sydney, Sydney, New South Wales 2006, Australia; Center of Research Excellence, Neurosleep, 431 Glebe Point Rd, Glebe, New South Wales 2037, Australia
| | - P A Robinson
- School of Physics, The University of Sydney, Sydney, New South Wales 2006, Australia; Center of Research Excellence, Neurosleep, 431 Glebe Point Rd, Glebe, New South Wales 2037, Australia; Center for Integrative Brain Function, University of Sydney, New South Wales 2006, Australia; Cooperative Research Center for Alertness, Safety, and Productivity, University of Sydney, New South Wales 2006, Australia
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21
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di Volo M, Burioni R, Casartelli M, Livi R, Vezzani A. Heterogeneous mean field for neural networks with short-term plasticity. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:022811. [PMID: 25215785 DOI: 10.1103/physreve.90.022811] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2014] [Indexed: 06/03/2023]
Abstract
We report about the main dynamical features of a model of leaky integrate-and-fire excitatory neurons with short-term plasticity defined on random massive networks. We investigate the dynamics by use of a heterogeneous mean-field formulation of the model that is able to reproduce dynamical phases characterized by the presence of quasisynchronous events. This formulation allows one to solve also the inverse problem of reconstructing the in-degree distribution for different network topologies from the knowledge of the global activity field. We study the robustness of this inversion procedure by providing numerical evidence that the in-degree distribution can be recovered also in the presence of noise and disorder in the external currents. Finally, we discuss the validity of the heterogeneous mean-field approach for sparse networks with a sufficiently large average in-degree.
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Affiliation(s)
- Matteo di Volo
- Dipartimento di Fisica e Scienza della Terra, Università di Parma, via G.P. Usberti, 7/A-43124, Parma, Italy and Centro Interdipartimentale per lo Studio delle Dinamiche Complesse, via Sansone, 1-50019 Sesto Fiorentino, Italy and INFN, Gruppo Collegato di Parma, via G.P. Usberti, 7/A-43124, Parma, Italy
| | - Raffaella Burioni
- Dipartimento di Fisica e Scienza della Terra, Università di Parma, via G.P. Usberti, 7/A-43124, Parma, Italy and INFN, Gruppo Collegato di Parma, via G.P. Usberti, 7/A-43124, Parma, Italy
| | - Mario Casartelli
- Dipartimento di Fisica e Scienza della Terra, Università di Parma, via G.P. Usberti, 7/A-43124, Parma, Italy and INFN, Gruppo Collegato di Parma, via G.P. Usberti, 7/A-43124, Parma, Italy
| | - Roberto Livi
- Centro Interdipartimentale per lo Studio delle Dinamiche Complesse, via Sansone, 1-50019 Sesto Fiorentino, Italy and Dipartimento di Fisica, Università di Firenze, via Sansone, 1-50019 Sesto Fiorentino, Italy and Istituto dei Sistemi Complessi, CNR, via Madonna del Piano 10-50019 Sesto Fiorentino, Italy and INFN Sez. Firenze, via Sansone, 1-50019 Sesto Fiorentino, Italy
| | - Alessandro Vezzani
- Dipartimento di Fisica e Scienza della Terra, Università di Parma, via G.P. Usberti, 7/A-43124, Parma, Italy and S3, CNR Istituto di Nanoscienze, Via Campi, 213A-41125 Modena, Italy
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22
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Moreno-Bote R. Poisson-like spiking in circuits with probabilistic synapses. PLoS Comput Biol 2014; 10:e1003522. [PMID: 25032705 PMCID: PMC4102400 DOI: 10.1371/journal.pcbi.1003522] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2013] [Accepted: 02/05/2014] [Indexed: 11/18/2022] Open
Abstract
Neuronal activity in cortex is variable both spontaneously and during stimulation, and it has the remarkable property that it is Poisson-like over broad ranges of firing rates covering from virtually zero to hundreds of spikes per second. The mechanisms underlying cortical-like spiking variability over such a broad continuum of rates are currently unknown. We show that neuronal networks endowed with probabilistic synaptic transmission, a well-documented source of variability in cortex, robustly generate Poisson-like variability over several orders of magnitude in their firing rate without fine-tuning of the network parameters. Other sources of variability, such as random synaptic delays or spike generation jittering, do not lead to Poisson-like variability at high rates because they cannot be sufficiently amplified by recurrent neuronal networks. We also show that probabilistic synapses predict Fano factor constancy of synaptic conductances. Our results suggest that synaptic noise is a robust and sufficient mechanism for the type of variability found in cortex. Neurons in cortex fire irregularly and in an irreproducible way under repeated presentations of an identical stimulus. Where is this spiking variability coming from? One unexplored possibility is that cortical variability originates from the amplification of a particular type of noise that is present throughout cortex: synaptic failures. In this paper we found that probabilistic synapses are sufficient to lead to cortical-like firing for several orders of magnitude in firing rate. Moreover, the resulting variability displays the property that variance of the spike counts is proportional to the mean for every cell in the network, the so-called Poisson-like firing, a well-known property of sensory cortical firing responses. We finally argue that far from being harmful, probabilistic synapses allow networks to sample neuronal states and sustain probabilistic population codes. Therefore, synaptic noise is not only a robust mechanism for the type of variability found in cortex, but it also provides cortical circuits with computational properties to perform probabilistic inference under noisy and ambiguous stimulation.
