Growth rate as a link between microbial diversity and soil biogeochemistry

Measuring the growth rate of a microorganism is a simple yet profound way to quantify its effect on the world. The absolute growth rate of a microbial population reflects rates of resource assimilation, biomass production and element transformation-some of the many ways in which organisms affect Earth's ecosystems and climate. Microbial fitness in the environment depends on the ability to reproduce quickly when conditions are favourable and adopt a survival physiology when conditions worsen, which cells coordinate by adjusting their relative growth rate. At the population level, relative growth rate is a sensitive metric of fitness, linking survival and reproduction to the ecology and evolution of populations. Techniques combining omics and stable isotope probing enable sensitive measurements of the growth rates of microbial assemblages and individual taxa in soil. Microbial ecologists can explore how the growth rates of taxa with known traits and evolutionary histories respond to changes in resource availability, environmental conditions and interactions with other organisms. We anticipate that quantitative and scalable data on the growth rates of soil microorganisms, coupled with measurements of biogeochemical fluxes, will allow scientists to test and refine ecological theory and advance process-based models of carbon flux, nutrient uptake and ecosystem productivity. Measurements of in situ microbial growth rates provide insights into the ecology of populations and can be used to quantitatively link microbial diversity to soil biogeochemistry.

The chemical stoichiometry characteristics of plant-soil carbon and nitrogen in subtropical Pinus massoniana natural forests

Ecological stoichiometry is essential for understanding changes in ecosystem structure and nutrient cycling in forest ecosystems. However, the stoichiometric characteristics of carbon (C) and nitrogen (N) in different organs or layers, such as leaves, branches, trunks, roots, understory vegetation, litter, and soil within a forest ecosystem, have remained poorly understood. In this study, four age groups of Pinus massoniana natural forest including young, middle-aged, near-mature, and mature were selected as research subjects to illustrate the C and N stoichiometry interactions among different layers and organs in the forest ecosystem. The results showed that the average C and N concentrations in the leaves of the tree layer, shrub layer, and herb aboveground parts (HAP) were higher than that of other tree and shrub organs, as well as the herb underground parts (HUP), respectively. The N concentrations of tree branches and trunks showed a trend of increase first and decrease later from young to mature phases, but the C:N ratios presented an opposite trend. The C concentrations.in all tissues in shrubs showed a first decline and then a rise with age. As age progressed, the N concentration in each ecosystem layer increased gradually and demonstrated high synergy. The mineralization of organic matter in the soil was generally slow. The C concentrations in the understory vegetation layer were significantly positively correlated with the C concentrations in the litter layer but negatively correlated with the soil layer, and the C concentrations in the litter layer were also significantly negatively correlated with the C concentrations in the soil layer. The research findings can provide a reference basis for the formulation of nutrient regulation and sustainable management measures in the natural forests of P. massoniana in the study area.

The effects of N-addition on litter mixture effects depend on decomposition time: A case from mixed-litter decomposition in the Gurbantunggut Desert

Changes in nitrogen (N) deposition and litter mixtures have been shown to influence ecosystem processes such as litter decomposition. However, the interactive effects of litter mixing and N-deposition on decomposition process in desert regions remain poorly identified. We assessed the simultaneous effects of both N addition and litter mixture on mass loss in a litterbag decomposition experiment using six native plants in single-species samples with diverse quality and 14-species combinations in the Gurbantunggut Desert under two N addition treatments (control and N addition). The N addition had no significant effect on decomposition rate of single-species litter (expect Haloxylon ammodendron), whereas litter mass loss and decomposition rate differed significantly among species, with variations positively correlated with initial phosphorus concentration and negatively correlated with initial lignin concentration. After 18 months, the average mass loss across litter mixtures did not overall differ from those predicted from single species either in control or N addition treatments, that is, mixing of different species had no non-additive effects on decomposition. The N addition, however, did modify the direction of mixture effects and interacted with incubation time. Added N transformed synergistic effects of litter mixtures to antagonistic effects on mass loss after 1 month of decomposition, while transforming neutral effects of litter mixture to synergistic effects after 6 months of decomposition. Our results demonstrated that initial chemical properties played an important role in litter decomposition, while no effects of litter mixture on decomposition process in this desert region. The N addition altered the litter mixture effects on mass loss with incubation time, implying that increased N deposition in the future may have profound effects on carbon turnover to a greater extent than previously thought in desert ecosystems.

Impacts of insect frass and cadavers on soil surface litter decomposition along a tropical forest temperature gradient

Insect herbivores play important roles in shaping many ecosystem processes, but how climate change will alter the effects of insect herbivory are poorly understood. To address this knowledge gap, we quantified for the first time how insect frass and cadavers affected leaf litter decomposition rates and nutrient release along a highly constrained 4.3°C mean annual temperature (MAT) gradient in a Hawaiian montane tropical wet forest. We constructed litterbags of standardized locally sourced leaf litter, with some amended with insect frass + cadavers to produce treatments designed to simulate ambient (Control = no amendment), moderate (Amended-Low = 2 × Control level), or severe (Amended-High = 11 × Control level) insect outbreak events. Multiple sets of these litterbags were deployed across the MAT gradient, with individual litterbags collected periodically over one year to assess how rising MAT altered the effects of insect deposits on litter decomposition rates and nitrogen (N) release. Increased MAT and insect inputs additively increased litter decomposition rates and N immobilization rates, with effects being stronger for Amended-High litterbags. However, the apparent temperature sensitivity (Q 10) of litter decomposition was not clearly affected by amendments. The effects of adding insect deposits in this study operated differently than the slower litter decomposition and greater N mobilization rates often observed in experiments which use chemical fertilizers (e.g., urea, ammonium nitrate). Further research is required to understand mechanistic differences between amendment types. Potential increases in outbreak-related herbivore deposits coupled with climate warming will accelerate litter decomposition and nutrient cycling rates with short-term consequences for nutrient cycling and carbon storage in tropical montane wet forests.

