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For: Hsu JCY, Yip CM. Molecular dynamics simulations of indolicidin association with model lipid bilayers. Biophys J 2007;92:L100-2. [PMID: 17416617 PMCID: PMC1877785 DOI: 10.1529/biophysj.107.108050] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
1
Lakic B, Beh C, Sarkar S, Yap SL, Cardoso P, Valery C, Hung A, Jones NC, Hoffmann SV, Blanch EW, Dyett B, Conn CE. Cubosome lipid nanocarriers for delivery of ultra-short antimicrobial peptides. J Colloid Interface Sci 2024;677:1080-1097. [PMID: 39137610 DOI: 10.1016/j.jcis.2024.07.232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Revised: 07/17/2024] [Accepted: 07/30/2024] [Indexed: 08/15/2024]
2
Fandiño-Devia E, Santa-González GA, Klaiss-Luna MC, Manrique-Moreno M. Study of the Membrane Activity of the Synthetic Peptide ∆M3 Against Extended-Spectrum β-lactamase Escherichia coli Isolates. J Membr Biol 2024;257:51-61. [PMID: 38315239 PMCID: PMC11006780 DOI: 10.1007/s00232-024-00306-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 01/03/2024] [Indexed: 02/07/2024]
3
Tryptophan, more than just an interfacial amino acid in the membrane activity of cationic cell-penetrating and antimicrobial peptides. Q Rev Biophys 2022;55:e10. [PMID: 35979810 DOI: 10.1017/s0033583522000105] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
4
Batista Araujo J, Sastre de Souza G, Lorenzon EN. Indolicidin revisited: biological activity, potential applications and perspectives of an antimicrobial peptide not yet fully explored. World J Microbiol Biotechnol 2022;38:39. [PMID: 35018535 DOI: 10.1007/s11274-022-03227-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Accepted: 01/02/2022] [Indexed: 11/29/2022]
5
Nielsen JE, Prévost SF, Jenssen H, Lund R. Impact of antimicrobial peptides on E. coli-mimicking lipid model membranes: correlating structural and dynamic effects using scattering methods. Faraday Discuss 2021;232:203-217. [DOI: 10.1039/d0fd00046a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
6
Non-Lytic Antibacterial Peptides That Translocate Through Bacterial Membranes to Act on Intracellular Targets. Int J Mol Sci 2019;20:ijms20194877. [PMID: 31581426 PMCID: PMC6801614 DOI: 10.3390/ijms20194877] [Citation(s) in RCA: 55] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2019] [Revised: 09/12/2019] [Accepted: 09/14/2019] [Indexed: 11/28/2022]  Open
7
Dwivedi R, Aggarwal P, Bhavesh NS, Kaur KJ. Design of therapeutically improved analogue of the antimicrobial peptide, indolicidin, using a glycosylation strategy. Amino Acids 2019;51:1443-1460. [PMID: 31485742 DOI: 10.1007/s00726-019-02779-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2019] [Accepted: 08/27/2019] [Indexed: 02/01/2023]
8
A biophysical study of the interactions between the antimicrobial peptide indolicidin and lipid model systems. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2019;1861:1355-1364. [DOI: 10.1016/j.bbamem.2019.04.003] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Revised: 03/22/2019] [Accepted: 04/07/2019] [Indexed: 12/19/2022]
9
Nielsen JE, Bjørnestad VA, Lund R. Resolving the structural interactions between antimicrobial peptides and lipid membranes using small-angle scattering methods: the case of indolicidin. SOFT MATTER 2018;14:8750-8763. [PMID: 30358793 DOI: 10.1039/c8sm01888j] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
10
Tsai CW, Lin ZW, Chang WF, Chen YF, Hu WW. Development of an indolicidin-derived peptide by reducing membrane perturbation to decrease cytotoxicity and maintain gene delivery ability. Colloids Surf B Biointerfaces 2018;165:18-27. [DOI: 10.1016/j.colsurfb.2018.02.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2017] [Revised: 01/30/2018] [Accepted: 02/03/2018] [Indexed: 11/28/2022]
11
Latza VM, Rodriguez-Loureiro I, Kiesel I, Halperin A, Fragneto G, Schneck E. Neutron Reflectometry Elucidates Protein Adsorption from Human Blood Serum onto PEG Brushes. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2017;33:12708-12718. [PMID: 29023130 DOI: 10.1021/acs.langmuir.7b03048] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
12
Mo GCH, Yip CM. Structural templating of J-aggregates: Visualizing bis(monoacylglycero)phosphate domains in live cells. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2017;1865:1687-1695. [PMID: 28844737 DOI: 10.1016/j.bbapap.2017.07.019] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Revised: 07/13/2017] [Accepted: 07/24/2017] [Indexed: 12/23/2022]
