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Chen Y, Dong Y, Yan J, Wang L, Yu S, Jiao K, Paquet-Durand F. Single-Cell Transcriptomic Profiling in Inherited Retinal Degeneration Reveals Distinct Metabolic Pathways in Rod and Cone Photoreceptors. Int J Mol Sci 2022; 23:12170. [PMID: 36293024 PMCID: PMC9603353 DOI: 10.3390/ijms232012170] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 09/28/2022] [Accepted: 10/08/2022] [Indexed: 08/31/2023] Open
Abstract
The cellular mechanisms underlying hereditary photoreceptor degeneration are still poorly understood. The aim of this study was to systematically map the transcriptional changes that occur in the degenerating mouse retina at the single cell level. To this end, we employed single-cell RNA-sequencing (scRNA-seq) and retinal degeneration-1 (rd1) mice to profile the impact of the disease mutation on the diverse retinal cell types during early post-natal development. The transcriptome data allowed to annotate 43,979 individual cells grouped into 20 distinct clusters. We further characterized cluster-specific metabolic and biological changes in individual cell types. Our results highlight Ca2+-signaling as relevant to hereditary photoreceptor degeneration. Although metabolic reprogramming in retina, known as the 'Warburg effect', has been documented, further metabolic changes were noticed in rd1 mice. Such metabolic changes in rd1 mutation was likely regulated through mitogen-activated protein kinase (MAPK) pathway. By combining single-cell transcriptomes and immunofluorescence staining, our study revealed cell type-specific changes in gene expression, as well as interplay between Ca2+-induced cell death and metabolic pathways.
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Affiliation(s)
- Yiyi Chen
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany
- Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Yujie Dong
- Yunnan Eye Institute & Key Laboratory of Yunnan Province, 650021 Kunming, China
| | - Jie Yan
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany
- Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Lan Wang
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany
- Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Shirley Yu
- Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Kangwei Jiao
- Yunnan Eye Institute & Key Laboratory of Yunnan Province, 650021 Kunming, China
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2
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Das S, Popp V, Power M, Groeneveld K, Yan J, Melle C, Rogerson L, Achury M, Schwede F, Strasser T, Euler T, Paquet-Durand F, Nache V. Redefining the role of Ca 2+-permeable channels in photoreceptor degeneration using diltiazem. Cell Death Dis 2022; 13:47. [PMID: 35013127 PMCID: PMC8748460 DOI: 10.1038/s41419-021-04482-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Revised: 10/07/2021] [Accepted: 11/23/2021] [Indexed: 12/18/2022]
Abstract
Hereditary degeneration of photoreceptors has been linked to over-activation of Ca2+-permeable channels, excessive Ca2+-influx, and downstream activation of Ca2+-dependent calpain-type proteases. Unfortunately, after more than 20 years of pertinent research, unequivocal evidence proving significant and reproducible photoreceptor protection with Ca2+-channel blockers is still lacking. Here, we show that both D- and L-cis enantiomers of the anti-hypertensive drug diltiazem were very effective at blocking photoreceptor Ca2+-influx, most probably by blocking the pore of Ca2+-permeable channels. Yet, unexpectedly, this block neither reduced the activity of calpain-type proteases, nor did it result in photoreceptor protection. Remarkably, application of the L-cis enantiomer of diltiazem even led to a strong increase in photoreceptor cell death. These findings shed doubt on the previously proposed links between Ca2+ and retinal degeneration and are highly relevant for future therapy development as they may serve to refocus research efforts towards alternative, Ca2+-independent degenerative mechanisms.
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Affiliation(s)
- Soumyaparna Das
- Institute for Ophthalmic Research, University of Tübingen, 72076, Tübingen, Germany
| | - Valerie Popp
- Institute of Physiology II, University Hospital Jena, Friedrich Schiller University Jena, 07743, Jena, Germany
| | - Michael Power
- Institute for Ophthalmic Research, University of Tübingen, 72076, Tübingen, Germany.,Werner Reichardt Centre for Integrative Neuroscience (CIN), University of Tübingen, 72076, Tübingen, Germany
| | - Kathrin Groeneveld
- Institute of Physiology II, University Hospital Jena, Friedrich Schiller University Jena, 07743, Jena, Germany.,Biomolecular Photonics Group, University Hospital Jena, Friedrich Schiller University Jena, 07743, Jena, Germany
| | - Jie Yan
- Institute for Ophthalmic Research, University of Tübingen, 72076, Tübingen, Germany
| | - Christian Melle
- Biomolecular Photonics Group, University Hospital Jena, Friedrich Schiller University Jena, 07743, Jena, Germany
| | - Luke Rogerson
- Werner Reichardt Centre for Integrative Neuroscience (CIN), University of Tübingen, 72076, Tübingen, Germany
| | - Marlly Achury
- Institute for Ophthalmic Research, University of Tübingen, 72076, Tübingen, Germany
| | - Frank Schwede
- BIOLOG Life Science Institute GmbH & Co KG, 28199, Bremen, Germany
| | - Torsten Strasser
- Institute for Ophthalmic Research, University of Tübingen, 72076, Tübingen, Germany
| | - Thomas Euler
- Institute for Ophthalmic Research, University of Tübingen, 72076, Tübingen, Germany.,Werner Reichardt Centre for Integrative Neuroscience (CIN), University of Tübingen, 72076, Tübingen, Germany
| | | | - Vasilica Nache
- Institute of Physiology II, University Hospital Jena, Friedrich Schiller University Jena, 07743, Jena, Germany.
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3
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HDAC inhibition ameliorates cone survival in retinitis pigmentosa mice. Cell Death Differ 2020; 28:1317-1332. [PMID: 33159184 PMCID: PMC8026998 DOI: 10.1038/s41418-020-00653-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2020] [Revised: 10/12/2020] [Accepted: 10/15/2020] [Indexed: 12/27/2022] Open
Abstract
Cone photoreceptor cell death in inherited retinal diseases, such as Retinitis Pigmentosa (RP), leads to the loss of high acuity and color vision and, ultimately to blindness. In RP, a vast number of mutations perturb the structure and function of rod photoreceptors, while cones remain initially unaffected. Extensive rod loss in advanced stages of the disease triggers cone death by a mechanism that is still largely unknown. Here, we show that secondary cone cell death in animal models for RP is associated with increased activity of histone deacetylates (HDACs). A single intravitreal injection of an HDAC inhibitor at late stages of the disease, when the majority of rods have already degenerated, was sufficient to delay cone death and support long-term cone survival in two mouse models for RP, affected by mutations in the phosphodiesterase 6b gene. Moreover, the surviving cones remained light-sensitive, leading to an improvement in visual function. RNA-seq analysis of protected cones demonstrated that HDAC inhibition initiated multi-level protection via regulation of different pro-survival pathways, including MAPK, PI3K-Akt, and autophagy. This study suggests a unique opportunity for targeted pharmacological protection of secondary dying cones by HDAC inhibition and creates hope to maintain vision in RP patients even in advanced disease stages.
