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Uzaki M, Mori T, Sato M, Wakazaki M, Takeda-Kamiya N, Yamamoto K, Murakami A, Guerrero DAS, Shichijo C, Ohnishi M, Ishizaki K, Fukaki H, O'Connor SE, Toyooka K, Mimura T, Hirai MY. Integration of cell differentiation and initiation of monoterpenoid indole alkaloid metabolism in seed germination of Catharanthus roseus. THE NEW PHYTOLOGIST 2024; 242:1156-1171. [PMID: 38513692 DOI: 10.1111/nph.19662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 02/22/2024] [Indexed: 03/23/2024]
Abstract
In Catharanthus roseus, monoterpenoid indole alkaloids (MIAs) are produced through the cooperation of four cell types, with final products accumulating in specialized cells known as idioblasts and laticifers. To explore the relationship between cellular differentiation and cell type-specific MIA metabolism, we analyzed the expression of MIA biosynthesis in germinating seeds. Embryos from immature and mature seeds were observed via stereomicroscopy, fluorescence microscopy, and electron microscopy. Time-series MIA and iridoid quantification, along with transcriptome analysis, were conducted to determine the initiation of MIA biosynthesis. In addition, the localization of MIAs was examined using alkaloid staining and imaging mass spectrometry (IMS). Laticifers were present in embryos before seed maturation. MIA biosynthesis commenced 12 h after germination. MIAs accumulated in laticifers of embryos following seed germination, and MIA metabolism is induced after germination in a tissue-specific manner. These findings suggest that cellular morphological differentiation precedes metabolic differentiation. Considering the well-known toxicity and defense role of MIAs in matured plants, MIAs may be an important defense strategy already in the delicate developmental phase of seed germination, and biosynthesis and accumulation of MIAs may require the tissue and cellular differentiation.
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Affiliation(s)
- Mai Uzaki
- Graduate School of Bioagricultural Science, Nagoya University, Nagoya, Aichi, 464-8601, Japan
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan
| | - Tetsuya Mori
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan
| | - Mayuko Sato
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan
| | - Mayumi Wakazaki
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan
| | - Noriko Takeda-Kamiya
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan
| | - Kotaro Yamamoto
- School of Science, Yokohama City University, Yokohama, Kanagawa, 236-0027, Japan
| | - Akio Murakami
- Graduate School of Science, Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Delia Ayled Serna Guerrero
- Department of Natural Product Biosynthesis, Max Planck Institute for Chemical Ecology, Jena, D-07745, Germany
| | - Chizuko Shichijo
- Graduate School of Science, Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Miwa Ohnishi
- Graduate School of Science, Kobe University, Kobe, Hyogo, 657-8501, Japan
- Graduate School of Science, Kyoto University, Kyoto, 606-8502, Japan
| | - Kimitsune Ishizaki
- Graduate School of Science, Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Hidehiro Fukaki
- Graduate School of Science, Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Sarah E O'Connor
- Department of Natural Product Biosynthesis, Max Planck Institute for Chemical Ecology, Jena, D-07745, Germany
| | - Kiminori Toyooka
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan
| | - Tetsuro Mimura
- Graduate School of Science, Kobe University, Kobe, Hyogo, 657-8501, Japan
- College of Bioscience and Biotechnology, National Cheng Kung University, Tainan, 70101, Taiwan
- The Institute for Sustainable Agro-ecosystem Services, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 188-0002, Japan
- Faculty of Bioenvironmental Sciences, Kyoto University of Advanced Science, Kyoto, 621-8555, Japan
| | - Masami Yokota Hirai
- Graduate School of Bioagricultural Science, Nagoya University, Nagoya, Aichi, 464-8601, Japan
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan
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2
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Franzolin MR, Lopes IS, Courrol DDS, de Souza Barreto S, Courrol LC. Synthesis, characterization, antimicrobial activity, and toxicity evaluation of aminolevulinic acid-silver and silver-iron nanoparticles for potential applications in agriculture. RSC Adv 2022; 12:30094-30103. [PMID: 36329930 PMCID: PMC9585435 DOI: 10.1039/d2ra05135d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Accepted: 10/13/2022] [Indexed: 11/06/2022] Open
Abstract