13
Tsai CW, Hu WW, Liu CI, Ruaan RC, Tsai BC, Jin SLC, Chang Y, Chen WY. The consideration of indolicidin modification to balance its hemocompatibility and delivery efficiency. Int J Pharm 2015;494:498-505. [DOI: 10.1016/j.ijpharm.2015.08.037] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2015] [Revised: 07/24/2015] [Accepted: 08/13/2015] [Indexed: 01/21/2023]
14
Bera S, Ghosh A, Sharma S, Debnath T, Giri B, Bhunia A. Probing the role of Proline in the antimicrobial activity and lipopolysaccharide binding of indolicidin. J Colloid Interface Sci 2015;452:148-159. [PMID: 25935286 DOI: 10.1016/j.jcis.2015.04.031] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2015] [Revised: 04/12/2015] [Accepted: 04/13/2015] [Indexed: 01/28/2023]
15
Esmaili E, Shahlaei M. Analysis of the flexibility and stability of the structure of magainin in a bilayer, and in aqueous and nonaqueous solutions using molecular dynamics simulations. J Mol Model 2015;21:73. [PMID: 25750019 DOI: 10.1007/s00894-015-2622-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2014] [Accepted: 02/15/2015] [Indexed: 11/25/2022]
16
3D hydrophobic moment vectors as a tool to characterize the surface polarity of amphiphilic peptides. Biophys J 2015;106:2385-94. [PMID: 24896117 DOI: 10.1016/j.bpj.2014.04.020] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2013] [Revised: 04/02/2014] [Accepted: 04/07/2014] [Indexed: 11/22/2022]  Open
17
Wang KF, Nagarajan R, Camesano TA. Differentiating antimicrobial peptides interacting with lipid bilayer: Molecular signatures derived from quartz crystal microbalance with dissipation monitoring. Biophys Chem 2014;196:53-67. [PMID: 25307196 DOI: 10.1016/j.bpc.2014.09.003] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2014] [Revised: 09/16/2014] [Accepted: 09/16/2014] [Indexed: 10/24/2022]
18
Leitgeb B. Characteristic Structural Features of Indolicidin: Effects of thecis-transIsomerism on its Conformation. Chem Biol Drug Des 2013;83:132-40. [DOI: 10.1111/cbdd.12238] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2013] [Revised: 09/03/2013] [Accepted: 09/23/2013] [Indexed: 11/29/2022]
19
Rahmanpour A, Ghahremanpour MM, Mehrnejad F, Moghaddam ME. Interaction of Piscidin-1 with zwitterionic versus anionic membranes: a comparative molecular dynamics study. J Biomol Struct Dyn 2013;31:1393-403. [DOI: 10.1080/07391102.2012.737295] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
20
Haney EF, Petersen AP, Lau CK, Jing W, Storey DG, Vogel HJ. Mechanism of action of puroindoline derived tryptophan-rich antimicrobial peptides. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2013;1828:1802-13. [DOI: 10.1016/j.bbamem.2013.03.023] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2013] [Revised: 03/24/2013] [Accepted: 03/25/2013] [Indexed: 02/06/2023]
21
Yeh IC, Ripoll DR, Wallqvist A. Free energy difference in indolicidin attraction to eukaryotic and prokaryotic model cell membranes. J Phys Chem B 2012;116:3387-96. [PMID: 22376120 DOI: 10.1021/jp211883u] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
22
Wang Y, Schlamadinger DE, Kim JE, McCammon JA. Comparative molecular dynamics simulations of the antimicrobial peptide CM15 in model lipid bilayers. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2012;1818:1402-9. [PMID: 22387432 DOI: 10.1016/j.bbamem.2012.02.017] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2011] [Revised: 02/01/2012] [Accepted: 02/15/2012] [Indexed: 10/28/2022]
23
Effect of antimicrobial peptide-amide: indolicidin on biological membranes. J Biomed Biotechnol 2011;2011:670589. [PMID: 21765635 PMCID: PMC3134306 DOI: 10.1155/2011/670589] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2011] [Revised: 03/24/2011] [Accepted: 04/29/2011] [Indexed: 11/18/2022]  Open
24
Nguyen LT, de Boer L, Zaat SAJ, Vogel HJ. Investigating the cationic side chains of the antimicrobial peptide tritrpticin: hydrogen bonding properties govern its membrane-disruptive activities. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2011;1808:2297-303. [PMID: 21641334 DOI: 10.1016/j.bbamem.2011.05.015] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2011] [Revised: 05/15/2011] [Accepted: 05/16/2011] [Indexed: 11/27/2022]
25
Fuzo CA, Degrève L. Study of the antimicrobial peptide indolicidin and mutants in eukaryotic modelled membrane by molecular dynamics simulations. Mol Phys 2011. [DOI: 10.1080/00268976.2010.520753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
26