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4
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Schnichels S, Paquet-Durand F, Löscher M, Tsai T, Hurst J, Joachim SC, Klettner A. Retina in a dish: Cell cultures, retinal explants and animal models for common diseases of the retina. Prog Retin Eye Res 2020; 81:100880. [PMID: 32721458 DOI: 10.1016/j.preteyeres.2020.100880] [Citation(s) in RCA: 70] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2019] [Revised: 06/23/2020] [Accepted: 06/26/2020] [Indexed: 12/11/2022]
Abstract
For many retinal diseases, including age-related macular degeneration (AMD), glaucoma, and diabetic retinopathy (DR), the exact pathogenesis is still unclear. Moreover, the currently available therapeutic options are often unsatisfactory. Research designed to remedy this situation heavily relies on experimental animals. However, animal models often do not faithfully reproduce human disease and, currently, there is strong pressure from society to reduce animal research. Overall, this creates a need for improved disease models to understand pathologies and develop treatment options that, at the same time, require fewer or no experimental animals. Here, we review recent advances in the field of in vitro and ex vivo models for AMD, glaucoma, and DR. We highlight the difficulties associated with studies on complex diseases, in which both the initial trigger and the ensuing pathomechanisms are unclear, and then delineate which model systems are optimal for disease modelling. To this end, we present a variety of model systems, ranging from primary cell cultures, over organotypic cultures and whole eye cultures, to animal models. Specific advantages and disadvantages of such models are discussed, with a special focus on their relevance to putative in vivo disease mechanisms. In many cases, a replacement of in vivo research will mean that several different in vitro models are used in conjunction, for instance to analyze and validate causative molecular pathways. Finally, we argue that the analytical decomposition into appropriate cell and tissue model systems will allow making significant progress in our understanding of complex retinal diseases and may furthermore advance the treatment testing.
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Affiliation(s)
- Sven Schnichels
- University Eye Hospital, Centre for Ophthalmology, University of Tübingen, Germany.
| | - François Paquet-Durand
- Institute for Ophthalmic Research, Centre for Ophthalmology, University of Tübingen, Germany
| | - Marina Löscher
- University Eye Hospital, Centre for Ophthalmology, University of Tübingen, Germany
| | - Teresa Tsai
- Experimental Eye Research Institute, University Eye Hospital, Ruhr-University Bochum, Germany
| | - José Hurst
- University Eye Hospital, Centre for Ophthalmology, University of Tübingen, Germany
| | - Stephanie C Joachim
- Experimental Eye Research Institute, University Eye Hospital, Ruhr-University Bochum, Germany
| | - Alexa Klettner
- Department of Ophthalmology, University Medical Center, University of Kiel, Kiel, Germany
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5
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Szatko KP, Korympidou MM, Ran Y, Berens P, Dalkara D, Schubert T, Euler T, Franke K. Neural circuits in the mouse retina support color vision in the upper visual field. Nat Commun 2020; 11:3481. [PMID: 32661226 PMCID: PMC7359335 DOI: 10.1038/s41467-020-17113-8] [Citation(s) in RCA: 52] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Accepted: 04/21/2020] [Indexed: 02/06/2023] Open
Abstract
Color vision is essential for an animal’s survival. It starts in the retina, where signals from different photoreceptor types are locally compared by neural circuits. Mice, like most mammals, are dichromatic with two cone types. They can discriminate colors only in their upper visual field. In the corresponding ventral retina, however, most cones display the same spectral preference, thereby presumably impairing spectral comparisons. In this study, we systematically investigated the retinal circuits underlying mouse color vision by recording light responses from cones, bipolar and ganglion cells. Surprisingly, most color-opponent cells are located in the ventral retina, with rod photoreceptors likely being involved. Here, the complexity of chromatic processing increases from cones towards the retinal output, where non-linear center-surround interactions create specific color-opponent output channels to the brain. This suggests that neural circuits in the mouse retina are tuned to extract color from the upper visual field, aiding robust detection of predators and ensuring the animal’s survival. Mice are able to discriminate colors, at least in the upper visual field. Here, the authors provide a comprehensive characterization of retinal circuits underlying this behavior.
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Affiliation(s)
- Klaudia P Szatko
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Bernstein Center for Computational Neuroscience, University of Tübingen, Tübingen, Germany.,Graduate Training Center of Neuroscience, International Max Planck Research School, University of Tübingen, Tübingen, Germany
| | - Maria M Korympidou
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Graduate Training Center of Neuroscience, International Max Planck Research School, University of Tübingen, Tübingen, Germany.,Center for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Yanli Ran
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Center for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Philipp Berens
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Bernstein Center for Computational Neuroscience, University of Tübingen, Tübingen, Germany.,Institute for Bioinformatics and Medical Informatics, University of Tübingen, Tübingen, Germany
| | - Deniz Dalkara
- Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France
| | - Timm Schubert
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Center for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Thomas Euler
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Bernstein Center for Computational Neuroscience, University of Tübingen, Tübingen, Germany.,Center for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Katrin Franke
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany. .,Bernstein Center for Computational Neuroscience, University of Tübingen, Tübingen, Germany. .,Center for Integrative Neuroscience, University of Tübingen, Tübingen, Germany.
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6
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Ko GYP. Circadian regulation in the retina: From molecules to network. Eur J Neurosci 2020; 51:194-216. [PMID: 30270466 PMCID: PMC6441387 DOI: 10.1111/ejn.14185] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2018] [Revised: 08/16/2018] [Accepted: 08/20/2018] [Indexed: 12/14/2022]
Abstract
The mammalian retina is the most unique tissue among those that display robust circadian/diurnal oscillations. The retina is not only a light sensing tissue that relays light information to the brain, it has its own circadian "system" independent from any influence from other circadian oscillators. While all retinal cells and retinal pigment epithelium (RPE) possess circadian oscillators, these oscillators integrate by means of neural synapses, electrical coupling (gap junctions), and released neurochemicals (such as dopamine, melatonin, adenosine, and ATP), so the whole retina functions as an integrated circadian system. Dysregulation of retinal clocks not only causes retinal or ocular diseases, it also impacts the circadian rhythm of the whole body, as the light information transmitted from the retina entrains the brain clock that governs the body circadian rhythms. In this review, how circadian oscillations in various retinal cells are integrated, and how retinal diseases affect daily rhythms.