Nitrogen and phosphorus addition exerted different influences on litter and soil carbon release in a tropical forest

Terrestrial soils release large amount of carbon dioxide (CO₂) each year, which are mainly derived from litter and soil carbon (C) decomposition. Nutrient availability, especially nitrogen (N) and phosphorus (P), plays an important role in both litter and soil C decomposition. Therefore, understanding the underlying mechanism is crucial for mitigating CO₂ emission and climate changes. Here, we assessed patterns of litter and soil C decomposition after 11 yrs. in-situ N and P addition in a tropical forest where corn leaves or corn roots were added as litter C. The total CO₂ efflux was quantified and partitioned using ¹³C isotope signatures to determine the sources (litter or soil C) every three months. In addition, Changes in C-degrading enzyme activities: β-1,4-glucosidase (BG), phenol oxidase (PHO) and peroxidase (PER), and microbial biomarkers were assessed to interpret the underlying mechanism. Total C-release was enhanced up to17% by the long-term N addition but inhibited up to 15% by P addition. Precisely, N addition only accelerated the litter decomposition and increased about 42% and 6% of the litter C release at 0-5 cm and 5-10 cm soil depths, respectively; while P addition only impeded the soil C decomposition and decreased about 9% and 11% of the soil C release at 0-5 cm and 5-10 cm, respectively. The enhanced C release under N addition might be attributed to the enhanced microbial biomass, the ratio of fungi to bacteria and C-degrading enzyme activities. However, P addition resulted in the reverse result in microbial properties and C-degrading enzyme activities, associated with a decreased C release. Our study suggests that the long-term N and P addition selectively affected the litter and soil C decomposition because of their different physiochemical properties and this tendency might be more pronounced in tropical forests exposed to increasing atmospheric N deposition in the future. The study indicates that the different patterns of litter and soil C decomposition under climate change should be taken account in the future C management strategies.

Patterns of microbial communities were shaped by bioavailable P along the elevation gradient of Shergyla Mountain, as determined by analysis of phospholipid fatty acids

The distribution pattern of the microbial community in mountains is an important component of biodiversity research. Many environmental factors vary significantly with elevation on a relatively small scale in subalpine and alpine environments. These factors may markedly affect microbial community composition and function. In this study, we analyzed phospholipid fatty acid (PLFA) profiles and phosphorus (P) fractions in soils from 9 sites along an elevation gradient (3500–4100 m above sea level (a.s.l.)) of the Shergyla Mountain, Tibet in China. Many biomarker PLFAs indicated that there were biogeochemical trends of the microbial distribution patterns of some soil microorganisms, which were most often increasing, U-shaped and unimodal trends along the elevation gradient. A redundancy analysis (RDA) and correlations indicated that P factors (e.g., Resin-Pi, NaHCO₃-Pi and NaHCO₃-Po) were more important in controlling the microbial PLFA distribution pattern than other factors (e.g., MAT, MAP, pH, TOC, TN and soil moisture) in this study area. Microorganisms are strongly associated with P fractions. Our results suggested that microbial communities were subjected to P stresses and that the distribution patterns of microbial communities were shaped by bioavailable P along the elevation gradient. Our work also hints that P geochemical processes drive the microbial diversity of the Shergyla Mountains.

Response of litter decomposition and the soil environment to one-year nitrogen addition in a Schrenk spruce forest in the Tianshan Mountains, China

Human activities have increased the input of nitrogen (N) to forest ecosystems and have greatly affected litter decomposition and the soil environment. But differences in forests with different nitrogen deposition backgrounds. To better understand the response of litter decomposition and soil environment of N-limited forest to nitrogen deposition. We established an in situ experiment to simulate the effects of N deposition on soil and litter ecosystem processes in a Picea schrenkiana forest in the Tianshan Mountains, China. This study included four N treatments: control (no N addition), low N addition (LN: 5 kg N ha^-1 a^-1), medium N addition (MN: 10 kg N ha^-1 a^-1) and high N addition (HN: 20 kg N ha^-1 a^-1). Our results showed that N addition had a significant effect on litter decomposition and the soil environment. Litter mass loss in the LN treatment and in the MN treatment was significantly higher than that in the control treatment. In contrast, the amount of litter lost in the HN treatment was significantly lower than the other treatments. N application inhibited the degradation of lignin but promoted the breakdown of cellulose. The carbon (C), N, and phosphorus (P) contents of litter did not differ significantly among the treatments, but LN promoted the release of C and P. Our results also showed that soil pH decreased with increasing nitrogen application rates, while soil enzyme activity showed the opposite trend. In addition, the results of redundancy analysis (RDA) and correlation analyses showed that the soil environment was closely related to litter decomposition. Soil enzymes had a positive effect on litter decomposition rates, and N addition amplified these correlations. Our study confirmed that N application had effects on litter decomposition and the soil environment in a N-limited P. schrenkiana forest. LN had a strong positive effect on litter decomposition and the soil environment, while HN was significantly negative. Therefore, increased N deposition may have a negative effect on material cycling of similar forest ecosystems in the near future.