Mondal J, Zhu X, Cui Q, Yethiraj A. Sequence-Dependent Interaction of β-Peptides with Membranes. J Phys Chem B 2010;114:13585-92. [DOI: 10.1021/jp1070242] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
27
Tsai HHG, Lee JB, Tseng SS, Pan XA, Shih YC. Folding and membrane insertion of amyloid-beta (25-35) peptide and its mutants: Implications for aggregation and neurotoxicity. Proteins 2010;78:1909-25. [DOI: 10.1002/prot.22705] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
28
Podorieszach AP, Huttunen-Hennelly HEK. The effects of tryptophan and hydrophobicity on the structure and bioactivity of novel indolicidin derivatives with promising pharmaceutical potential. Org Biomol Chem 2010;8:1679-87. [DOI: 10.1039/b921248e] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
29
Oreopoulos J, Yip CM. Combinatorial microscopy for the study of protein–membrane interactions in supported lipid bilayers: Order parameter measurements by combined polarized TIRFM/AFM. J Struct Biol 2009;168:21-36. [DOI: 10.1016/j.jsb.2009.02.011] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2008] [Revised: 02/23/2009] [Accepted: 02/24/2009] [Indexed: 02/06/2023]
30
Mo GCH, Yip CM. Supported lipid bilayer templated J-aggregate growth: role of stabilizing cation-pi interactions and headgroup packing. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2009;25:10719-10729. [PMID: 19645500 DOI: 10.1021/la901227h] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
31
Pimthon J, Willumeit R, Lendlein A, Hofmann D. Membrane association and selectivity of the antimicrobial peptide NK-2: a molecular dynamics simulation study. J Pept Sci 2009;15:654-67. [DOI: 10.1002/psc.1165] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
32
Waegele MM, Tucker MJ, Gai F. 5-Cyanotryptophan as an Infrared Probe of Local Hydration Status of Proteins. Chem Phys Lett 2009;478:249-253. [PMID: 20161057 DOI: 10.1016/j.cplett.2009.07.058] [Citation(s) in RCA: 83] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
33
Coupling molecular dynamics simulations with experiments for the rational design of indolicidin-analogous antimicrobial peptides. J Mol Biol 2009;392:837-54. [PMID: 19576903 DOI: 10.1016/j.jmb.2009.06.071] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2009] [Revised: 06/08/2009] [Accepted: 06/27/2009] [Indexed: 11/21/2022]
34
Fotakis C, Christodouleas D, Chatzigeorgiou P, Zervou M, Benetis NP, Viras K, Mavromoustakos T. Development of a CP 31P NMR broadline simulation methodology for studying the interactions of antihypertensive AT1 antagonist losartan with phospholipid bilayers. Biophys J 2009;96:2227-36. [PMID: 19289049 DOI: 10.1016/j.bpj.2008.11.057] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2008] [Revised: 10/30/2008] [Accepted: 11/20/2008] [Indexed: 11/16/2022]  Open
35
Zipfel PF, Reuter M. Complement Activation Products C3a and C4a as Endogenous Antimicrobial Peptides. Int J Pept Res Ther 2009. [DOI: 10.1007/s10989-009-9180-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
36
Fleming E, Maharaj NP, Chen JL, Nelson RB, Elmore DE. Effect of lipid composition on buforin II structure and membrane entry. Proteins 2009;73:480-91. [PMID: 18452210 DOI: 10.1002/prot.22074] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
37
Melo MN, Ferre R, Castanho MARB. Antimicrobial peptides: linking partition, activity and high membrane-bound concentrations. Nat Rev Microbiol 2009;7:245-50. [PMID: 19219054 DOI: 10.1038/nrmicro2095] [Citation(s) in RCA: 492] [Impact Index Per Article: 32.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
38
Cationic peptide-induced remodelling of model membranes: Direct visualization by in situ atomic force microscopy. J Struct Biol 2008;162:121-38. [DOI: 10.1016/j.jsb.2007.11.003] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2007] [Revised: 10/01/2007] [Accepted: 11/06/2007] [Indexed: 02/04/2023]
39
Langham AA, Ahmad AS, Kaznessis YN. On the nature of antimicrobial activity: a model for protegrin-1 pores. J Am Chem Soc 2008;130:4338-46. [PMID: 18335931 DOI: 10.1021/ja0780380] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
40
Khandelia H, Ipsen JH, Mouritsen OG. The impact of peptides on lipid membranes. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2008;1778:1528-36. [PMID: 18358231 DOI: 10.1016/j.bbamem.2008.02.009] [Citation(s) in RCA: 112] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2008] [Revised: 02/22/2008] [Accepted: 02/24/2008] [Indexed: 11/26/2022]
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