Two new genera and two new species of proteocephalidean tapeworms (Eucestoda) from reptiles and amphibians in Australia

A new species of Australotaenia (Cestoda: Proteocephalidae) from a hylid frog in Australia

A new species of the little-known genus Australotaenia de Chambrier & de Chambrier, 2010 is described from Ranoidea australis (Gray) (Anura: Hylidae), commonly known as the giant frog, northern snapping frog or round frog and which is a burrowing frog species native to Australia. Australotaenia hobbsi n. sp. is the fourth species of the genus, but the first taxon found in a burrowing frog and in northern Australia. The other species were found in Australian tree frogs (Litoria spp.) in southwestern and southeastern Australia, and in the homalopsid snake Enhydris enhydris (Schneider) in Cambodia. Australotaenia hobbsi n. sp. differs from its congeners (i) by the wider strobila (maximum body width 1,750 µm versus < 930 µm), scolex (570 µm versus < 390 µm) and suckers (diameter 215-230 µm versus < 140 µm); (ii) by the smaller relative size of the cirrus sac (12-15% of proglottid width versus 17-33%); (iii) by the absence of a vaginal sphincter (present in the other three species); (iv) different arrangement of the inner longitudinal musculature, which consists of a few individual muscle fibres (in contrast to the fibres grouped in bundles in other species). Australotaenia species and Pangasiocestus romani Scholz & de Chambrier, 2012 from the spot pangasius Pangasius lernaudii Boucourt, both of the subfamily Acanthotaeniinae, are unique among proteocephalids in terms of intermediate uterine development, with a high concentration of chromophilic cells around the tip of the lateral uterine diverticula.

Revision of Acanthotaenia von Linstow, 1903 (Cestoda: Proteocephalidae), parasites of monitors (Varanus spp.), based on morphological and molecular data

A morphological and molecular phylogenetic study of proteocephalid tapeworms of the genus Acanthotaenia von Linstow, 1903, parasites of monitors (Varanidae), was carried out. The type species, A. shipleyi von Linstow, 1903, which was originally described based on an immature specimen from Sri Lanka, is redescribed based on new material from the type host, Varanus salvator, in Sri Lanka, Malaysia, and Vietnam, and its neotype is designated. In addition, Acanthotaenia susanae n. sp. is described from Varanus nebulosus in Vietnam. The new species differs from congeners by the large size of the scolex, width of the rostellum and the number of testes. New molecular data (sequences of lsrDNA and cox1) revealed Acanthotaenia paraphyletic with the inclusion of Australotaenia bunthangi de Chambrier & Scholz, 2012, a parasite of Enhydris enhydris (Ophidia: Homalopsidae) in Cambodia. Molecular data confirm a wide distribution of A. shipleyi (isolates from Malaysia and Vietnam were almost identical) and indicate a strict host specificity (oioxeny) of individual species of the genus. Type specimens of four species made it possible to supplement their morphological descriptions. A survey of all species of Acanthotaenia recognised as valid is presented and the following taxonomic changes are proposed: Acanthotaenia pythonis Wahid, 1968 described from the green python, Morelia viridis, in a zoo, is transferred to Kapsulotaenia as Kapsulotaenia pythonis (Wahid, 1968) n. comb., because it possesses intrauterine eggs grouped in capsules. Acanthotaenia gracilis (Beddard, 1913) from Varanus varius in Australia is considered to be species inquirenda because its original descriptions did not contain sufficient data for adequate circumscription and differentiation from congeners and type material was not available. Generic diagnosis of Acanthotaenia is amended and a key to its seven species is provided.

Natural history bycatch: a pipeline for identifying metagenomic sequences in RADseq data

Background

Reduced representation genomic datasets are increasingly becoming available from a variety of organisms. These datasets do not target specific genes, and so may contain sequences from parasites and other organisms present in the target tissue sample. In this paper, we demonstrate that (1) RADseq datasets can be used for exploratory analysis of tissue-specific metagenomes, and (2) tissue collections house complete metagenomic communities, which can be investigated and quantified by a variety of techniques.

Methods

We present an exploratory method for mining metagenomic “bycatch” sequences from a range of host tissue types. We use a combination of the pyRAD assembly pipeline, NCBI’s blastn software, and custom R scripts to isolate metagenomic sequences from RADseq type datasets.