Aminolevulinic acid (ALA) is considered one of the most critical plants growth regulators and essential precursors for chlorophyll biosynthesis; besides, its photodynamic activity can be used to exterminate larvae and microorganisms in plants and soil. Silver nanoparticles (AgNPs) have unique physicochemical properties and potent antimicrobial, antiviral, and antifungal activities, and in agriculture, their application as nanopesticides has been proposed. In this study, silver and silver–iron nanoparticles capped/stabilized with aminolevulinic acid (ALAAgNPs and ALAAgFeNPs) were synthesized by the photoreduction method and characterized by UV-vis spectroscopy, transmission electron microscopy, and zeta potential analysis. The kinetics of 1O2 generation from ALAAgFeNPs were obtained. The ALANP toxicity was evaluated on stalks of E. densa by observing cell morphology changes and measuring chlorophyll content compared with water-treated plants. Antimicrobial activity was tested against E. coli, P. aeruginosa, and Candida albicans. The results suggested that ALANPs (prepared with [AgNO3] ≤ 0.2 mM and [ALA] ≤ 0.4 mM) could be suitable for applications in the agricultural sector. The presence of ∼0.3 mmol of iron in ALAAgNPs synthesis increased cell uptake and chlorophyll synthesis. ALA is a natural metabolite in all living cells and possesses low toxicity. ALANPs exhibit high antimicrobial activity, promote plant growth and have the potential to show photodynamic herbicidal properties under solar illumination.![]()
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Affiliation(s)
| | - Isabela Santos Lopes
- Instituto de Ciências Ambientais, Químicas e Farmacêuticas, Departamento de Física, Universidade Federal de São PauloDiademaSão PauloBrazil
| | | | | | - Lilia Coronato Courrol
- Instituto de Ciências Ambientais, Químicas e Farmacêuticas, Departamento de Física, Universidade Federal de São PauloDiademaSão PauloBrazil
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3
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Uzaki M, Yamamoto K, Murakami A, Fuji Y, Ohnishi M, Ishizaki K, Fukaki H, Hirai MY, Mimura T. Differential regulation of fluorescent alkaloid metabolism between idioblast and lacticifer cells during leaf development in Catharanthus roseus seedlings. JOURNAL OF PLANT RESEARCH 2022; 135:473-483. [PMID: 35243587 DOI: 10.1007/s10265-022-01380-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Accepted: 02/04/2022] [Indexed: 06/14/2023]
Abstract
Bioactive specialized (secondary) metabolites are indispensable for plant development or adjustment to their surrounding environment. In many plants, these specialized metabolites are accumulated in specifically differentiated cells. Catharanthus roseus is a well-known medicinal plant known for producing many kinds of monoterpenoid indole alkaloids (MIAs). C. roseus has two types of specifically differentiated cells accumulating MIAs, so-called idioblast cells and laticifer cells. In this study, we compared each of the cells as they changed during seedling growth, and found that the fluorescent metabolites accumulated in these cells were differentially regulated. Analysis of fluorescent compounds revealed that the fluorescence observed in these cells was emitted from the compound serpentine. Further, we found that the serpentine content of leaves increased as leaves grew. Our findings suggest that idioblast cells and laticifer cells have different biological roles in MIA biosynthesis and its regulation.
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Affiliation(s)
- Mai Uzaki
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan
- Department of Applied Biosciences, Graduate School of Bioagricultural Science, Nagoya University, Nagoya, Japan
- RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Japan
| | - Kotaro Yamamoto
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan
- Department of Natural Product Biosynthesis, Max Planck Institute for Chemical Ecology, Jena, Germany
- Graduate School of Pharmaceutical Sciences, Chiba University, Chiba, Japan
| | - Akio Murakami
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan
| | - Yushiro Fuji
- RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Japan
| | - Miwa Ohnishi
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan
- Department of Botany, Graduate School of Science, Kyoto University, Kyoto, Japan
| | - Kimitsune Ishizaki
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan
| | - Hidehiro Fukaki
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan
| | - Masami Yokota Hirai
- Department of Applied Biosciences, Graduate School of Bioagricultural Science, Nagoya University, Nagoya, Japan.
- RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Japan.
| | - Tetsuro Mimura
- Department of Biology, Graduate School of Science, Kobe University, Kobe, Japan.
- College of Bioscience and Biotechnology, National Cheng-Kung University, No.1, University Road, 701, Tainan City, Taiwan.
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Guedes JG, Guimarães AL, Carqueijeiro I, Gardner R, Bispo C, Sottomayor M. Isolation of Specialized Plant Cells by Fluorescence-Activated Cell Sorting. Methods Mol Biol 2022; 2469:193-200. [PMID: 35508840 DOI: 10.1007/978-1-0716-2185-1_16] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Plant organs are built of different cell types, characterized by specific transcription programs and metabolic profiles. The possibility of isolation of such cell types to perform differential transcriptomic, proteomic and metabolomic analyses is highly important to understand many aspects of plant physiology, namely, the structure and regulation of economically valuable specialized metabolic pathways. Here, we describe the isolation of idioblast leaf protoplasts of the medicinal plant Catharanthus roseus by fluorescence-activated cell sorting, taking advantage of the differential autofluorescence properties of those specialized cells.
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Affiliation(s)
- Joana G Guedes
- Biomedical Sciences Institute Abel Salazar, University of Porto, Porto, Portugal
- Investigation Center in Biodiversity and Genetic Resources, Universidade do Porto, Vairão, Portugal
| | | | - Inês Carqueijeiro
- EA2106 Plant Biomolecules and Biotechnology, University of Tours, Tours, France
| | - Rui Gardner
- Memorial Sloan-Kettering Cancer Center, New York, NY, USA
- Gulbenkian Science Institute, Oeiras, Portugal
| | - Cláudia Bispo
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
- UCSF Parnassus Flow CoLab, San Francisco, CA, USA
| | - Mariana Sottomayor
- CIBIO/InBIO-Centro de Investigação em Biodiversidade e Recursos Genéticos, University of Porto, Vairão, Portugal.
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
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Baranova EN, Chaban IA, Kurenina LV, Konovalova LN, Varlamova NV, Khaliluev MR, Gulevich AA. Possible Role of Crystal-Bearing Cells in Tomato Fertility and Formation of Seedless Fruits. Int J Mol Sci 2020; 21:E9480. [PMID: 33322169 PMCID: PMC7763322 DOI: 10.3390/ijms21249480] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Revised: 12/07/2020] [Accepted: 12/11/2020] [Indexed: 11/23/2022] Open
Abstract
Crystal-bearing cells or idioblasts, which deposit calcium oxalate, are located in various tissues and organs of many plant species. The functional significance of their formation is currently unclear. Idioblasts in the leaf parenchyma and the development of crystal-bearing cells in the anther tissues of transgenic tomato plants (Solanum lycopersicon L.), expressing the heterologous FeSOD gene and which showed a decrease in fertility, were studied by transmission and scanning electron microscopy. The amount of calcium oxalate crystals was found to increase significantly in the transgenic plants compared to the wild type (WT) ones in idioblasts and crystal-bearing cells of the upper part of the anther. At the same time, changes in the size and shape of the crystals and their location in anther organs were noted. It seems that the interruption in the break of the anther stomium in transgenic plants was associated with the formation and cell death regulation of a specialized group of crystal-bearing cells. This disturbance caused an increase in the pool of these cells and their localization in the upper part of the anther, where rupture is initiated. Perturbations were also noted in the lower part of the anther in transgenic plants, where the amount of calcium oxalate crystals in crystal-bearing cells was reduced that was accompanied by disturbances in the morphology of pollen grains. Thus, the induction of the formation of crystal-bearing cells and calcium oxalate crystals can have multidirectional effects, contributing to the regulation of oxalate metabolism in the generative and vegetative organs and preventing fertility when the ROS balance changes, in particular, during oxidative stresses accompanying most abiotic and biotic environmental factors.
