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Selena Shen KL, Cheow JJ, Cheung AB, Koh RJR, Koh Xiao Mun A, Lee YN, Lim YZ, Namatame M, Peng E, Vintenbakh V, Lim EX, Wainwright BJ. DNA barcoding continues to identify endangered species of shark sold as food in a globally significant shark fin trade hub. PeerJ 2024; 12:e16647. [PMID: 38188178 PMCID: PMC10771092 DOI: 10.7717/peerj.16647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Accepted: 11/20/2023] [Indexed: 01/09/2024] Open
Abstract
Shark fins are a delicacy consumed throughout Southeast Asia. The life history characteristics of sharks and the challenges associated with regulating fisheries and the fin trade make sharks particularly susceptible to overfishing. Here, we used DNA barcoding techniques to investigate the composition of the shark fin trade in Singapore, a globally significant trade hub. We collected 505 shark fin samples from 25 different local seafood and Traditional Chinese Medicine shops. From this, we identified 27 species of shark, three species are listed as Critically Endangered, four as Endangered and ten as Vulnerable by the International Union for Conservation of Nature (IUCN). Six species are listed on CITES Appendix II, meaning that trade must be controlled in order to avoid utilization incompatible with their survival. All dried fins collected in this study were sold under the generic term "shark fin"; this vague labelling prevents accurate monitoring of the species involved in the trade, the effective implementation of policy and conservation strategy, and could unwittingly expose consumers to unsafe concentrations of toxic metals. The top five most frequently encountered species in this study are Rhizoprionodon acutus, Carcharhinus falciformis, Galeorhinus galeus, Sphyrna lewini and Sphyrna zygaena. Accurate labelling that indicates the species of shark that a fin came from, along with details of where it was caught, allows consumers to make an informed choice on the products they are consuming. Doing this could facilitate the avoidance of species that are endangered, and similarly the consumer can choose not to purchase species that are documented to contain elevated concentrations of toxic metals.
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Affiliation(s)
| | - Jin Jie Cheow
- Yale-NUS College, National University of Singapore, Singapore
| | | | | | | | - Yun Ning Lee
- Yale-NUS College, National University of Singapore, Singapore
| | - Yan Zhen Lim
- Yale-NUS College, National University of Singapore, Singapore
| | - Maya Namatame
- Yale-NUS College, National University of Singapore, Singapore
| | - Eileen Peng
- Yale-NUS College, National University of Singapore, Singapore
- Yale University, New Haven, CT, USA
| | | | - Elisa X.Y. Lim
- Yale-NUS College, National University of Singapore, Singapore
| | - Benjamin John Wainwright
- Yale-NUS College, National University of Singapore, Singapore
- Department of Biological Sciences, National University of Singapore, Singapore
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2
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Ristori T, Thuret R, Hooker E, Quicke P, Lanthier K, Ntumba K, Aspalter IM, Uroz M, Herbert SP, Chen CS, Larrivée B, Bentley K. Bmp9 regulates Notch signaling and the temporal dynamics of angiogenesis via Lunatic Fringe. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.09.25.557123. [PMID: 37808725 PMCID: PMC10557600 DOI: 10.1101/2023.09.25.557123] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/10/2023]
Abstract
In brief The mechanisms regulating the signaling pathways involved in angiogenesis are not fully known. Ristori et al. show that Lunatic Fringe (LFng) mediates the crosstalk between Bone Morphogenic Protein 9 (Bmp9) and Notch signaling, thereby regulating the endothelial cell behavior and temporal dynamics of their identity during sprouting angiogenesis. Highlights Bmp9 upregulates the expression of LFng in endothelial cells.LFng regulates the temporal dynamics of tip/stalk selection and rearrangement.LFng indicated to play a role in hereditary hemorrhagic telangiectasia.Bmp9 and LFng mediate the endothelial cell-pericyte crosstalk.Bone Morphogenic Protein 9 (Bmp9), whose signaling through Activin receptor-like kinase 1 (Alk1) is involved in several diseases, has been shown to independently activate Notch target genes in an additive fashion with canonical Notch signaling. Here, by integrating predictive computational modeling validated with experiments, we uncover that Bmp9 upregulates Lunatic Fringe (LFng) in endothelial cells (ECs), and thereby also regulates Notch activity in an inter-dependent, multiplicative fashion. Specifically, the Bmp9-upregulated LFng enhances Notch receptor activity creating a much stronger effect when Dll4 ligands are also present. During sprouting, this LFng regulation alters vessel branching by modulating the timing of EC phenotype selection and rearrangement. Our results further indicate that LFng can play a role in Bmp9-related diseases and in pericyte-driven vessel stabilization, since we find LFng contributes to Jag1 upregulation in Bmp9-stimulated ECs; thus, Bmp9-upregulated LFng results in not only enhanced EC Dll4-Notch1 activation, but also Jag1-Notch3 activation in pericytes.