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Affiliation(s)
- Rubén Moreno-Bote
- Research Unit, Parc Sanitari Sant Joan de Déu and Universitat de Barcelona, Esplugues de Llobregat, Barcelona, Spain
- Centro de Investigación Biomédica en Red de Salud Mental (CIBERSAM), Esplugues de Llobregat, Barcelona, Spain
- * E-mail:
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23
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Kilpatrick ZP. Short term synaptic depression improves information transfer in perceptual multistability. Front Comput Neurosci 2013; 7:85. [PMID: 23847523 PMCID: PMC3696740 DOI: 10.3389/fncom.2013.00085] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2012] [Accepted: 06/13/2013] [Indexed: 11/13/2022] Open
Abstract
Competitive neural networks are often used to model the dynamics of perceptual bistability. Switching between percepts can occur through fluctuations and/or a slow adaptive process. Here, we analyze switching statistics in competitive networks with short term synaptic depression and noise. We start by analyzing a ring model that yields spatially structured solutions and complement this with a study of a space-free network whose populations are coupled with mutual inhibition. Dominance times arising from depression driven switching can be approximated using a separation of timescales in the ring and space-free model. For purely noise-driven switching, we derive approximate energy functions to justify how dominance times are exponentially related to input strength. We also show that a combination of depression and noise generates realistic distributions of dominance times. Unimodal functions of dominance times are more easily told apart by sampling, so switches induced by synaptic depression induced provide more information about stimuli than noise-driven switching. Finally, we analyze a competitive network model of perceptual tristability, showing depression generates a history-dependence in dominance switching.
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24
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Torres JJ, Kappen HJ. Emerging phenomena in neural networks with dynamic synapses and their computational implications. Front Comput Neurosci 2013; 7:30. [PMID: 23637657 PMCID: PMC3617396 DOI: 10.3389/fncom.2013.00030] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2012] [Accepted: 03/20/2013] [Indexed: 11/29/2022] Open
Abstract
In this paper we review our research on the effect and computational role of dynamical synapses on feed-forward and recurrent neural networks. Among others, we report on the appearance of a new class of dynamical memories which result from the destabilization of learned memory attractors. This has important consequences for dynamic information processing allowing the system to sequentially access the information stored in the memories under changing stimuli. Although storage capacity of stable memories also decreases, our study demonstrated the positive effect of synaptic facilitation to recover maximum storage capacity and to enlarge the capacity of the system for memory recall in noisy conditions. Possibly, the new dynamical behavior can be associated with the voltage transitions between up and down states observed in cortical areas in the brain. We investigated the conditions for which the permanence times in the up state are power-law distributed, which is a sign for criticality, and concluded that the experimentally observed large variability of permanence times could be explained as the result of noisy dynamic synapses with large recovery times. Finally, we report how short-term synaptic processes can transmit weak signals throughout more than one frequency range in noisy neural networks, displaying a kind of stochastic multi-resonance. This effect is due to competition between activity-dependent synaptic fluctuations (due to dynamic synapses) and the existence of neuron firing threshold which adapts to the incoming mean synaptic input.