Can the impact of canopy trees on soil and understory be altered using litter additions?

Trees can have large effects on soil nutrients in ways that alter succession, particularly in the case of nitrogen-(N)-fixing trees. In Hawai'i, forest restoration relies heavily on use of a native N-fixing tree, Acacia koa (koa), but this species increases soil-available N and likely facilitates competitive dominance of exotic pasture grasses. In contrast, Metrosideros polymorpha ('ōhi'a), the dominant native tree in Hawai'i, is less often planted because it is slow growing; yet it is typically associated with lower soil N and grass biomass, and greater native understory recruitment. We experimentally tested whether it is possible to reverse high soil N under koa by adding 'ōhi'a litter, using additions of koa litter or no litter as controls, over 2.5 yr. We then quantified natural litterfall and decomposition rates of 'ōhi'a and koa litter to place litter additions in perspective. Finally, we quantified whether litter additions altered grass biomass and if this had effects on native outplants. Adding 'ōhi'a litter increased soil carbon, but increased rather than decreased inorganic soil N pools. Contrary to expectations, koa litter decomposed more slowly than 'ōhi'a, although it released more N per unit of litter. We saw no reduction in grass biomass due to 'ōhi'a litter addition, and no change in native outplanted understory survival or growth. We conclude that the high N soil conditions under koa are difficult to reverse. However, we also found that outplanted native woody species were able to decrease exotic grass biomass over time, regardless of the litter environment, making this a better strategy for lowering exotic species impacts.

Tree Diversity, Initial Litter Quality, and Site Conditions Drive Early-Stage Fine-Root Decomposition in European Forests

Decomposition of dead fine roots contributes significantly to nutrient cycling and soil organic matter stabilization. Most knowledge of tree fine-root decomposition stems from studies in monospecific stands or single-species litter, although most forests are mixed. Therefore, we assessed how tree species mixing affects fine-root litter mass loss and which role initial litter quality and environmental factors play. For this purpose, we determined fine-root decomposition of 13 common tree species in four European forest types ranging from boreal to Mediterranean climates. Litter incubations in 315 tree neighborhoods allowed for separating the effects of litter species from environmental influences and litter mixing (direct) from tree diversity (indirect). On average, mass loss of mixed-species litter was higher than those of single-species litter in monospecific neighborhoods. This was mainly attributable to indirect diversity effects, that is, alterations in microenvironmental conditions as a result of tree species mixing, rather than direct diversity effects, that is, litter mixing itself. Tree species mixing effects were relatively weak, and initial litter quality and environmental conditions were more important predictors of fine-root litter mass loss than tree diversity. We showed that tree species mixing can alter fine-root litter mass loss across large environmental gradients, but these effects are context-dependent and of moderate importance compared to environmental influences. Interactions between species identity and site conditions need to be considered to explain diversity effects on fine-root decomposition.

Long-term fertilization modifies the mineralization of soil organic matter in response to added substrate

The turnover of SOC in soils is strongly influenced by the availability of substrate and nutrients, especially nitrogen (N) and phosphorus (P). Here, we assessed how long-term fertilization modified SOM mineralization in response to added substrate in a tropical forest. We carried out a 90-day incubation study in which we added two structurally similar compounds which differed in microbial metabolic availability: corn cellulose or corn starch to soils collected from a long-term (11 years) factorial N and P fertilization experiment site in a tropical forest in south China. We measured total soil mineralization rate (CO₂ efflux) to characterize SOM mineralization and using ¹³C isotope signatures to determine the source of the CO₂ (original soil C or added substrate) and assessed changes in extracellular enzyme activities: acid phosphomonoesterase (AP), β-1,4-glucosidase (BG), β-1,4- N-acetaminophen glucosidase (NAG), phenol oxidase (PHO) and peroxidase (PER), and microbial biomarkers to determine whether nutrient stoichiometry and decomposer communities explain differences in SOM mineralization rates. Total C mineralization increased substantially with substrate addition, particularly cellulose (5.38, 7.13, 5.58 and 5.37 times for N, P, NP fertilization and CK, respectively) compared to no substrate addition, and original soil C mineralization was further enhanced in long-term N (3.40% and 5.18% for cellulose and starch addition, respectively) or NP (35.11% for cellulose addition) fertilized soils compared to control treatment. Enzyme activities were stimulated by the addition of both substrates but suppressed by P-fertilization. Addition of both substrates increased microbial investment in P-acquisition, but only starch addition promoted C investment in N-acquisition. Finally, fungal abundance increased with substrate addition to a greater extent than bacterial abundance, particularly in cellulose-amended soils, and the effect was amplified by long-term fertilization. Our findings indicate that SOM mineralization might be enhanced in N and P enrichment ecosystems, since the litter input can liberate microbes from C limitation and stimulate SOM mineralization if N and P are sufficient. Our study further demonstrates that structurally similar substrates can have distinct effects on SOM mineralization and the extent of SOM mineralization is strongly dependent on elemental stoichiometry, as well as the resource requirements of microbial decomposers.

