Warmer and wetter conditions will reduce offspring production of hawksbill turtles in Brazil under climate change

Gonadal Morphology of Stillborn Hawksbill Sea Turtle (Eretmochelys imbricata) Hatchlings

This study aimed to investigate sexual dimorphism in stillborn hawksbill sea turtles (Eretmochelys imbricata) through gonadal morphological characterizations. Macroscopic, light microscopy, and transmission electron analyses were performed for 30 gonad-mesonephros complexes. Female gonads were spindle-shaped and present a translucent whitish appearance with a grainy texture. Male gonads were approximately ovoid with a smooth opaque white surface. A primary sexual difference concerns different marrow structures, with females presenting organized cellularity featuring oocytes, lacunae, and blood vessels, while males presented a distinct organizational medulla pattern marked by testicular cords extending throughout the gonad length. Ultrastructurally, female's stroma presented interstitial cells and an abundant cytoplasm rich in electrodense droplets and large oval germline cells, with a conspicuous and noncentral nucleus. Males, on the other hand, presented testicular cord cells containing small amounts of heterochromatin and approximately triangular apical and basal cytoplasms with an evident nucleolus characteristic of support cells. Additionally, there were cells with a large spherical nucleus compared with the cell size and a relatively scarce cytoplasm, identified as gonocytes. These findings indicate that macroscopic, microscopic, and ultrastructural evaluations are effective and reliable techniques for the sexual identification of stillborn E. imbricata hatchlings.

The State of Squamate Genomics: Past, Present, and Future of Genome Research in the Most Speciose Terrestrial Vertebrate Order

Squamates include more than 11,000 extant species of lizards, snakes, and amphisbaenians, and display a dazzling diversity of phenotypes across their over 200-million-year evolutionary history on Earth. Here, we introduce and define squamates (Order Squamata) and review the history and promise of genomic investigations into the patterns and processes governing squamate evolution, given recent technological advances in DNA sequencing, genome assembly, and evolutionary analysis. We survey the most recently available whole genome assemblies for squamates, including the taxonomic distribution of available squamate genomes, and assess their quality metrics and usefulness for research. We then focus on disagreements in squamate phylogenetic inference, how methods of high-throughput phylogenomics affect these inferences, and demonstrate the promise of whole genomes to settle or sustain persistent phylogenetic arguments for squamates. We review the role transposable elements play in vertebrate evolution, methods of transposable element annotation and analysis, and further demonstrate that through the understanding of the diversity, abundance, and activity of transposable elements in squamate genomes, squamates can be an ideal model for the evolution of genome size and structure in vertebrates. We discuss how squamate genomes can contribute to other areas of biological research such as venom systems, studies of phenotypic evolution, and sex determination. Because they represent more than 30% of the living species of amniote, squamates deserve a genome consortium on par with recent efforts for other amniotes (i.e., mammals and birds) that aim to sequence most of the extant families in a clade.

Extreme conditions reduce hatching success of green turtles (Chelonia mydas L.) at Karan Island, the major nesting site in the Arabian Gulf

Survival in the early life stages is a major factor determining the growth and stability of wildlife populations. For sea turtles, nest location must provide favorable conditions to support embryonic development. Hatching success and incubation environment of green turtle eggs were examined in July 2019 at Karan Island, a major nesting site for the species in the Arabian Gulf. Mean hatching success averaged at 38.8 % (range = 2.5-75.0 %, n = 14). Eggs that suffered early embryonic death (EED) and late embryonic death (LED) represented 19.8 % (range: 3.3-64.2 %) and 41.4 % (range: 4.8-92.6 %) of the clutch on average, respectively. Nest sand was either coarse (0.5-1 mm: mean 44.8 %, range = 30.4-56.9 % by dry weight, n = 14) or medium (0.25-0.5 mm: mean 33.6 %, range = 12.0-45.5 % by dry weight, n = 14). Mean sand moisture (4.0 %, range = 3.2-4.9 %, n = 14) was at the lower margin for successful development. Hatching success was significantly higher in clutches with sand salinity <1500 EC.uS/cm (n = 5) than those above 2500 EC.uS/cm (n = 5). Mean clutch temperatures at 1200 h increased by an average of 5.4 °C during the 50-d post-oviposition from 31.2 °C to 36.6 °C. Embryos experienced lethally high temperatures in addition to impacts of other environmental factors (salinity, moisture, sand grain size), which was related to reduced hatching success. Conservation initiatives must consider the synergistic influence of the above parameters in formulating strategies to improve the overall resilience of the green turtle population in the Arabian Gulf to anthropogenic and climate change-related stressors.