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Affiliation(s)
- Joaquin J. Torres
- Granada Neurophysics Group at Institute “Carlos I” for Theoretical and Computational Physics, University of GranadaGranada, Spain
| | - Hilbert J. Kappen
- Donders Institute for Brain Cognition and Behaviour, Radboud University NijmegenNijmegen, Netherlands
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25
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Benita JM, Guillamon A, Deco G, Sanchez-Vives MV. Synaptic depression and slow oscillatory activity in a biophysical network model of the cerebral cortex. Front Comput Neurosci 2012; 6:64. [PMID: 22973221 PMCID: PMC3428579 DOI: 10.3389/fncom.2012.00064] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2012] [Accepted: 08/09/2012] [Indexed: 11/30/2022] Open
Abstract
Short-term synaptic depression (STD) is a form of synaptic plasticity that has a large impact on network computations. Experimental results suggest that STD is modulated by cortical activity, decreasing with activity in the network and increasing during silent states. Here, we explored different activity-modulation protocols in a biophysical network model for which the model displayed less STD when the network was active than when it was silent, in agreement with experimental results. Furthermore, we studied how trains of synaptic potentials had lesser decay during periods of activity (UP states) than during silent periods (DOWN states), providing new experimental predictions. We next tackled the inverse question of what is the impact of modifying STD parameters on the emergent activity of the network, a question difficult to answer experimentally. We found that synaptic depression of cortical connections had a critical role to determine the regime of rhythmic cortical activity. While low STD resulted in an emergent rhythmic activity with short UP states and long DOWN states, increasing STD resulted in longer and more frequent UP states interleaved with short silent periods. A still higher synaptic depression set the network into a non-oscillatory firing regime where DOWN states no longer occurred. The speed of propagation of UP states along the network was not found to be modulated by STD during the oscillatory regime; it remained relatively stable over a range of values of STD. Overall, we found that the mutual interactions between synaptic depression and ongoing network activity are critical to determine the mechanisms that modulate cortical emergent patterns.
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Affiliation(s)
- Jose M Benita
- Department of Applied Mathematics I - EPSEB, Universitat Politècnica de Catalunya Barcelona, Spain
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26
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Hidalgo J, Seoane LF, Cortés JM, Muñoz MA. Stochastic amplification of fluctuations in cortical up-states. PLoS One 2012; 7:e40710. [PMID: 22879879 PMCID: PMC3413692 DOI: 10.1371/journal.pone.0040710] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2012] [Accepted: 06/12/2012] [Indexed: 11/18/2022] Open
Abstract
Cortical neurons are bistable; as a consequence their local field potentials can fluctuate between quiescent and active states, generating slow Hz oscillations which are widely known as transitions between Up and Down States. Despite a large number of studies on Up-Down transitions, deciphering its nature, mechanisms and function are still today challenging tasks. In this paper we focus on recent experimental evidence, showing that a class of spontaneous oscillations can emerge within the Up states. In particular, a non-trivial peak around Hz appears in their associated power-spectra, what produces an enhancement of the activity power for higher frequencies (in the Hz band). Moreover, this rhythm within Ups seems to be an emergent or collective phenomenon given that individual neurons do not lock to it as they remain mostly unsynchronized. Remarkably, similar oscillations (and the concomitant peak in the spectrum) do not appear in the Down states. Here we shed light on these findings by using different computational models for the dynamics of cortical networks in presence of different levels of physiological complexity. Our conclusion, supported by both theory and simulations, is that the collective phenomenon of “stochastic amplification of fluctuations” – previously described in other contexts such as Ecology and Epidemiology – explains in an elegant and parsimonious manner, beyond model-dependent details, this extra-rhythm emerging only in the Up states but not in the Downs.
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Affiliation(s)
- Jorge Hidalgo
- Departamento de Electromagnetismo y Física de la Materia e Instituto de Física Teórica y Computacional Carlos I. Universidad de Granada, Granada, Spain
| | - Luís F. Seoane
- Bernstein Center for Computational Neuroscience, Technische Universität Berlin, Berlin, Germany
- Institut de Biologia Evolutiva, UPF-CSIC, Barcelona, Spain
| | - Jesús M. Cortés
- Departamento de Ciencias de la Computacion e Inteligencia Artificial, Universidad de Granada, Granada, Spain
| | - Miguel A. Muñoz
- Departamento de Electromagnetismo y Física de la Materia e Instituto de Física Teórica y Computacional Carlos I. Universidad de Granada, Granada, Spain
- * E-mail:
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27
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The phase response of the cortical slow oscillation. Cogn Neurodyn 2012; 6:367-75. [PMID: 24995052 DOI: 10.1007/s11571-012-9207-z] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2011] [Revised: 05/10/2012] [Accepted: 05/30/2012] [Indexed: 10/28/2022] Open
Abstract
Cortical slow oscillations occur in the mammalian brain during deep sleep and have been shown to contribute to memory consolidation, an effect that can be enhanced by electrical stimulation. As the precise underlying working mechanisms are not known it is desired to develop and analyze computational models of slow oscillations and to study the response to electrical stimuli. In this paper we employ the conductance based model of Compte et al. (J Neurophysiol 89:2707-2725, 2003) to study the effect of electrical stimulation. The population response to electrical stimulation depends on the timing of the stimulus with respect to the state of the slow oscillation. First, we reproduce the experimental results of electrical stimulation in ferret brain slices by Shu et al. (Nature 423:288-293, 2003) from the conductance based model. We then numerically obtain the phase response curve for the conductance based network model to quantify the network's response to weak stimuli. Our results agree with experiments in vivo and in vitro that show that sensitivity to stimulation is weaker in the up than in the down state. However, we also find that within the up state stimulation leads to a shortening of the up state, or phase advance, whereas during the up-down transition a prolongation of up states is possible, resulting in a phase delay. Finally, we compute the phase response curve for the simple mean-field model by Ngo et al. (EPL Europhys Lett 89:68002, 2010) and find that the qualitative shape of the PRC is preserved, despite its different mechanism for the generation of slow oscillations.