Fresh litter acts as a substantial phosphorus source of plant species appearing in primary succession on volcanic ash soil

Plants have difficulty absorbing phosphorus from volcanic ash soils owing to the adsorption of phosphorus by aluminum and iron in the soils. Thus, on volcanic ash soils, the phosphorus source for natural vegetation is expected to be organic matter, however, there is a lack of experimental evidence regarding this occurrence. Here, we studied the effect of organic matter on plant growth of some species that occur in primary successions of volcanic ash soil ecosystems, based on growth experiments and chemical analyses. We found that a large amount of inorganic phosphorus (but only a limited amount of inorganic nitrogen) is leached from fresh leaf litter of the pioneer spices Fallopia japonica at the initial stage of litter decomposition. Phosphorus from the fresh litter specifically activated the growth of subsequently invading nitrogen-fixing alder when immature volcanic soil was used for cultivation. In contrast, old organic matter in mature soil was merely a minor source of phosphorus. These results suggest that fresh litter of F. japonica is essential for growth of nitrogen-fixing alder because the litter supplies phosphorus. We consider that rapid phosphorus cycles in fresh litter-plant systems underlie the productivity of natural vegetation even in mature ecosystems established on volcanic ash soils.

Diversity of putative ericoid mycorrhizal fungi increases with soil age and progressive phosphorus limitation across a 4.1-million-year chronosequence

Ericaceous plants rely on ericoid mycorrhizal fungi for nutrient acquisition. However, the factors that affect the composition and structure of fungal communities associated with the roots of ericaceous plants remain largely unknown. Here, we use a 4.1-million-year (myr) soil chronosequence in Hawaii to test the hypothesis that changes in nutrient availability with soil age determine the diversity and species composition of fungi associated with ericoid roots. We sampled roots of a native Hawaiian plant, Vaccinium calycinum, and used DNA metabarcoding to quantify changes in fungal diversity and community composition. We also used a fertilization experiment at the youngest and oldest sites to assess the importance of nutrient limitation. We found an increase in diversity and a clear pattern of species turnover across the chronosequence, driven largely by putative ericoid mycorrhizal fungi. Fertilization with nitrogen at the youngest site and phosphorus at the oldest site reduced fungal diversity, suggesting a direct role of nutrient limitation. Our results also reveal the presence of novel fungal species associated with Hawaiian Ericaceae and suggest a greater importance of phosphorus availability for communities of ericoid mycorrhizal fungi than is generally assumed.

Seasonal Variations in Carbon, Nitrogen, and Phosphorus Stoichiometry of a Robinia pseudoacacia Plantation on the Loess Hilly Region, China

Seasonal variations in stoichiometry are a crucial regulatory mechanism for plant communities that respond to environmental changes. However, the seasonal characteristics of stoichiometry in plants, litter, and soil are poorly understood, especially in plantation ecosystems. Therefore, we explored the seasonal variations of C, N, and P contents and ratios between plants, litter, and soil of a Robinia pseudoacacia plantation on the Loess Plateau in China in 2017. The results indicate that the C, N, P contents and ratios in plants, litter and soil showed different seasonal patterns. The N and P contents of tree and shrub leaves substantially decreased over the growing season, while the C:N, C:P, and N:P ratios exhibited the opposite trend. The utilization efficiency of the N and P elements by trees and shrubs gradually increased with the change of the growing season. These results suggest that the C:N:P stoichiometry of plants was more sensitive to seasonal changes than the litter and soil; therefore, the potential impacts of time should be considered when using stoichiometry to explore the utilization of plant nutrients. Additionally, the P content between tree leaves and soil and the N content between herb leaves and soil were significantly positively correlated, indicating that the growth of the tree and herb layer in the R. pseudoacacia plantation in the area was restricted by P and N, respectively. Meanwhile, the N content in the leaves between trees and herbs showed a significant negative correlation, indicating that N competition existed between R. pseudoacacia and understory herbs, which was not conducive to the effective use of environmental resources by the R. pseudoacacia plantation ecosystem. This study contributes to vegetation restoration and plantation management on the Loess Plateau and provides basic information for global stoichiometric analyses.

Mycorrhizal and environmental controls over root trait-decomposition linkage of woody trees

Traits are critical in predicting decomposition that fuels carbon and nutrient cycling in ecosystems. However, our understanding of root trait-decomposition linkage, and especially its dependence on mycorrhizal type and environmental context, remains limited. We explored the control of morphological and chemical (carbon- and nutrient-related) traits over decomposition of absorptive roots in 30 tree species associated with either arbuscular mycorrhizal (AM) or ectomycorrhizal (ECM) fungi in temperate and subtropical forests in China. Carbon-related traits (acid-unhydrolysable residue (AUR) and cellulose concentrations) had predominant control of root decomposition in AM species while nutrient-related traits (magnesium concentration) predominately controlled that in ECM species. Thicker absorptive roots decomposed faster in AM species as a result of their lower AUR concentrations, but more slowly in ECM angiosperm species potentially as a result of their higher magnesium concentrations. Root decomposition was linked to root nutrient economy in both forests while root diameter-decomposition coordination emerged only in the subtropical forest where root diameter and decomposition presented similar cross-species variations. Our findings suggest that root trait-decomposition linkages differ strongly with mycorrhizal type and environment, and that root diameter can predict decomposition but in opposing directions and with contrasting mechanisms for AM and ECM species.