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Affiliation(s)
- Gladys Y-P Ko
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas
- Texas A&M Institute for Neuroscience, Texas A&M University, College Station, Texas
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7
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Power MJ, Rogerson LE, Schubert T, Berens P, Euler T, Paquet-Durand F. Systematic spatiotemporal mapping reveals divergent cell death pathways in three mouse models of hereditary retinal degeneration. J Comp Neurol 2019; 528:1113-1139. [PMID: 31710697 DOI: 10.1002/cne.24807] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Revised: 08/06/2019] [Accepted: 10/20/2019] [Indexed: 12/20/2022]
Abstract
Calcium (Ca2+ ) dysregulation has been linked to neuronal cell death, including in hereditary retinal degeneration. Ca2+ dysregulation is thought to cause rod and cone photoreceptor cell death. Spatial and temporal heterogeneities in retinal disease models have hampered validation of this hypothesis. We examined the role of Ca2+ in photoreceptor degeneration, assessing the activation pattern of Ca2+ -dependent calpain proteases, generating spatiotemporal maps of the entire retina in the cpfl1 mouse model for primary cone degeneration, and in the rd1 and rd10 models for primary rod degeneration. We used Gaussian process models to distinguish the temporal sequences of degenerative molecular processes from other variability sources.In the rd1 and rd10 models, spatiotemporal pattern of increased calpain activity matched the progression of primary rod degeneration. High calpain activity coincided with activation of the calpain-2 isoform but not with calpain-1, suggesting differential roles for both calpain isoforms. Primary rod loss was linked to upregulation of apoptosis-inducing factor, although only a minute fraction of cells showed activity of the apoptotic marker caspase-3. After primary rod degeneration concluded, caspase-3 activation appeared in cones, suggesting apoptosis as the dominant mechanism for secondary cone loss. Gaussian process models highlighted calpain activity as a key event during primary rod photoreceptor cell death. Our data suggest a causal link between Ca2+ dysregulation and primary, nonapoptotic degeneration of photoreceptors and a role for apoptosis in secondary degeneration of cones, highlighting the importance of the spatial and temporal location of key molecular events, which may guide the evaluation of new therapies.
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Affiliation(s)
- Michael J Power
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Centre for Integrative Neuroscience (CIN), University of Tübingen, Tübingen, Germany.,Graduate Training Centre of Neuroscience (GTC), University of Tübingen, Tübingen, Germany
| | - Luke E Rogerson
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Centre for Integrative Neuroscience (CIN), University of Tübingen, Tübingen, Germany.,Graduate Training Centre of Neuroscience (GTC), University of Tübingen, Tübingen, Germany.,Bernstein Center for Computational Neuroscience, Tübingen, Germany.,Institute for Bioinformatics and Medical Informatics, University of Tübingen, Tübingen, Germany
| | - Timm Schubert
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Centre for Integrative Neuroscience (CIN), University of Tübingen, Tübingen, Germany
| | - Philipp Berens
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Centre for Integrative Neuroscience (CIN), University of Tübingen, Tübingen, Germany.,Bernstein Center for Computational Neuroscience, Tübingen, Germany.,Institute for Bioinformatics and Medical Informatics, University of Tübingen, Tübingen, Germany
| | - Thomas Euler
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.,Centre for Integrative Neuroscience (CIN), University of Tübingen, Tübingen, Germany.,Bernstein Center for Computational Neuroscience, Tübingen, Germany
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8
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Franke K, Maia Chagas A, Zhao Z, Zimmermann MJY, Bartel P, Qiu Y, Szatko KP, Baden T, Euler T. An arbitrary-spectrum spatial visual stimulator for vision research. eLife 2019; 8:e48779. [PMID: 31545172 PMCID: PMC6783264 DOI: 10.7554/elife.48779] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2019] [Accepted: 09/20/2019] [Indexed: 01/05/2023] Open
Abstract
Visual neuroscientists require accurate control of visual stimulation. However, few stimulator solutions simultaneously offer high spatio-temporal resolution and free control over the spectra of the light sources, because they rely on off-the-shelf technology developed for human trichromatic vision. Importantly, consumer displays fail to drive UV-shifted short wavelength-sensitive photoreceptors, which strongly contribute to visual behaviour in many animals, including mice, zebrafish and fruit flies. Moreover, many non-mammalian species feature more than three spectral photoreceptor types. Here, we present a flexible, spatial visual stimulator with up to six arbitrary spectrum chromatic channels. It combines a standard digital light processing engine with open source hard- and software that can be easily adapted to the experimentalist's needs. We demonstrate the capability of this general visual stimulator experimentally in the in vitro mouse retinal whole-mount and the in vivo zebrafish. With this work, we intend to start a community effort of sharing and developing a common stimulator design for vision research.
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Affiliation(s)
- Katrin Franke
- Institute for Ophthalmic ResearchUniversity of TübingenTübingenGermany
- Bernstein Center for Computational NeuroscienceUniversity of TübingenTübingenGermany
| | - André Maia Chagas
- Institute for Ophthalmic ResearchUniversity of TübingenTübingenGermany
- Center for Integrative NeuroscienceUniversity of TübingenTübingenGermany
- Sussex Neuroscience, School of Life SciencesUniversity of SussexFalmerUnited Kingdom
| | - Zhijian Zhao
- Institute for Ophthalmic ResearchUniversity of TübingenTübingenGermany
- Center for Integrative NeuroscienceUniversity of TübingenTübingenGermany
| | - Maxime JY Zimmermann
- Sussex Neuroscience, School of Life SciencesUniversity of SussexFalmerUnited Kingdom
| | - Philipp Bartel
- Sussex Neuroscience, School of Life SciencesUniversity of SussexFalmerUnited Kingdom
| | - Yongrong Qiu
- Institute for Ophthalmic ResearchUniversity of TübingenTübingenGermany
- Center for Integrative NeuroscienceUniversity of TübingenTübingenGermany
| | - Klaudia P Szatko
- Institute for Ophthalmic ResearchUniversity of TübingenTübingenGermany
- Bernstein Center for Computational NeuroscienceUniversity of TübingenTübingenGermany
| | - Tom Baden
- Institute for Ophthalmic ResearchUniversity of TübingenTübingenGermany
- Sussex Neuroscience, School of Life SciencesUniversity of SussexFalmerUnited Kingdom
| | - Thomas Euler
- Institute for Ophthalmic ResearchUniversity of TübingenTübingenGermany
- Bernstein Center for Computational NeuroscienceUniversity of TübingenTübingenGermany
- Center for Integrative NeuroscienceUniversity of TübingenTübingenGermany
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9
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Power M, Das S, Schütze K, Marigo V, Ekström P, Paquet-Durand F. Cellular mechanisms of hereditary photoreceptor degeneration - Focus on cGMP. Prog Retin Eye Res 2019; 74:100772. [PMID: 31374251 DOI: 10.1016/j.preteyeres.2019.07.005] [Citation(s) in RCA: 70] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2019] [Revised: 07/25/2019] [Accepted: 07/29/2019] [Indexed: 12/21/2022]
Abstract
The cellular mechanisms underlying hereditary photoreceptor degeneration are still poorly understood, a problem that is exacerbated by the enormous genetic heterogeneity of this disease group. However, the last decade has yielded a wealth of new knowledge on degenerative pathways and their diversity. Notably, a central role of cGMP-signalling has surfaced for photoreceptor cell death triggered by a subset of disease-causing mutations. In this review, we examine key aspects relevant for photoreceptor degeneration of hereditary origin. The topics covered include energy metabolism, epigenetics, protein quality control, as well as cGMP- and Ca2+-signalling, and how the related molecular and metabolic processes may trigger photoreceptor demise. We compare and integrate evidence on different cell death mechanisms that have been associated with photoreceptor degeneration, including apoptosis, necrosis, necroptosis, and PARthanatos. A special focus is then put on the mechanisms of cGMP-dependent cell death and how exceedingly high photoreceptor cGMP levels may cause activation of Ca2+-dependent calpain-type proteases, histone deacetylases and poly-ADP-ribose polymerase. An evaluation of the available literature reveals that a large group of patients suffering from hereditary photoreceptor degeneration carry mutations that are likely to trigger cGMP-dependent cell death, making this pathway a prime target for future therapy development. Finally, an outlook is given into technological and methodological developments that will with time likely contribute to a comprehensive overview over the entire metabolic complexity of photoreceptor cell death. Building on such developments, new imaging technology and novel biomarkers may be used to develop clinical test strategies, that fully consider the genetic heterogeneity of hereditary retinal degenerations, in order to facilitate clinical testing of novel treatment approaches.