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Affiliation(s)
- Ekaterina N. Baranova
- Plant Protection Laboratory, N.V. Tsitsin Main Botanical Garden of Russian Academy of Sciences, 127276 Moscow, Russia;
- Cell Biology Laboratory, All-Russian Scientific Research Institute of Agricultural Biotechnology, 127550 Moscow, Russia;
| | - Inna A. Chaban
- Cell Biology Laboratory, All-Russian Scientific Research Institute of Agricultural Biotechnology, 127550 Moscow, Russia;
| | - Ludmila V. Kurenina
- Plant Cell Engineering Laboratory, All-Russian Scientific Research Institute of Agricultural Biotechnology, 127550 Moscow, Russia; (L.V.K.); (N.V.V.); (M.R.K.)
| | - Ludmila N. Konovalova
- Plant Protection Laboratory, N.V. Tsitsin Main Botanical Garden of Russian Academy of Sciences, 127276 Moscow, Russia;
- Cell Biology Laboratory, All-Russian Scientific Research Institute of Agricultural Biotechnology, 127550 Moscow, Russia;
| | - Natalia V. Varlamova
- Plant Cell Engineering Laboratory, All-Russian Scientific Research Institute of Agricultural Biotechnology, 127550 Moscow, Russia; (L.V.K.); (N.V.V.); (M.R.K.)
| | - Marat R. Khaliluev
- Plant Cell Engineering Laboratory, All-Russian Scientific Research Institute of Agricultural Biotechnology, 127550 Moscow, Russia; (L.V.K.); (N.V.V.); (M.R.K.)
- Agronomy and Biotechnology Faculty, Moscow Timiryazev Agricultural Academy, Russian State Agrarian University, Timiryazevskaya 49, 127550 Moscow, Russia
| | - Alexander A. Gulevich
- Plant Cell Engineering Laboratory, All-Russian Scientific Research Institute of Agricultural Biotechnology, 127550 Moscow, Russia; (L.V.K.); (N.V.V.); (M.R.K.)
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6
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Han S, Maberly SC, Gontero B, Xing Z, Li W, Jiang H, Huang W. Structural basis for C4 photosynthesis without Kranz anatomy in leaves of the submerged freshwater plant Ottelia alismoides. ANNALS OF BOTANY 2020; 125:869-879. [PMID: 31942934 PMCID: PMC7218808 DOI: 10.1093/aob/mcaa005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Accepted: 01/14/2020] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND AIMS Ottelia alismoides (Hydrocharitaceae) is a freshwater macrophyte that, unusually, possesses three different CO2-concentrating mechanisms. Here we describe its leaf anatomy and chloroplast ultrastructure, how these are altered by CO2 concentration and how they may underlie C4 photosynthesis. METHODS Light and transmission electron microscopy were used to study the anatomy of mature leaves of O. alismoides grown at high and low CO2 concentrations. Diel acid change and the activity of phosphoenolpyruvate carboxylase were measured to confirm that CAM activity and C4 photosynthesis were present. KEY RESULTS When O. alismoides was grown at low CO2, the leaves performed both C4 and CAM photosynthesis whereas at high CO2 leaves used C4 photosynthesis. The leaf comprised an upper and lower layer of epidermal cells separated by a large air space occupying about 22 % of the leaf transverse-section area, and by mesophyll cells connecting the two epidermal layers. Kranz anatomy was absent. At low CO2, chloroplasts in the mesophyll cells were filled with starch even at the start of the photoperiod, while epidermal chloroplasts contained small starch grains. The number of chloroplasts in the epidermis was greater than in the mesophyll cells. At high CO2, the structure was unchanged but the thicknesses of the two epidermal layers, the air space, mesophyll and the transverse-section area of cells and air space were greater. CONCLUSIONS Leaves of O. alismoides have epidermal and mesophyll cells that contain chloroplasts and large air spaces but lack Kranz anatomy. The high starch content of mesophyll cells suggests they may benefit from an internal source of CO2, for example via C4 metabolism, and are also sites of starch storage. The air spaces may help in the recycling of decarboxylated or respired CO2. The structural similarity of leaves at low and high CO2 is consistent with the constitutive nature of bicarbonate and C4 photosynthesis. There is sufficient structural diversity within the leaf of O. alismoides to support dual-cell C4 photosynthesis even though Kranz anatomy is absent.