Five-year study on the effects of warming and plant litter quality on litter decomposition rate in a Tibetan alpine grassland

The decomposition of plant litter is a key link in global C budgets and provides strong feedback to changes in climate and biogeochemical cycles. However, the combined effects of global warming and plant litter quality on the rate of plant litter decomposition and nutrient dynamics in alpine ecosystems are still poorly understood. We conducted a warming experiment to investigate the effects of litter quality and temperature on decomposition rates and variations in nutrients of four common herbaceous plants (low-quality litter species Stipa purpurea and Carex moorcroftii and high-quality litter species Astragalus confertus and Leontopodium nanum) during 2011-2016. During the initial stages of decomposition, warming had no significant effect on the mass loss of plant litter for low-quality litter species, but in the later stages of decomposition, it had a negative effect on the mass loss across all species (P < 0.05). Litter quality was the best predictor of N and P release/immobilisation during the decomposition of aboveground plant litter. Low-quality litter had the highest immobilisation of N at about 80% of the initial remaining mass; nutrients were then released in the following stages of decomposition. However, the fraction of initial P decreased with the mass remaining during the initial and later phases of decomposition, but a short period of P immobilisation occurred in the middle phase of decomposition. For high-quality litter, the fraction of initial N and P decreased with the mass remaining during the whole decomposition process. Warming had a marginal influence on the N and P dynamics throughout the decomposition process. Our study showed that the decay of plant litter was strongly suppressed by warming climate and that the N and P dynamics on the investigated Tibetan grassland were mainly regulated by litter quality, providing valuable insights into the biogeochemical cycles of nutrients in alpine ecosystems.

Spartina alterniflora Leaf and Soil Eco-Stoichiometry in the Yancheng Coastal Wetland

Carbon, nitrogen, and phosphorus-nutrient and restrictive elements for plant growth and important components of the plant body-are mainly transferred and exchanged between plants and the soil environment. Changes in the carbon, nitrogen, and phosphorus eco-stoichiometry greatly impact the growth and expansion of Spartina alterniflora, and understanding these changes can reveal the nutrient coordination mechanism among ecosystem components. To explore the relationship between leaf and soil eco-stoichiometry and determine the key soil factors that affect leaf eco-stoichiometry, we collected leaf and soil samples of S. alterniflora at different tidal levels (i.e., 1, 3, and 5 km away from the coastline) in a coastal wetland in the Yancheng Elk Nature Reserve, Jiangsu province. We measured the leaf and soil carbon, nitrogen, and phosphorus contents and ratios, as well as the soil salinity and soil organic carbon. The results revealed the following. (1) The leaf stoichiometric characteristics and soil properties of S. alterniflora differed significantly between tidal levels; for example, total carbon, nitrogen, soil organic carbon were detected at their highest levels at 3 km and lowest levels at 5 km. (2) Significant correlations were detected between the leaf stoichiometric characteristics and soil characteristics. Additionally, nitrogen limitation was evident in the study area, as indicated by the nitrogen-phosphorus ratio being less than 14 and the soil nitrogen-phosphorus ratio being less than 1. (3) Soil salinity and the soil carbon-nitrogen ratio were shown to be the key factors that affect the eco-stoichiometric characteristics of S. alterniflora. These findings furthered our understanding of the nutrient distribution mechanisms and invasion strategy of S. alterniflora and can thus be used to guide S. alterniflora control policies formulated by government management departments in China.

Microbial processing of plant remains is co-limited by multiple nutrients in global grasslands

Microbial processing of aggregate-unprotected organic matter inputs is key for soil fertility, long-term ecosystem carbon and nutrient sequestration and sustainable agriculture. We investigated the effects of adding multiple nutrients (nitrogen, phosphorus and potassium plus nine essential macro- and micro-nutrients) on decomposition and biochemical transformation of standard plant materials buried in 21 grasslands from four continents. Addition of multiple nutrients weakly but consistently increased decomposition and biochemical transformation of plant remains during the peak-season, concurrent with changes in microbial exoenzymatic activity. Higher mean annual precipitation and lower mean annual temperature were the main climatic drivers of higher decomposition rates, while biochemical transformation of plant remains was negatively related to temperature of the wettest quarter. Nutrients enhanced decomposition most at cool, high rainfall sites, indicating that in a warmer and drier future fertilized grassland soils will have an even more limited potential for microbial processing of plant remains.