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Affiliation(s)
- Michael Power
- Cell Death Mechanism Group, Institute for Ophthalmic Research, University of Tübingen, Germany; Centre for Integrative Neurosciences (CIN), University of Tübingen, Germany; Graduate Training Centre of Neuroscience (GTC), University of Tübingen, Germany
| | - Soumyaparna Das
- Cell Death Mechanism Group, Institute for Ophthalmic Research, University of Tübingen, Germany; Graduate Training Centre of Neuroscience (GTC), University of Tübingen, Germany
| | | | - Valeria Marigo
- Department of Life Sciences, University of Modena and Reggio Emilia, Italy
| | - Per Ekström
- Ophthalmology, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, Sweden
| | - François Paquet-Durand
- Cell Death Mechanism Group, Institute for Ophthalmic Research, University of Tübingen, Germany.
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10
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Broad spectrum metabolomics for detection of abnormal metabolic pathways in a mouse model for retinitis pigmentosa. Exp Eye Res 2019; 184:135-145. [PMID: 30885711 DOI: 10.1016/j.exer.2019.03.007] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2018] [Revised: 02/07/2019] [Accepted: 03/11/2019] [Indexed: 02/05/2023]
Abstract
Retinitis pigmentosa (RP) is a degenerative disease of the retina that affects approximately 1 million people worldwide. There are multiple genetic causes of this disease, for which, at present, there are no effective therapeutic strategies. In the present report, we utilized broad spectrum metabolomics to identify perturbations in the metabolism of the rd10 mouse, a genetic model for RP that contains a mutation in Pde6β. These data provide novel insights into mechanisms that are potentially critical for retinal degeneration. C57BL/6J and rd10 mice were raised in cyclic light followed by either light or dark adaptation at postnatal day (P) 18, an early stage in the degeneration process. Mice raised entirely in the dark until P18 were also evaluated. After euthanasia, retinas were removed and extracted for analysis by ultra-performance liquid chromatography-time of flight-mass spectrometry (UPLC-QTOF-MS). Compared to wild type mice, rd10 mice raised in cyclic light or in complete darkness demonstrate significant alterations in retinal pyrimidine and purine nucleotide metabolism, potentially disrupting deoxynucleotide pools necessary for mitochondrial DNA replication. Other metabolites that demonstrate significant increases are the Coenzyme A intermediate, 4'-phosphopantothenate, and acylcarnitines. The changes in these metabolites, identified for the first time in a model of RP, are highly likely to disrupt normal energy metabolism. High levels of nitrosoproline were also detected in rd10 retinas relative to those from wild type mice. These results suggest that nitrosative stress may be involved in retinal degeneration in this mouse model.
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11
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Haq W, Dietter J, Zrenner E. Electrical activation of degenerated photoreceptors in blind mouse retina elicited network-mediated responses in different types of ganglion cells. Sci Rep 2018; 8:16998. [PMID: 30451928 PMCID: PMC6243018 DOI: 10.1038/s41598-018-35296-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2018] [Accepted: 11/02/2018] [Indexed: 01/21/2023] Open
Abstract
Electrical (e-) stimulation is explored in schemes to rescue the vision of blind people, e.g. those affected by Retinitis Pigmentosa (RP). We e-activated subretinally the surviving degenerated photoreceptors (d-Phrs) of the rd1 mouse (RP model) and evoked visual responses in the blind retina. The e-stimulation was applied with a single platinum/iridium electrode. The d-Phrs (calcium-imaging) and ganglion cells (GC) activity (MEA-recording) were recorded in simultaneous multilayer recordings. The findings of this study confirm that the d-Phrs responded to e-stimulation and modulated the retinal network-activity. The application of blockers revealed that the synaptic interactions were dependent on voltage-gated calcium channels and mediated by the transmitters glutamate and GABA. Moreover, the gap junctions coupled networks promoted the lateral-spread of the e-evoked activity in the outer (~60 µm) and inner (~120 µm) retina. The activated GCs were identified as subtypes of the ON, OFF and ON-OFF classes. In conclusion, d-Phrs are the ideal interface partners for implants to elicit enhanced visual responses at higher temporal and spatial resolution. Furthermore, the retina's intact circuity at the onset of complete blindness makes it a tempting target when considering the implantation of implants into young patients to provide a seamless transition from blinding to chip-aided vision.
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Affiliation(s)
- Wadood Haq
- Centre for Ophthalmology, Institute for Ophthalmic Research University of Tübingen, Elfriede-Aulhorn-Str. 5-7, D-72076, Tübingen, Germany.
| | - Johannes Dietter
- Centre for Ophthalmology, Institute for Ophthalmic Research University of Tübingen, Elfriede-Aulhorn-Str. 5-7, D-72076, Tübingen, Germany
| | - Eberhart Zrenner
- Centre for Ophthalmology, Institute for Ophthalmic Research University of Tübingen, Elfriede-Aulhorn-Str. 5-7, D-72076, Tübingen, Germany
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12
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Vighi E, Trifunović D, Veiga-Crespo P, Rentsch A, Hoffmann D, Sahaboglu A, Strasser T, Kulkarni M, Bertolotti E, van den Heuvel A, Peters T, Reijerkerk A, Euler T, Ueffing M, Schwede F, Genieser HG, Gaillard P, Marigo V, Ekström P, Paquet-Durand F. Combination of cGMP analogue and drug delivery system provides functional protection in hereditary retinal degeneration. Proc Natl Acad Sci U S A 2018; 115:E2997-E3006. [PMID: 29531030 PMCID: PMC5879685 DOI: 10.1073/pnas.1718792115] [Citation(s) in RCA: 77] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Inherited retinal degeneration (RD) is a devastating and currently untreatable neurodegenerative condition that leads to loss of photoreceptor cells and blindness. The vast genetic heterogeneity of RD, the lack of "druggable" targets, and the access-limiting blood-retinal barrier (BRB) present major hurdles toward effective therapy development. Here, we address these challenges (i) by targeting cGMP (cyclic guanosine- 3',5'-monophosphate) signaling, a disease driver common to different types of RD, and (ii) by combining inhibitory cGMP analogs with a nanosized liposomal drug delivery system designed to facilitate transport across the BRB. Based on a screen of several cGMP analogs we identified an inhibitory cGMP analog that interferes with activation of photoreceptor cell death pathways. Moreover, we found liposomal encapsulation of the analog to achieve efficient drug targeting to the neuroretina. This pharmacological treatment markedly preserved in vivo retinal function and counteracted photoreceptor degeneration in three different in vivo RD models. Taken together, we show that a defined class of compounds for RD treatment in combination with an innovative drug delivery method may enable a single type of treatment to address genetically divergent RD-type diseases.