Results

When we focus on sequences that align with existing references in NCBI’s GenBank, we find that between three and five percent of identifiable double-digest restriction site associated DNA (ddRAD) sequences from host tissue samples are from phyla to contain known blood parasites. In addition to tissue samples, we examine ddRAD sequences from metagenomic DNA extracted snake and lizard hind-gut samples. We find that the sequences recovered from these samples match with expected bacterial and eukaryotic gut microbiome phyla.

Discussion

Our results suggest that (1) museum tissue banks originally collected for host DNA archiving are also preserving valuable parasite and microbiome communities, (2) that publicly available RADseq datasets may include metagenomic sequences that could be explored, and (3) that restriction site approaches are a useful exploratory technique to identify microbiome lineages that could be missed by primer-based approaches.

A large 28S rDNA-based phylogeny confirms the limitations of established morphological characters for classification of proteocephalidean tapeworms (Platyhelminthes, Cestoda)

Proteocephalidean tapeworms form a diverse group of parasites currently known from 315 valid species. Most of the diversity of adult proteocephalideans can be found in freshwater fishes (predominantly catfishes), a large proportion infects reptiles, but only a few infect amphibians, and a single species has been found to parasitize possums. Although they have a cosmopolitan distribution, a large proportion of taxa are exclusively found in South America. We analyzed the largest proteocephalidean cestode molecular dataset to date comprising more than 100 species (30 new), including representatives from 54 genera (80%) and all subfamilies, thus significantly improving upon previous works to develop a molecular phylogeny for the group. The Old World origin of proteocephalideans is confirmed, with their more recent expansion in South America. The earliest diverging lineages are composed of Acanthotaeniinae and Gangesiinae but most of the presently recognized subfamilies (and genera) appear not to be monophyletic; a deep systematic reorganization of the order is thus needed and the present subfamilial system should be abandoned. The main characters on which the classical systematics of the group has been built, such as scolex morphology or relative position of genital organs in relation to the longitudinal musculature, are of limited value, as demonstrated by the very weak support for morphologically-defined subfamilies. However, new characters, such as the pattern of uterus development, relative ovary size, and egg structure have been identified, which may be useful in defining phylogenetically well-supported subgroups. A strongly supported lineage infecting various snakes from a wide geographical distribution was found. Although several improvements over previous works regarding phylogenetic resolution and taxon coverage were achieved in this study, the major polytomy in our tree, composed largely of siluriform parasites from the Neotropics, remained unresolved and possibly reflects a rapid radiation. The genus Spasskyellina Freze, 1965 is resurrected for three species of Monticellia bearing spinitriches on the margins of their suckers.

Orders out of chaos--molecular phylogenetics reveals the complexity of shark and stingray tapeworm relationships

Novel molecular data are presented to resolve the long-standing issue of the non-monophyly of the elasmobranch-hosted tapeworm order Tetraphyllidea relative to the other acetabulate eucestode orders. Bayesian inference analyses of various combinations of full ssrDNA, and full or partial lsrDNA (D1-D3), sequence data, which included 134 species representing 97 genera across the 15 eucestode orders, were conducted. New ssrDNA data were generated for 82 species, partial lsrDNA data for 53 species, and full lsrDNA data for 29 species. The monophyly of each of the elasmobranch-hosted orders Cathetocephalidea, Litobothriidea, Lecanicephalidea and Rhinebothriidea was confirmed, as was the non-monophyly of the Tetraphyllidea. Two relatively stable groups of tetraphyllidean taxa emerged and are hereby designated as new orders. The Onchoproteocephalidea n. ord. is established to recognise the integrated nature of one undescribed and 10 described genera of hook-bearing tetraphyllideans, previously placed in the family Onchobothriidae, with the members of the order Proteocephalidea. The Phyllobothriidea n. ord. is established for a subset of 12 non-hooked genera characterised by scoleces bearing four bothridia each with an anterior accessory sucker; most parasitise sharks and have been assigned to the Phyllobothriidae at one time or another. Tentative ordinal placements are suggested for eight additional genera; placements for the remaining tetraphyllidean genera have not yet emerged. We propose that these 17 genera remain in the "Tetraphyllidea". Among these, particularly labile across analyses were Anthobothrium, Megalonchos, Carpobothrium, Calliobothrium and Caulobothrium. The unique association of Chimaerocestus with holocephalans, rather than with elasmobranchs, appears to represent a host-switching event. Both of the non-elasmobranch hosted clades of acetabulate cestodes (i.e. Proteocephalidea and Cyclophyllidea and their kin) appear to have had their origins with elasmobranch cestodes. Across analyses, the sister group to the clade of "terrestrial" cestode orders was found to be an elasmobranch-hosted genus, as was the sister to the freshwater fish- and tetrapod-hosted Proteocephalidea. Whilst further data are required to resolve outstanding nomenclatural and phylogenetic issues, the present analyses contribute significantly to an understanding of the evolutionary radiation of the entire Cestoda. Clearly, elasmobranch tapeworms comprise the backbone of cestode phylogeny.