Leaf litter contributes more to soil organic carbon than fine roots in two 10-year-old subtropical plantations

Although many reports assume a strong relationship between plant litter inputs and soil organic carbon (SOC) accumulation, there is limited experimental evidence in support of this relationship. The Detritus Input and Removal Transfer (DIRT) experiment was conducted in two subtropical plantations, an Acacia crassicarpa monoculture (AC) and a Eucalyptus urophylla monoculture (EU), to assess the importance of leaf litter and fine roots for SOC content over a 6-year period. The SOC content in 0-10 cm soil layer was significantly reduced by litter removal (NL) or by removal of both litter and roots (NI), but the influence of root removal (NR) was only marginal. The AC forest had a much higher annual rate of litter production and a lower decomposition rate than the EU forest, but carbon release from plant litter did not significantly differ between the two forests. These results help explain why the SOC content did not differ between the two forests. Our findings suggest that plant leaf litter is more important than roots in maintaining the balance of the SOC pool in subtropical forest plantations.

Responses of Litter Decomposition and Nutrient Dynamics to Nitrogen Addition in Temperate Shrublands of North China

Plant litter decomposition is a crucial ecosystem process that regulates nutrient cycling, soil fertility, and plant productivity and is strongly influenced by increased nitrogen (N) deposition. However, the effects of exogenous N input on litter decomposition are still poorly understood, especially in temperate shrublands, which hinders predictions of soil C and nutrient dynamics under the context of global change. Temperate shrub ecosystems are usually N-limited and particularly sensitive to changes in exogenous N input. To investigate the responses of Vitex negundo and Spiraea trilobata litter decomposition to N addition, we conducted a field experiment in Vitex- and Spiraea-dominated shrublands located on Mt. Dongling in Beijing, North China. Four N treatment levels were applied: control (N₀; no N addition), low N (N₁; 20 kg⋅N⋅ha^-1⋅year^-1), moderate N (N₂; 50 kg⋅N⋅ha^-1⋅year^-1), and high N (N₃; 100 kg⋅N⋅ha^-1⋅year^-1). The litter decomposition in V. negundo was faster than that in S. trilobata, which may be due to the differences in their nutrient content and C/N ratio. N addition increased the amount of remaining N in the two litter types but had no effect on the remaining mass, C, or P. Nitrogen treatment did not affect the litter decomposition rates (k) of either litter type; i.e., N addition had no effect on litter decomposition in temperate shrublands. The neutral effect of N addition on litter decomposition may be primarily explained by the low temperatures and P limitation at the site as well as the opposing effects of the exogenous inorganic N, whereby exogenous N inhibits lignin degradation but promotes the decomposition of readily decomposed litter components. These results suggest that short-term N deposition may have a significant impact on N cycling but not C or P cycling in such shrub ecosystems.

Soil and fine roots ecological stoichiometry in different vegetation restoration stages in a karst area, southwest China

The cyclic process of carbon (C), nitrogen (N), and phosphorus (P) elements is an important factor affecting the function of the forest ecosystem. However, the relation between soil and root stoichiometric ratios, especially in karst areas with extremely fragile geology and intensive human disturbance has rarely been investigated. In the current study the concentrations of C, N, and P and their stoichiometric characteristics were investigated using sequential soil coring under different stages of vegetation restoration (primary forest, secondary forest, shrubland and grassland) and soil layer (0-10 cm, 10-20 cm, 20-30 cm) in fine root and soil samples. The results showed that total C concentration had no significant change in all four vegetation types and three soils layer in the fine root, whereas total N and P concentration reached the maximum value in secondary forest and the minimum in grassland. In addition, soil organic C (SOC) and total N increased continuously with natural succession and decreased with soil depth. Secondary forest showed the largest total P concentration in soil, with the smallest corresponding to grassland. Furthermore, both vegetation type and soil layer significantly affected soil C, N, and P stoichiometric ratios. There was a positive correlation among C, N and P in the fine roots, as well as in the soil. While fine root C:N and C:P ratios were negatively related to soil C:N and C:P, fine root N:P was significantly related to soil N:P. This study can provide a scientific basis for the restoration of fragile ecosystem vegetation and for comprehensive treatment of rocky desertification in karst.

Long-term N and S addition and changed litter chemistry do not affect trembling aspen leaf litter decomposition, elemental composition and enzyme activity in a boreal forest

The effect of long-term nitrogen (N) and sulfur (S) deposition on litter mass loss and changes in carbon (C), N, and S composition and enzyme activities during litter decomposition was investigated in a boreal forest. This study included four N × S treatments: control (CK), N application (30 kg N ha^-1 yr^-1), S application (30 kg S ha^-1 yr^-1), and N plus S application (both at 30 kg ha^-1 yr^-1). Two experiments were conducted for 22 months: 1) a common litter decomposition experiment with litter bags containing a common litter (same litter chemistry) and 2) an in-situ litter decomposition experiment with litter from each treatment plot (and thus having different litter chemistry). Litterbags were placed onto the four treatment plots to investigate the direct effect of N and S addition and the combined effect of N and/or S addition and litter chemistry on litter decomposition, respectively. Regardless of the source of litter, N and/or S addition affected C, N and S composition at a certain period of the experiment but did not affect litter mass loss and enzyme activity throughout the experiment, indicating that the N and S addition rates were below the critical level required to affect C and N cycling in the studied ecosystem. However, the greater change in N composition per unit of litter mass loss in the N addition treatment than in the other treatments in the common litter but not in the in-situ litter experiment, suggests that the effect of N addition on N loss and retention depends on the initial litter chemistry. We conclude that the studied N and S addition rates did not affect litter decomposition and elemental cycling in the studied forest ecosystem even though the N and S addition rates were much greater than their ambient deposition rates.