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3
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Establishment of a rapid method for skipjack tuna (Katsuwonus pelamis) authentication using molecular beacons in loop-mediated isothermal amplification. Food Chem 2022; 382:132365. [DOI: 10.1016/j.foodchem.2022.132365] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 01/21/2022] [Accepted: 02/04/2022] [Indexed: 11/20/2022]
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4
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Ryburn SJ, Ballantine WM, Loncan FM, Manning OG, Alston MA, Steinwand B, Bruno JF. Public awareness of seafood mislabeling. PeerJ 2022; 10:e13486. [PMID: 35782099 PMCID: PMC9248779 DOI: 10.7717/peerj.13486] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2022] [Accepted: 05/03/2022] [Indexed: 01/17/2023] Open
Abstract
A substantial portion of seafood is mislabeled, causing significant impacts to human health, the environment, the economy, and society. Despite the large scientific literature documenting seafood mislabeling the public's awareness of seafood mislabeling is unknown. We conducted an online survey to assess the public's awareness and perceptions of seafood mislabeling. Of the 1,216 respondents, 38% had never heard of seafood mislabeling and 49% were only 'vaguely familiar' with it. After being provided the definition of seafood mislabeling 95% had some degree of concern. Respondents were the most concerned about environmental impacts caused by seafood mislabeling and the least concerned about the social justice implications. Respondents who were also more concerned and familiar with seafood mislabeling stated that they would be more likely to purchase seafood from a vendor where the labeling was independently verified.
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Affiliation(s)
- Savannah J. Ryburn
- Environment, Ecology and Energy Program, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States
| | - Wilker M. Ballantine
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States
| | - Florencia M. Loncan
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States
| | - Olivia G. Manning
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States
| | - Meggan A. Alston
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States
| | - Blaire Steinwand
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States,Department of Zoology, The University of British Columbia, Vancouver, British Columbia, Canada
| | - John F. Bruno
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States
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6
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Consumers of mislabeled tropical fish exhibit increased risks of ciguatera intoxication: A report on substitution patterns in fish imported at Frankfurt Airport, Germany. Food Control 2021. [DOI: 10.1016/j.foodcont.2020.107647] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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7
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Using real time fluorescence loop-mediated isothermal amplification for rapid species authentication of Atlantic salmon (Salmo salar). J Food Compost Anal 2021. [DOI: 10.1016/j.jfca.2020.103659] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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8
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Chen X, Fu M, Xu W, Huang M, Cui X, Cao M, Xiong X, Xiong X. One‐step triplex high‐resolution melting (HRM) analysis for rapid identification of Atlantic cod (
Gadus morhua
), Alaska pollock (
Gadus chalcogrammus
) and haddock (
Melanogrammus aeglefinus
). Int J Food Sci Technol 2020. [DOI: 10.1111/ijfs.14924] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Xiaoye Chen
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
| | - Mingyang Fu
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
| | - Wenjie Xu
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
| | - Manhong Huang
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
| | - Xiaowen Cui
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
| | - Min Cao
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
| | - Xiaohui Xiong
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
| | - Xiong Xiong
- College of Food Science and Light Industry Nanjing Tech University Nanjing211800China
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Wallstrom MA, Morris KA, Carlson LV, Marko PB. Seafood mislabeling in Honolulu, Hawai’i. FORENSIC SCIENCE INTERNATIONAL: REPORTS 2020. [DOI: 10.1016/j.fsir.2020.100154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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10
