Solving text clustering problem using a memetic differential evolution algorithm

An augmented Snake Optimizer for diseases and COVID-19 diagnosis

Feature Selection (FS) techniques extract the most recognizable features for improving the performance of classification methods for medical applications. In this paper, two intelligent wrapper FS approaches based on a new metaheuristic algorithm named the Snake Optimizer (SO) are introduced. The binary SO, called BSO, is built based on an S-shape transform function to handle the binary discrete values in the FS domain. To improve the exploration of the search space by BSO, three evolutionary crossover operators (i.e., one-point crossover, two-point crossover, and uniform crossover) are incorporated and controlled by a switch probability. The two newly developed FS algorithms, BSO and BSO-CV, are implemented and assessed on a real-world COVID-19 dataset and 23 disease benchmark datasets. According to the experimental results, the improved BSO-CV significantly outperformed the standard BSO in terms of accuracy and running time in 17 datasets. Furthermore, it shrinks the COVID-19 dataset's dimension by 89% as opposed to the BSO's 79%. Moreover, the adopted operator on BSO-CV improved the balance between exploitation and exploration capabilities in the standard BSO, particularly in searching and converging toward optimal solutions. The BSO-CV was compared against the most recent wrapper-based FS methods; namely, the hyperlearning binary dragonfly algorithm (HLBDA), the binary moth flame optimization with Lévy flight (LBMFO-V3), the coronavirus herd immunity optimizer with greedy crossover operator (CHIO-GC), as well as four filter methods with an accuracy of more than 90% in most benchmark datasets. These optimistic results reveal the great potential of BSO-CV in reliably searching the feature space.

Analysis of Risk Factors of Coal Chemical Enterprises Based on Text Mining

Coal chemical enterprises have many risk factors, and the causes of accidents are complex. The traditional risk assessment methods rely on expert experience and previous literature to determine the causes of accidents, which has the problems such as lack of objectivity and low interpretation ability. Analyzing the accident report helps to identify typical accident risk factors and determines the accident evolution rule. However, experts usually judge this work manually, which is subjective and time-consuming. This paper developed an improved approach to identify safety risk factors from a volume of coal chemical accident reports using text mining (TM) technology. Firstly, the accident report was preprocessed, and the Term Frequency Inverse Document Frequency (TF-IDF) was used for feature extraction. Then, the K-means algorithm and apriori algorithm were developed to cluster and for the association rule analysis of the vectorized documents in the TF-IDF matrix, respectively to quickly identify the hidden risk factors and the relationship between risk factors in the accident report and to propose targeted safety management measures. Using the sample data of 505 accidents in a large coal chemical enterprise in Western China in the past seven years, the enterprise accident reports were analyzed by text clustering analysis and association rule analysis methods. Through the analysis, six accident clusters and 13 association rules were obtained, and the main risk factors of each accident cluster were further mined, and the corresponding management suggestions were put forward for the enterprise. This method provides a new idea for coal chemical enterprises to make safety management decisions and helps to prevent safety accidents.

Identification of technology frontiers of artificial intelligence-assisted pathology based on patent citation network

OBJECTIVES

This paper aimed to identify the technology frontiers of artificial intelligence-assisted pathology based on patent citation network.

METHODS

Patents related to artificial intelligence-assisted pathology were searched and collected from the Derwent Innovation Index (DII), which were imported into Derwent Data Analyzer (DDA, Clarivate Derwent, New York, NY, USA) for authority control, and imported into the freely available computer program Ucinet 6 for drawing the patent citation network. The patent citation network according to the citation relationship could describe the technology development context in the field of artificial intelligence-assisted pathology. The patent citations were extracted from the collected patent data, selected highly cited patents to form a co-occurrence matrix, and built a patent citation network based on the co-occurrence matrix in each period. Text clustering is an unsupervised learning method, an important method in text mining, where similar documents are grouped into clusters. The similarity between documents are determined by calculating the distance between them, and the two documents with the closest distance are combined. The method of text clustering was used to identify the technology frontiers based on the patent citation network, which was according to co-word analysis of the title and abstract of the patents in this field.

RESULTS

1704 patents were obtained in the field of artificial intelligence-assisted pathology, which had been currently undergoing three stages, namely the budding period (1992-2000), the development period (2001-2015), and the rapid growth period (2016-2021). There were two technology frontiers in the budding period (1992-2000), namely systems and methods for image data processing in computerized tomography (CT), and immunohistochemistry (IHC), five technology frontiers in the development period (2001-2015), namely spectral analysis methods of biomacromolecules, pathological information system, diagnostic biomarkers, molecular pathology diagnosis, and pathological diagnosis antibody, and six technology frontiers in the rapid growth period (2016-2021), namely digital pathology (DP), deep learning (DL) algorithms-convolutional neural networks (CNN), disease prediction models, computational pathology, pathological image analysis method, and intelligent pathological system.

CONCLUSIONS

Artificial intelligence-assisted pathology was currently in a rapid development period, and computational pathology, DL and other technologies in this period all involved the study of algorithms. Future research hotspots in this field would focus on algorithm improvement and intelligent diagnosis in order to realize the precise diagnosis. The results of this study presented an overview of the characteristics of research status and development trends in the field of artificial intelligence-assisted pathology, which could help readers broaden innovative ideas and discover new technological opportunities, and also served as important indicators for government policymaking.

Birdsongs recognition based on ensemble ELM with multi-strategy differential evolution

Birds are a kind of environmental indicator organism, which can reflect the changes in the ecological environment and biodiversity, and recognition of birdsongs can further help understand and protect birds and natural environment. Extreme learning machine (ELM) has the advantages of fast learning speed and good generalization ability, which is widely used in classification and recognition problems. Input layer weights and hidden layer thresholds are two key factors affecting ELM performance. As one of swarm intelligence optimization methods, differential evolution (DE) can be used to optimize the parameters of ELM. In order to enhance the diversity, convergence speed and global search ability of the DE population, and improve the accuracy and stability of the classification model, this paper proposes a multi-strategy differential evolution method (M-SDE) to optimize the parameters of the ELM. And the differential MFCC feature parameters, extracted from birdsongs, are applied to build classification models of M-SDE_ELM and an ensemble M-SDE_EnELM with optimized ELM for bird species recognition. In the experiments, the ELM models optimized by the swarm intelligence algorithms PSO and GOA are compared and analyzed by hypothesis tests with the M-SDE_ELM and M-SDE_EnELM. Results show that the M-SDE_ELM and M-SDE_EnELM can achieve a classification accuracy of 86.70% and 89.05% in the classification of nine species of birds respectively, and the recognition effect and stability of the M-SDE_EnELM model outperform other models.

Metaheuristics for multiple sequence alignment: A systematic review

The Multiple Sequence Alignment (MSA) is a key task in bioinformatics, because it is used in different important biological analysis, such as function and structure prediction of unknown proteins. There are several approaches to perform MSA and the use of metaheuristics stands out because of the search ability of these methods, which generally leads to good results in a reasonable amount of time. This paper presents a Systematic Literature Review (SLR) on metaheuristics for MSA, compiling relevant works published between 2014 and 2019. The results of our SLR show the constant interest in this subject, due to the several recent publications that use different metaheuristics to obtain more accurate alignments. Moreover, the final results of our SLR show a multi-objective and hybrid approaches trends, which generally leads these methods to achieve even better results. Thus, we show in this work how the use of metaheuristics to perform MSA still remains an important and promising open research field.