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Affiliation(s)
- Eleonora Vighi
- Dipartimento di Scienze della Vita, Università degli Studi di Modena e Reggio Emilia, 41125 Modena, Italy
| | - Dragana Trifunović
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
| | - Patricia Veiga-Crespo
- Ophthalmology, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, 22184 Lund, Sweden
| | - Andreas Rentsch
- BIOLOG Life Science Institute Forschungslabor und Biochemica-Vertrieb GmbH, 28199 Bremen, Germany
| | - Dorit Hoffmann
- Dipartimento di Scienze della Vita, Università degli Studi di Modena e Reggio Emilia, 41125 Modena, Italy
| | - Ayse Sahaboglu
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
| | - Torsten Strasser
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
| | - Manoj Kulkarni
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
- Centre for Integrative Neuroscience, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
| | - Evelina Bertolotti
- Dipartimento di Scienze della Vita, Università degli Studi di Modena e Reggio Emilia, 41125 Modena, Italy
| | | | - Tobias Peters
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
| | | | - Thomas Euler
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
- Centre for Integrative Neuroscience, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
| | - Marius Ueffing
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany
| | - Frank Schwede
- BIOLOG Life Science Institute Forschungslabor und Biochemica-Vertrieb GmbH, 28199 Bremen, Germany
| | - Hans-Gottfried Genieser
- BIOLOG Life Science Institute Forschungslabor und Biochemica-Vertrieb GmbH, 28199 Bremen, Germany
| | - Pieter Gaillard
- to-BBB technologies BV, 2333 CH Leiden, The Netherlands
- 2-BBB Medicines BV, 2333 CH Leiden, The Netherlands
| | - Valeria Marigo
- Dipartimento di Scienze della Vita, Università degli Studi di Modena e Reggio Emilia, 41125 Modena, Italy;
| | - Per Ekström
- Ophthalmology, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, 22184 Lund, Sweden;
| | - François Paquet-Durand
- Forschungsinstitut für Augenheilkunde, Department für Augenheilkunde, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany;
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13
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Chapot CA, Behrens C, Rogerson LE, Baden T, Pop S, Berens P, Euler T, Schubert T. Local Signals in Mouse Horizontal Cell Dendrites. Curr Biol 2017; 27:3603-3615.e5. [PMID: 29174891 DOI: 10.1016/j.cub.2017.10.050] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2017] [Revised: 09/01/2017] [Accepted: 10/19/2017] [Indexed: 01/07/2023]
Abstract
The mouse retina contains a single type of horizontal cell, a GABAergic interneuron that samples from all cone photoreceptors within reach and modulates their glutamatergic output via parallel feedback mechanisms. Because horizontal cells form an electrically coupled network, they have been implicated in global signal processing, such as large-scale contrast enhancement. Recently, it has been proposed that horizontal cells can also act locally at the level of individual cone photoreceptors. To test this possibility physiologically, we used two-photon microscopy to record light stimulus-evoked Ca2+ signals in cone axon terminals and horizontal cell dendrites as well as glutamate release in the outer plexiform layer. By selectively stimulating the two mouse cone opsins with green and UV light, we assessed whether signals from individual cones remain isolated within horizontal cell dendritic tips or whether they spread across the dendritic arbor. Consistent with the mouse's opsin expression gradient, we found that the Ca2+ signals recorded from dendrites of dorsal horizontal cells were dominated by M-opsin and those of ventral horizontal cells by S-opsin activation. The signals measured in neighboring horizontal cell dendritic tips varied markedly in their chromatic preference, arguing against global processing. Rather, our experimental data and results from biophysically realistic modeling support the idea that horizontal cells can process cone input locally, extending the classical view of horizontal cell function. Pharmacologically removing horizontal cells from the circuitry reduced the sensitivity of the cone signal to low frequencies, suggesting that local horizontal cell feedback shapes the temporal properties of cone output.
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Affiliation(s)
- Camille A Chapot
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; Center for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Christian Behrens
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; Center for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Bernstein Center for Computational Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Luke E Rogerson
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; Center for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Bernstein Center for Computational Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Tom Baden
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; School of Life Sciences, University of Sussex, Brighton BN1 9RH, UK
| | - Sinziana Pop
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; Center for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Graduate Training Centre of Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Philipp Berens
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; Center for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Bernstein Center for Computational Neuroscience, University of Tübingen, 72076 Tübingen, Germany
| | - Thomas Euler
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; Center for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany; Bernstein Center for Computational Neuroscience, University of Tübingen, 72076 Tübingen, Germany.
| | - Timm Schubert
- Institute for Ophthalmic Research, University of Tübingen, 72076 Tübingen, Germany; Center for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany.
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14
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Sahaboglu A, Barth M, Secer E, Amo EMD, Urtti A, Arsenijevic Y, Zrenner E, Paquet-Durand F. Olaparib significantly delays photoreceptor loss in a model for hereditary retinal degeneration. Sci Rep 2016; 6:39537. [PMID: 28004814 PMCID: PMC5177898 DOI: 10.1038/srep39537] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2016] [Accepted: 11/24/2016] [Indexed: 12/14/2022] Open
Abstract
The enzyme poly-ADP-ribose-polymerase (PARP) mediates DNA-repair and rearrangements of the nuclear chromatin. Generally, PARP activity is thought to promote cell survival and in recent years a number of PARP inhibitors have been clinically developed for cancer treatment. Paradoxically, PARP activity is also connected to many diseases including the untreatable blinding disease Retinitis Pigmentosa (RP), where PARP activity appears to drive the pathogenesis of photoreceptor loss. We tested the efficacy of three different PARP inhibitors to prevent photoreceptor loss in the rd1 mouse model for RP. In retinal explant cultures in vitro, olaparib had strong and long-lasting photoreceptor neuroprotective capacities. We demonstrated target engagement by showing that olaparib reduced photoreceptor accumulation of poly-ADP-ribosylated proteins. Remarkably, olaparib also reduced accumulation of cyclic-guanosine-monophosphate (cGMP), a characteristic marker for photoreceptor degeneration. Moreover, intravitreal injection of olaparib in rd1 animals diminished PARP activity and increased photoreceptor survival, confirming in vivo neuroprotection. This study affirms the role of PARP in inherited retinal degeneration and for the first time shows that a clinically approved PARP inhibitor can prevent photoreceptor degeneration in an RP model. The wealth of human clinical data available for olaparib highlights its strong potential for a rapid clinical translation into a novel RP treatment.