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Spencer ET, Richards E, Steinwand B, Clemons J, Dahringer J, Desai P, Fisher M, Fussell S, Gorman O, Jones D, Le A, Long K, McMahan C, Moscarito C, Pelay C, Price E, Smith A, VanSant A, Bruno JF. A high proportion of red snapper sold in North Carolina is mislabeled. PeerJ 2020; 8:e9218. [PMID: 32617188 PMCID: PMC7321663 DOI: 10.7717/peerj.9218] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2019] [Accepted: 04/28/2020] [Indexed: 11/20/2022] Open
Abstract
Seafood mislabeling occurs when a market label is inaccurate, primarily in terms of species identity, but also regarding weight, geographic origin, or other characteristics. This widespread problem allows cheaper or illegally-caught species to be marketed as species desirable to consumers. Previous studies have identified red snapper (Lutjanus campechanus) as one of the most frequently mislabeled seafood species in the United States. To quantify how common mislabeling of red snapper is across North Carolina, the Seafood Forensics class at the University of North Carolina at Chapel Hill used DNA barcoding to analyze samples sold as "red snapper" from restaurants, seafood markets, and grocery stores purchased in ten counties. Of 43 samples successfully sequenced and identified, 90.7% were mislabeled. Only one grocery store chain (of four chains tested) accurately labeled red snapper. The mislabeling rate for restaurants and seafood markets was 100%. Vermilion snapper (Rhomboplites aurorubens) and tilapia (Oreochromis aureus and O. niloticus) were the species most frequently substituted for red snapper (13 of 39 mislabeled samples for both taxa, or 26 of 39 mislabeled total). This study builds on previous mislabeling research by collecting samples of a specific species in a confined geographic region, allowing local vendors and policy makers to better understand the scope of red snapper mislabeling in North Carolina. This methodology is also a model for other academic institutions to engage undergraduate researchers in mislabeling data collection, sample processing, and analysis.
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Affiliation(s)
- Erin T Spencer
- Environment, Ecology, and Energy Program, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Emilie Richards
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Blaire Steinwand
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Juliette Clemons
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Jessica Dahringer
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Priya Desai
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Morgan Fisher
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Sloane Fussell
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Olivia Gorman
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Diamond Jones
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Amanda Le
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Kayla Long
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Cammie McMahan
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Caitlin Moscarito
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Catherine Pelay
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Erica Price
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Anna Smith
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - Allison VanSant
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
| | - John F Bruno
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America
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11
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Korzik ML, Austin HM, Cooper B, Jasperse C, Tan G, Richards E, Spencer ET, Steinwand B, Fodrie FJ, Bruno JF. Marketplace shrimp mislabeling in North Carolina. PLoS One 2020; 15:e0229512. [PMID: 32163430 PMCID: PMC7067418 DOI: 10.1371/journal.pone.0229512] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Accepted: 02/09/2020] [Indexed: 11/21/2022] Open
Abstract
Seafood mislabeling occurs in a wide range of seafood products worldwide, resulting in public distrust, economic fraud, and health risks for consumers. We quantified the extent of shrimp mislabeling in coastal and inland North Carolina. We used standard DNA barcoding procedures to determine the species identity of 106 shrimp sold as “local” by 60 vendors across North Carolina. Thirty-four percent of the purchased shrimp was mislabeled, and surprisingly the percentage did not differ significantly between coastal and inland counties. One third of product incorrectly marketed as “local” was in fact whiteleg shrimp: an imported and globally farmed species native to the eastern Pacific, not found in North Carolina waters. In addition to the negative ecosystem consequences of shrimp farming (e.g., the loss of mangrove forests and the coastal buffering they provide), North Carolina fishers—as with local fishers elsewhere—are negatively impacted when vendors label farmed, frozen, and imported shrimp as local, fresh, and wild-caught.