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28
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Exploring the spectrum of dynamical regimes and timescales in spontaneous cortical activity. Cogn Neurodyn 2011; 6:239-50. [PMID: 23730355 DOI: 10.1007/s11571-011-9179-4] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2011] [Revised: 10/11/2011] [Accepted: 10/17/2011] [Indexed: 10/16/2022] Open
Abstract
Rhythms at slow (<1 Hz) frequency of alternating Up and Down states occur during slow-wave sleep states, under deep anaesthesia and in cortical slices of mammals maintained in vitro. Such spontaneous oscillations result from the interplay between network reverberations nonlinearly sustained by a strong synaptic coupling and a fatigue mechanism inhibiting the neurons firing in an activity-dependent manner. Varying pharmacologically the excitability level of brain slices we exploit the network dynamics underlying slow rhythms, uncovering an intrinsic anticorrelation between Up and Down state durations. Besides, a non-monotonic change of Down state duration is also observed, which shrinks the distribution of the accessible frequencies of the slow rhythms. Attractor dynamics with activity-dependent self-inhibition predicts a similar trend even when the system excitability is reduced, because of a stability loss of Up and Down states. Hence, such cortical rhythms tend to display a maximal size of the distribution of Up/Down frequencies, envisaging the location of the system dynamics on a critical boundary of the parameter space. This would be an optimal solution for the system in order to display a wide spectrum of dynamical regimes and timescales.
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29
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Mejias JF, Torres JJ. Emergence of resonances in neural systems: the interplay between adaptive threshold and short-term synaptic plasticity. PLoS One 2011; 6:e17255. [PMID: 21408148 PMCID: PMC3050837 DOI: 10.1371/journal.pone.0017255] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2010] [Accepted: 01/25/2011] [Indexed: 11/18/2022] Open
Abstract
In this work we study the detection of weak stimuli by spiking (integrate-and-fire) neurons in the presence of certain level of noisy background neural activity. Our study has focused in the realistic assumption that the synapses in the network present activity-dependent processes, such as short-term synaptic depression and facilitation. Employing mean-field techniques as well as numerical simulations, we found that there are two possible noise levels which optimize signal transmission. This new finding is in contrast with the classical theory of stochastic resonance which is able to predict only one optimal level of noise. We found that the complex interplay between adaptive neuron threshold and activity-dependent synaptic mechanisms is responsible for this new phenomenology. Our main results are confirmed by employing a more realistic FitzHugh-Nagumo neuron model, which displays threshold variability, as well as by considering more realistic stochastic synaptic models and realistic signals such as poissonian spike trains.
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Affiliation(s)
- Jorge F Mejias
- Center for Neural Dynamics, University of Ottawa, Ottawa, Ontario, Canada.
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30
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de Franciscis S, Johnson S, Torres JJ. Enhancing neural-network performance via assortativity. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 83:036114. [PMID: 21517565 DOI: 10.1103/physreve.83.036114] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2010] [Revised: 01/27/2011] [Indexed: 05/30/2023]
Abstract
The performance of attractor neural networks has been shown to depend crucially on the heterogeneity of the underlying topology. We take this analysis a step further by examining the effect of degree-degree correlations--assortativity--on neural-network behavior. We make use of a method recently put forward for studying correlated networks and dynamics thereon, both analytically and computationally, which is independent of how the topology may have evolved. We show how the robustness to noise is greatly enhanced in assortative (positively correlated) neural networks, especially if it is the hub neurons that store the information.
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Affiliation(s)
- Sebastiano de Franciscis
- Departamento de Electromagnetismo y Física de la Materia, and Institute Carlos I for Theoretical and Computational Physics, and Facultad de Ciencias, University of Granada, E-18071 Granada, Spain.
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