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Affiliation(s)
| | - Melanie Barth
- Institute for Ophthalmic Research, Tuebingen, Germany.,Graduate Training Center of Neuroscience, Tuebingen, Germany
| | - Enver Secer
- Institute for Ophthalmic Research, Tuebingen, Germany.,Department of Medical Genetics, Erciyes University, Kayseri, Turkey
| | - Eva M Del Amo
- School of Pharmacy, University of Eastern Finland, Kuopio, Finland
| | - Arto Urtti
- School of Pharmacy, University of Eastern Finland, Kuopio, Finland.,Centre for Drug Research, Division of Pharmaceutical Biosciences, University of Helsinki, Helsinki, Finland
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15
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Kulkarni M, Trifunović D, Schubert T, Euler T, Paquet-Durand F. Calcium dynamics change in degenerating cone photoreceptors. Hum Mol Genet 2016; 25:3729-3740. [PMID: 27402880 DOI: 10.1093/hmg/ddw219] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2016] [Revised: 06/24/2016] [Accepted: 06/25/2016] [Indexed: 11/14/2022] Open
Abstract
Cone photoreceptors (cones) are essential for high-resolution daylight vision and colour perception. Loss of cones in hereditary retinal diseases has a dramatic impact on human vision. The mechanisms underlying cone death are poorly understood, and consequently, there are no treatments available. Previous studies suggest a central role for calcium (Ca2+) homeostasis deficits in photoreceptor degeneration; however, direct evidence for this is scarce and physiological measurements of Ca2+ in degenerating mammalian cones are lacking.Here, we took advantage of the transgenic HR2.1:TN-XL mouse line that expresses a genetically encoded Ca2+ biosensor exclusively in cones. We cross-bred this line with mouse models for primary ("cone photoreceptor function loss-1", cpfl1) and secondary ("retinal degeneration-1", rd1) cone degeneration, respectively, and assessed resting Ca2+ levels and light-evoked Ca2+ responses in cones using two-photon imaging. We found that Ca2+ dynamics were altered in cpfl1 cones, showing higher noise and variable Ca2+ levels, with significantly wider distribution than for wild-type and rd1 cones. Unexpectedly, up to 21% of cpfl1 cones still displayed light-evoked Ca2+ responses, which were larger and slower than wild-type responses. In contrast, genetically intact rd1 cones were characterized by lower noise and complete lack of visual function.Our study demonstrates alterations in cone Ca2+ dynamics in both primary and secondary cone degeneration. Our results are consistent with the view that higher (fluctuating) cone Ca2+ levels are involved in photoreceptor cell death in primary (cpfl1) but not in secondary (rd1) cone degeneration. These findings may guide the future development of therapies targeting photoreceptor Ca2+ homeostasis.
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Affiliation(s)
- Manoj Kulkarni
- Institute for Ophthalmic Research.,Werner Reichardt Centre for Integrative Neuroscience.,Graduate School of Cellular & Molecular Neuroscience
| | | | - Timm Schubert
- Institute for Ophthalmic Research.,Werner Reichardt Centre for Integrative Neuroscience
| | - Thomas Euler
- Institute for Ophthalmic Research (F.P-D.) (T.E.).,Werner Reichardt Centre for Integrative Neuroscience.,Bernstein Centre for Computational Neuroscience, University of Tübingen, Tübingen, Germany
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16
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Huang CCY, Shi L, Lin CH, Kim AJ, Ko ML, Ko GYP. A new role for AMP-activated protein kinase in the circadian regulation of L-type voltage-gated calcium channels in late-stage embryonic retinal photoreceptors. J Neurochem 2015; 135:727-41. [PMID: 26337027 DOI: 10.1111/jnc.13349] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2015] [Revised: 08/13/2015] [Accepted: 08/25/2015] [Indexed: 12/25/2022]
Abstract
AMP-activated protein kinase (AMPK) is a cellular energy sensor, which is activated when the intracellular ATP production decreases. The activities of AMPK display circadian rhythms in various organs and tissues, indicating that AMPK is involved in the circadian regulation of cellular metabolism. In vertebrate retina, the circadian clocks regulate many aspects of retinal function and physiology, including light/dark adaption, but whether and how AMPK was involved in the retinal circadian rhythm was not known. We hypothesized that the activation of AMPK (measured as phosphorylated AMPK) in the retina was under circadian control, and AMPK might interact with other intracellular signaling molecules to regulate photoreceptor physiology. We combined ATP assays, western blots, immunostaining, patch-clamp recordings, and pharmacological treatments to decipher the role of AMPK in the circadian regulation of photoreceptor physiology. We found that the overall retinal ATP content displayed a diurnal rhythm that peaked at early night, which was nearly anti-phase to the diurnal and circadian rhythms of AMPK phosphorylation. AMPK was also involved in the circadian phase-dependent regulation of photoreceptor L-type voltage-gated calcium channels (L-VGCCs), the ion channel essential for sustained neurotransmitter release. The activation of AMPK dampened the L-VGCC currents at night with a corresponding decrease in protein expression of the L-VGCCα1 pore-forming subunit, while inhibition of AMPK increased the L-VGCC current during the day. AMPK appeared to be upstream of extracellular-signal-regulated kinase and mammalian/mechanistic target of rapamycin complex 1 (mTORC1) but downstream of adenylyl cyclase in regulating the circadian rhythm of L-VGCCs. Hence, as a cellular energy sensor, AMPK integrates into the cell signaling network to regulate the circadian rhythm of photoreceptor physiology. We found that in chicken embryonic retina, the activation of AMP-activated protein kinase (AMPK) is under circadian control and anti-phase to the retinal ATP rhythm. While ATP content is higher at night, phosphorylated AMPK (pAMPK) is higher during the day. AMPK appears to be upstream of extracellular signal-regulated kinase (ERK), protein kinase B (AKT), and mammalian target of rapamycin complex 1 (mTORC1) but downstream of adenylyl cyclase in regulating the circadian rhythm of L-VGCCs. Therefore, as a cellular energy sensor, AMPK integrates into the cell signaling network to regulate the circadian rhythm of photoreceptor physiology.
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Affiliation(s)
- Cathy C Y Huang
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, USA
| | - Liheng Shi
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, USA
| | - Chia-Hung Lin
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, USA
| | - Andy Jeesu Kim
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, USA
| | - Michael L Ko
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, USA
| | - Gladys Y-P Ko
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, USA.,Texas A&M Institute of Neuroscience, Texas A&M University, College Station, Texas, USA
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17
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Abstract
The measurement of intracellular analytes has been key in understanding cellular processes and function, and the use of biological nanosensors has revealed the spatial and temporal variation in their concentrations. In particular, ratiometric nanosensors allow quantitative measurements of analyte concentrations. The present review focuses on the recent advances in ratiometric intracellular biological nanosensors, with an emphasis on their utility in measuring analytes that are important in cell function.