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Affiliation(s)
- Morgan L. Korzik
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Hannah M. Austin
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Brittany Cooper
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Caroline Jasperse
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Grace Tan
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Emilie Richards
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Erin T. Spencer
- Environment, Ecology, and Energy Program, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - Blaire Steinwand
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
| | - F. Joel Fodrie
- Institute of Marine Sciences, The University of North Carolina at Chapel Hill, Morehead City, North Carolina, United States of America
| | - John F. Bruno
- The Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America
- * E-mail:
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12
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Gin LE, Rowland AA, Steinwand B, Bruno J, Corwin LA. Students Who Fail to Achieve Predefined Research Goals May Still Experience Many Positive Outcomes as a Result of CURE Participation. CBE LIFE SCIENCES EDUCATION 2018; 17:ar57. [PMID: 30417757 PMCID: PMC6755884 DOI: 10.1187/cbe.18-03-0036] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Course-based undergraduate research experiences (CUREs) provide students opportunities to engage in research in a course. Aspects of CURE design, such as providing students opportunities to make discoveries, collaborate, engage in relevant work, and iterate to solve problems are thought to contribute to outcome achievement in CUREs. Yet how each of these elements contributes to specific outcomes is largely unexplored. This lack of understanding is problematic, because we may unintentionally underemphasize important aspects of CURE design that allow for achievement of highly valued outcomes when designing or teaching our courses. In this work, we take a qualitative approach and leverage unique circumstances in two offerings of a CURE to investigate how these design elements influence outcome achievement. One offering experienced many research challenges that increased engagement in iteration. This level of research challenge ultimately prevented achievement of predefined research goals. In the other offering, students experienced fewer research challenges and ultimately achieved predefined research goals. Our results suggest that, when students encounter research challenges and engage in iteration, they have the potential to increase their ability to navigate scientific obstacles. In addition, our results suggest roles for collaboration and autonomy, or directing one's own work, in outcome achievement.
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Affiliation(s)
- Logan E. Gin
- Biology Education Research Lab, School of Life Sciences, Arizona State University, Tempe, AZ 85287
| | - Ashley A. Rowland
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Boulder, CO 80309
| | - Blaire Steinwand
- Department of Biology, University of North Carolina, Chapel Hill, Chapel Hill, NC 27599
| | - John Bruno
- Department of Biology, University of North Carolina, Chapel Hill, Chapel Hill, NC 27599
| | - Lisa A. Corwin
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Boulder, CO 80309
- *Address correspondence to: Lisa A. Corwin ()
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13
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Wainwright BJ, Ip YCA, Neo ML, Chang JJM, Gan CZ, Clark-Shen N, Huang D, Rao M. DNA barcoding of traded shark fins, meat and mobulid gill plates in Singapore uncovers numerous threatened species. CONSERV GENET 2018. [DOI: 10.1007/s10592-018-1108-1] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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14
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Van Holt T, Weisman W, Käll S, Crona B, Vergara R. What does popular media have to tell us about the future of seafood? Ann N Y Acad Sci 2018; 1421:46-61. [PMID: 29727023 DOI: 10.1111/nyas.13613] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Revised: 01/03/2018] [Accepted: 01/08/2018] [Indexed: 11/27/2022]
Abstract
We examined ∼300 newspaper and business-oriented articles published over a 10-year period to assess trends in how seafood "sustainability" is talked about. We mapped key concepts relating to seafood sustainability as the word was used. We asked if the reports provided evidence that perceptions of problems or solutions for sustainability in seafood have changed over time. What were emergent areas of interest, and what concepts relevant to sustainable fisheries and seafood were absent in the reports? The number of reports concerning sustainability that focused on the middle of the supply chain (e.g., primary processors and importers) increased over time; certification was cited as both part of sustainability problems and a solution. We observed very little change over time in the kinds of fishery and seafood problems reported in the media sampled; themes consistently focused on environmental aspects of fisheries (social wellbeing aspects did not appear in the sample as linked with the term "sustainability"); and very few media reports on sustainable seafood cited aquaculture as a solution. We discuss the gap between what many researchers may perceive as the state-of-the-art of ideas and communication in seafood sustainability, and what appeared empirically in media during the period under study.
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Affiliation(s)
| | | | - Sofia Käll
- Kungliga Vetenskapsakademien-Global Economic Dynamics and the Biosphere Program, Stockholm, Sweden
| | - Beatrice Crona
- Kungliga Vetenskapsakademien-Global Economic Dynamics and the Biosphere Program, Stockholm, Sweden
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DNA barcoding reveals substitution of Sablefish (Anoplopoma fimbria) with Patagonian and Antarctic Toothfish (Dissostichus eleginoides and Dissostichus mawsoni) in online market in China: How mislabeling opens door to IUU fishing. Food Control 2016. [DOI: 10.1016/j.foodcont.2016.06.010] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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