A new species of Australotaenia (Cestoda: Proteocephalidea) from a snake in Cambodia: host switching or postcyclic parasitism in a distant region?

Australotaenia de Chambrier et de Chambrier, 2010 has been proposed to accommodate two species of proteocephalidean cestodes from hylid frogs (Litoria spp.) in Australia. Recently, apparently congeneric cestode, for which the name A. bunthangi sp. n. is proposed, was found in the homalopsid snake Enhydris enhydris (Schneider) (Serpentes: Homalopsidae) from South-East Asia (Cambodia). This finding indicates a much wider range of definitive hosts of species of this genus, i.e. amphibians and reptiles, which is exceptional among proteocephalideans. Postcyclic parasitism, i.e. predation of the definitive host infected with sexually mature parasites, cannot be excluded but does not seem to be probable. In addition, the occurrence of A. bunthangi in the former Indochina extends the range of the geographical distribution of the genus to another zoogeographical region. The new species differs from both species of Australotaenia in the relative size of an apical organ, the diameter of which equals to that of suckers (versus much smaller in the remaining species, in which the width of the apical organ represents less than 2/3 of the diameter of the suckers), much smaller scolex and suckers (width 150 microm and diameter of suckers 50-55 microm versus 245-420 microm and 100-140 microm, respectively), and longer body (224 mm versus 57-121 mm). In addition, A. bunthangi differs from A. hylae (Johnston, 1912) (type-species of the genus) by the number of testes (46-64 versus 74-106 in A. hylae) and by the ovary width/proglottis width ratio (55-65% versus 68-71% in A. hylae). Australotaenia bunthangi differs from A. grobeli de Chambrier et de Chambrier, 2010 by relative size of the cirrus-sac (its length represents 18-24% of the width of the proglottis versus 27-33% in A. grobeli) and by the diameter of the embryophore (25-27 microm versus 18-23 microm in A. grobeli).

Ophiotaenia bungari n. sp. (Cestoda), a parasite of Bungarus fasciatus (Schneider) (Ophidia: Elapidae) from Vietnam, with comments on relative ovarian size as a new and potentially useful diagnostic character for proteocephalidean tapeworms

Ophiotaenia bungari n. sp. (Cestoda: Proteocephalidea) is described from the intestine of the banded krait Bungarus fasciatus (Schneider) (Ophidia: Elapidae) in Vietnam. The new species differs from all but three Ophiotaenia species parasitic in Asian reptiles in the possession of a glandular apical organ. It differs from O. andersoni Jensen, Schmidt & Kuntz, 1983 in the position of the vagina in relation to the cirrus-sac (anterior and posterior in O. bungari versus anterior only in the latter species), in the cirrus-sac/proglottis width ratio (29-38 versus 50%) and by having more testes (100-150 versus 42-116 in O. andersoni); from O. chattoraji Srivastava, 1980 in the number of uterine diverticula (50-65 versus 10-26) and in the cirrus-sac/proglottis width ratio (29-38 versus 22%); and from O. rhabdophidis (Burt, 1937) by having more uterine diverticula (50-65 versus 30-45), by the cirrus-sac/proglottis width ratio (29-38 versus 20-25%) and by the width of the scolex (360-420 versus 130-187 μm). The taxonomic importance of the relative size of the ovary (i.e. the ratio of the ovarian size in relation to that of the entire proglottis), a character previously not used in the systematics of proteocephalidean cestodes, is discussed. Comparison of measurements of all of the nominal species of Ophiotaenia La Rue, 1911 and Proteocephalus Weinland, 1858 (c.135 species) has shown that the ovary of species parasitic in snakes in the Americas, Africa, Asia and Australia is not only considerably smaller than that of congeneric species from European hosts, but also smaller than in all species of Proteocephalus parasitic in teleost fishes throughout the world.