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18
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Kulkarni M, Schubert T, Baden T, Wissinger B, Euler T, Paquet-Durand F. Imaging Ca2+ dynamics in cone photoreceptor axon terminals of the mouse retina. J Vis Exp 2015:e52588. [PMID: 25993489 PMCID: PMC4542458 DOI: 10.3791/52588] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
Retinal cone photoreceptors (cones) serve daylight vision and are the basis of color discrimination. They are subject to degeneration, often leading to blindness in many retinal diseases. Calcium (Ca2+), a key second messenger in photoreceptor signaling and metabolism, has been proposed to be indirectly linked with photoreceptor degeneration in various animal models. Systematically studying these aspects of cone physiology and pathophysiology has been hampered by the difficulties of electrically recording from these small cells, in particular in the mouse where the retina is dominated by rod photoreceptors. To circumvent this issue, we established a two-photon Ca2+ imaging protocol using a transgenic mouse line that expresses the genetically encoded Ca2+ biosensor TN-XL exclusively in cones and can be crossbred with mouse models for photoreceptor degeneration. The protocol described here involves preparing vertical sections (“slices”) of retinas from mice and optical imaging of light stimulus-evoked changes in cone Ca2+ level. The protocol also allows “in-slice measurement” of absolute Ca2+ concentrations; as the recordings can be followed by calibration. This protocol enables studies into functional cone properties and is expected to contribute to the understanding of cone Ca2+ signaling as well as the potential involvement of Ca2+ in photoreceptor death and retinal degeneration.
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Affiliation(s)
- Manoj Kulkarni
- Institute for Ophthalmic Research, University of Tübingen; Graduate School of Cellular & Molecular Neuroscience, University of Tübingen
| | - Timm Schubert
- Institute for Ophthalmic Research, University of Tübingen; Bernstein Centre for Computational Neuroscience, University of Tübingen
| | - Tom Baden
- Institute for Ophthalmic Research, University of Tübingen; Graduate School of Cellular & Molecular Neuroscience, University of Tübingen; Bernstein Centre for Computational Neuroscience, University of Tübingen
| | - Bernd Wissinger
- Molecular Genetics Laboratory, University of Tübingen; Centre for Ophthalmology, University of Tübingen
| | - Thomas Euler
- Institute for Ophthalmic Research, University of Tübingen; Graduate School of Cellular & Molecular Neuroscience, University of Tübingen; Bernstein Centre for Computational Neuroscience, University of Tübingen;
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Differential regulation of cone calcium signals by different horizontal cell feedback mechanisms in the mouse retina. J Neurosci 2014; 34:11826-43. [PMID: 25164677 DOI: 10.1523/jneurosci.0272-14.2014] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
Controlling neurotransmitter release by modulating the presynaptic calcium level is a key mechanism to ensure reliable signal transmission from one neuron to the next. In this study, we investigated how the glutamatergic output of cone photoreceptors (cones) in the mouse retina is shaped by different feedback mechanisms from postsynaptic GABAergic horizontal cells (HCs) using a combination of two-photon calcium imaging and pharmacology at the level of individual cone axon terminals. We provide evidence that hemichannel-mediated (putative ephaptic) feedback sets the cone output gain by defining the basal calcium level, a mechanism that may be crucial for adapting cones to the ambient light level. In contrast, pH-mediated feedback did not modulate the cone basal calcium level but affected the size and shape of light-evoked cone calcium signals in a contrast-dependent way: low-contrast light responses were amplified, whereas high-contrast light responses were reduced. Finally, we provide functional evidence that GABA shapes light-evoked calcium signals in cones. Because we could not localize ionotropic GABA receptors on cone axon terminals using electron microscopy, we suggest that GABA may act through GABA autoreceptors on HCs, thereby possibly modulating hemichannel- and/or pH-mediated feedback. Together, our results suggest that at the cone synapse, hemichannel-mediated (ephaptic) and pH-mediated feedback fulfill distinct functions to adjust the output of cones to changing ambient light levels and stimulus contrasts and that the efficacy of these feedback mechanisms is likely modulated by GABA release in the outer retina.
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Haq W, Arango-Gonzalez B, Zrenner E, Euler T, Schubert T. Synaptic remodeling generates synchronous oscillations in the degenerated outer mouse retina. Front Neural Circuits 2014; 8:108. [PMID: 25249942 PMCID: PMC4155782 DOI: 10.3389/fncir.2014.00108] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2014] [Accepted: 08/19/2014] [Indexed: 11/28/2022] Open
Abstract
During neuronal degenerative diseases, neuronal microcircuits undergo severe structural alterations, leading to remodeling of synaptic connectivity. The functional consequences of such remodeling are mostly unknown. For instance, in mutant rd1 mouse retina, a common model for Retinitis Pigmentosa, rod bipolar cells (RBCs) establish contacts with remnant cone photoreceptors (cones) as a consequence of rod photoreceptor cell death and the resulting lack of presynaptic input. To assess the functional connectivity in the remodeled, light-insensitive outer rd1 retina, we recorded spontaneous population activity in retinal wholemounts using Ca(2+) imaging and identified the participating cell types. Focusing on cones, RBCs and horizontal cells (HCs), we found that these cell types display spontaneous oscillatory activity and form synchronously active clusters. Overall activity was modulated by GABAergic inhibition from interneurons such as HCs and/or possibly interplexiform cells. Many of the activity clusters comprised both cones and RBCs. Opposite to what is expected from the intact (wild-type) cone-ON bipolar cell pathway, cone and RBC activity was positively correlated and, at least partially, mediated by glutamate transporters expressed on RBCs. Deletion of gap junctional coupling between cones reduced the number of clusters, indicating that electrical cone coupling plays a crucial role for generating the observed synchronized oscillations. In conclusion, degeneration-induced synaptic remodeling of the rd1 retina results in a complex self-sustained outer retinal oscillatory network, that complements (and potentially modulates) the recently described inner retinal oscillatory network consisting of amacrine, bipolar and ganglion cells.