Litter Traits of Native and Non-Native Tropical Trees Influence Soil Carbon Dynamics in Timber Plantations in Panama

Tropical reforestation initiatives are widely recognized as a key strategy for mitigating rising atmospheric CO2 concentrations. Although rapid tree growth in young secondary forests and plantations sequesters large amounts of carbon (C) in biomass, the choice of tree species for reforestation projects is crucial, as species identity and diversity affect microbial activity and soil C cycling via plant litter inputs. The decay rate of litter is largely determined by its chemical and physical properties, and trait complementarity of diverse litter mixtures can produce non-additive effects, which facilitate or delay decomposition. Furthermore, microbial communities may preferentially decompose litter from native tree species (homefield advantage). Hence, information on how different tree species influence soil carbon dynamics could inform reforestation efforts to maximize soil C storage. We established a decomposition experiment in Panama, Central America, using mesocosms and litterbags in monoculture plantations of native species (Dalbergia retusa Hemsl. and Terminalia amazonia J.F.Gmel., Exell) or teak (Tectona grandis L.f.) to assess the influence of different litter types and litter mixtures on soil C dynamics. We used reciprocal litter transplant experiments to assess the homefield advantage and litter mixtures to determine facilitative or antagonistic effects on decomposition rates and soil respiration in all plantation types. Although litter properties explained some of the variation in decomposition, the microclimate and soil properties in the plantations also played an important role. Microbial biomass C and litter decomposition were lower in Tectona than in the native plantations. We observed non-additive effects of mixtures with Tectona and Dalbergia litter on both decomposition and soil respiration, but the effect depended on plantation type. Further, there was a homefield disadvantage for soil respiration in Tectona and Terminalia plantations. Our results suggest that tree species diversity plays an important role in the resilience of tropical soils and that plantations with native tree species could help maintain key processes involved in soil carbon sequestration.

Fertilizer N application rate impacts plant-soil feedback in a sanqi production system

Replant failure caused by negative plant-soil feedback (NPFS) in agricultural ecosystems is a critical factor restricting the development of sustainable agriculture. Soil nutrient availability has the capacity to affect plant-soil feedback. Here, we used sanqi (Panax notoginseng), which is severely threatened by NPSF, as a model plant to decipher the overall effects of nitrogen (N) rates on NPSF and the underlying mechanism. We found that a high rate of N at 450kgNha^-1 (450N) aggravated the NPSF through the accumulation of pathogens in the soil compared with the optimal 250N. The increased N rates resulted in a significant increase in the soil electrical conductivity and available nitrogen but a decrease in the soil pH and C/N ratio. GeoChip 5.0 data demonstrated that these changed soil properties caused the soil to undergo stress (acidification, salinization and carbon starvation), as indicated by the enriched soil microbial gene abundances related to stress response and nutrition cycling (N, C and S). Accordingly, increased N rates reduced the richness and diversity of soil fungi and bacteria and eventually caused a shift in soil microbes from a bacterial-dominant community to a fungal-dominant community. In particular, the high 450N treatment significantly suppressed the abundance of copiotrophic bacteria, including beneficial genera Bacillus and Pseudomonas, thus weakening the antagonistic activity of these bacteria against fungal pathogens. Moreover, 450N application significantly enriched the abundance of pathogen pathogenicity-related genes. Once sanqi plants were grown in this N-stressed soil, their host-specific fungal pathogen Fusarium oxysporum significantly accumulated, which aggravated the process of NPSF. This study suggested that over-application of nitrogen is not beneficial for disease management or the reduction of fungicide application in agricultural production.

Long-term N and P additions alter the scaling of plant nitrogen to phosphorus in a Tibetan alpine meadow

Nitrogen and phosphorus are two important nutrient elements for plants. The current paradigm suggests that the scaling of plant tissue N to P is conserved across environments and plant taxa because these two elements are coupled and coordinately change with each other following a constant allometric trajectory. However, this assumption has not been vigorously examined, particularly in changing N and P environments. We propose that changes in relative availability of N and P in soil alter the N to P relationship in plants. Taking advantage of a 4-yr N and P addition experiment in a Tibetan alpine meadow, we examined changes in plant N and P concentrations of 14 common species. Our results showed that while the scaling of N to P under N additions was similar to the previously reported pattern with a uniform 2/3 slope of the regression between log N and log P, it was significantly different under P additions with a smaller slope. Also, graminoids had different responses from forbs. These results indicate that the relative availability of soil N and P is an important determinant regulating the N and P concentrations in plants. These findings suggest that alterations in the N to P relationships may not only alter plant photosynthate allocation to vegetative or reproductive organs, but also regulate the metabolic and growth rate of plant and promote shifts in plant community composition in a changing nutrient loading environment.