Incorporating distance metrics and temporal trends to refine mixed stock analysis

The distribution of marine organisms is shaped by geographic distance and oceanographic features like currents. Among migratory species, individuals from multiple populations may share feeding habitats seasonally or across life stages. Here, we introduce a modification for many-to-many mixed stock models to include distance between breeding and foraging sites as an ecological covariate and evaluate how the composition of green turtle, Chelonia mydas, juvenile mixed stock aggregations changed in response to population growth over time. Our modified many-to-many model is more informative and generally tightens credible intervals over models that do not incorporate distance. Moreover, we identified a decrease in genetic diversity in a Florida nesting site and two juvenile aggregations. Mixed stock aggregations in central Florida have changed from multiple sources to fewer dominant source populations over the past ~ 20 years. We demonstrate that shifts in contributions from source populations to mixed stock aggregations are likely associated with nesting population growth. Furthermore, our results highlight the importance of long-term monitoring and the need for periodical reassessment of reproductive populations and juvenile aggregations. Understanding how mixed stock aggregations change over time and how different life stages are connected is fundamental for the development of successful conservation plans for imperiled species.

Climate change and marine turtles: recent advances and future directions

Climate change is a threat to marine turtles that is expected to affect all of their life stages. To guide future research, we conducted a review of the most recent literature on this topic, highlighting knowledge gains and research gaps since a similar previous review in 2009. Most research has been focussed on the terrestrial life history phase, where expected impacts will range from habitat loss and decreased reproductive success to feminization of populations, but changes in reproductive periodicity, shifts in latitudinal ranges, and changes in foraging success are all expected in the marine life history phase. Models have been proposed to improve estimates of primary sex ratios, while technological advances promise a better understanding of how climate can influence different life stages and habitats. We suggest a number of research priorities for an improved understanding of how climate change may impact marine turtles, including: improved estimates of primary sex ratios, assessments of the implications of female-biased sex ratios and reduced male production, assessments of the variability in upper thermal limits of clutches, models of beach sediment movement under sea level rise, and assessments of impacts on foraging grounds. Lastly, we suggest that it is not yet possible to recommend manipulating aspects of turtle nesting ecology, as the evidence base with which to understand the results of such interventions is not robust enough, but that strategies for mitigation of stressors should be helpful, providing they consider the synergistic effects of climate change and other anthropogenic-induced threats to marine turtles, and focus on increasing resilience.

Population Viability of Sea Turtles in the Context of Global Warming

Sea turtles present a model for the potential impacts of climate change on imperiled species, with projected warming generating concern about their persistence. Various sea turtle life-history traits are affected by temperature; most strikingly, warmer egg incubation temperatures cause female-biased sex ratios and higher embryo mortality. Predictions of sea turtle resilience to climate change are often focused on how resulting male limitation or reduced offspring production may affect populations. In the present article, by reviewing research on sea turtles, we provide an overview of how temperature impacts on incubating eggs may cascade through life history to ultimately affect population viability. We explore how sex-specific patterns in survival and breeding periodicity determine the differences among offspring, adult, and operational sex ratios. We then discuss the implications of skewed sex ratios for male-limited reproduction, consider the negative correlation between sex ratio skew and genetic diversity, and examine consequences for adaptive potential. Our synthesis underscores the importance of considering the effects of climate throughout the life history of any species. Lethal effects (e.g., embryo mortality) are relatively direct impacts, but sublethal effects at immature life-history stages may not alter population growth rates until cohorts reach reproductive maturity. This leaves a lag during which some species transition through several stages subject to distinct biological circumstances and climate impacts. These perspectives will help managers conceptualize the drivers of emergent population dynamics and identify existing knowledge gaps under different scenarios of predicted environmental change.

Effects of constant and fluctuating incubation temperatures on hatching success and hatchling traits in the diamondback terrapin (Malaclemys terrapin) in the context of the warming climate

As global temperatures continue to rise, so too will the nest temperatures of many species of turtles. Yet for most turtle species, including the estuarine diamondback terrapin (Malaclemys terrapin), there is limited information on embryonic sensitivity to elevated temperature. We incubated eggs of M. terrapin at three, mean temperatures (31, 34, 37 °C) under two thermal exposure regimes (constant or semi-naturally fluctuating temperature) and measured hatching success, developmental rate, and hatchling size. Hatching success was 100% at 31 °C and 67% at 34 °C, respectively; at 37 °C, all eggs failed early in the incubation period. These values were unaffected by exposure regime. The modeled LT₅₀ (temperature that was lethal to 50% of the test population) was 34.0 °C in the constant and 34.2 °C in the fluctuating thermal regime, reflecting a steep decline in survival between 33 and 35 °C. Hatchlings having been incubated at a constant 34 °C hatched sooner than those incubated at 31 °C under either constant or fluctuating temperature. Hatchlings were smaller in straight carapace length (CL) and width after having been incubated at 34 °C compared to 31 °C. Larger (CL) hatchlings resulted from fluctuating temperature conditions relative to constant temperature conditions, regardless of mean temperature. Based upon recent temperatures in natural nests, the M. terrapin population studied here appears to possess resiliency to several degrees of elevated mean nest temperatures, beyond which, embryonic mortality will likely sharply increase. When considered within the mosaic of challenges that Maryland's M. terrapin face as the climate warms, including ongoing habitat losses due to sea level rise and impending thermal impacts on bioenergetics and offspring sex ratios, a future increase in embryonic mortality could be a critical factor for a population already experiencing ecological and physiological challenges due to climate change.