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Affiliation(s)
- Wadood Haq
- Centre for Ophthalmology, Institute for Ophthalmic Research, University of TübingenTübingen, Germany
- Werner Reichardt Centre for Integrative Neuroscience (CIN), University of TübingenTübingen, Germany
- Bernstein Center for Computational Neuroscience Tübingen, University of TübingenTübingen, Germany
| | - Blanca Arango-Gonzalez
- Centre for Ophthalmology, Institute for Ophthalmic Research, University of TübingenTübingen, Germany
| | - Eberhart Zrenner
- Centre for Ophthalmology, Institute for Ophthalmic Research, University of TübingenTübingen, Germany
- Werner Reichardt Centre for Integrative Neuroscience (CIN), University of TübingenTübingen, Germany
- Bernstein Center for Computational Neuroscience Tübingen, University of TübingenTübingen, Germany
| | - Thomas Euler
- Centre for Ophthalmology, Institute for Ophthalmic Research, University of TübingenTübingen, Germany
- Werner Reichardt Centre for Integrative Neuroscience (CIN), University of TübingenTübingen, Germany
- Bernstein Center for Computational Neuroscience Tübingen, University of TübingenTübingen, Germany
| | - Timm Schubert
- Centre for Ophthalmology, Institute for Ophthalmic Research, University of TübingenTübingen, Germany
- Werner Reichardt Centre for Integrative Neuroscience (CIN), University of TübingenTübingen, Germany
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21
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Abstract
Rod and cone photoreceptors are coupled by gap junctions (GJs), relatively large channels able to mediate both electrical and molecular communication. Despite their critical location in our visual system and evidence that they are dynamically gated for dark/light adaptation, the full impact that rod–cone GJs can have on cone function is not known. We recorded the photovoltage of mouse cones and found that the initial level of rod input increased spontaneously after obtaining intracellular access. This process allowed us to explore the underlying coupling capacity to rods, revealing that fully coupled cones acquire a striking rod-like phenotype. Calcium, a candidate mediator of the coupling process, does not appear to be involved on the cone side of the junctional channels. Our findings show that the anatomical substrate is adequate for rod–cone coupling to play an important role in vision and, possibly, in biochemical signaling among photoreceptors. DOI:http://dx.doi.org/10.7554/eLife.01386.001 People can see in a range of light levels—from dim moonlight to bright midday sun—because our eyes contain two types of light-sensitive cells: rods and cones. Rods are more plentiful than cones, and while they are sensitive at low light levels, rods can only provide grey-scale vision. Further, bright light can rapidly ‘dazzle’ the ability of rods to see in near-darkness, and they are slow to recover when this happens. In contrast, cones need bright light to function, but allow us to see in colour. The signals received by rods and cones are sent through the optic nerve to the brain, where they are interpreted as vision. However, ‘gap junctions’ that connect the rods and cones allow for electrical and chemical ‘crosstalk’ between these cells, before the signals then travel along the optic nerve. Furthermore, even though it is thought that the connections between rods and cones are regulated in response to light, the body’s daily rhythms and other biochemical signals, their importance for vision is not known. Now, Asteriti et al. have taken tissue slices from the retinas at the back of mice eyes, and measured the electrical signals generated when cones are exposed to light. This revealed that the rod-cone coupling is strong enough to make the cones responsive to dim light, just like rods. Moreover, the cones also recovered slowly after being exposed to flashes of bright light. When chemical inhibitors were used to block the gap junctions, the cones stopped behaving like rods and became less sensitive to dim light. The findings of Asteriti et al. show that rod-cone coupling is sufficient to play an important role in vision. The next challenge is to find out what this role is, and how it might be affected by different physiological conditions, including stress and injury. DOI:http://dx.doi.org/10.7554/eLife.01386.002
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Affiliation(s)
- Sabrina Asteriti
- Department of Translational Research, University of Pisa, Pisa, Italy
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22
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Baden T, Schubert T, Chang L, Wei T, Zaichuk M, Wissinger B, Euler T. A Tale of Two Retinal Domains: Near-Optimal Sampling of Achromatic Contrasts in Natural Scenes through Asymmetric Photoreceptor Distribution. Neuron 2013; 80:1206-17. [DOI: 10.1016/j.neuron.2013.09.030] [Citation(s) in RCA: 136] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/03/2013] [Indexed: 01/10/2023]
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Huang CCY, Ko ML, Ko GYP. A new functional role for mechanistic/mammalian target of rapamycin complex 1 (mTORC1) in the circadian regulation of L-type voltage-gated calcium channels in avian cone photoreceptors. PLoS One 2013; 8:e73315. [PMID: 23977383 PMCID: PMC3747127 DOI: 10.1371/journal.pone.0073315] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2013] [Accepted: 07/19/2013] [Indexed: 01/10/2023] Open
Abstract
In the retina, the L-type voltage-gated calcium channels (L-VGCCs) are responsible for neurotransmitter release from photoreceptors and are under circadian regulation. Both the current densities and protein expression of L-VGCCs are significantly higher at night than during the day. However, the underlying mechanisms of circadian regulation of L-VGCCs in the retina are not completely understood. In this study, we demonstrated that the mechanistic/mammalian target of rapamycin complex (mTORC) signaling pathway participated in the circadian phase-dependent modulation of L-VGCCs. The activities of the mTOR cascade, from mTORC1 to its downstream targets, displayed circadian oscillations throughout the course of a day. Disruption of mTORC1 signaling dampened the L-VGCC current densities, as well as the protein expression of L-VGCCs at night. The decrease of L-VGCCs at night by mTORC1 inhibition was in part due to a reduction of L-VGCCα1 subunit translocation from the cytosol to the plasma membrane. Finally, we showed that mTORC1 was downstream of the phosphatidylionositol 3 kinase-protein kinase B (PI3K-AKT) signaling pathway. Taken together, mTORC1 signaling played a role in the circadian regulation of L-VGCCs, in part through regulation of ion channel trafficking and translocation, which brings to light a new functional role for mTORC1: the modulation of ion channel activities.
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Affiliation(s)
- Cathy Chia-Yu Huang
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, United States of America
| | - Michael Lee Ko
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, United States of America
| | - Gladys Yi-Ping Ko
- Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas, United States of America
- * E-mail:
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Baden T, Euler T, Weckström M, Lagnado L. Spikes and ribbon synapses in early vision. Trends Neurosci 2013; 36:480-8. [DOI: 10.1016/j.tins.2013.04.006] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2013] [Revised: 04/18/2013] [Accepted: 04/18/2013] [Indexed: 01/01/2023]
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Zabouri N, Haverkamp S. Calcium channel-dependent molecular maturation of photoreceptor synapses. PLoS One 2013; 8:e63853. [PMID: 23675510 PMCID: PMC3652833 DOI: 10.1371/journal.pone.0063853] [Citation(s) in RCA: 60] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2012] [Accepted: 04/08/2013] [Indexed: 01/08/2023] Open
Abstract
Several studies have shown the importance of calcium channels in the development and/or maturation of synapses. The CaV1.4(α1F) knockout mouse is a unique model to study the role of calcium channels in photoreceptor synapse formation. It features abnormal ribbon synapses and aberrant cone morphology. We investigated the expression and targeting of several key elements of ribbon synapses and analyzed the cone morphology in the CaV1.4(α1F) knockout retina. Our data demonstrate that most abnormalities occur after eye opening. Indeed, scaffolding proteins such as Bassoon and RIM2 are properly targeted at first, but their expression and localization are not maintained in adulthood. This indicates that either calcium or the CaV1.4 channel, or both are necessary for the maintenance of their normal expression and distribution in photoreceptors. Other proteins, such as Veli3 and PSD-95, also display abnormal expression in rods prior to eye opening. Conversely, vesicle related proteins appear normal. Our data demonstrate that the CaV1.4 channel is important for maintaining scaffolding proteins in the ribbon synapse but less vital for proteins related to vesicular release. This study also confirms that in adult retinae, cones show developmental features such as sprouting and synaptogenesis. Overall we present evidence that in the absence of the CaV1.4 channel, photoreceptor synapses remain immature and are unable to stabilize.
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Affiliation(s)
- Nawal Zabouri
- Neuroanatomy, Max-Planck-Institute for Brain Research, Frankfurt am Main, Germany.
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Baden T, Berens P, Bethge M, Euler T. Spikes in Mammalian Bipolar Cells Support Temporal Layering of the Inner Retina. Curr Biol 2013; 23:48-52. [DOI: 10.1016/j.cub.2012.11.006] [Citation(s) in RCA: 110] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2012] [Revised: 10/25/2012] [Accepted: 11/02/2012] [Indexed: 11/29/2022]
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