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Affiliation(s)
- Shijuan Han
- Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Stephen C Maberly
- Lake Ecosystems Group, UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Bailrigg, Lancaster, UK
| | - Brigitte Gontero
- Aix Marseille Univ CNRS, BIP UMR, IMM, FR, Chemin Joseph Aiguier, Marseille Cedex, France
| | - Zhenfei Xing
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China
| | - Wei Li
- Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan, China
| | - Hongsheng Jiang
- Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
| | - Wenmin Huang
- Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- Aix Marseille Univ CNRS, BIP UMR, IMM, FR, Chemin Joseph Aiguier, Marseille Cedex, France
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7
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Shirakawa M, Hara-Nishimura I. Specialized Vacuoles of Myrosin Cells: Chemical Defense Strategy in Brassicales Plants. PLANT & CELL PHYSIOLOGY 2018; 59:1309-1316. [PMID: 29897512 DOI: 10.1093/pcp/pcy082] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Accepted: 04/13/2018] [Indexed: 05/20/2023]
Abstract
Plant vacuoles display many versatile functions. Vacuoles in vegetative tissues are generally involved in protein degradation, and are called lytic vacuoles. However, vegetative vacuoles in specialized cells can accumulate large concentrations of proteins, such as those in idioblast myrosin cells along veins in the order Brassicales, which store large amounts of myrosinases (thioglucoside glucohydrolase and thioglucoside glucohydrolase). Myrosinases cleave the bond between sulfur and glucose in sulfur-rich compounds (glucosinolates) to produce toxic compounds (isothiocyanates) when plants are damaged by pests. This defense strategy is called the myrosinase-glucosinolate system. Recent studies identified atypical myrosinases, PENETRATION 2 (PEN2) and PYK10, along with key components for development of myrosin cells. In this review, we discuss three topics in the myrosinase-glucosinolate system. First, we summarize the complexity and importance of the myrosinase-glucosinolate system, including classical myrosinases, atypical myrosinases and the system that counteracts the myrosinase-glucosinolate system. Secondly, we describe molecular machineries underlying myrosin cell development, including specific reporters, cell lineage, cell differentiation and cell fate determination. The master regulators for myrosin cell differentiation, FAMA and SCREAM, are key transcription factors involved in guard cell differentiation. This indicates that myrosin cells and guard cells share similar transcriptional networks. Finally, we hypothesize that the myrosinase-glucosinolate system may have originated in stomata of ancestral Brassicales plants and, after that, plants co-opted this defense strategy into idioblasts near veins at inner tissue layers.
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Affiliation(s)
- Makoto Shirakawa
- Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Japan
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8
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Colinas M, Goossens A. Combinatorial Transcriptional Control of Plant Specialized Metabolism. TRENDS IN PLANT SCIENCE 2018; 23:324-336. [PMID: 29395832 DOI: 10.1016/j.tplants.2017.12.006] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2017] [Revised: 12/14/2017] [Accepted: 12/21/2017] [Indexed: 05/23/2023]
Abstract
Plants produce countless specialized compounds of diverse chemical nature and biological activities. Their biosynthesis often exclusively occurs either in response to environmental stresses or is limited to dedicated anatomical structures. In both scenarios, regulation of biosynthesis appears to be mainly controlled at the transcriptional level, which is generally dependent on a combined interplay of DNA-related mechanisms and the activity of transcription factors that may act in a combinatorial manner. How environmental and developmental cues are integrated into a coordinated cell type-specific stress response has only partially been unraveled so far. Building on the available examples from (metabolic) gene expression, here we propose theoretical models of how this integration of signals may occur at the level of transcriptional control.
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Affiliation(s)
- Maite Colinas
- Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 927, B-9052 Ghent, Belgium; VIB Center for Plant Systems Biology, Technologiepark 927, B-9052 Ghent, Belgium
| | - Alain Goossens
- Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 927, B-9052 Ghent, Belgium; VIB Center for Plant Systems Biology, Technologiepark 927, B-9052 Ghent, Belgium.