The impact of sand moisture on the temperature-sex ratio responses of developing loggerhead (Caretta caretta) sea turtles

All species of sea turtles exhibit a cooler male/warmer female temperature-sex ratio response. Field and experimental studies on loggerhead sea turtle sex ratios suggest that increased sand moisture impacts sea turtle sex ratios with, and perhaps beyond, a cooling effect. This study examines how varying sand moisture impacts the embryo's response to temperature. Across three years, loggerhead (Caretta caretta) sea turtle eggs were incubated at temperatures ranging from 28.0°C to 33.0°C. Groups of eggs were incubated in one of three volumetric moisture contents: low, medium, or high. Temperatures inside the group of eggs were recorded throughout incubation. Hatchlings were raised for 2-3 months and sex was identified laparoscopically. We calculated temperature response curves for groups of eggs incubated at each moisture level. Pivotal temperatures did not different among eggs incubated in different sand moistures. The transitional ranges of temperatures (TRT) for eggs incubated in high moisture and low moisture were narrower than the TRT for eggs incubated in medium moisture. The results of this study are crucial for understanding how sea turtle embryos respond to temperature directly or indirectly under different moisture conditions. Current sex ratio predictions rely on the embryos response to temperature only and may inaccurately estimate sex ratios especially during periods of heavy rainfall or drought.

Drought-induced Suppression of Female Fecundity in a Capital Breeder

Human-induced global climate change is exerting increasingly strong selective pressures on a myriad of fitness traits that affect organisms. These traits, in turn, are influenced by a variety of environmental parameters such as temperature and precipitation, particularly in ectothermic taxa such as amphibians and reptiles. Over the past several decades, severe and prolonged episodes of drought are becoming commonplace throughout North America. Documentation of responses to this environmental crisis, however, is often incomplete, particularly in cryptic species. Here, we investigated reproduction in a population of pitviper snakes (copperhead, Agkistrodon contortrix), a live-bearing capital breeder. This population experienced a severe drought from 2012 through 2016. We tested whether declines in number of progeny were linked to this drought. Decline in total number offspring was significant, but offspring length and mass were unaffected. Reproductive output was positively impacted by precipitation and negatively impacted by high temperatures. We hypothesized that severe declines of prey species (e.g., cicada, amphibians, and small mammals) reduced energy acquisition during drought, negatively impacting reproductive output of the snakes. Support for this view was found using the periodical cicada (Magicicada spp.) as a proxy for prey availability. Various climate simulations, including our own qualitative analysis, predict that drought events will continue unabated throughout the geographic distribution of copperheads which suggests that long-term monitoring of populations are needed to better understand geographic variation in drought resilience and cascading impacts of drought phenomena on ecosystem function.

A Review of the Effects of Climate Change on Chelonians

Climate change is occurring at an unprecedented rate and has begun to modify the distribution and phenology of organisms worldwide. Chelonians are expected to be particularly vulnerable due to limited dispersal capabilities as well as widespread temperature-dependent sex determination. The number of papers published about the effects of climate change on turtles has increased exponentially over the last decade; here, I review the data from peer-reviewed publications to assess the likely impacts of climate change on individuals, populations, and communities. Based upon these studies future research should focus on: (1) Individual responses to climate change, particularly with respect to thermal biology, phenology, and microhabitat selection; (2) improving species distribution models by incorporating fine-scale environmental variables as well as physiological processes; (3) identifying the consequences of skewed sex ratios; and (4) assessments of community resilience and the development of methods to mitigate climate change impacts. Although detailed management recommendations are not possible at this point, careful consideration should be given regarding how to manage low vagility species as habitats shift poleward. In the worst-case scenario, proactive management may be required in order to ensure that widespread losses do not occur.

Effects of local climate on loggerhead hatchling production in Brazil: Implications from climate change

Sea turtle eggs are heavily influenced by the environment in which they incubate, including effects on hatching success and hatchling viability (hatchling production). It is crucial to understand how the hatchling production of sea turtles is influenced by local climate and how potential changes in climate may impact future hatchling production. Generalized Additive Models were used to determine the relationship of six climatic variables at different temporal scales on loggerhead turtle (Caretta caretta) hatchling production at seventeen nesting beaches in Bahia, Espirito Santo, and Rio de Janeiro, Brazil. Using extreme and conservative climate change scenarios throughout the 21^st century, potential impacts on future hatching success (the number of hatched eggs in a nest) were predicted using the climatic variable(s) that best described hatchling production at each nesting beach. Air temperature and precipitation were found to be the main drivers of hatchling production throughout Brazil. CMIP5 climate projections are for a warming of air temperature at all sites throughout the 21^st century, while projections for precipitation vary regionally. The more tropical nesting beaches in Brazil, such as those in Bahia, are projected to experience declines in hatchling production, while the more temperate nesting beaches, such as those in Rio de Janeiro, are projected to experience increases in hatchling production by the end of the 21^st century.