Elevated ozone affects C, N and P ecological stoichiometry and nutrient resorption of two poplar clones

The effects of elevated ozone on C (carbon), N (nitrogen) and P (phosphorus) ecological stoichiometry and nutrient resorption in different organs including leaves, stems and roots were investigated in poplar clones 546 (P. deltoides cv. '55/56' × P. deltoides cv. 'Imperial') and 107 (P. euramericana cv. '74/76') with a different sensitivity to ozone. Plants were exposed to two ozone treatments, NF (non-filtered ambient air) and NF60 (NF with targeted ozone addition of 60 ppb), for 96 days in open top chambers (OTCs). Significant ozone effects on most variables of C, N and P ecological stoichiometry were found except for the C concentration and the N/P in different organs. Elevated ozone increased both N and P concentrations of individual organs while for C/N and C/P ratios a reduction was observed. On these variables, ozone had a greater effect for clone 546 than for clone 107. N concentrations of different leaf positions ranked in the order upper > middle > lower, showing that N was transferred from the lower senescent leaves to the upper ones. This was also indicative of N resorption processes, which increased under elevated ozone. N resorption of clone 546 was 4 times larger than that of clone 107 under ambient air (NF). However, elevated ozone (NF60) had no significant effect on P resorption for both poplar clones, suggesting that their growth was only limited by N, while available P in the soil was enough to sustain growth. Understanding ecological stoichiometric responses under ozone stress is crucial to predict future effects on ecological processes and biogeochemical cycles.

Stoichiometric plasticity of microbial communities is similar between litter and soil in a tropical rainforest

Heterotrophic microorganisms are commonly thought to be stoichiometrically homeostatic but their stoichiometric plasticity has rarely been examined, particularly in terrestrial ecosystems. Using a fertilization experiment in a tropical rainforest, we evaluated how variable substrate stoichiometry may influence the stoichiometry of microbial communities in the leaf litter layer and in the underlying soil. C:N:P ratios of the microbial biomass were higher in the organic litter layer than in the underlying mineral soil. Regardless of higher ratios for litter microbial communities, C, N, and P fertilization effects on microbial stoichiometry were strong in both litter and soil, without any fundamental difference in plasticity between these two communities. Overall, N:P ratios were more constrained than C:nutrient ratios for both litter and soil microbial communities, suggesting that stoichiometric plasticity arises because of a decoupling between C and nutrients. Contrary to the simplifying premise of strict homeostasis in microbial decomposers, we conclude that both litter and soil communities can adapt their C:N:P stoichiometry in response to the stoichiometric imbalance of available resources.

Altitudinal patterns and controls of plant and soil nutrient concentrations and stoichiometry in subtropical China

Altitude is a determining factor of ecosystem properties and processes in mountains. This study investigated the changes in the concentrations of carbon (C), nitrogen (N), and phosphorus (P) and their ratios in four key ecosystem components (forest floor litter, fine roots, soil, and soil microorganisms) along an altitudinal gradient (from 50 m to 950 m a.s.l.) in subtropical China. The results showed that soil organic C and microbial biomass C concentrations increased linearly with increasing altitude. Similar trends were observed for concentrations of total soil N and microbial biomass N. In contrast, the N concentration of litter and fine roots decreased linearly with altitude. With increasing altitude, litter, fine roots, and soil C:N ratios increased linearly, while the C:N ratio of soil microbial biomass did not change significantly. Phosphorus concentration and C:P and N:P ratios of all ecosystem components generally had nonlinear relationships with altitude. Our results indicate that the altitudinal pattern of plant and soil nutrient status differs among ecosystem components and that the relative importance of P vs. N limitation for ecosystem functions and processes shifts along altitudinal gradients.

Belowground responses to elevation in a changing cloud forest

Few studies have investigated how soil fungal communities respond to elevation, especially within TMCF (tropical montane cloud forests). We used an elevation gradient in a TMCF in Costa Rica to determine how soil properties, processes, and community composition of fungi change in response to elevation and across seasons. As elevation increased, soil temperature and soil pH decreased, while soil moisture and soil C:N ratios increased with elevation. Responses of these properties varied seasonally. Fungal abundance increased with elevation during wet and dry seasons. Fungal community composition shifted in response to elevation, and to a lesser extent by season. These shifts were accompanied by varying responses of important fungal functional groups during the wet season and the relative abundance of certain fungal phyla. We suggest that elevation and the responses of certain fungal functional groups may be structuring fungal communities along this elevation gradient. TMCF are ecosystems that are rapidly changing due to climate change. Our study suggests that these changes may affect how fungal communities are structured.

Geographic, environmental and biotic sources of variation in the nutrient relations of tropical montane forests

Tropical montane forests (TMF) are associated with a widely observed suite of characteristics encompassing forest structure, plant traits and biogeochemistry. With respect to nutrient relations, montane forests are characterized by slow decomposition of organic matter, high investment in below-ground biomass and poor litter quality, relative to tropical lowland forests. However, within TMF there is considerable variation in substrate age, parent material, disturbance and species composition. Here we emphasize that many TMFs are likely to be co-limited by multiple nutrients, and that feedback among soil properties, species traits, microbial communities and environmental conditions drive forest productivity and soil carbon storage. To date, studies of the biogeochemistry of montane forests have been restricted to a few, mostly neotropical, sites and focused mainly on trees while ignoring mycorrhizas, epiphytes and microbial community structure. Incorporating the geographic, environmental and biotic variability in TMF will lead to a greater recognition of plant–soil feedbacks that are critical to understanding constraints on productivity, both under present conditions and under future climate, nitrogen-deposition and land-use scenarios.