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9
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Stopka SA, Khattar R, Agtuca BJ, Anderton CR, Paša-Tolić L, Stacey G, Vertes A. Metabolic Noise and Distinct Subpopulations Observed by Single Cell LAESI Mass Spectrometry of Plant Cells in situ. FRONTIERS IN PLANT SCIENCE 2018; 9:1646. [PMID: 30498504 PMCID: PMC6250120 DOI: 10.3389/fpls.2018.01646] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2018] [Accepted: 10/23/2018] [Indexed: 05/18/2023]
Abstract
Phenotypic variations and stochastic expression of transcripts, proteins, and metabolites in biological tissues lead to cellular heterogeneity. As a result, distinct cellular subpopulations emerge. They are characterized by different metabolite expression levels and by associated metabolic noise distributions. To capture these biological variations unperturbed, highly sensitive in situ analytical techniques are needed that can sample tissue embedded single cells with minimum sample preparation. Optical fiber-based laser ablation electrospray ionization mass spectrometry (f-LAESI-MS) is a promising tool for metabolic profiling of single cells under ambient conditions. Integration of this MS-based platform with fluorescence and brightfield microscopy provides the ability to target single cells of specific type and allows for the selection of rare cells, e.g., excretory idioblasts. Analysis of individual Egeria densa leaf blade cells (n = 103) by f-LAESI-MS revealed significant differences between the prespecified subpopulations of epidermal cells (n = 97) and excretory idioblasts (n = 6) that otherwise would have been masked by the population average. Primary metabolites, e.g., malate, aspartate, and ascorbate, as well as several glucosides were detected in higher abundance in the epidermal cells. The idioblasts contained lipids, e.g., PG(16:0/18:2), and triterpene saponins, e.g., medicoside I and azukisaponin I, and their isomers. Metabolic noise for the epidermal cells were compared to results for soybean (Glycine max) root nodule cells (n = 60) infected by rhizobia (Bradyrhizobium japonicum). Whereas some primary metabolites showed lower noise in the latter, both cell types exhibited higher noise for secondary metabolites. Post hoc grouping of epidermal and root nodule cells, based on the abundance distributions for certain metabolites (e.g., malate), enabled the discovery of cellular subpopulations characterized by different mean abundance values, and the magnitudes of the corresponding metabolic noise. Comparison of prespecified populations from epidermal cells of the closely related E. densa (n = 20) and Elodea canadensis (n = 20) revealed significant differences, e.g., higher sugar content in the former and higher levels of ascorbate in the latter, and the presence of species-specific metabolites. These results demonstrate that the f-LAESI-MS single cell analysis platform has the potential to explore cellular heterogeneity and metabolic noise for hundreds of tissue-embedded cells.
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Affiliation(s)
- Sylwia A. Stopka
- Department of Chemistry, The George Washington University, Washington, DC, United States
- *Correspondence: Sylwia A. Stopka, ; orcid.org/0000-0003-3761-6899 Akos Vertes, ; orcid.org/0000-0001-5186-5352
| | - Rikkita Khattar
- Department of Chemistry, The George Washington University, Washington, DC, United States
| | - Beverly J. Agtuca
- Divisions of Plant Sciences and Biochemistry, C. S. Bond Life Sciences Center, University of Missouri, Columbia, MO, United States
| | - Christopher R. Anderton
- Environmental Molecular Sciences Laboratory, Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, United States
| | - Ljiljana Paša-Tolić
- Environmental Molecular Sciences Laboratory, Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, United States
| | - Gary Stacey
- Divisions of Plant Sciences and Biochemistry, C. S. Bond Life Sciences Center, University of Missouri, Columbia, MO, United States
| | - Akos Vertes
- Department of Chemistry, The George Washington University, Washington, DC, United States
- *Correspondence: Sylwia A. Stopka, ; orcid.org/0000-0003-3761-6899 Akos Vertes, ; orcid.org/0000-0001-5186-5352
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10
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Fujiwara MT, Kobayashi E, Kanazawa M, Itoh RD. Observation of Colorless Idioblasts in Egeria densa Leaves by Conventional Ultraviolet-Excitation Fluorescence Microscopy. CYTOLOGIA 2015. [DOI: 10.1508/cytologia.80.131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
| | | | | | - Ryuuichi D. Itoh
- Department of Chemistry, Biology and Marine Science, Faculty of Science, University of the Ryukyus
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